# terms

id: GO:0032577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a linoleoyl ((9Z,12Z)-octadeca-9,12-dienoyl) group from phosphatidylcholine to an oxygen atom on a cardiolipin molecule.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-linoleoyltransferase activity","termid":"GO:0032576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"phosphatidylcholine:cardiolipin O-linoleoyltransferase activity","synonyms":[{"name":"phosphatidylcholine:cardiolipin linoleoyltransferase","type":"exact"}],"termid":"GO:0032577"}


id: PBO:0080878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPEL3 divergent transcript","termid":"PBO:0080878"}


id: PR:Q10215
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01590","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.07c","secondary_identifiers":["UniProtKB:Q10215"],"synonyms":[{"name":"Spom972h-TSTD1","type":"exact"},{"name":"rhodanese-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10215"}


id: MOD:00707
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively converts an L-tyrosine residue to a multihydroxylated L-phenylalanine","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated tyrosine","synonyms":[{"name":"HyTyr","type":"exact"}],"termid":"MOD:00707"}


id: PBO:0082325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; recruited to the GAL1-10 promoter region upon induction of transcription; similar to human TBP1","termid":"PBO:0082325"}


id: GO:0097308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a farnesol stimulus.","definition_xrefs":["GOC:di","PMID:11425711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to farnesol","termid":"GO:0097307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to farnesol","termid":"GO:0097308"}


id: GO:0005179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects; all bind receptors and trigger some biological process.","definition_xrefs":["GOC:dph","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0098772","GO:0140677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hormone activity","synonyms":[{"name":"cAMP generating peptide activity","type":"narrow"},{"name":"glycopeptide hormone","type":"narrow"},{"name":"lipopeptide hormone","type":"narrow"},{"name":"peptide hormone","type":"narrow"}],"termid":"GO:0005179"}


id: PBO:0068678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 59, pseudogene","termid":"PBO:0068678"}


id: PBO:0078671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 4-1","termid":"PBO:0078671"}


id: PBO:0038463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 3","termid":"PBO:0038463"}


id: GO:0010495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An siRNA-mediated posttranscriptional gene silencing pathway in which small interfering RNAs (siRNAs) direct the cleavage of target mRNAs, and in which the silencing signal originates in one tissue and occurs in a different tissue.","definition_xrefs":["GOC:dph","PMID:17785412","PMID:11590235","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siRNA-mediated gene silencing by mRNA destabilization","termid":"GO:0090625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"siRNA-mediated long-distance post-transcriptional gene silencing","synonyms":[{"name":"long-distance posttranscriptional gene silencing","type":"broad"},{"name":"long-distance propagation of posttranscriptional gene silencing","type":"broad"},{"name":"siRNA-mediated long-distance posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0010495"}


id: PBO:0031391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_ethanolamine","termid":"PBO:0031391"}


id: PBO:0039005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFF1 antisense RNA 1","termid":"PBO:0039005"}


id: PBO:0091462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3 H4 heterotetramer chaperone Rtt106","termid":"PBO:0091462"}


id: PBO:0013773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein Atg101","termid":"PBO:0013773"}


id: PBO:0005558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-binding dehydrogenase (predicted)","termid":"PBO:0005558"}


id: PBO:0085747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; component of the EKC/KEOPS complex with Kae1p, Cgi121p, Pcc1p, and Gon7p; Pyrococcus Bud32 ortholog functions as a P-loop ATPase rather than a protein kinase in the context of the complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; mutation is functionally complemented by human TP53RK","termid":"PBO:0085747"}


id: GO:1902097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in defense response to Gram-negative bacterium.","definition_xrefs":["PMID:17183709","GOC:TermGenie","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium (obsolete GO:1902097)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"}],"termid":"GO:1902097"}


id: GO:0039516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host enzyme activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host catalytic activity (obsolete GO:0039516)","synonyms":[{"name":"modulation of catalytic activity of host by virus","type":"exact"},{"name":"regulation by virus of host catalytic activity","type":"exact"},{"name":"regulation of host catalytic activity by virus","type":"exact"}],"termid":"GO:0039516"}


id: PBO:0053016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 4","termid":"PBO:0053016"}


id: GO:0021990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the flat, thickened layer of ectodermal cells known as the neural plate. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0878932437","GOC:cls","ISBN:0878932585","PMID:15806586","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural plate morphogenesis","termid":"GO:0001839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate formation","termid":"GO:0021990"}


id: PBO:0067663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 841, pseudogene","termid":"PBO:0067663"}


id: FYPO:0005213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which regulation of translation in response to stress is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"},{"relation_name":"is_a","term_name":"normal cellular response to stress","termid":"FYPO:0005191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000298","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal regulation of translation in response to stress during vegetative growth","synonyms":[{"name":"normal regulation of translation in response to stress during mitotic cell cycle","type":"related"},{"name":"protein synthesis after stress, normal during vegetative growth","type":"related"}],"termid":"FYPO:0005213"}


id: PBO:0083042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"De novo-originated gene from non-coding sequence; protein can suppress mating and promote vegetative growth; shortens lag phase by physically interacting with Snf1p; binds with Matalpha2p to promoters of haploid-specific genes; functions in mating and fermentation, mediates crosstalk between reproduction and vegetative growth; required for survival upon exposure to K1 killer toxin; involved in ion homeostasis","termid":"PBO:0083042"}


id: PBO:0066766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 64","termid":"PBO:0066766"}


id: PBO:0027610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-replication_origin_firing_during_mitotic_G2_phase","termid":"PBO:0027610"}


id: PBO:0070588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 54","termid":"PBO:0070588"}


id: PBO:0036264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex scaffold subunit Not1","termid":"PBO:0036264"}


id: PBO:0081511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 417","termid":"PBO:0081511"}


id: PBO:0064511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit J3","termid":"PBO:0064511"}


id: GO:1903998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eating behavior.","definition_xrefs":["GOC:TermGenie","PMID:11961051","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of feeding behavior","termid":"GO:0060259"},{"relation_name":"regulates","term_name":"eating behavior","termid":"GO:0042755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eating behavior","synonyms":[{"name":"regulation of eating behaviour","type":"exact"}],"termid":"GO:1903998"}


id: PBO:0001699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit C (predicted)","termid":"PBO:0001699"}


id: GO:1905803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["GOC:TermGenie","PMID:23721876","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to manganese ion","termid":"GO:1905802"},{"relation_name":"negatively_regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to manganese ion","synonyms":[{"name":"down regulation of cellular response to manganese","type":"exact"},{"name":"down regulation of cellular response to manganese ion","type":"exact"},{"name":"down-regulation of cellular response to manganese","type":"exact"},{"name":"down-regulation of cellular response to manganese ion","type":"exact"},{"name":"downregulation of cellular response to manganese","type":"exact"},{"name":"downregulation of cellular response to manganese ion","type":"exact"},{"name":"inhibition of cellular response to manganese","type":"narrow"},{"name":"inhibition of cellular response to manganese ion","type":"narrow"},{"name":"negative regulation of cellular response to manganese","type":"exact"}],"termid":"GO:1905803"}


id: GO:0015650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: lactate (out) + H+ (out) = lactate (in) + H+ (in).","definition_xrefs":["TC:2.A.14.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate transmembrane transporter activity","termid":"GO:0015129"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lactate:proton symporter activity","synonyms":[{"name":"lactate permease","type":"broad"},{"name":"lactate:hydrogen porter activity","type":"exact"},{"name":"lactate:hydrogen symporter activity","type":"exact"},{"name":"lactate:proton porter activity","type":"exact"}],"termid":"GO:0015650"}


id: SO:0001271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A bacterial RNA with both tRNA and mRNA like properties.","direct_ancestors":[{"relation_name":"has_quality","term_name":"tmRNA_encoding","termid":"SO:0000659"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_gene","synonyms":[{"name":"tmRNA gene","type":"exact"}],"termid":"SO:0001271"}


id: GO:1901998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a toxin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:17118486"],"gene_count":0,"genotype_count":0,"name":"obsolete toxin transport (obsolete GO:1901998)","termid":"GO:1901998"}


id: GO:0052912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanine(748) in 23S rRNA = N(1)-methylguanine(748) in 23S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N1-)-methyltransferase activity","termid":"GO:0008989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140098","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"23S rRNA (guanine(748)-N(1))-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11599","RHEA:42904"],"synonyms":[{"name":"23S rRNA m(1)G(748) methyltransferase activity","type":"broad"}],"termid":"GO:0052912"}


id: PBO:0077914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 5","termid":"PBO:0077914"}


id: RO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has disposition","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in","termid":"RO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disposition_of","termid":"RO:0000092"}


id: PBO:0084949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multigene complex, polymeric locus for maltose fermentation; encodes the MAL43 trans-acting MAL-activator, MAL41 maltose permease, and MAL42 maltase; on right arm of Chromosome XI, but not in strain S288C","termid":"PBO:0084949"}


id: null:NCBI Taxonomy id
data:
  {"annotation_feature_type":"gene","cv_name":"organism property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxon_id","termid":"null:NCBI Taxonomy id"}


id: PBO:0076667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 1","termid":"PBO:0076667"}


id: PBO:0058723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6851","termid":"PBO:0058723"}


id: GO:0099092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane forming an electron dense disc. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic density","termid":"GO:0014069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic density, intracellular component","termid":"GO:0099092"}


id: PBO:0076497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonyl-tRNA synthetase 3","termid":"PBO:0076497"}


id: GO:0071511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase in the context of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK activity involved in conjugation with cellular fusion (obsolete GO:0071511)","synonyms":[{"name":"conjugation with cellular fusion, inactivation of MAPK activity","type":"exact"},{"name":"conjugation with cellular fusion, termination of MAPK activity","type":"exact"},{"name":"inactivation of MAPK activity involved in mating response","type":"related"},{"name":"termination of MAPK activity during conjugation with cellular fusion","type":"exact"}],"termid":"GO:0071511"}


id: PBO:0090848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar proton/calcium exchanger","termid":"PBO:0090848"}


id: PBO:0055704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLPH pseudogene 3","termid":"PBO:0055704"}


id: PBO:0083162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene PSK2/YOL045W","termid":"PBO:0083162"}


id: GO:0050823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the structure and integrity of a peptide antigen and preventing it from being degraded.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide stabilization","termid":"GO:0050822"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antigen stabilization","synonyms":[{"name":"peptide antigen stabilization activity","type":"related"}],"termid":"GO:0050823"}


id: GO:0019245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D(-)-lactate from other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate biosynthetic process from pyruvate","termid":"GO:0019244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D(-)-lactate biosynthetic process from pyruvate","synonyms":[{"name":"D(-)-lactate anabolism from pyruvate","type":"exact"},{"name":"D(-)-lactate formation from pyruvate","type":"exact"},{"name":"D(-)-lactate synthesis from pyruvate","type":"exact"}],"termid":"GO:0019245"}


id: PR:P10651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:P10651","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.3 (Schizosaccharomyces pombe)","termid":"PR:000027596"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom972h-hht3","type":"exact"}],"termid":"PR:P10651"}


id: PBO:0036044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_along_microtubule_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036044"}


id: PATO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Extremely acute and aggressive onset of a pathological process.","definition_xrefs":["PATOC:PNS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute","termid":"PATO:0000389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peracute","synonyms":[{"name":"per-acute","type":"exact"}],"termid":"PATO:0002387"}


id: PBO:0085065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of the NuA4 acetyltransferase complex; Esa1p-associated factor; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085065"}


id: PBO:0080386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS13C divergent transcript","termid":"PBO:0080386"}


id: SO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polymorphic pseudogene in the reference genome, containing a retained intron, known to be intact in the genomes of other individuals of the same species. The annotation process has confirmed that the pseudogenisation event is not a genomic sequencing error.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymorphic_pseudogene","termid":"SO:0001841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_pseudogene_with_retained_intron","synonyms":[{"name":"polymorphic pseudogene with retained intron","type":"exact"}],"termid":"SO:0002110"}


id: PBO:0046769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 9","termid":"PBO:0046769"}


id: PBO:0063327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 3","termid":"PBO:0063327"}


id: GO:0002837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to tumor cell","termid":"GO:0002834"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"immune response to tumor cell","termid":"GO:0002418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immune response to tumor cell","synonyms":[{"name":"regulation of immune response to tumour cell","type":"exact"}],"termid":"GO:0002837"}


id: PBO:0008966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIb-related protein (predicted)","termid":"PBO:0008966"}


id: RO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"bearer_of","termid":"RO:0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_function","termid":"RO:0000085"}


id: FYPO:0003906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on bleomycin","synonyms":[{"name":"normal cell population growth in presence of bleomycin","type":"exact"},{"name":"normal cell population growth on bleomycin","type":"exact"},{"name":"normal cellular response to bleomycin","type":"related"},{"name":"normal vegetative cell population growth on bleomycin","type":"exact"}],"termid":"FYPO:0003906"}


id: GO:0097437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in an organism remaining in dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["GOC:PO_curators","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of dormancy","termid":"GO:0097437"}


id: GO:0015227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of acyl carnitine from one side of a membrane to the other. Acyl carnitine is the condensation product of a carboxylic acid and carnitine and is the transport form for a fatty acid crossing the mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"acyl carnitine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-200424"],"synonyms":[{"name":"acylcarnitine transporter activity","type":"broad"}],"termid":"GO:0015227"}


id: GO:0019078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A form of viral release in which the viral particles bud out through cellular membranes, resulting in cell lysis. It is also a form of viral envelopment.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete lytic viral budding (obsolete GO:0019078)","synonyms":[{"name":"lytic viral budding","type":"exact"}],"termid":"GO:0019078"}


id: PBO:0085496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteasome-binding protein; interacts physically with multiple subunits of the 20S proteasome and genetically with genes encoding 20S core particle and 19S regulatory particle subunits; exhibits boundary activity which blocks the propagation of heterochromatic silencing; contains a PI31 proteasome regulator domain and sequence similarity with human PSMF1, a proteasome inhibitor; not an essential gene","termid":"PBO:0085496"}


id: PBO:0042852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP61 antisense RNA 1","termid":"PBO:0042852"}


id: PBO:0012227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit (predicted)","termid":"PBO:0012227"}


id: PBO:0081962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida binding protein 2","termid":"PBO:0081962"}


id: PBO:0086546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR209C is not an essential gene; partially overlaps uncharacterized gene YDR210W","termid":"PBO:0086546"}


id: PBO:0053709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 917","termid":"PBO:0053709"}


id: PBO:0089784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shuttle craft like transcriptional repressor/ubiquitin-protein ligase E3","termid":"PBO:0089784"}


id: MOD:00289
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-histidine residue and a four-iron four-sulfur cluster to tris-L-cysteinyl L-N1'-histidino tetrairon tetrasulfide.","definition_xrefs":["PubMed:9836629","RESID:AA0284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl L-N1'-histidino tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); via tele nitrogen","type":"exact"},{"name":"tetra-mu3-sulfidotris(S-cysteinyliron)(N1'-histidinoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-N1'-histidino tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00289"}


id: GO:0016112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polyterpenoid compounds, terpenoids with more than eight isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyterpenoid metabolic process","termid":"GO:0016111"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"polyterpenoid biosynthetic process","synonyms":[{"name":"polyterpene biosynthesis","type":"narrow"},{"name":"polyterpene biosynthetic process","type":"narrow"},{"name":"polyterpenoid anabolism","type":"exact"},{"name":"polyterpenoid biosynthesis","type":"exact"},{"name":"polyterpenoid formation","type":"exact"},{"name":"polyterpenoid synthesis","type":"exact"}],"termid":"GO:0016112"}


id: PBO:0056782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mex-3 RNA binding family member D","termid":"PBO:0056782"}


id: GO:0044474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a voltage-gated calcium channel in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20920515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in negative regulation of calcium channel activity in another organism","termid":"GO:0044473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of voltage-gated calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044474"}


id: GO:0018934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrilotriacetate, an aminotricarboxylic acid that binds bivalent metal ions in a ratio of 1:1. As an important industrial chelating agent, NTA has been widely used for various radionuclide processing and decontamination procedures, such as textile, paper and pulp processing and water treatment.","definition_xrefs":["UM-BBD_pathwayID:nta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nitrilotriacetate metabolic process","synonyms":[{"name":"nitrilotriacetate metabolism","type":"exact"}],"termid":"GO:0018934"}


id: PBO:0011142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol-glycerol-3-phosphate3-phosphatidyltransferase (predicted)","termid":"PBO:0011142"}


id: PBO:0062163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 4 pseudogene","termid":"PBO:0062163"}


id: PBO:0050152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 8","termid":"PBO:0050152"}


id: PR:O94686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L43-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.02c","synonyms":[{"name":"L37B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl4302","type":"exact"}],"termid":"PR:O94686"}


id: GO:0010385
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to double-stranded methylated DNA. Methylation of cytosine or adenine in DNA is an important mechanism for establishing stable heritable epigenetic marks.","definition_xrefs":["GOC:imk","PMID:17242155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"double-stranded methylated DNA binding","termid":"GO:0010385"}


id: GO:0106245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-1-phosphatidylethanolamine + L-serine = L-1-phosphatidylserine + ethanolamine.","definition_xrefs":["RHEA:27606","PMID:19014349","PMID:31869331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-serine-phosphatidylethanolamine phosphatidyltransferase activity","secondary_identifiers":["EC:2.7.8.29"],"termid":"GO:0106245"}


id: PBO:0071955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 5","termid":"PBO:0071955"}


id: GO:0099559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which alignment between postsynaptic density and presynaptic active zone is maintained.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of synapse structure","termid":"GO:0099558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of alignment of postsynaptic density and presynaptic active zone","termid":"GO:0099559"}


id: GO:0106359
data:
  {"annotated_genes":["SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107943],"is_not":false,"summary":null,"term":"GO:0106359"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-hydroxy fatty acyl-CoA = a fatty aldehyde + formyl-CoA. The reaction acts on 2-hydroxy-3-methyl-branched fatty acyl-CoA and 2-hydroxy-long-chain fatty acyl-CoA.","definition_xrefs":["PMID:28289220","PMID:21708296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyacyl-CoA lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.1.2.63","MetaCyc:RXN66-471"],"termid":"GO:0106359","terms_by_termid":{"GO:0106359":null}}


id: PR:Q09725
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein mis4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.05c","synonyms":[{"name":"SCC2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mis4","type":"exact"}],"termid":"PR:Q09725"}


id: PBO:0109379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 10","termid":"PBO:0109379"}


id: PBO:0069284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 540, pseudogene","termid":"PBO:0069284"}


id: PBO:0067164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 217, pseudogene","termid":"PBO:0067164"}


id: PBO:0087700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RecQ (Sgs1p) - Topo III (Top3p) complex; stimulates superhelical relaxing, DNA catenation/decatenation and ssDNA binding activities of Top3p; involved in response to DNA damage; functions in S phase-mediated cohesion establishment via a pathway involving the Ctf18-RFC complex and Mrc1p; stimulates Top3p DNA catenation/decatenation activity; null mutants display increased rates of recombination and delayed S phase","termid":"PBO:0087700"}


id: PBO:0068347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 123","termid":"PBO:0068347"}


id: PBO:0072068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 6","termid":"PBO:0072068"}


id: SO:0001387
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified alanine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_alanine","secondary_identifiers":["MOD:00901"],"synonyms":[{"name":"ModAla","type":"exact"},{"name":"modified L alanine","type":"exact"},{"name":"modified L-alanine","type":"exact"}],"termid":"SO:0001387"}


id: PBO:0069464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 729, pseudogene","termid":"PBO:0069464"}


id: GO:0070309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a lens fiber cell are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a lens fiber cell. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"lens morphogenesis in camera-type eye","termid":"GO:0002089"},{"relation_name":"part_of","term_name":"lens fiber cell development","termid":"GO:0070307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell morphogenesis","synonyms":[{"name":"elongation of lens fiber cell","type":"narrow"},{"name":"lens fiber cell morphogenesis during differentiation","type":"exact"},{"name":"lens fibre cell morphogenesis","type":"exact"}],"termid":"GO:0070309"}


id: PBO:0044736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 4","termid":"PBO:0044736"}


id: GO:0036349
data:
  {"annotated_genes":["SJAG_00926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99675],"is_not":false,"summary":null,"term":"GO:0036349"}]},"cv_name":"biological_process","definition":"The non-sexual aggregation of single-celled organisms mediated by the binding of cell wall proteins on one cell to galactose residues on the other.","definition_xrefs":["GOC:vw","PMID:22098069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"galactose-specific flocculation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098611"],"synonyms":[{"name":"cell-cell adhesion involved in galactose-specific flocculation","type":"exact"}],"termid":"GO:0036349","terms_by_termid":{"GO:0036349":null}}


id: PBO:0030628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_trehalose_carbon_source","termid":"PBO:0030628"}


id: PBO:0088442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetohydroxyacid reductoisomerase","termid":"PBO:0088442"}


id: FYECO:0000103
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115422],"is_not":false,"summary":null,"term":"FYECO:0000103"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown in liquid culture.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00514":null},"genotype_count":1,"genotypes_by_uniquename":{"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"liquid culture","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00514"],"single_locus_genotype_uniquenames":["scd1delta"],"termid":"FYECO:0000103","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000103":null,"FYECO:0000137":null,"FYPO_EXT:0000001":null}}


id: PBO:0043635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit gamma 2","termid":"PBO:0043635"}


id: PBO:0088369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase","termid":"PBO:0088369"}


id: PBO:0048158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 4","termid":"PBO:0048158"}


id: GO:0052697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a xenobiotic substance by the conjugation of glucuronic acid. The resultant glucuronosides are often much more water-soluble than the xenobiotic precursor, enabling efficient excretion.","definition_xrefs":["PMID:20056724","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"cellular glucuronidation","termid":"GO:0052695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xenobiotic glucuronidation","synonyms":[{"name":"phase II metabolism","type":"narrow"}],"termid":"GO:0052697"}


id: PBO:0001378
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lesch-Nyhan syndrome and Kelley-Seegmiller syndrome","termid":"PBO:0001378"}


id: PBO:0058211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4503","termid":"PBO:0058211"}


id: GO:0021699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar cortex to attain its fully functional state. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GOC:cls","GO_REF:0000021","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellum maturation","termid":"GO:0021590"},{"relation_name":"part_of","term_name":"cerebellar cortex development","termid":"GO:0021695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar cortex maturation","termid":"GO:0021699"}


id: PBO:0031181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_acid_phosphatase_activity","termid":"PBO:0031181"}


id: PBO:0051083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant gamma 1 (G1m marker)","termid":"PBO:0051083"}


id: PBO:0051535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 4 induced 1","termid":"PBO:0051535"}


id: PBO:0083952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of translational elongation factor eEF1B; stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes by releasing eEF1A (Tef1p/Tef2p) from the ribosomal complex","termid":"PBO:0083952"}


id: PBO:0055078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2496","termid":"PBO:0055078"}


id: PBO:0048889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 9","termid":"PBO:0048889"}


id: GO:0070727
data:
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id: GO:0046326
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id: PBO:0064569
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id: PR:O14037
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id: FYPO:0008150
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id: GO:0005869
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id: GO:0042598
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id: GO:0043534
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id: GO:0102559
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id: FYPO:0004047
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id: GO:0097487
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded vesicle wholly contained within a multivesicular body.","definition_xrefs":["PMID:21183070","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"multivesicular body","termid":"GO:0005771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"multivesicular body, internal vesicle","termid":"GO:0097487"}


id: GO:1905854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heparan sulfate binding.","definition_xrefs":["GO_REF:0000059","PMID:7683668","GOC:aruk","GOC:bc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"},{"relation_name":"is_a","term_name":"regulation of heparan sulfate binding","termid":"GO:1905853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heparan sulfate binding","synonyms":[{"name":"down regulation of heparan sulfate binding","type":"exact"},{"name":"down-regulation of heparan sulfate binding","type":"exact"},{"name":"downregulation of heparan sulfate binding","type":"exact"},{"name":"inhibition of heparan sulfate binding","type":"narrow"}],"termid":"GO:1905854"}


id: PBO:0066047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1B pseudogene 3","termid":"PBO:0066047"}


id: PBO:0015661
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae AOS1","termid":"PBO:0015661"}


id: GO:1905471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K79 dimethylation.","definition_xrefs":["PMID:27541139","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K79 dimethylation (obsolete GO:1905471)","synonyms":[{"name":"regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"regulation of histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:1905471"}


id: FYPO:0000117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal septum assembly","secondary_identifiers":["FYPO:0000170"],"synonyms":[{"name":"abnormal division septum assembly","type":"exact"},{"name":"abnormal division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"abnormal septation","type":"broad"},{"name":"abnormal septum assembly during mitotic cell cycle","type":"related"},{"name":"abnormal septum assembly during vegetative growth","type":"exact"},{"name":"septation defects","type":"broad"},{"name":"septum formation: abnormal","type":"related"}],"termid":"FYPO:0000117"}


id: FYPO:0000517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nucleus localization is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nucleus positioning","synonyms":[{"name":"abnormal nuclear localization","type":"exact"},{"name":"abnormal nucleus localisation","type":"exact"},{"name":"abnormal nucleus localization","type":"exact"}],"termid":"FYPO:0000517"}


id: PBO:0057674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1265","termid":"PBO:0057674"}


id: PBO:0018287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein involved in ER membrane tethering","termid":"PBO:0018287"}


id: PBO:0029872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation","termid":"PBO:0029872"}


id: PBO:0027821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_single-stranded_DNA_binding","termid":"PBO:0027821"}


id: PBO:0075139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPA1 pseudogene 1","termid":"PBO:0075139"}


id: PBO:0038629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACKR4 pseudogene 1","termid":"PBO:0038629"}


id: PBO:0053645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 693","termid":"PBO:0053645"}


id: GO:0010919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of inositol phosphate biosynthetic process","synonyms":[{"name":"regulation of inositol phosphate biosynthesis","type":"exact"}],"termid":"GO:0010919"}


id: GO:0008692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxybutanoyl-CoA = (R)-3-hydroxybutanoyl-CoA.","definition_xrefs":["EC:5.1.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA epimerase activity","secondary_identifiers":["MetaCyc:OHBUTYRYL-COA-EPIM-RXN","RHEA:21760"],"synonyms":[{"name":"3-hydroxyacyl-CoA epimerase activity","type":"related"},{"name":"3-hydroxybutanoyl-CoA 3-epimerase activity","type":"related"},{"name":"3-hydroxybutyryl coenzyme A epimerase activity","type":"related"}],"termid":"GO:0008692"}


id: PBO:0061267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA alternative splicing regulator 1","termid":"PBO:0061267"}


id: GO:0140603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + H+ Pi. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP hydrolysis activity (obsolete GO:0140603)","termid":"GO:0140603"}


id: PBO:0078141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 20","termid":"PBO:0078141"}


id: PBO:0084389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity vacuolar phosphate transporter; exports phosphate from the vacuolar lumen to the cytosol; regulates phosphate and polyphosphate metabolism; acts upstream of Pho81p in regulation of the PHO pathway; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs); deletion of pho84, pho87, pho89, pho90, and pho91 causes synthetic lethality; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth","termid":"PBO:0084389"}


id: PATO:0001929
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits shape variation or change.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of shape","termid":"PATO:0001929"}


id: PR:O74304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- win1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase win1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.09","synonyms":[{"name":"Spom972h-win1","type":"exact"}],"termid":"PR:O74304"}


id: PBO:0005122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex non-SMC subunit Cnd2","termid":"PBO:0005122"}


id: GO:0072659
data:
  {"annotated_genes":["SJAG_04923","SJAG_04565","SJAG_02583","SJAG_04609","SJAG_04930","SJAG_00379","SJAG_02912","SJAG_03756","SJAG_03970","SJAG_03838","SJAG_04158","SJAG_03915","SJAG_03029","SJAG_04434","SJAG_00858","SJAG_04597","SJAG_00144","SJAG_02231","SJAG_02282","SJAG_03810","SJAG_00030","SJAG_00916","SJAG_03453","SJAG_02177","SJAG_02392","SJAG_01114","SJAG_00330","SJAG_01516","SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67398,85682,86698,86994,97512,111058,114541],"is_not":false,"summary":null,"term":"GO:0072659"},{"annotations":[108894,88408,97247,109117,103476,114950,91024,114573,87422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[91853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061951"},{"annotations":[87303,103150,105695,94838,91277,102511,109119,103254,104905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[84262],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[90539],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[91984],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903077"},{"annotations":[100754],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903078"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00144":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02231":null,"SJAG_02282":null,"SJAG_02392":null,"SJAG_02583":null,"SJAG_02912":null,"SJAG_03029":null,"SJAG_03453":null,"SJAG_03756":null,"SJAG_03810":null,"SJAG_03838":null,"SJAG_03915":null,"SJAG_03970":null,"SJAG_04158":null,"SJAG_04434":null,"SJAG_04565":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04923":null,"SJAG_04930":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0090002","GO:0072661"],"synonyms":[{"name":"protein localisation in plasma membrane","type":"related"},{"name":"protein localization in plasma membrane","type":"related"},{"name":"protein targeting to plasma membrane","type":"related"},{"name":"protein-plasma membrane targeting","type":"related"}],"termid":"GO:0072659","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0061951":null,"GO:0072659":null,"GO:0099638":null,"GO:0140325":null,"GO:1903077":null,"GO:1903078":null}}


id: PBO:0074275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLFNL1 antisense RNA 1","termid":"PBO:0074275"}


id: PBO:0110486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF10 pseudogene 2","termid":"PBO:0110486"}


id: PBO:0070245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 186 pseudogene","termid":"PBO:0070245"}


id: PBO:0048869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA4 antisense RNA 1","termid":"PBO:0048869"}


id: PBO:0058637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6769a","termid":"PBO:0058637"}


id: PBO:0082103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA ATPase with protein-unfoldase activity; subunit of polyUb-selective segregase complex involved in ERAD, INM-associated degradation (INMAD), mitotic spindle disassembly, macroautophagy, PMN, ribosome-associated degradation, ribophagy, homotypic ER membrane fusion, SCF complex disassembly, cell wall integrity, and telomerase regulation; mobilizes membrane-anchored transcription factors by regulated Ub/proteasome-dependent processing (RUP); human ortholog VCP complements a cdc48 mutant","termid":"PBO:0082103"}


id: FYPO:0000356
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115605],"is_not":false,"summary":null,"term":"FYPO:0000356"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of lipid droplets is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal lipid droplet organization","termid":"FYPO:0000808"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal lipid droplet morphology","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal lipid droplet morphology during mitotic cell cycle","type":"related"},{"name":"abnormal lipid droplet morphology during vegetative growth","type":"exact"},{"name":"abnormal lipid particle morphology","type":"exact"},{"name":"lipid particle morphology: abnormal","type":"related"}],"termid":"FYPO:0000356","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0000356":null,"FYPO_EXT:0000001":null}}


id: PBO:0089892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sugar transporter family","termid":"PBO:0089892"}


id: PBO:0042091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 160","termid":"PBO:0042091"}


id: PBO:0045133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 3","termid":"PBO:0045133"}


id: PBO:0058635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6767","termid":"PBO:0058635"}


id: GO:0035679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when an anterior lateral line neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["ISBN:0125296509","ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell morphogenesis","termid":"GO:0035678"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast hair cell development","termid":"GO:0035676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast hair cell morphogenesis","termid":"GO:0035679"}


id: PBO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial citrate transporter (predicted)","termid":"PBO:0002336"}


id: _global:assayed_using
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and an entity, such as a gene product that acts as an enzyme or substrate, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_using","termid":"_global:assayed_using"}


id: GO:0080089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a sinapoyl group to a nitrogen atom on a sinapoyl spermidine molecule resulting in the formation of a disinapoyl spermidine derivative.","definition_xrefs":["PMID:19168716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity","termid":"GO:0080089"}


id: PATO:0025000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to being fit to be used as a safe means of hydration.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Drinking_water"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potability","synonyms":[{"name":"drinkability","type":"exact"}],"termid":"PATO:0025000"}


id: GO:0090091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix disassembly","termid":"GO:0010715"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix organization","termid":"GO:1903055"},{"relation_name":"positively_regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix disassembly","termid":"GO:0090091"}


id: PBO:0057019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 106b","termid":"PBO:0057019"}


id: SO:0000813
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA invalidated clone by partial processing.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_partial_processing","termid":"SO:0000416"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially_processed_cDNA_clone","synonyms":[{"name":"partially processed cDNA clone","type":"exact"}],"termid":"SO:0000813"}


id: PBO:0063599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 12","termid":"PBO:0063599"}


id: PBO:0047469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like B","termid":"PBO:0047469"}


id: GO:0090576
data:
  {"annotated_genes":["SJAG_03120","SJAG_00421","SJAG_01827","SJAG_02815","SJAG_03354","SJAG_03007","SJAG_00585","SJAG_05339","SJAG_03546"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112314,99184,91711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000126"},{"annotations":[84359,111462,105243,103029,108756,95696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000127"}]},"cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase III.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00585":null,"SJAG_01827":null,"SJAG_02815":null,"SJAG_03007":null,"SJAG_03120":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase III transcription regulator complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase III transcription factor complex","type":"narrow"}],"termid":"GO:0090576","terms_by_termid":{"GO:0000126":null,"GO:0000127":null}}


id: GO:2000440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of toll-like receptor 15 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 15 signaling pathway","termid":"GO:0035681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 15 signaling pathway","synonyms":[{"name":"regulation of TLR15 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 15 signalling pathway","type":"exact"}],"termid":"GO:2000440"}


id: PBO:0071805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2","termid":"PBO:0071805"}


id: PBO:0109024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA1 neighbor of OC90","termid":"PBO:0109024"}


id: GO:0032592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mitochondrial membrane (obsolete GO:0032592)","synonyms":[{"name":"integral to mitochondrial membrane","type":"narrow"}],"termid":"GO:0032592"}


id: GO:0086067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between an AV node cell and its surroundings that contributes to the process of the AV node cell communicating with a bundle of His cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"AV node cell to bundle of His cell communication","synonyms":[{"name":"atrioventricular node cell to bundle of His cell communication","type":"exact"}],"termid":"GO:0086067"}


id: PBO:0000799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc3 (predicted)","termid":"PBO:0000799"}


id: GO:0018136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reduction of a peptide-linked thiazoline to thiazole.","definition_xrefs":["GOC:mah","PMID:19058272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"peptidyl-thiazoline dehydrogenase activity","termid":"GO:0018136"}


id: PBO:0083767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential non-ATPase regulatory subunit of the 26S proteasome; has similarity to the human p40 proteasomal subunit and to another S. cerevisiae regulatory subunit, Rpn11p","termid":"PBO:0083767"}


id: PBO:0046684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1 pseudogene 2","termid":"PBO:0046684"}


id: PBO:0059621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 2","termid":"PBO:0059621"}


id: FYPO:0006276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyorrhexis, the nuclear fragmentation typical of cell death by apoptosis, occurs at a greater frequency than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah","GO:0097194","PMID:18653539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased karyorrhexis during stationary phase","synonyms":[{"name":"fragmented nuclear envelope during stationary phase entry","type":"related"},{"name":"increased apoptotic nuclear fragmentation during stationary phase","type":"exact"}],"termid":"FYPO:0006276"}


id: SO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fusion gene that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"engineered_gene","termid":"SO:0000280"},{"relation_name":"is_a","term_name":"fusion_gene","termid":"SO:0000287"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_fusion_gene","synonyms":[{"name":"engineered fusion gene","type":"exact"}],"termid":"SO:0000288"}


id: GO:0007167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["ISBN:0815316194","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"enzyme-linked receptor protein signaling pathway","synonyms":[{"name":"enzyme linked receptor protein signaling pathway","type":"exact"},{"name":"enzyme linked receptor protein signalling pathway","type":"exact"}],"termid":"GO:0007167"}


id: GO:0050405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + [acetyl-CoA carboxylase] = ADP + [acetyl-CoA carboxylase] phosphate.","definition_xrefs":["MetaCyc:[ACETYL-COA-CARBOXYLASE]-KINASE-RXN","EC:2.7.11.27"],"gene_count":0,"genotype_count":0,"name":"obsolete [acetyl-CoA carboxylase] kinase activity (obsolete GO:0050405)","synonyms":[{"name":"ACK2","type":"related"},{"name":"ACK3","type":"related"},{"name":"AMPK","type":"related"},{"name":"ATP:acetyl-CoA carboxylase phosphotransferase activity","type":"related"},{"name":"I-peptide kinase activity","type":"narrow"},{"name":"STK5","type":"related"},{"name":"acetyl coenzyme A carboxylase kinase (phosphorylating) activity","type":"related"},{"name":"acetyl-CoA carboxylase bound kinase activity","type":"narrow"},{"name":"acetyl-CoA carboxylase kinase (AMP-activated) activity","type":"related"},{"name":"acetyl-CoA carboxylase kinase (cAMP-independent) activity","type":"related"},{"name":"acetyl-CoA carboxylase kinase 2 activity","type":"narrow"},{"name":"acetyl-CoA carboxylase kinase activity","type":"related"},{"name":"acetyl-CoA carboxylase kinase-2 activity","type":"narrow"},{"name":"acetyl-CoA carboxylase kinase-3 (AMP-activated) activity","type":"narrow"},{"name":"acetyl-coenzyme A carboxylase kinase activity","type":"related"}],"termid":"GO:0050405"}


id: GO:0120149
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small host cell organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.","definition_xrefs":["PMID:9302272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell peroxisome","synonyms":[{"name":"host peroxisome","type":"exact"}],"termid":"GO:0120149"}


id: GO:0005111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 fibroblast growth factor receptor (FGFR2).","definition_xrefs":["GOC:fb_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor binding","termid":"GO:0005104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 2 fibroblast growth factor receptor binding","synonyms":[{"name":"FGFR2 binding","type":"exact"},{"name":"FGFR2 ligand","type":"narrow"},{"name":"heartless binding","type":"exact"},{"name":"heartless ligand","type":"narrow"},{"name":"type 2 fibroblast growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005111"}


id: GO:0008341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a mature individual as the result of a cocaine stimulus. As in, but not restricted to, the true insects (Insecta, ncbi_taxonomy_id:50557).","definition_xrefs":["GOC:go_curators","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete response to cocaine (sensu Insecta) (obsolete GO:0008341)","synonyms":[{"name":"response to cocaine (sensu Insecta)","type":"exact"}],"termid":"GO:0008341"}


id: PBO:0066854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 154","termid":"PBO:0066854"}


id: PBO:0058121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4423","termid":"PBO:0058121"}


id: PBO:0057777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2392","termid":"PBO:0057777"}


id: GO:0016513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex that contains an alpha subunit (Runx1, Runx2 or Runx3 in human) that binds DNA and a non-DNA-binding beta subunit (CBFbeta), and binds to a consensus sequence 5'-YGYGGTY-3' found in several enhancers and promoters; the beta subunit enhances the DNA binding of the alpha subunit.","definition_xrefs":["PMID:15156179","PMID:8497254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"core-binding factor complex","synonyms":[{"name":"AML1 complex","type":"narrow"},{"name":"CBF complex","type":"exact"},{"name":"PEPB2 complex","type":"narrow"}],"termid":"GO:0016513"}


id: GO:0010903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle remodeling","termid":"GO:0010901"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"negative regulation of VLDL remodeling","type":"exact"},{"name":"negative regulation of VLDL remodelling","type":"exact"},{"name":"negative regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010903"}


id: PBO:0038297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_throughput_type","termid":"PBO:0038297"}


id: PBO:0027568
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-aseptate_mononucleate_vegetative_cell","termid":"PBO:0027568"}


id: PBO:0077428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 165","termid":"PBO:0077428"}


id: MOD:01808
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-leucine alpha amino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated leucine","termid":"MOD:00662"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated leucine","synonyms":[{"name":"MeLeu","type":"exact"}],"termid":"MOD:01808"}


id: PBO:0056567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipin TRP cation channel 2","termid":"PBO:0056567"}


id: FYPO:0001672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a GTPase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal GTPase activity","termid":"FYPO:0001672"}


id: PBO:0083983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine-fructose-6-phosphate amidotransferase; catalyzes the formation of glucosamine-6-P and glutamate from fructose-6-P and glutamine in the first step of chitin biosynthesis; GFA1 has a paralogous region, comprising ORFs YMR084W-YMR085W, that arose from the whole genome duplication","termid":"PBO:0083983"}


id: GO:0044848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A distinct period or stage in a biological process or cycle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological phase","termid":"GO:0044848"}


id: PBO:0113363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates the vacuolar V-ATPase; regulates the assembly state of the V-ATPase holoenzyme, promoting complex disassembly, and counteracting the function of the RAVE complex; interacts with V-ATPase subunits; vacuolar membrane localization requires N-myristoylation and an assembled V-ATPase; GFP-fusion protein localizes to the cytoplasm; null mutation suppresses cdc13-1 temperature sensitivity; member of a conserved family of TLDc domain proteins found in eukaryotes","termid":"PBO:0113363"}


id: PBO:0083371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps verified ORF YCL005W-A; mutations in YCL007C were thought to confer sensitivity to calcofluor white, but this phenotype was later shown to be due to the defect in YCL005W-A","termid":"PBO:0083371"}


id: PBO:0047362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 16","termid":"PBO:0047362"}


id: GO:0045206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAPK phosphatase into, out of or within a cell, or between cells.","definition_xrefs":["GOC:ebc","GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK phosphatase transporter activity (obsolete GO:0045206)","synonyms":[{"name":"MAPK phosphatase transporter activity","type":"exact"},{"name":"MKP shuttle","type":"narrow"},{"name":"leptomycin B-sensitive MAPK phosphatase transporter activity","type":"narrow"},{"name":"leptomycin B-sensitive MKP shuttle","type":"narrow"}],"termid":"GO:0045206"}


id: GO:0045290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose + NAD(P)+ = D-arabinono-1,4-lactone + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-arabinose 1-dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:1.1.1.117-RXN"],"synonyms":[{"name":"D-arabinose:NAD(P)+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0045290"}


id: GO:0070409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carbamoyl phosphate, an intermediate in the urea cycle and other nitrogen compound metabolic pathways.","definition_xrefs":["GOC:mah","GOC:rph","CHEBI:17672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbamoyl phosphate metabolic process","termid":"GO:0070408"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbamoyl phosphate biosynthetic process","synonyms":[{"name":"carbamoyl phosphate anabolism","type":"exact"},{"name":"carbamoyl phosphate biosynthesis","type":"exact"},{"name":"carbamoyl phosphate formation","type":"exact"},{"name":"carbamoyl phosphate synthesis","type":"exact"},{"name":"carbamyl phosphate biosynthetic process","type":"exact"}],"termid":"GO:0070409"}


id: MOD:00286
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["Unimod:424#C","RESID:AA0281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin guanine dinucleotide","termid":"MOD:01167"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-cystein-S-yl-molybdenum","type":"exact"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"}],"termid":"MOD:00286"}


id: PBO:0031402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_polarity","termid":"PBO:0031402"}


id: PBO:0041655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 1","termid":"PBO:0041655"}


id: PBO:0078523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 14","termid":"PBO:0078523"}


id: GO:0071602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytosphingosine, (2S,3S,4R)-2-aminooctadecane-1,3,4-triol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytosphingosine metabolic process","termid":"GO:0006671"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"sphingoid biosynthetic process","termid":"GO:0046520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"phytosphingosine biosynthetic process","synonyms":[{"name":"phytosphingosine anabolism","type":"exact"},{"name":"phytosphingosine biosynthesis","type":"exact"},{"name":"phytosphingosine formation","type":"exact"},{"name":"phytosphingosine synthesis","type":"exact"}],"termid":"GO:0071602"}


id: GO:2000671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of motor neuron apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"regulates","term_name":"motor neuron apoptotic process","termid":"GO:0097049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of motor neuron apoptotic process","synonyms":[{"name":"regulation of motoneuron apoptosis","type":"exact"},{"name":"regulation of motor neuron apoptosis","type":"narrow"}],"termid":"GO:2000671"}


id: PBO:0084839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; also involved in homologous recombination in mitochondria; required for recombination-dependent mtDNA partitioning; involved in stimulation of mitochondrial DNA replication in response to oxidative stress","termid":"PBO:0084839"}


id: GO:0039570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT2 (signal transducer and activator of transcription-2) activity by retaining STAT2 in the cytoplasm, so STAT2 is unable to translocate to the nucleus to activate transcription of its target genes.","definition_xrefs":["PMID:14557668"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT2 activity by negative regulation of STAT protein import into nucleus (obsolete GO:0039570)","synonyms":[{"name":"cytoplasmic sequestering of STAT2","type":"exact"},{"name":"cytoplasmic sequestration of STAT2","type":"exact"}],"termid":"GO:0039570"}


id: PR:O13896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11239:SF2","OMA:SCHPO00468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit RPC10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.05","secondary_identifiers":["UniProtKB:O13896"],"synonyms":[{"name":"DNA-directed RNA polymerases III 12.5 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3K","type":"exact"}],"termid":"PR:O13896"}


id: GO:0106265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 H+ + hexanoyl-CoA + 3 malonyl-CoA = 2,4,6-trihydroxyphenylhexan-1-one + 3 CO2 + 4 CoA.","definition_xrefs":["RHEA:64352","PMID:9446571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"THPH synthase activity","synonyms":[{"name":"polyketide syntase","type":"broad"}],"termid":"GO:0106265"}


id: PBO:0052845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-1","termid":"PBO:0052845"}


id: PBO:0028126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_frequency_of_conjugation_with_h+_cells","termid":"PBO:0028126"}


id: PBO:0068239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal N5","termid":"PBO:0068239"}


id: PBO:0029755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_modification","termid":"PBO:0029755"}


id: PBO:0004124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein Mug164","termid":"PBO:0004124"}


id: PBO:0029881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_methylated_histone_residue_binding","termid":"PBO:0029881"}


id: GO:0050238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + acceptor = isopyridoxal + reduced acceptor.","definition_xrefs":["MetaCyc:PYRIDOXINE-5-DEHYDROGENASE-RXN","EC:1.1.99.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pyridoxine 5-dehydrogenase activity","secondary_identifiers":["RHEA:14497"],"synonyms":[{"name":"pyridoxal-5-dehydrogenase activity","type":"related"},{"name":"pyridoxin 5-dehydrogenase activity","type":"related"},{"name":"pyridoxine 5'-dehydrogenase activity","type":"related"},{"name":"pyridoxine:(acceptor) 5-oxidoreductase activity","type":"related"},{"name":"pyridoxine:acceptor 5-oxidoreductase activity","type":"related"},{"name":"pyridoxol 5-dehydrogenase activity","type":"related"}],"termid":"GO:0050238"}


id: PBO:0110157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRM RNA binding protein involved in snRNA processing Thc1","termid":"PBO:0110157"}


id: GO:0036088
data:
  {"annotated_genes":["SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83771],"is_not":false,"summary":null,"term":"GO:0036088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-serine, the D-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-serine metabolic process","termid":"GO:0070178"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"D-serine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-serine breakdown","type":"exact"},{"name":"D-serine catabolism","type":"exact"},{"name":"D-serine degradation","type":"exact"}],"termid":"GO:0036088","terms_by_termid":{"GO:0036088":null}}


id: PATO:0000898
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000898 intercross fertility value (obsolete PATO:0000898)","termid":"PATO:0000898"}


id: GO:0003133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from endodermal cells to mesodermal cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endodermal-mesodermal cell signaling","synonyms":[{"name":"endodermal-mesodermal cell signalling","type":"exact"}],"termid":"GO:0003133"}


id: GO:0034765
data:
  {"annotated_genes":["SJAG_04551","SJAG_00296","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109472,87351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[98265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ion membrane transport","type":"exact"},{"name":"regulation of ion transmembrane transport","type":"broad"},{"name":"regulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034765","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: PBO:0070451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 8","termid":"PBO:0070451"}


id: GO:0075275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the development of a telium, which is a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telium development","termid":"GO:0075275"}


id: GO:0060873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progession of the anterior semicircular canal from its initial formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semicircular canal development","termid":"GO:0060872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior semicircular canal development","termid":"GO:0060873"}


id: PBO:0012294
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation impaired","termid":"PBO:0012294"}


id: GO:0009433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic ring located at the base of the bacterial-type flagellar basal body; acts as a rotor; includes three switch proteins, which generate torque and can change their conformational state in a bimodal fashion, so that the motor direction can switch between clockwise and counterclockwise.","definition_xrefs":["PMID:10572114","GOC:cilia","PMID:12624192","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body","termid":"GO:0009425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, C ring","synonyms":[{"name":"flagellar basal body, C ring","type":"exact"},{"name":"flagellin-based flagellum basal body, C ring","type":"exact"}],"termid":"GO:0009433"}


id: PBO:0034236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tracheates","termid":"PBO:0034236"}


id: PBO:0069805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1091, pseudogene","termid":"PBO:0069805"}


id: GO:0046916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of a steady state level of transition metal ions within a cell. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular transition metal ion homeostasis (obsolete GO:0046916)","synonyms":[{"name":"cellular transition metal ion homeostasis","type":"exact"}],"termid":"GO:0046916"}


id: PBO:0016954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide exchange factor for the ER lumenal Hsp70 chaperone, Sil1 (predicted)","termid":"PBO:0016954"}


id: PBO:0075883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 beta-galactoside alpha-2,6-sialyltransferase 1","termid":"PBO:0075883"}


id: PBO:0059329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S5 pseudogene 3","termid":"PBO:0059329"}


id: GO:0045137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary sexual characteristics over time, from their formation to the mature structures. The primary sexual characteristics are the testes in males and the ovaries in females and they develop in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of primary sexual characteristics","termid":"GO:0045137"}


id: GO:0016466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in archae.","definition_xrefs":["TC:3.A.2.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating A-type ATPase activity (obsolete GO:0016466)","synonyms":[{"name":"hydrogen-translocating A-type ATPase activity","type":"exact"},{"name":"proton-translocating A-type ATPase activity","type":"exact"}],"termid":"GO:0016466"}


id: PBO:0051014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 1","termid":"PBO:0051014"}


id: PBO:0084580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL003W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCL004w","termid":"PBO:0084580"}


id: PBO:0061586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin G1","termid":"PBO:0061586"}


id: GO:0015658
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98923,106137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"}]},"cv_name":"molecular_function","definition":"Enables the transfer of branched-chain amino acids from one side of a membrane to the other. Branched-chain amino acids are amino acids with a branched carbon skeleton without rings.","definition_xrefs":["GOC:ai","GOC:bf","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"branched-chain amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9672770","GO:1901240"],"synonyms":[{"name":"branched-chain aliphatic amino acid transmembrane transporter activity","type":"exact"},{"name":"branched-chain aliphatic amino acid transporter activity","type":"exact"},{"name":"leucine/valine/isoleucine permease activity","type":"related"},{"name":"valine/tyrosine/tryptophan permease activity","type":"related"}],"termid":"GO:0015658","terms_by_termid":{"GO:0015188":null}}


id: PBO:0075367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX5 pseudogene 1","termid":"PBO:0075367"}


id: PBO:0043853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular retinoic acid binding protein 2","termid":"PBO:0043853"}


id: PBO:0071535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a","termid":"PBO:0071535"}


id: PBO:0111786
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAT domain","termid":"PBO:0111786"}


id: _global:function_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"characteristic_of","termid":"_global:characteristic_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function_of","secondary_identifiers":["RO:0000079"],"termid":"_global:function_of"}


id: PBO:0051366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-34 (pseudogene)","termid":"PBO:0051366"}


id: PBO:0088347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate semialdehyde dehydrogenase Hom2","termid":"PBO:0088347"}


id: SO:0001247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of synthetic nucleotides.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthetic_oligo","synonyms":[{"name":"synthetic oligo","type":"exact"}],"termid":"SO:0001247"}


id: PBO:0065562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 2","termid":"PBO:0065562"}


id: PBO:0070113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 27 pseudogene","termid":"PBO:0070113"}


id: GO:1903799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microRNA processing.","definition_xrefs":["GOC:rph","PMID:22269326","GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of miRNA-mediated gene silencing","termid":"GO:0060965"},{"relation_name":"is_a","term_name":"regulation of miRNA processing","termid":"GO:1903798"},{"relation_name":"negatively_regulates","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA processing","synonyms":[{"name":"down regulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"down regulation of miRNA biogenesis","type":"related"},{"name":"down regulation of miRNA processing","type":"exact"},{"name":"down regulation of miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"down regulation of microRNA biogenesis","type":"related"},{"name":"down regulation of microRNA biosynthesis","type":"related"},{"name":"down regulation of microRNA biosynthetic process","type":"related"},{"name":"down regulation of microRNA metabolic process","type":"related"},{"name":"down regulation of microRNA metabolism","type":"related"},{"name":"down regulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"down regulation of production of miRNAs involved in gene silencing by miRNA","type":"exact"},{"name":"down regulation of production of microRNAs involved in gene silencing by microRNA","type":"exact"},{"name":"down-regulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"down-regulation of miRNA biogenesis","type":"related"},{"name":"down-regulation of miRNA processing","type":"exact"},{"name":"down-regulation of miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"down-regulation of microRNA biogenesis","type":"related"},{"name":"down-regulation of microRNA biosynthesis","type":"related"},{"name":"down-regulation of microRNA biosynthetic process","type":"related"},{"name":"down-regulation of microRNA metabolic process","type":"related"},{"name":"down-regulation of microRNA metabolism","type":"related"},{"name":"down-regulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"down-regulation of production of miRNAs involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of production of microRNAs involved in gene silencing by microRNA","type":"exact"},{"name":"downregulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"downregulation of miRNA biogenesis","type":"related"},{"name":"downregulation of miRNA processing","type":"exact"},{"name":"downregulation of miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"downregulation of microRNA biogenesis","type":"related"},{"name":"downregulation of microRNA biosynthesis","type":"related"},{"name":"downregulation of microRNA biosynthetic process","type":"related"},{"name":"downregulation of microRNA metabolic process","type":"related"},{"name":"downregulation of microRNA metabolism","type":"related"},{"name":"downregulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"downregulation of production of miRNAs involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of production of microRNAs involved in gene silencing by microRNA","type":"exact"},{"name":"inhibition of gene silencing by miRNA, production of miRNAs","type":"narrow"},{"name":"inhibition of miRNA biogenesis","type":"related"},{"name":"inhibition of miRNA processing","type":"narrow"},{"name":"inhibition of miRNA-mediated gene silencing, production of miRNAs","type":"narrow"},{"name":"inhibition of microRNA biogenesis","type":"related"},{"name":"inhibition of microRNA biosynthesis","type":"related"},{"name":"inhibition of microRNA biosynthetic process","type":"related"},{"name":"inhibition of microRNA metabolic process","type":"related"},{"name":"inhibition of microRNA metabolism","type":"related"},{"name":"inhibition of microRNA-mediated gene silencing, production of microRNAs","type":"narrow"},{"name":"inhibition of production of miRNAs involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of production of microRNAs involved in gene silencing by microRNA","type":"narrow"},{"name":"negative regulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"negative regulation of miRNA biogenesis","type":"related"},{"name":"negative regulation of miRNA maturation","type":"narrow"},{"name":"negative regulation of miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"negative regulation of microRNA biogenesis","type":"related"},{"name":"negative regulation of microRNA biosynthesis","type":"related"},{"name":"negative regulation of microRNA biosynthetic process","type":"related"},{"name":"negative regulation of microRNA metabolic process","type":"related"},{"name":"negative regulation of microRNA metabolism","type":"related"},{"name":"negative regulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"negative regulation of production of miRNAs involved in gene silencing by miRNA","type":"related"},{"name":"negative regulation of production of microRNAs involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:1903799"}


id: PBO:0040847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 2","termid":"PBO:0040847"}


id: PBO:0084757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix protein involved in Fe-S cluster biogenesis; facilitates [4Fe-2S] cluster inception into mitochondrial proteins such as lipoate synthase and succinate dehydrogenase; interacts and may function with Grx5p at an early step in Fe-S cluster biosynthesis; forms dimeric complexes with Grx5p and Nfu1p that alter the stability of shared Fe/S clusters; sequence similarity to human BOLA family member, BOLA1 and S. pombe uvi31, a putative DNA repair protein","termid":"PBO:0084757"}


id: PBO:0003262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc25 family phosphatase Ibp1","termid":"PBO:0003262"}


id: GO:1900161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipid scramblase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"regulation of lipid transporter activity","termid":"GO:0110112"},{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of phospholipid scramblase activity","termid":"GO:1900161"}


id: PBO:0063120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 4 pseudogene 2","termid":"PBO:0063120"}


id: PBO:0011481
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defect of the gene silencing at centromeric heterochromatin","termid":"PBO:0011481"}


id: PBO:0055599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3035","termid":"PBO:0055599"}


id: PBO:0076144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 3","termid":"PBO:0076144"}


id: PBO:0063766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate regulating endopeptidase X-linked","termid":"PBO:0063766"}


id: PBO:0056235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI2 antisense RNA 2","termid":"PBO:0056235"}


id: GO:0071816
data:
  {"annotated_genes":["SJAG_01178","SJAG_01940","SJAG_01240"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84120,107110,110235],"is_not":false,"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"A process of protein insertion into the endoplasmic reticulum (ER) membrane in which a tail-anchored (TA) transmembrane protein is incorporated into an endoplasmic reticulum (ER) membrane. TA transmembrane protein, also named type II transmembrane proteins, contain a single C- terminal transmembrane region.","definition_xrefs":["GOC:mah","GOC:sp","PMID:20676083","PMID:20516149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into ER membrane","termid":"GO:0045048"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01178":null,"SJAG_01240":null,"SJAG_01940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"tail-anchored membrane protein insertion into ER membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein insertion of tail-anchored membrane proteins into ER membrane","type":"exact"},{"name":"tail-anchored membrane protein insertion into endoplasmic reticulum membrane","type":"exact"},{"name":"type II transmembrane protein insertion into ER membrane","type":"exact"}],"termid":"GO:0071816","terms_by_termid":{"GO:0071816":null}}


id: PBO:0045170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 4","termid":"PBO:0045170"}


id: GO:0031246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products that that penetrate the periplasmic side of the cell outer membrane only, either directly or via some covalently attached hydrophobic anchor.","definition_xrefs":["GOC:dos","GOC:mtg_sensu","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of periplasmic side of cell outer membrane (obsolete GO:0031246)","synonyms":[{"name":"intrinsic to external side of cell outer membrane","type":"narrow"},{"name":"intrinsic to internal leaflet of cell outer membrane","type":"exact"},{"name":"intrinsic to internal side of cell outer membrane","type":"exact"},{"name":"intrinsic to internal side of outer membrane","type":"exact"}],"termid":"GO:0031246"}


id: GO:0032625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-21 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-21 production","secondary_identifiers":["GO:0042238","GO:0072619"],"synonyms":[{"name":"IL-21 production","type":"exact"},{"name":"interleukin-21 biosynthetic process","type":"narrow"},{"name":"interleukin-21 secretion","type":"narrow"}],"termid":"GO:0032625"}


id: PBO:0088069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; removes ubiquitin from ubiquitinated proteins; controls K63 homeostasis during oxidative stress; deubiquitinates Rsp5p and is required for MVB sorting of membrane proteins; can cleave polyubiquitin and has isopeptidase activity","termid":"PBO:0088069"}


id: GO:1903184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-dopa.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:8822146","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-dopa metabolic process","synonyms":[{"name":"L-dopa metabolism","type":"exact"}],"termid":"GO:1903184"}


id: PBO:0042202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G2","termid":"PBO:0042202"}


id: PBO:0063269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 15","termid":"PBO:0063269"}


id: PBO:0087975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Triose phosphate isomerase, abundant glycolytic enzyme; mRNA half-life is regulated by iron availability; transcription is controlled by activators Reb1p, Gcr1p, and Rap1p through binding sites in the 5' non-coding region; inhibition of Tpi1p activity by PEP (phosphoenolpyruvate) stimulates redox metabolism in respiring cells; E104D mutation in human homolog TPI1 causes a rare autosomal disease; human TPI1 can complement yeast null mutant","termid":"PBO:0087975"}


id: FYPO:0001060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutamate into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutamate import during vegetative growth","termid":"FYPO:0001059"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"decreased glutamate import","termid":"FYPO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased glutamate import during vegetative growth","synonyms":[{"name":"decreased L-glutamate import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased L-glutamate import during vegetative growth","type":"exact"},{"name":"decreased glutamate import during mitotic cell cycle","type":"related"},{"name":"decreased glutamate import into cell during vegetative growth","type":"exact"},{"name":"decreased glutamate uptake during vegetative growth","type":"exact"},{"name":"reduced glutamate import during vegetative growth","type":"exact"}],"termid":"FYPO:0001060"}


id: GO:0050904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The passage of a leukocyte between the tight junctions of endothelial cells lining blood vessels, typically the fourth and final step of cellular extravasation.","definition_xrefs":["ISBN:0781735149","PMID:7507411","PMID:14680625","PMID:14708592","PMID:8600538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diapedesis","termid":"GO:0050904"}


id: PR:O43020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02505","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S16, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.06","secondary_identifiers":["UniProtKB:O43020"],"synonyms":[{"name":"Spom972h-rpsP","type":"exact"}],"termid":"PR:O43020"}


id: PBO:0042498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 18","termid":"PBO:0042498"}


id: PBO:0111350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophismin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani1/Fkbp39","termid":"PBO:0111350"}


id: PBO:0090211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sed5","termid":"PBO:0090211"}


id: PBO:0083233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion enhances replication of Brome mosaic virus in S. cerevisiae, but likely due to effects on the overlapping gene","termid":"PBO:0083233"}


id: PBO:0049894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 4","termid":"PBO:0049894"}


id: PBO:0074568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 22","termid":"PBO:0074568"}


id: PBO:0061631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 14","termid":"PBO:0061631"}


id: GO:1901877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion binding.","definition_xrefs":["PMID:16432188","GOC:TermGenie","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"},{"relation_name":"is_a","term_name":"regulation of calcium ion binding","termid":"GO:1901876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion binding","synonyms":[{"name":"down regulation of calcium ion binding","type":"exact"},{"name":"down regulation of calcium ion storage activity","type":"related"},{"name":"down-regulation of calcium ion binding","type":"exact"},{"name":"down-regulation of calcium ion storage activity","type":"related"},{"name":"downregulation of calcium ion binding","type":"exact"},{"name":"downregulation of calcium ion storage activity","type":"related"},{"name":"inhibition of calcium ion binding","type":"narrow"},{"name":"inhibition of calcium ion storage activity","type":"related"},{"name":"negative regulation of calcium ion storage activity","type":"related"}],"termid":"GO:1901877"}


id: PBO:0083624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase; forms heterodimer with Rad6p to regulate K63 polyubiquitination in response to oxidative stress and to monoubiquinate histone H2B-K123, which is required for the subsequent methylation of histone H3-K4 and H3-K79; required for DSBR, transcription, silencing, and checkpoint control; interacts with RNA-binding protein Npl3p, linking histone ubiquitination to mRNA processing; Bre1p-dependent histone ubiquitination promotes pre-mRNA splicing","termid":"PBO:0083624"}


id: GO:0099165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane of a symmetric synapse. Its major components include that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components. This structure is not as thick or electron dense as the postsynaptic density found in asymmetric synapses.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization of symmetric synapse, intracellular component","termid":"GO:0099165"}


id: GO:0016026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome endopeptidase core (obsolete GO:0016026)","synonyms":[{"name":"proteasome endopeptidase core","type":"exact"}],"termid":"GO:0016026"}


id: PBO:0056872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICB divergent transcript","termid":"PBO:0056872"}


id: PBO:0029944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_mixed_population_including_curved_cells_(obsolete_FYPO:0002293)","termid":"PBO:0029944"}


id: GO:0007494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the midgut over time, from its formation to the mature structure. The midgut is the middle part of the alimentary canal from the stomach, or entrance of the bile duct, to, or including, the large intestine.","definition_xrefs":["UBERON:0001045","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midgut development","termid":"GO:0007494"}


id: PBO:0052272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4F","termid":"PBO:0052272"}


id: FYPO:0004398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phenylarsine oxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to phenylarsine oxide","synonyms":[{"name":"resistance to phenylarsine oxide during mitotic cell cycle","type":"related"},{"name":"resistance to phenylarsine oxide during vegetative growth","type":"exact"},{"name":"resistant to phenylarsine oxide","type":"exact"}],"termid":"FYPO:0004398"}


id: GO:0046721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of formic acid, HCOOH, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate transport","termid":"GO:0015724"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"formic acid secretion","synonyms":[{"name":"formate secretion","type":"exact"}],"termid":"GO:0046721"}


id: SO:1000173
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A duplication consisting of 2 identical adjacent regions.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duplication","termid":"SO:1000035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem_duplication","synonyms":[{"name":"erverted","type":"related"},{"name":"tandem duplication","type":"exact"}],"termid":"SO:1000173"}


id: FYPO:0000007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitotic cell cycle checkpoint phenotype in which the S phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is abnormal. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal S-phase DNA damage checkpoint","secondary_identifiers":["FYPO:0000195"],"synonyms":[{"name":"DNA damage checkpoint defects, S-phase","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint activation","type":"related"},{"name":"abnormal S-phase DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abnormal intra-S DNA damage checkpoint","type":"exact"},{"name":"abnormal mitotic S-phase DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0000007"}


id: PBO:0060446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADK2 antisense RNA 1","termid":"PBO:0060446"}


id: PBO:0077092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 7","termid":"PBO:0077092"}


id: PBO:0030468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pantothenate_import","termid":"PBO:0030468"}


id: GO:0033866
data:
  {"annotated_genes":["SJAG_00866","SJAG_04288","SJAG_03064","SJAG_00427","SJAG_02006","SJAG_02158","SJAG_03731","SJAG_05277","SJAG_03290","SJAG_04627","SJAG_03313","SJAG_01402","SJAG_04007","SJAG_02741","SJAG_01139","SJAG_00982"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89372,94509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[104702,114533,95152,91134,83601,110346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[106714,110944,88347,85532,113147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[103580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[94488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleoside bisphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00427":null,"SJAG_00866":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02741":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03313":null,"SJAG_03731":null,"SJAG_04007":null,"SJAG_04288":null,"SJAG_04627":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleoside bisphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside bisphosphate anabolism","type":"exact"},{"name":"nucleoside bisphosphate biosynthesis","type":"exact"},{"name":"nucleoside bisphosphate formation","type":"exact"},{"name":"nucleoside bisphosphatehate synthesis","type":"exact"}],"termid":"GO:0033866","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0015937":null,"GO:0019427":null,"GO:0035338":null,"GO:1990181":null,"GO:2001295":null}}


id: PBO:0077867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 8","termid":"PBO:0077867"}


id: GO:0030755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 3,5,7,3',4'-pentahydroxyflavone = S-adenosyl-L-homocysteine + 3-methoxy-5,7,3',4'-tetrahydroxy-flavone.","definition_xrefs":["EC:2.1.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"quercetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:QUERCETIN-3-O-METHYLTRANSFERASE-RXN","RHEA:17673"],"synonyms":[{"name":"S-adenosyl-L-methionine:3,5,7,3',4'-pentahydroxyflavone 3-O-methyltransferase activity","type":"related"},{"name":"flavonoid 3-methyltransferase activity","type":"related"},{"name":"flavonol 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0030755"}


id: PR:O60170
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cationic amino acid transporter 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino-acid permease meu22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.06c","secondary_identifiers":["UniProtKB:O60170"],"synonyms":[{"name":"SPBC19F8.06c","type":"related"},{"name":"Spom972h-SLC7A3","type":"exact"},{"name":"meiotic expression up-regulated protein 22 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60170"}


id: PBO:0082769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sorting and Assembly Machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; the complex binds precursors of beta-barrel proteins and facilitates their outer membrane insertion; homologous to bacterial Omp85","termid":"PBO:0082769"}


id: GO:0071747
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgA immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["PMID:16362985","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgA immunoglobulin complex","termid":"GO:0071745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"IgA B cell receptor complex","synonyms":[{"name":"membrane-bound IgA","type":"narrow"},{"name":"membrane-bound IgA1","type":"narrow"},{"name":"membrane-bound IgA2","type":"narrow"},{"name":"surface IgA","type":"narrow"},{"name":"surface IgA1","type":"narrow"},{"name":"surface IgA2","type":"narrow"}],"termid":"GO:0071747"}


id: PBO:0109001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 96","termid":"PBO:0109001"}


id: GO:1904002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sebum secreting cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:16901790","GOC:hjd","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"sebum secreting cell proliferation","termid":"GO:1990654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sebum secreting cell proliferation","synonyms":[{"name":"regulation of sebocyte proliferation","type":"related"}],"termid":"GO:1904002"}


id: PBO:0049942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase","termid":"PBO:0049942"}


id: PBO:0060957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor delta","termid":"PBO:0060957"}


id: GO:0070280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxal, 3-hydroxy-5-(hydroxymethyl)-2-methylpyridine-4-carbaldehyde, a form of vitamin B6.","definition_xrefs":["CHEBI:17310","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyridoxal binding","termid":"GO:0070280"}


id: PBO:0083578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; putative HLH protein; partially overlaps the verified ORF MAL11/YGR289C (a high-affinity maltose transporter)","termid":"PBO:0083578"}


id: FYPO:0004430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins earlier than normal, e.g. before the mitotic spindle has completely disassembled. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["PomBase:mah","GO:1902404","PMID:19029336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0004803","FYPO:0000631"],"is_obsolete":false,"name":"premature actomyosin contractile ring contraction","synonyms":[{"name":"advanced actomyosin contractile ring contraction","type":"exact"},{"name":"decreased dwell time before actomyosin contractile ring contraction","type":"exact"},{"name":"premature actomyosin contractile ring constriction","type":"exact"},{"name":"premature actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"premature actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"premature contractile ring contraction","type":"exact"},{"name":"premature cytokinetic contractile ring contraction","type":"exact"},{"name":"premature mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"premature mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0004430"}


id: PBO:0045118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMRT like family A2","termid":"PBO:0045118"}


id: PR:O74415
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- urb1 gene.","definition_xrefs":["UniProtKB:O74415","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14G10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC14G10.02","synonyms":[{"name":"Spom972h-urb1","type":"exact"}],"termid":"PR:O74415"}


id: GO:0019469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of octopine (N-(1-carboxy-4-guanidinobutyl)-L-alanine), an amino acid derived opine.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"octopine metabolic process","termid":"GO:0046419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"octopine catabolic process","secondary_identifiers":["MetaCyc:OCTOPINEDEG-PWY"],"synonyms":[{"name":"octopine breakdown","type":"exact"},{"name":"octopine catabolism","type":"exact"},{"name":"octopine degradation","type":"exact"}],"termid":"GO:0019469"}


id: GO:0060531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquires specialized structural and functions of a neuroendocrine cell of the prostate gland acinus.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroendocrine cell differentiation involved in prostate gland acinus development","termid":"GO:0060531"}


id: SO:0000219
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding histidyl tRNA (SO:0000262).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine_tRNA_primary_transcript","synonyms":[{"name":"histidine tRNA primary transcript","type":"exact"}],"termid":"SO:0000219"}


id: PBO:0053613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 649","termid":"PBO:0053613"}


id: PBO:0047818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXN3 pseudogene 2","termid":"PBO:0047818"}


id: PBO:0078394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 4-1","termid":"PBO:0078394"}


id: PBO:0001325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Elf1","termid":"PBO:0001325"}


id: PBO:0055543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2979","termid":"PBO:0055543"}


id: GO:0005981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of glycogen metabolic process","termid":"GO:0070873"},{"relation_name":"regulates","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of glycogen catabolic process","synonyms":[{"name":"regulation of glycogen breakdown","type":"exact"},{"name":"regulation of glycogen catabolism","type":"exact"},{"name":"regulation of glycogen degradation","type":"exact"},{"name":"regulation of glycogenolysis","type":"exact"}],"termid":"GO:0005981"}


id: GO:0032168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane within hyphae of filamentous fungi at sites where a septum will form; composed of septins as well as septin-associated proteins.","definition_xrefs":["GOC:krc","GOC:mah","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"hyphal septin ring","termid":"GO:0032168"}


id: PBO:0044492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP51A1 antisense RNA 1","termid":"PBO:0044492"}


id: PBO:0080700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNT5A antisense RNA 1","termid":"PBO:0080700"}


id: PBO:0091918
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FrataXiN","termid":"PBO:0091918"}


id: PBO:0055210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2635","termid":"PBO:0055210"}


id: PBO:0045071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 3","termid":"PBO:0045071"}


id: GO:0033542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on even-numbered carbons are degraded. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["GOC:mah","MetaCyc:PWY-5138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, even number","termid":"GO:0033542"}


id: GO:1901679
data:
  {"annotated_genes":["SJAG_03334","SJAG_04328","SJAG_00612","SJAG_03503","SJAG_04325","SJAG_00760","SJAG_00154","SJAG_02050","SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61275,107006],"is_not":false,"summary":null,"term":"GO:1901679"},{"annotations":[102806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[61276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035350"},{"annotations":[111252,63297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[97471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[107004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[107005,98974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[86975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[103672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[89021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[95419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"}]},"cv_name":"biological_process","definition":"The directed movement of nucleotide across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nucleotide transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleotide membrane transport","type":"exact"}],"termid":"GO:1901679","terms_by_termid":{"GO:0035348":null,"GO:0035350":null,"GO:0140021":null,"GO:1901679":null,"GO:1903790":null,"GO:1990519":null,"GO:1990544":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: PBO:0034339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_branching_part","termid":"PBO:0034339"}


id: GO:0009296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The assembly of a flagellum. In bacteria, this is a whiplike motility appendage present on the surface of some species; in eukaryotes, flagella are threadlike protoplasmic extensions used to propel flagellates and sperm. Flagella are composed of flagellin and have the same basic structure as cilia but are longer in proportion to the cell and present in much smaller numbers.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellum assembly (obsolete GO:0009296)","synonyms":[{"name":"flagellum biogenesis","type":"related"},{"name":"flagella assembly","type":"exact"},{"name":"flagella biogenesis","type":"related"},{"name":"flagellum assembly","type":"exact"}],"termid":"GO:0009296"}


id: PBO:0059990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 10","termid":"PBO:0059990"}


id: GO:0008890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + glycine = L-2-amino-3-oxobutanoate + CoA.","definition_xrefs":["RHEA:20736","EC:2.3.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acetyltransferase activity","termid":"GO:0016453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"glycine C-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00371","MetaCyc:AKBLIG-RXN"],"synonyms":[{"name":"glycine acetyltransferase activity","type":"related"}],"termid":"GO:0008890"}


id: GO:2001238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic signaling pathway","termid":"GO:2001235"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"positively_regulates","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of extrinsic apoptotic signaling pathway","synonyms":[{"name":"positive regulation of extrinsic apoptosis","type":"narrow"},{"name":"positive regulation of extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001238"}


id: GO:0061902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of 1-phosphatidylinositol-3-kinase activity.","definition_xrefs":["PMID:18723082","GOC:aruk","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of 1-phosphatidylinositol-3-kinase activity (obsolete GO:0061902)","termid":"GO:0061902"}


id: PBO:0079399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 6","termid":"PBO:0079399"}


id: FYPO:0000044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription by glucose (glucose repression) is abnormal. For example, specific genes that are normally not transcribed in the presence of glucose may be transcribed in the mutant.","definition_xrefs":["PomBase:mah","GO:0045014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"},{"relation_name":"is_a","term_name":"abnormal cellular response to nutrient","termid":"FYPO:0001484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abnormal negative regulation of transcription by glucose","secondary_identifiers":["FYPO:0000210"],"synonyms":[{"name":"abnormal glucose repression","type":"exact"},{"name":"abnormal glucose repression during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of transcription by glucose during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of transcription by glucose during vegetative growth","type":"exact"},{"name":"glucose repression defects","type":"exact"},{"name":"glucose-insensitive transcription","type":"related"}],"termid":"FYPO:0000044"}


id: PBO:0043179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliated left-right organizer metallopeptidase","termid":"PBO:0043179"}


id: PBO:0046639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 20","termid":"PBO:0046639"}


id: PBO:0041430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 82","termid":"PBO:0041430"}


id: SO:0001485
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A Y' element is a repeat region (SO:0000657) located adjacent to telomeric repeats or X element combinatorial repeats, either as a single copy or tandem repeat of two to four copies.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"telomere","termid":"SO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_prime_element","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:Y_prime_element","type":"exact"},{"name":"Y prime element","type":"exact"},{"name":"Y' element","type":"exact"}],"termid":"SO:0001485"}


id: PBO:0082823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved nuclear RNA-binding protein; specifically binds to transcribed chromatin in a THO- and RNA-dependent manner, genetically interacts with shuttling hnRNP NAB2; overproduction suppresses transcriptional defect caused by hpr1 mutation","termid":"PBO:0082823"}


id: GO:0030228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a lipoprotein particle and delivering the lipoprotein particle into the cell via endocytosis. A lipoprotein particle, also known as a lipoprotein, is a clathrate complex consisting of a lipid enwrapped in a protein host without covalent binding in such a way that the complex has a hydrophilic outer surface consisting of all the protein and the polar ends of any phospholipids.","definition_xrefs":["GOC:mah","GOC:bf","PMID:12827279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"lipoprotein particle receptor activity","synonyms":[{"name":"lipoprotein receptor activity","type":"exact"},{"name":"plasma lipoprotein particle receptor activity","type":"narrow"}],"termid":"GO:0030228"}


id: FYPO:0007979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain interphase microtubule bundles with more microtubules than normal.","definition_xrefs":["PomBase:mlr","PMID:15837798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002399"],"is_obsolete":false,"name":"increased number of microtubules per bundle during mitotic interphase","termid":"FYPO:0007979"}


id: PBO:0079653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 1","termid":"PBO:0079653"}


id: FYPO:0005038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["GO:0071619","PomBase:mah","PMID:22144909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during nitrogen starvation","termid":"FYPO:0005036"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abolished phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen starvation","synonyms":[{"name":"abolished phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen depletion","type":"exact"},{"name":"abolished phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen deprivation","type":"exact"},{"name":"phosphorylation of RNA polymerase II CTD serine 2 residues abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005038"}


id: SO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in partially rearranged genomic DNA including D-J-region with 5' UTR and 3' UTR, also designated as D-J-segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DJ_gene_segment","synonyms":[{"name":"D-J-GENE","type":"exact"},{"name":"DJ gene","type":"exact"}],"termid":"SO:0000572"}


id: PBO:0072465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 29","termid":"PBO:0072465"}


id: PBO:0077894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taperin","termid":"PBO:0077894"}


id: PBO:0036052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036052"}


id: GO:1904960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytochrome-c oxidase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:26734017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"positive regulation of electron transfer activity","termid":"GO:1904734"},{"relation_name":"is_a","term_name":"regulation of cytochrome-c oxidase activity","termid":"GO:1904959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of cytochrome-c oxidase activity","synonyms":[{"name":"activation of NADH cytochrome c oxidase","type":"narrow"},{"name":"activation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"activation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"activation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"activation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"activation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"activation of cytochrome a3 activity","type":"narrow"},{"name":"activation of cytochrome aa3 activity","type":"narrow"},{"name":"activation of cytochrome c oxidase activity","type":"narrow"},{"name":"activation of cytochrome oxidase activity","type":"related"},{"name":"activation of cytochrome-c oxidase activity","type":"narrow"},{"name":"activation of ferrocytochrome c oxidase","type":"narrow"},{"name":"activation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"activation of indophenol oxidase","type":"narrow"},{"name":"activation of indophenolase","type":"narrow"},{"name":"activation of warburg's respiratory enzyme activity","type":"related"},{"name":"positive regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"positive regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"positive regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"positive regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"positive regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"positive regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"positive regulation of cytochrome a3 activity","type":"narrow"},{"name":"positive regulation of cytochrome aa3 activity","type":"narrow"},{"name":"positive regulation of cytochrome c oxidase activity","type":"exact"},{"name":"positive regulation of cytochrome oxidase activity","type":"related"},{"name":"positive regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"positive regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"positive regulation of indophenol oxidase","type":"narrow"},{"name":"positive regulation of indophenolase","type":"narrow"},{"name":"positive regulation of warburg's respiratory enzyme activity","type":"related"},{"name":"up regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"up regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"up regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"up regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"up regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"up regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"up regulation of cytochrome a3 activity","type":"narrow"},{"name":"up regulation of cytochrome aa3 activity","type":"narrow"},{"name":"up regulation of cytochrome c oxidase activity","type":"exact"},{"name":"up regulation of cytochrome oxidase activity","type":"related"},{"name":"up regulation of cytochrome-c oxidase activity","type":"exact"},{"name":"up regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"up regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"up regulation of indophenol oxidase","type":"narrow"},{"name":"up regulation of indophenolase","type":"narrow"},{"name":"up regulation of warburg's respiratory enzyme activity","type":"related"},{"name":"up-regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"up-regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"up-regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"up-regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"up-regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"up-regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"up-regulation of cytochrome a3 activity","type":"narrow"},{"name":"up-regulation of cytochrome aa3 activity","type":"narrow"},{"name":"up-regulation of cytochrome c oxidase activity","type":"exact"},{"name":"up-regulation of cytochrome oxidase activity","type":"related"},{"name":"up-regulation of cytochrome-c oxidase activity","type":"exact"},{"name":"up-regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"up-regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"up-regulation of indophenol oxidase","type":"narrow"},{"name":"up-regulation of indophenolase","type":"narrow"},{"name":"up-regulation of warburg's respiratory enzyme activity","type":"related"},{"name":"upregulation of NADH cytochrome c oxidase","type":"exact"},{"name":"upregulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"upregulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"upregulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"upregulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"upregulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"upregulation of cytochrome a3 activity","type":"narrow"},{"name":"upregulation of cytochrome aa3 activity","type":"narrow"},{"name":"upregulation of cytochrome c oxidase activity","type":"exact"},{"name":"upregulation of cytochrome oxidase activity","type":"related"},{"name":"upregulation of cytochrome-c oxidase activity","type":"exact"},{"name":"upregulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"upregulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"upregulation of indophenol oxidase","type":"narrow"},{"name":"upregulation of indophenolase","type":"narrow"},{"name":"upregulation of warburg's respiratory enzyme activity","type":"related"}],"termid":"GO:1904960"}


id: PBO:0078164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 41","termid":"PBO:0078164"}


id: PBO:0066865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 165","termid":"PBO:0066865"}


id: PR:O74991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/TPR repeat protein pof3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.16","synonyms":[{"name":"Spom972h-pof3","type":"exact"}],"termid":"PR:O74991"}


id: PBO:0072529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 59","termid":"PBO:0072529"}


id: PBO:0052779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 19 pseudogene 2","termid":"PBO:0052779"}


id: PBO:0109105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial UbiB/ABC kinase -like family membrane protein implicted in mitochondrial ergosterol and phospholipid homeostasis Cqd2","termid":"PBO:0109105"}


id: PBO:0039469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 17","termid":"PBO:0039469"}


id: PBO:0045186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B5 pseudogene 1","termid":"PBO:0045186"}


id: GO:0060428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the lung epithelium from an initial condition to its mature state. This process begins with the formation of lung epithelium and ends with the mature structure. The lung epithelium is the specialized epithelium that lines the inside of the lung.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung epithelium development","synonyms":[{"name":"pulmonary epithelium development","type":"exact"}],"termid":"GO:0060428"}


id: PBO:0073419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seizure related 6 homolog","termid":"PBO:0073419"}


id: PBO:0054386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1782","termid":"PBO:0054386"}


id: GO:0060366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the lambdoid suture is generated and organized.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial suture morphogenesis","termid":"GO:0060363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lambdoid suture morphogenesis","termid":"GO:0060366"}


id: PBO:0031772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_fermentation","termid":"PBO:0031772"}


id: GO:0006644
data:
  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id: PBO:0084989
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent aldehyde reductase; utilizes aromatic and alophatic aldehyde substrates; member of the short-chain dehydrogenase/reductase superfamily","termid":"PBO:0084989"}


id: GO:0006918
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of apoptosis by p53 (obsolete GO:0006918)","synonyms":[{"name":"induction of apoptosis by p53","type":"exact"}],"termid":"GO:0006918"}


id: PBO:0086480
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency; localizes to vacuole in response to H2O2","termid":"PBO:0086480"}


id: PBO:0081554
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF473 cis regulating lncRNA","termid":"PBO:0081554"}


id: PBO:0063107
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presenilin associated rhomboid like","termid":"PBO:0063107"}


id: SO:0001506
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of sequences (often chromosomes) of an individual.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genome","termid":"SO:0001026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_genome","synonyms":[{"name":"variant genome","type":"related"}],"termid":"SO:0001506"}


id: PBO:0034664
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cohesin_loading","termid":"PBO:0034664"}


id: GO:0019082
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a viral protein.","definition_xrefs":["ISBN:0781702534","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral gene expression","termid":"GO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral protein processing","termid":"GO:0019082"}


id: PBO:0079786
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A7","termid":"PBO:0079786"}


id: PBO:0074766
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 2","termid":"PBO:0074766"}


id: PBO:0027542
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_intracellular_mitochondrion_distribution","termid":"PBO:0027542"}


id: FYPO:0005668
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cyclic AMP (cAMP). Cells stop growing (and may die) at a concentration of cAMP that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to phosphate (Pi)","termid":"FYPO:0008229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to cAMP","synonyms":[{"name":"hypersensitive to cAMP","type":"exact"},{"name":"sensitive to cAMP during mitotic cell cycle","type":"related"},{"name":"sensitive to cAMP during vegetative growth","type":"exact"},{"name":"sensitive to cyclic AMP","type":"exact"}],"termid":"FYPO:0005668"}


id: PR:000027526
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication regulator sld2 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:11937031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication regulator sld2","termid":"PR:000027523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drc1/UnMod","pombase_gene_id":"SPAC6B12.11","synonyms":[{"name":"DNA replication regulator drc1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PomBase_original_PRO_term_name: DNA replication regulator sld2 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-SLD2/UnMod","type":"exact"},{"name":"drc1/UnMod","type":"exact"}],"termid":"PR:000027526"}


id: FYPO:0006458
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects histone modification.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone modification","termid":"FYPO:0006458"}


id: PBO:0051943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine triphosphatase","termid":"PBO:0051943"}


id: PBO:0005167
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-Associated Factor","termid":"PBO:0005167"}


id: PBO:0079485
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXN2 pseudogene 1","termid":"PBO:0079485"}


id: PBO:0067278
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 357, pseudogene","termid":"PBO:0067278"}


id: PBO:0078589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 2, Y-linked","termid":"PBO:0078589"}


id: GO:0043066
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"negatively_regulates","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process","secondary_identifiers":["GO:0006916"],"synonyms":[{"name":"anti-apoptosis","type":"exact"},{"name":"apoptosis inhibitor activity","type":"related"},{"name":"down regulation of apoptosis","type":"exact"},{"name":"down-regulation of apoptosis","type":"exact"},{"name":"downregulation of apoptosis","type":"exact"},{"name":"inhibition of apoptosis","type":"narrow"},{"name":"negative regulation of apoptosis","type":"narrow"},{"name":"pro-survival","type":"related"}],"termid":"GO:0043066"}


id: PBO:0079489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 9","termid":"PBO:0079489"}


id: PBO:0044244
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut like homeobox 1","termid":"PBO:0044244"}


id: PBO:0003713
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  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INheritance of Peroxisomes","termid":"PBO:0003713"}


id: PBO:0002901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyphosphate synthetase (predicted)","termid":"PBO:0002901"}


id: GO:0098995
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell wall lipopolysaccharides to allow entry into the host cell. For example a phage entering a Gram-negative bacterium may actively break down outer membrane lipopolysaccharides.","definition_xrefs":["VZ:3940","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell wall","termid":"GO:0052009"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell envelope lipopolysaccharide","secondary_identifiers":["VZ:3939"],"synonyms":[{"name":"degradation of host cell envelope lipopolysaccharide during viral entry","type":"exact"},{"name":"degradation of host lipopolysaccharide during virus entry","type":"exact"},{"name":"disassembly by virus of outer membrane lipopolysaccharide during viral entry","type":"narrow"},{"name":"disruption by virus of host envelope lipopolysaccharide during virus entry","type":"exact"}],"termid":"GO:0098995"}


id: GO:1900126
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hyaluronan biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of hyaluronan biosynthetic process","termid":"GO:1900125"},{"relation_name":"negatively_regulates","term_name":"hyaluronan biosynthetic process","termid":"GO:0030213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hyaluronan biosynthetic process","synonyms":[{"name":"down regulation of hyaluronan anabolism","type":"exact"},{"name":"down regulation of hyaluronan biosynthesis","type":"exact"},{"name":"down regulation of hyaluronan biosynthetic process","type":"exact"},{"name":"down regulation of hyaluronan formation","type":"exact"},{"name":"down regulation of hyaluronan synthesis","type":"exact"},{"name":"down-regulation of hyaluronan anabolism","type":"exact"},{"name":"down-regulation of hyaluronan biosynthesis","type":"exact"},{"name":"down-regulation of hyaluronan biosynthetic process","type":"exact"},{"name":"down-regulation of hyaluronan formation","type":"exact"},{"name":"down-regulation of hyaluronan synthesis","type":"exact"},{"name":"downregulation of hyaluronan anabolism","type":"exact"},{"name":"downregulation of hyaluronan biosynthesis","type":"exact"},{"name":"downregulation of hyaluronan biosynthetic process","type":"exact"},{"name":"downregulation of hyaluronan formation","type":"exact"},{"name":"downregulation of hyaluronan synthesis","type":"exact"},{"name":"inhibition of hyaluronan anabolism","type":"exact"},{"name":"inhibition of hyaluronan biosynthesis","type":"exact"},{"name":"inhibition of hyaluronan biosynthetic process","type":"narrow"},{"name":"inhibition of hyaluronan formation","type":"exact"},{"name":"inhibition of hyaluronan synthesis","type":"exact"},{"name":"negative regulation of hyaluronan anabolism","type":"exact"},{"name":"negative regulation of hyaluronan biosynthesis","type":"exact"},{"name":"negative regulation of hyaluronan formation","type":"exact"},{"name":"negative regulation of hyaluronan synthesis","type":"exact"}],"termid":"GO:1900126"}


id: PBO:0080502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wound and keratinocyte migration associated lncRNA 1","termid":"PBO:0080502"}


id: PBO:0071081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 83","termid":"PBO:0071081"}


id: PBO:0088525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex zinc finger subunit Yth1","termid":"PBO:0088525"}


id: PBO:0082650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Shu complex (aka PCSS complex); Shu complex also includes Psy3, Csm2, Shu1, and promotes error-free DNA repair, Shu complex mediates inhibition of Srs2p function; promotes formation of Rad51p filaments; important for both mitotic and meiotic homologous recombination, and contains a conserved SWIM domain that is necessary for both","termid":"PBO:0082650"}


id: PR:O74926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rbd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC790.03","synonyms":[{"name":"Spom972h-rbd2","type":"exact"}],"termid":"PR:O74926"}


id: PBO:0053363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 272","termid":"PBO:0053363"}


id: GO:0070322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating deprivation of nitrogen.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of translation in response to nitrogen starvation (obsolete GO:0070322)","synonyms":[{"name":"down regulation of translation in response to nitrogen starvation","type":"exact"},{"name":"down-regulation of translation in response to nitrogen starvation","type":"exact"},{"name":"downregulation of translation in response to nitrogen starvation","type":"exact"},{"name":"inhibition of translation in response to nitrogen starvation","type":"narrow"}],"termid":"GO:0070322"}


id: PBO:0109261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NELL2 interacting cell ontogeny regulator 1","termid":"PBO:0109261"}


id: GO:0046154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhodopsin, a brilliant purplish-red, light-sensitive visual pigment found in the rod cells of the retinas.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhodopsin metabolic process","synonyms":[{"name":"rhodopsin metabolism","type":"exact"}],"termid":"GO:0046154"}


id: GO:1900498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of butyryl-CoA catabolic process to butanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide catabolic process","termid":"GO:0033122"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA catabolic process to butanol","termid":"GO:1900497"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"butyryl-CoA catabolic process to butanol","termid":"GO:0044582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0055086","GO:0008150","GO:0044248","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"negative regulation of butyryl-CoA catabolic process to butanol","synonyms":[{"name":"down regulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"down regulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"down-regulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"down-regulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"downregulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"downregulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"inhibition of butyryl-CoA catabolic process to butanol","type":"narrow"},{"name":"inhibition of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"negative regulation of butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:1900498"}


id: GO:0047388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [glutamine synthetase]-O(4)-(5'-adenylyl)-L-tyrosine + phosphate = [glutamine synthetase]-L-tyrosine + ADP.","definition_xrefs":["RHEA:43716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016779","GO:0140096"],"is_obsolete":false,"name":"[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase activity","secondary_identifiers":["EC:2.7.7.89","KEGG_REACTION:R03474","MetaCyc:GSDEADENYLATION-RXN"],"synonyms":[{"name":"[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase","type":"related"},{"name":"adenylyl(glutamine synthetase) hydrolase activity","type":"exact"},{"name":"adenylyl-L-glutamate:ammonia ligase (ADP-forming) adenylylhydrolase activity","type":"exact"},{"name":"adenylyl-[glutamate-ammonia ligase] hydrolase activity","type":"exact"},{"name":"adenylyl-glutamate-ammonia ligase hydrolase activity","type":"exact"},{"name":"adenylyl-glutamine-synthetasehydrolase activity","type":"exact"}],"termid":"GO:0047388"}


id: PBO:0053918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1215","termid":"PBO:0053918"}


id: PBO:0092014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b, Cob1","termid":"PBO:0092014"}


id: PBO:0076548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 2","termid":"PBO:0076548"}


id: PBO:0028869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_snoRNA_level","termid":"PBO:0028869"}


id: FYPO:0003568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of a spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the nucleus. An open fenestra remains present in the nuclear envelope.","definition_xrefs":["PMID:24963130","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","synonyms":[{"name":"SPB unanchored to nuclear envelope","type":"related"},{"name":"abnormal establishment of mitotic spindle pole body localization to nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during vegetative growth","type":"exact"},{"name":"spindle pole body in nucleoplasm, unanchored to nuclear envelope","type":"related"},{"name":"spindle pole body unanchored to nuclear envelope","type":"related"},{"name":"unanchored spindle pole bodies","type":"related"}],"termid":"FYPO:0003568"}


id: PBO:0078858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 6","termid":"PBO:0078858"}


id: PBO:0042269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6 pseudogene 4","termid":"PBO:0042269"}


id: GO:0016977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of beta-1,4-linkages between N-acetyl-D-glucosamine and D-glucosamine residues in a partly acetylated chitosan.","definition_xrefs":["EC:3.2.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"chitosanase activity","secondary_identifiers":["MetaCyc:3.2.1.132-RXN"],"synonyms":[{"name":"chitosan N-acetylglucosaminohydrolase activity","type":"related"}],"termid":"GO:0016977"}


id: FYPO:0000962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on hydrogen peroxide","synonyms":[{"name":"normal cell population growth in presence of hydrogen peroxide","type":"exact"},{"name":"normal cell population growth on H2O2","type":"exact"},{"name":"normal cell population growth on hydrogen peroxide","type":"exact"},{"name":"normal cellular response to hydrogen peroxide","type":"related"},{"name":"normal vegetative cell population growth on hydrogen peroxide","type":"exact"}],"termid":"FYPO:0000962"}


id: PBO:0049497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 4","termid":"PBO:0049497"}


id: GO:0048868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pollen tube over time, from its initial formation to a mature structure.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube development","termid":"GO:0048868"}


id: PBO:0077390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 130","termid":"PBO:0077390"}


id: GO:0043913
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A trimeric protein complex which in E. coli is composed of the subunits MreB, MreC and MreD. The complex directs longitudinal cell wall synthesis, maintaining cell morphology.","definition_xrefs":["PMID:15612918","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome segregation-directing complex (obsolete GO:0043913)","synonyms":[{"name":"MreBCD complex","type":"narrow"},{"name":"chromosome segregation directing complex","type":"exact"},{"name":"longitudinal peptidoglycan synthesis-directing complex","type":"exact"}],"termid":"GO:0043913"}


id: PBO:0075851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2B","termid":"PBO:0075851"}


id: PBO:0063560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelota mRNA surveillance and ribosome rescue factor","termid":"PBO:0063560"}


id: RO:HOM0000074
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Iterative homology that involves two structures, one of which originated as a duplicate of the other and co-opted the expression of patterning genes of the ancestral structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homocracy_relationship_with","termid":"RO:HOM0000003"},{"relation_name":"is_a","term_name":"in_iterative_homology_relationship_with","termid":"RO:HOM0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paramorphism_relationship_with","synonyms":[{"name":"axis paramorphism","type":"related"}],"termid":"RO:HOM0000074"}


id: GO:1902185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of shoot apical meristem development.","definition_xrefs":["PMID:21496644","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of shoot apical meristem development","termid":"GO:1902183"},{"relation_name":"positively_regulates","term_name":"shoot apical meristem development","termid":"GO:1902182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of shoot apical meristem development","synonyms":[{"name":"activation of SAM development","type":"exact"},{"name":"activation of primary shoot meristem development","type":"related"},{"name":"activation of promeristem development","type":"broad"},{"name":"activation of shoot apical meristem development","type":"narrow"},{"name":"positive regulation of SAM development","type":"exact"},{"name":"positive regulation of primary shoot meristem development","type":"related"},{"name":"positive regulation of promeristem development","type":"broad"},{"name":"up regulation of SAM development","type":"exact"},{"name":"up regulation of primary shoot meristem development","type":"related"},{"name":"up regulation of promeristem development","type":"broad"},{"name":"up regulation of shoot apical meristem development","type":"exact"},{"name":"up-regulation of SAM development","type":"exact"},{"name":"up-regulation of primary shoot meristem development","type":"related"},{"name":"up-regulation of promeristem development","type":"broad"},{"name":"up-regulation of shoot apical meristem development","type":"exact"},{"name":"upregulation of SAM development","type":"exact"},{"name":"upregulation of primary shoot meristem development","type":"related"},{"name":"upregulation of promeristem development","type":"broad"},{"name":"upregulation of shoot apical meristem development","type":"exact"}],"termid":"GO:1902185"}


id: PBO:0080994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 25","termid":"PBO:0080994"}


id: PBO:0036355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body assembly protein","termid":"PBO:0036355"}


id: GO:0016090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prenols, isoprenoids of general formula (H-CH2-C(CH3)=CH-CH2-)n-OH, any primary monohydroxy alcohol whose carbon skeleton consists of two or more isoprenoid residues linked head to tail.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"prenol metabolic process","synonyms":[{"name":"prenol metabolism","type":"exact"}],"termid":"GO:0016090"}


id: GO:1904478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intestinal absorption.","definition_xrefs":["PMID:12469120","GOC:BHF","GOC:rl","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal absorption","termid":"GO:1904478"}


id: PBO:0036160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_along_microtubule_during_vegetative_growth","termid":"PBO:0036160"}


id: PBO:0070441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase A pseudogene 1","termid":"PBO:0070441"}


id: PBO:0079318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 9A","termid":"PBO:0079318"}


id: GO:0006422
data:
  {"annotated_genes":["SJAG_04094","SJAG_01197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110157],"is_not":false,"summary":null,"term":"GO:0006422"},{"annotations":[114128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"}]},"cv_name":"biological_process","definition":"The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. The aspartyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of an aspartic acid accetping tRNA.","definition_xrefs":["ISBN:0716730510","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01197":null,"SJAG_04094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"aspartyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006422","terms_by_termid":{"GO:0006422":null,"GO:0070146":null}}


id: PBO:0079567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated and SH3 domain containing B","termid":"PBO:0079567"}


id: PBO:0068762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 7, pseudogene","termid":"PBO:0068762"}


id: PR:Q96WW5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A conserved oligomeric Golgi complex subunit 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21311:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.03","secondary_identifiers":["UniProtKB:Q96WW5"],"synonyms":[{"name":"COG complex subunit 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COG8","type":"exact"},{"name":"component of oligomeric Golgi complex 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi008","type":"related"}],"termid":"PR:Q96WW5"}


id: PR:O74536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.03c","synonyms":[{"name":"Spom972h-ssp2","type":"exact"}],"termid":"PR:O74536"}


id: GO:0047665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminolevulinate + pyruvate = 4,5-dioxopentanoate + L-alanine.","definition_xrefs":["RHEA:12480","EC:2.6.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"aminolevulinate transaminase activity","secondary_identifiers":["KEGG_REACTION:R02271","MetaCyc:AMINOLEVULINATE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"4,5-dioxovaleric acid aminotransferase activity","type":"related"},{"name":"4,5-dioxovaleric acid transaminase activity","type":"related"},{"name":"4,5-dioxovaleric transaminase activity","type":"related"},{"name":"5-aminolevulinate:pyruvate aminotransferase activity","type":"related"},{"name":"5-aminolevulinic acid transaminase activity","type":"related"},{"name":"DOVA transaminase activity","type":"related"},{"name":"L-alanine-4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"L-alanine:4,5-dioxovaleric acid transaminase activity","type":"related"},{"name":"L-alanine:dioxovalerate transaminase activity","type":"related"},{"name":"alanine-dioxovalerate aminotransferase activity","type":"related"},{"name":"alanine-gamma,delta-dioxovalerate aminotransferase activity","type":"related"},{"name":"alanine:4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"aminolevulinate aminotransferase activity","type":"exact"},{"name":"aminolevulinic acid transaminase activity","type":"related"},{"name":"dioxovalerate transaminase activity","type":"related"},{"name":"gamma,delta-dioxovalerate aminotransferase activity","type":"related"},{"name":"gamma,delta-dioxovaleric acid transaminase activity","type":"related"}],"termid":"GO:0047665"}


id: GO:0034050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes after interaction with a symbiont (defined as the smaller of two, or more, organisms engaged in symbiosis, a close interaction encompassing mutualism through parasitism). This can be triggered by direct interaction with the organism, for example, contact with penetrating hyphae of a fungus; or an indirect interaction such as symbiont-secreted molecules.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-induced defense-related programmed cell death","synonyms":[{"name":"host programmed cell death induced by symbiont","type":"exact"},{"name":"programmed cell death induced by symbiont","type":"exact"}],"termid":"GO:0034050"}


id: PBO:0013068
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CDC28","termid":"PBO:0013068"}


id: PBO:0040381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting accessory protein 1","termid":"PBO:0040381"}


id: PBO:0056256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MALL pseudogene 1","termid":"PBO:0056256"}


id: PBO:0068952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 196, pseudogene","termid":"PBO:0068952"}


id: GO:0043889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction:(2E,6E,10E)-geranylgeranyl diphosphate + sn-glycerol 1-phosphate = diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate.","definition_xrefs":["PMID:8408023","PMID:17253090","PMID:12801917","RHEA:23404"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-3-O-geranylgeranylglyceryl phosphate synthase activity (obsolete GO:0043889)","synonyms":[{"name":"(S)-3-O-geranylgeranylglycerylphosphate synthase activity","type":"exact"},{"name":"(S)-GGGP synthase activity","type":"exact"},{"name":"GGGP synthase activity","type":"exact"},{"name":"GGGPS","type":"exact"}],"termid":"GO:0043889"}


id: GO:1901616
data:
  {"annotated_genes":["SJAG_04870","SJAG_04192","SJAG_03786","SJAG_03804","SJAG_04048","SJAG_00237","SJAG_00244","SJAG_04320","SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[96982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006068"},{"annotations":[89179,112461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[84780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[84885,111148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[107877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[60929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[101145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of organic hydroxy compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_03786":null,"SJAG_03804":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organic hydroxy compound catabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"organic hydroxy compound breakdown","type":"exact"},{"name":"organic hydroxy compound catabolism","type":"exact"},{"name":"organic hydroxy compound degradation","type":"exact"}],"termid":"GO:1901616","terms_by_termid":{"GO:0006062":null,"GO:0006068":null,"GO:0016095":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null,"GO:0071545":null,"GO:1903457":null}}


id: PBO:0076333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 2","termid":"PBO:0076333"}


id: PBO:0051321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR22-1 (pseudogene)","termid":"PBO:0051321"}


id: PBO:0057220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378h","termid":"PBO:0057220"}


id: PBO:0001517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C (PKC)-like Pck1","termid":"PBO:0001517"}


id: GO:0047238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP.","definition_xrefs":["MetaCyc:2.4.1.175-RXN","EC:2.4.1.175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9632033","Reactome:R-HSA-1971482","Reactome:R-HSA-1971487","MetaCyc:RXN-16325","Reactome:R-HSA-3595176"],"synonyms":[{"name":"N-acetylgalactosaminyltransferase II activity","type":"exact"},{"name":"UDP-N-acetyl-D-galactosamine:D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:beta-D-glucuronosyl-(1->3)-N-acetyl-beta-D-galactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"chondroitin synthase activity","type":"related"},{"name":"glucuronyl-N-acetylgalactosaminylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"glucuronyl-N-acetylgalactosaminylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine-chondroitin acetylgalactosaminyltransferase II activity","type":"related"}],"termid":"GO:0047238"}


id: PBO:0059714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 22","termid":"PBO:0059714"}


id: PBO:0044398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 59, pseudogene","termid":"PBO:0044398"}


id: PBO:0063404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin like 3","termid":"PBO:0063404"}


id: PBO:0059001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated C","termid":"PBO:0059001"}


id: PBO:0068830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 68, pseudogene","termid":"PBO:0068830"}


id: GO:0009074
data:
  {"annotated_genes":["SJAG_03312","SJAG_02734","SJAG_04842","SJAG_00493","SJAG_03743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94477],"is_not":false,"summary":null,"term":"GO:0009074"},{"annotations":[84676,93398,93397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[102881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006572"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00493":null,"SJAG_02734":null,"SJAG_03312":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aromatic amino acid family breakdown","type":"exact"},{"name":"aromatic amino acid family catabolism","type":"exact"},{"name":"aromatic amino acid family degradation","type":"exact"}],"termid":"GO:0009074","terms_by_termid":{"GO:0000949":null,"GO:0006572":null,"GO:0009074":null}}


id: FYPO:0005609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B occurs over a smaller portion of the chromosome than normal in regions surrounding double-strand DNA breaks. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0005607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased spatial extent of histone H2B-K119 ubiquitination at double-strand break site during vegetative growth","synonyms":[{"name":"decreased spatial extent of histone H2B conserved C-terminal lysine ubiquitination at double-strand break site during vegetative growth","type":"exact"},{"name":"decreased spatial extent of histone H2B-K119 ubiquitination at DSB during vegetative growth","type":"exact"},{"name":"decreased spatial extent of histone H2B-K119 ubiquitination at double-strand break site during mitotic cell cycle during vegetative growth","type":"related"},{"name":"decreased spatial extent of histone H2B-K119 ubiquitination at site of double-strand break during vegetative growth","type":"exact"},{"name":"reduced spatial extent of histone H2B-K119 ubiquitination at double-strand break during vegetative growth","type":"exact"}],"termid":"FYPO:0005609"}


id: FYPO:0000565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular respiration is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular respiration","synonyms":[{"name":"increased cellular respiration during mitotic cell cycle","type":"related"},{"name":"increased cellular respiration during vegetative growth","type":"exact"},{"name":"increased respiration","type":"broad"},{"name":"increased respiratory metabolism","type":"exact"},{"name":"respiratory metabolism: increased","type":"related"}],"termid":"FYPO:0000565"}


id: PBO:0064801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1CB divergent transcript","termid":"PBO:0064801"}


id: GO:0034089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sister chromatids of a replicated chromosome become joined along the entire length of the chromosome during S phase during a meiotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of sister chromatid cohesion","termid":"GO:0034085"},{"relation_name":"part_of","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"establishment of meiotic sister chromatid cohesion","termid":"GO:0034089"}


id: GO:0046631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an alpha-beta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell activation","synonyms":[{"name":"alpha-beta T lymphocyte activation","type":"exact"},{"name":"alpha-beta T-cell activation","type":"exact"},{"name":"alpha-beta T-lymphocyte activation","type":"exact"}],"termid":"GO:0046631"}


id: GO:0034222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving chitin in a cell wall.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell wall chitin metabolic process (obsolete GO:0034222)","synonyms":[{"name":"regulation of cell wall chitin metabolism","type":"exact"}],"termid":"GO:0034222"}


id: GO:0071541
data:
  {"annotated_genes":["SJAG_04744","SJAG_04981","SJAG_04900","SJAG_02628","SJAG_04891","SJAG_03147","SJAG_03472","SJAG_02995","SJAG_02164"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86096,90916,92985,93865,93923,95050,101417,101712,106810],"is_not":false,"summary":null,"term":"GO:0071541"}]},"cv_name":"cellular_component","definition":"An eukaryotic translation initiation factor 3 complex that contains the PCI-domain protein eIF3m.","definition_xrefs":["PMID:15904532","PMID:19061185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic translation initiation factor 3 complex","termid":"GO:0005852"}],"gene_count":9,"genes_by_uniquename":{"SJAG_02164":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 complex, eIF3m","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eIF3m-containing eukaryotic translation initiation factor 3 complex","type":"exact"}],"termid":"GO:0071541","terms_by_termid":{"GO:0071541":null}}


id: GO:1905169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to phagocytic vesicle.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to phagocytic vesicle","termid":"GO:1905161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to phagocytic vesicle","synonyms":[{"name":"regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"regulation of protein localisation to phagosome","type":"exact"},{"name":"regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"regulation of protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905169"}


id: GO:1904174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone demethylase activity (H3-K4 specific).","definition_xrefs":["GOC:dph","GOC:TermGenie","GO_REF:0000059","PMID:24843136"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone demethylase activity (H3-K4 specific) (obsolete GO:1904174)","synonyms":[{"name":"down regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"down-regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"downregulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"inhibition of histone demethylase activity (H3-K4 specific)","type":"narrow"}],"termid":"GO:1904174"}


id: PBO:0067815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 117","termid":"PBO:0067815"}


id: PBO:0082150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyltransferase; enzyme mainly responsible for the introduction of saturated very long chain fatty acids into neo-synthesized molecules of phosphatidylinositol; required for incorporation of stearic acid into phosphatidylinositol; affects chromosome stability when overexpressed; CST26 has a paralog, YDR018C, that arose from the whole genome duplication","termid":"PBO:0082150"}


id: GO:0018515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + pimelyl-CoA = 2,3-didehydropimeloyl-CoA + H+ + NADH.","definition_xrefs":["EC:1.3.1.62","RHEA:19665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pimeloyl-CoA dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0194","KEGG_REACTION:R05311","MetaCyc:1.3.1.62-RXN"],"synonyms":[{"name":"pimeloyl-CoA:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018515"}


id: GO:0030730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sequestering of triglyceride","synonyms":[{"name":"retention of triacylglycerol","type":"exact"},{"name":"retention of triglyceride","type":"exact"},{"name":"sequestering of triacylglycerol","type":"exact"},{"name":"sequestration of triacylglycerol","type":"exact"},{"name":"sequestration of triglyceride","type":"exact"},{"name":"storage of triacylglycerol","type":"exact"},{"name":"storage of triglyceride","type":"exact"},{"name":"triacylglycerol retention","type":"exact"},{"name":"triacylglycerol sequestering","type":"exact"},{"name":"triacylglycerol sequestration","type":"exact"},{"name":"triacylglycerol storage","type":"exact"},{"name":"triglyceride retention","type":"exact"},{"name":"triglyceride sequestering","type":"exact"},{"name":"triglyceride sequestration","type":"exact"},{"name":"triglyceride storage","type":"exact"}],"termid":"GO:0030730"}


id: PBO:0076197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 6","termid":"PBO:0076197"}


id: GO:0009222
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide catabolic process","termid":"GO:0006244"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"ribonucleotide catabolic process","termid":"GO:0009261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleotide breakdown","type":"exact"},{"name":"pyrimidine ribonucleotide catabolism","type":"exact"},{"name":"pyrimidine ribonucleotide degradation","type":"exact"}],"termid":"GO:0009222","terms_by_termid":{"GO:0006256":null}}


id: PBO:0003872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl-AMP cyclohydrolase/phosphoribosyl- ATP pyrophosphohydrolase His7","termid":"PBO:0003872"}


id: PBO:0017813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, WW domain -binding Rbm42 (predicted)","termid":"PBO:0017813"}


id: PBO:0077475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 198","termid":"PBO:0077475"}


id: PBO:0057281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 502","termid":"PBO:0057281"}


id: GO:0031858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pituitary adenylate cyclase-activating polypeptide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"pituitary adenylate cyclase-activating polypeptide receptor binding","synonyms":[{"name":"PACAP receptor binding","type":"exact"},{"name":"pituitary adenylate cyclase activating peptide receptor binding","type":"exact"},{"name":"pituitary adenylate cyclase-activating peptide receptor ligand","type":"narrow"}],"termid":"GO:0031858"}


id: GO:0019443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of tryptophan, catalyzed by the enzyme tryptophanase (EC:4.1.99.1).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptophan catabolic process, using tryptophanase (obsolete GO:0019443)","synonyms":[{"name":"tryptophan breakdown, using tryptophanase","type":"exact"},{"name":"tryptophan catabolic process, using tryptophanase","type":"exact"},{"name":"tryptophan degradation, using tryptophanase","type":"exact"}],"termid":"GO:0019443"}


id: GO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a parasitic plant that act to protect an organism.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to parasitic plant","termid":"GO:0002241"},{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to parasitic plant","termid":"GO:0002242"}


id: GO:0150200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transport across the blood-brain barrier.","definition_xrefs":["GOC:aruk","PMID:30280653","GOC:bc","PMID:29377008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"part_of","term_name":"regulation of vascular permeability","termid":"GO:0043114"},{"relation_name":"regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"}


id: PBO:0047271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member C","termid":"PBO:0047271"}


id: GO:0090081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of canonical Wnt signaling pathway that regulates heart induction. Canonical Wnt signaling pathway involved in heart induction is the series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell, followed by relaying of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heart induction by regulation of canonical Wnt signaling pathway (obsolete GO:0090081)","synonyms":[{"name":"regulation of heart induction by regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of heart induction by regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of heart induction by regulation of canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0090081"}


id: SO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding lysyl tRNA (SO:0000265).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine_tRNA_primary_transcript","synonyms":[{"name":"lysine tRNA primary transcript","type":"exact"}],"termid":"SO:0000222"}


id: GO:0034308
data:
  {"annotated_genes":["SJAG_02421","SJAG_03370","SJAG_04067","SJAG_00827","SJAG_03743","SJAG_02420","SJAG_03822","SJAG_04866","SJAG_05006","SJAG_00240","SJAG_02406","SJAG_01414","SJAG_03362","SJAG_01970","SJAG_03786","SJAG_00381","SJAG_01742","SJAG_04282","SJAG_02047","SJAG_03538"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006068"},{"annotations":[84677,94848,110719,110718,94849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[92707],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[109795,85199],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[110118,109701,103486,112125,109707,90421,95641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[95643,58766,65420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[106559,106560,95644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving primary alcohols. A primary alcohol is any alcohol in which a hydroxy group, -OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_00381":null,"SJAG_00827":null,"SJAG_01414":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03370":null,"SJAG_03538":null,"SJAG_03743":null,"SJAG_03786":null,"SJAG_03822":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"primary alcohol metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"monohydric alcohol metabolic process","type":"exact"},{"name":"primary alcohol metabolism","type":"exact"}],"termid":"GO:0034308","terms_by_termid":{"GO:0006068":null,"GO:0006772":null,"GO:0009228":null,"GO:0019655":null,"GO:0036172":null,"GO:0090180":null,"GO:2001172":null}}


id: PR:O14066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tax4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased rDNA silencing protein 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.09","synonyms":[{"name":"Spom972h-tax4","type":"exact"}],"termid":"PR:O14066"}


id: PBO:0090262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L4","termid":"PBO:0090262"}


id: GO:0033564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone is directed to a specific target site along the anterior-posterior body axis in response to a combination of attractive and repulsive cues. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.","definition_xrefs":["GOC:kmv","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior axon guidance","synonyms":[{"name":"anterior-posterior axon guidance","type":"exact"},{"name":"anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:0033564"}


id: GO:1902594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A nuclear import which involves another organism.","definition_xrefs":["GO_REF:0000089","GOC:jl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism nuclear import (obsolete GO:1902594)","synonyms":[{"name":"multi organism nuclear import","type":"exact"}],"termid":"GO:1902594"}


id: PBO:0069870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1157, pseudogene","termid":"PBO:0069870"}


id: GO:0010463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation","termid":"GO:0010463"}


id: GO:0046364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monosaccharide biosynthetic process","synonyms":[{"name":"monosaccharide anabolism","type":"exact"},{"name":"monosaccharide biosynthesis","type":"exact"},{"name":"monosaccharide formation","type":"exact"},{"name":"monosaccharide synthesis","type":"exact"}],"termid":"GO:0046364"}


id: GO:0048574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change from the vegetative to the reproductive phase as a result of detection of, or exposure to, a period of light that exceeds the critical day length. The critical day length varies between species. Although the term is long-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness falls short of the number of hours defined by 24 minus the critical day length.","definition_xrefs":["ISBN:0709408862","GOC:pj","ISBN:0697037754","GOC:jid","ISBN:0582015952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-day photoperiodism","termid":"GO:0048571"},{"relation_name":"is_a","term_name":"photoperiodism, flowering","termid":"GO:0048573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long-day photoperiodism, flowering","synonyms":[{"name":"long-day photoperiodic control of flowering","type":"exact"},{"name":"long-day photoperiodic control of flowering time","type":"exact"},{"name":"long-day photoperiodic control of inflorescence development","type":"exact"},{"name":"response to long-day, flowering","type":"exact"},{"name":"response to short-night, flowering","type":"exact"},{"name":"short-night photoperiodism, flowering","type":"exact"}],"termid":"GO:0048574"}


id: PBO:0074662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 50B","termid":"PBO:0074662"}


id: GO:0004641
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106365],"is_not":false,"summary":null,"term":"GO:0004641"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(formamido)-N(1)-(5-phospho-D-ribosyl)acetamidine + ATP = 5-amino-1-(5-phospho-D-ribosyl)imidazole + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.3.1","RHEA:23032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"phosphoribosylformylglycinamidine cyclo-ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:AIRS-RXN","Reactome:R-HSA-73810","KEGG_REACTION:R04208"],"synonyms":[{"name":"2-(formamido)-1-N-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)","type":"related"},{"name":"2-(formamido)-N1-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)","type":"related"},{"name":"5'-aminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"AIR synthase activity","type":"related"},{"name":"AIR synthetase activity","type":"related"},{"name":"AIRS activity","type":"related"},{"name":"phosphoribosyl-aminoimidazole synthetase activity","type":"related"},{"name":"phosphoribosylaminoimidazole synthetase activity","type":"related"}],"termid":"GO:0004641","terms_by_termid":{"GO:0004641":null}}


id: FYPO:0007240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell polarity phenotype in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) differs between the two daughter cells formed as a result of cell division. Normally, growth begins at the old end and then becomes bipolar with similar timing in both daughter cells.","definition_xrefs":["PomBase:mah","PMID:31719163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO","termid":"FYPO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005568"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005568","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal NETO in daughter cells","synonyms":[{"name":"abnormal NETO in daughter cells during mitotic cell cycle","type":"related"},{"name":"abnormal NETO in daughter cells during vegetative growth","type":"exact"},{"name":"abnormal activation of bipolar cell growth in daughter cells","type":"related"},{"name":"abnormal cell growth mode switching, monopolar to bipolar, in daughter cells","type":"exact"},{"name":"abnormal new end take-off in daughter cells","type":"exact"},{"name":"abnormal switch from monopolar to bipolar cell growth in daughter cells","type":"exact"}],"termid":"FYPO:0007240"}


id: PBO:0051665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of CDK, cyclin A1 interacting protein 1","termid":"PBO:0051665"}


id: PBO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase Spk1","termid":"PBO:0001833"}


id: GO:0141180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A chromatin-protein adaptor activity that bridges dsDNA and chromatin proteins to bring regions of a chromosome in proximity. The DNA:DNA:RNA triple-helical structure is formed non-Watson-Crick base-pairing.","definition_xrefs":["PMID:35412350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-protein adaptor activity","termid":"GO:0140463"},{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0030674","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dsDNA-RNA triple helix-forming chromatin adaptor activity","termid":"GO:0141180"}


id: PBO:0079708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 2","termid":"PBO:0079708"}


id: GO:0015310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + benomyl(in) = H+(in) + benomyl(out).","definition_xrefs":["TC:2.A.1.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"benomyl:proton antiporter activity","synonyms":[{"name":"benomyl:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015310"}


id: PBO:0047498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog C","termid":"PBO:0047498"}


id: PBO:0029562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_1,3-beta-D-glucan_synthase_activity","termid":"PBO:0029562"}


id: PBO:0076343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 10","termid":"PBO:0076343"}


id: FYPO:0000862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"normal centromeric histone H3-K9 dimethylation","type":"exact"},{"name":"normal histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me2 at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000862"}


id: GO:0102162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8'-apo-beta,psi-caroten-8'-al + O2 = all-trans-retinal + 2,6-dimethylocta-2,4,6-trienedial.","definition_xrefs":["GOC:pz","EC:1.13.11.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"all-trans-8'-apo-beta-carotenal 15,15'-oxygenase activity","secondary_identifiers":["RHEA:26385","MetaCyc:RXN-11783"],"termid":"GO:0102162"}


id: PBO:0050431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 2","termid":"PBO:0050431"}


id: GO:0080190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of a plant axis (shoot axis or root) that originates from a lateral meristem.","definition_xrefs":["PO:0020145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral growth","termid":"GO:0080190"}


id: PBO:0028954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_proteasome","termid":"PBO:0028954"}


id: SO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone that is invalid.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated","termid":"SO:0000790"},{"relation_name":"is_a","term_name":"cDNA_clone","termid":"SO:0000317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_cDNA_clone","synonyms":[{"name":"invalidated cDNA clone","type":"exact"}],"termid":"SO:0000809"}


id: PBO:0072997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 1","termid":"PBO:0072997"}


id: PBO:0046643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 24","termid":"PBO:0046643"}


id: GO:0090213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of radial pattern formation, the regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"radial pattern formation","termid":"GO:0009956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of radial pattern formation","synonyms":[{"name":"regulation of radial pattern specification","type":"narrow"}],"termid":"GO:0090213"}


id: SO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Five_methoxycarbonylmethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:069"],"synonyms":[{"name":"5-methoxycarbonylmethyl-2'-O-methyluridine","type":"exact"},{"name":"five methoxycarbonylmethyl two prime O methyluridine","type":"exact"},{"name":"mcm5Um","type":"exact"}],"termid":"SO:0001361"}


id: FYPO:0006643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short mitotic spindle assembles and elongates during prophase, but does not elongate further and eventually collapses during metaphase.","definition_xrefs":["PMID:28178520","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle collapse","termid":"FYPO:0006475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"mitotic spindle collapse without elongation during metaphase","synonyms":[{"name":"broken mitotic spindle without elongation during metaphase","type":"related"},{"name":"mitotic spindle breakage without elongation during metaphase","type":"exact"},{"name":"mitotic spindle collapse without elongation during metaphase during vegetative growth","type":"exact"},{"name":"mitotic spindle collapse without extension during metaphase","type":"exact"},{"name":"spindle collapse without elongation during metaphase during mitotic cell cycle","type":"related"},{"name":"spindle collapse without elongation during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006643"}


id: PR:O13731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubr11 gene.","definition_xrefs":["UniProtKB:O13731","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase ubr11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.11","synonyms":[{"name":"N-end-recognizing protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"N-recognin-11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubr11","type":"exact"}],"termid":"PR:O13731"}


id: GO:0035962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-13 stimulus.","definition_xrefs":["PMID:20100461","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-13","synonyms":[{"name":"response to IL-13","type":"exact"}],"termid":"GO:0035962"}


id: PBO:0079837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC5B antisense RNA 1","termid":"PBO:0079837"}


id: PBO:0040899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 2","termid":"PBO:0040899"}


id: PBO:0011493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centaurin Cnt5","termid":"PBO:0011493"}


id: MOD:01001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a 2-aminoisobutyric acid.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoisobutyric acid residue (Aib)","synonyms":[{"name":"2-amino-2-methylpropanoic acid","type":"exact"},{"name":"2-amino-2-methylpropionic acid","type":"exact"},{"name":"2-methylalanine","type":"exact"},{"name":"Aib","type":"exact"},{"name":"alpha,alpha-dimethylglycine","type":"exact"},{"name":"alpha-aminoisobutyric acid","type":"exact"},{"name":"alpha-methylalanine","type":"exact"}],"termid":"MOD:01001"}


id: GO:0085004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the haustorium, a projection from a cell or tissue that penetrates the host's cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from haustorium (obsolete GO:0085004)","termid":"GO:0085004"}


id: FYPO:0005514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the vacuole is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to vacuole","synonyms":[{"name":"ectopic protein localization to vacuole","type":"exact"},{"name":"protein mislocalised to vacuole","type":"exact"},{"name":"protein mislocalised to vacuole during vegetative growth","type":"exact"},{"name":"protein mislocalized to vacuole during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0005514"}


id: GO:0045132
data:
  {"annotated_genes":["SJAG_00794","SJAG_02104","SJAG_04126","SJAG_05226","SJAG_03698","SJAG_01775","SJAG_03327","SJAG_00727","SJAG_04950","SJAG_01777","SJAG_00646","SJAG_03073","SJAG_07002","SJAG_01613","SJAG_01211","SJAG_03685","SJAG_01837","SJAG_05260","SJAG_03048","SJAG_03989","SJAG_01538","SJAG_02624","SJAG_02606","SJAG_00418","SJAG_01546","SJAG_01371","SJAG_05220","SJAG_02761","SJAG_02346","SJAG_05196","SJAG_03926","SJAG_05019","SJAG_05295","SJAG_03540","SJAG_03437","SJAG_05319","SJAG_04745","SJAG_00207","SJAG_03220","SJAG_05266","SJAG_03942","SJAG_01224","SJAG_01805","SJAG_04508","SJAG_02731","SJAG_01873","SJAG_01263","SJAG_04623","SJAG_03092","SJAG_03683","SJAG_01601","SJAG_03287","SJAG_03680","SJAG_01278","SJAG_03681","SJAG_04457","SJAG_03217","SJAG_04076","SJAG_02286","SJAG_02814","SJAG_00229","SJAG_02542","SJAG_00918","SJAG_04143","SJAG_00678","SJAG_00600","SJAG_00756","SJAG_01082","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112047],"is_not":false,"summary":null,"term":"GO:0045132"},{"annotations":[112774],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051316"},{"annotations":[84043,89957],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[111634,103930,83989,94747,109896,113155,97446,86438,89921],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[106663,83933,103931,107330,88996],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007129"},{"annotations":[90006,110601,87916,106294,109341,89922,85517,113791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045143"},{"annotations":[113156,85748],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"},{"annotations":[85920,102050],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[85921,96032,98938,101200,83576],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[95342,114220,89924,105254,112028,114735,91440,96502,98558],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990571"},{"annotations":[89925,97389,97913,110603,109342,109897,100606,112005,95248,103932],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[113659],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051307"},{"annotations":[90007,106295],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"},{"annotations":[109343,84177,107791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045144"},{"annotations":[90899,92900,95343],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090306"},{"annotations":[97546],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051232"},{"annotations":[95344,97547],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140642"},{"annotations":[83577,113642,113779,92849,112048,102051],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045141"},{"annotations":[102052,110099],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044821"},{"annotations":[90011,106297],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090006"},{"annotations":[98513],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"},{"annotations":[112789],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[113018,104996,106426,91695,103934,97450,87124,103613,94755,94040,89938,85302,85905,98560,96637,106005,105257,109345,110206,101579,91441,106467,112030],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear chromosome segregation","termid":"GO:0098813"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic nuclear 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chromosome segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045132","terms_by_termid":{"GO:0007129":null,"GO:0030999":null,"GO:0031619":null,"GO:0032121":null,"GO:0044821":null,"GO:0045132":null,"GO:0045141":null,"GO:0045143":null,"GO:0045144":null,"GO:0051232":null,"GO:0051307":null,"GO:0051316":null,"GO:0051455":null,"GO:0051456":null,"GO:0051755":null,"GO:0062123":null,"GO:0070197":null,"GO:0090006":null,"GO:0090306":null,"GO:0140642":null,"GO:1904967":null,"GO:1990571":null,"GO:1990813":null}}


id: GO:0048145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of multiplication or reproduction of fibroblast cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast proliferation","termid":"GO:0048145"}


id: PBO:0059298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L47","termid":"PBO:0059298"}


id: PBO:0070282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 23","termid":"PBO:0070282"}


id: PBO:0048941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi reassembly stacking protein 1","termid":"PBO:0048941"}


id: GO:0035599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the methylthiolation (-SCH3 addition) of the beta-carbon of peptidyl-aspartic acid to form peptidyl-L-beta-methylthioaspartic acid.","definition_xrefs":["PMID:18252828","RESID:AA0232","PMID:8844851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylthiotransferase activity","termid":"GO:0035596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aspartic acid methylthiotransferase activity","termid":"GO:0035599"}


id: GO:0046893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into an L-cysteinyl diiron subcluster, found in Fe-hydrogenase.","definition_xrefs":["RESID:AA0334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"iron incorporation into hydrogenase diiron subcluster via L-cysteine ligation","termid":"GO:0046893"}


id: GO:0071767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mycolic acids, beta-hydroxy fatty acids with a long alpha-alkyl side chain.","definition_xrefs":["GOC:mah","PMID:15653820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"mycolic acid metabolic process","synonyms":[{"name":"mycolate metabolic process","type":"exact"},{"name":"mycolic acid metabolism","type":"exact"}],"termid":"GO:0071767"}


id: PBO:0084306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron transporter, mediates Fe2+ transport across inner mito membrane; mitochondrial carrier family member; active under low-iron conditions; may transport other cations; MRS3 has a paralog, MRS4, that arose from the whole genome duplication","termid":"PBO:0084306"}


id: PBO:0065816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4A antisense RNA 1","termid":"PBO:0065816"}


id: PBO:0091914
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING Finger Protein","termid":"PBO:0091914"}


id: PBO:0083821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); complex couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; also localized to nuclear side of spindle pole body","termid":"PBO:0083821"}


id: GO:0006226
data:
  {"annotated_genes":["SJAG_03771","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95110,104487],"is_not":false,"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dUMP, deoxyuridine monophosphate (2'-deoxyuridine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009177"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dUMP metabolic process","termid":"GO:0046078"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dUMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dUMP anabolism","type":"exact"},{"name":"dUMP biosynthesis","type":"exact"},{"name":"dUMP formation","type":"exact"},{"name":"dUMP synthesis","type":"exact"}],"termid":"GO:0006226","terms_by_termid":{"GO:0006226":null}}


id: GO:0060601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of an epithelium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting from an epithelium","termid":"GO:0060601"}


id: GO:0062142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-beta-ethynylserine. L-beta-ethynylserine is an antibiotic produced by Streptomyces bacteria.","definition_xrefs":["PMID:30867596","PMID:3082841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal acetylenic compound biosynthetic process","termid":"GO:0120237"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-beta-ethynylserine biosynthetic process","termid":"GO:0062142"}


id: GO:0048794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the swim bladder over time, from its formation to the mature structure. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder development","synonyms":[{"name":"gas bladder development","type":"exact"}],"termid":"GO:0048794"}


id: PBO:0085841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YDL129W is not an essential gene; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085841"}


id: PBO:0090445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps54","termid":"PBO:0090445"}


id: GO:0120295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutaminyl-[histone] + serotonin = 5-serotonyl-L-glutamyl-[histone] + NH4(+).","definition_xrefs":["GOC:sp","PMID:30867594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide serotonyltransferase activity","termid":"GO:0120294"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone serotonyltransferase activity","termid":"GO:0120295"}


id: PBO:0087376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Starch hydrolysis","termid":"PBO:0087376"}


id: PBO:0080959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB2 pseudogene 1","termid":"PBO:0080959"}


id: GO:2000058
data:
  {"annotated_genes":["SJAG_00071","SJAG_03699","SJAG_00642","SJAG_02723","SJAG_00052","SJAG_01210","SJAG_02485","SJAG_00475","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[86553,103054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[85111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[105003,102763,113166,98504,107821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[110733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"regulates","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_01210":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein breakdown","type":"related"},{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein catabolic process","type":"related"},{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein catabolism","type":"related"},{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein degradation","type":"related"},{"name":"regulation of protein degradation tagging activity","type":"related"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein breakdown","type":"exact"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein catabolic process","type":"related"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein catabolism","type":"exact"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein degradation","type":"exact"},{"name":"regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolism","type":"exact"},{"name":"regulation of protein ubiquitylation during ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"regulation of protein ubiquitylation during ubiquitin-dependent protein catabolism","type":"exact"}],"termid":"GO:2000058","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:1905785":null,"GO:1905786":null}}


id: PBO:0004667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L34 (predicted)","termid":"PBO:0004667"}


id: GO:0075280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uredinium development, a process that leads to the formation of a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"uredinium development","termid":"GO:0075279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uredinium development","termid":"GO:0075280"}


id: GO:1901556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a candesartan stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to candesartan","termid":"GO:1901556"}


id: GO:0042705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a photoreceptor cell found in the ocellus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus photoreceptor cell differentiation","termid":"GO:0042705"}


id: GO:0052900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O2 + spermine = 1,3-diaminopropane + H2O2 + N-(3-aminopropyl)-4-aminobutanal.","definition_xrefs":["RHEA:25824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"spermine oxidase (propane-1,3-diamine-forming) activity","secondary_identifiers":["EC:1.5.3.14","MetaCyc:RXN-6421"],"synonyms":[{"name":"polyamine oxidase (propane-1,3-diamine-forming) activity","type":"broad"}],"termid":"GO:0052900"}


id: GO:0033728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorophyllide a + NADP+ = divinyl chlorophyllide a + NADPH + H+.","definition_xrefs":["EC:1.3.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"divinyl chlorophyllide a 8-vinyl-reductase activity","secondary_identifiers":["RHEA:14449","MetaCyc:RXN-5286"],"synonyms":[{"name":"4VCR","type":"related"},{"name":"[4-vinyl]chlorophyllide a reductase activity","type":"related"},{"name":"chlorophyllide-a:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0033728"}


id: PBO:0068361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 144A","termid":"PBO:0068361"}


id: GO:0003726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule.","definition_xrefs":["GOC:mah","RHEA:10120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine deaminase activity","termid":"GO:0004000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"double-stranded RNA adenosine deaminase activity","secondary_identifiers":["EC:3.5.4.37","Reactome:R-HSA-77615","GO:0003971","Reactome:R-HSA-77614"],"synonyms":[{"name":"double-stranded RNA specific editase activity","type":"related"}],"termid":"GO:0003726"}


id: PBO:0060343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IXA","termid":"PBO:0060343"}


id: GO:0004106
data:
  {"annotated_genes":["SJAG_00518"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85994],"is_not":false,"summary":null,"term":"GO:0004106"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate = prephenate.","definition_xrefs":["EC:5.4.99.5","RHEA:13897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00518":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"chorismate mutase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CHORISMATEMUT-RXN","KEGG_REACTION:R01715"],"synonyms":[{"name":"chorismate pyruvatemutase activity","type":"related"},{"name":"hydroxyphenylpyruvate synthase activity","type":"broad"}],"termid":"GO:0004106","terms_by_termid":{"GO:0004106":null}}


id: GO:0005147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oncostatin-M receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"oncostatin-M receptor binding","synonyms":[{"name":"oncostatin-M","type":"narrow"},{"name":"oncostatin-M receptor ligand","type":"narrow"}],"termid":"GO:0005147"}


id: PR:Q09687
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13C5.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoacetylglucosamine mutase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.05c","synonyms":[{"name":"N-acetylglucosamine-phosphate mutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC13C5.05c","type":"exact"},{"name":"acetylglucosamine phosphomutase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09687"}


id: PBO:0054166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1537","termid":"PBO:0054166"}


id: PBO:0059638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 4","termid":"PBO:0059638"}


id: GO:0002953
data:
  {"annotated_genes":["SJAG_01055"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113269],"is_not":false,"summary":null,"term":"GO:0002953"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-phosphate + H2O = a 2'-deoxyribonucleoside + phosphate.","definition_xrefs":["RHEA:36167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01055":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"5'-deoxynucleotidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.3.89"],"termid":"GO:0002953","terms_by_termid":{"GO:0002953":null}}


id: FYPO:0002222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindle is longer than normal during meiosis II.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long meiotic spindle","termid":"FYPO:0000736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000120","FYPO:0002399","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"long meiosis II spindle","synonyms":[{"name":"elongated meiosis II spindle","type":"exact"},{"name":"long spindle during meiosis II","type":"exact"},{"name":"long spindle during second meiotic nuclear division","type":"exact"},{"name":"meiosis II spindle overextension","type":"exact"}],"termid":"FYPO:0002222"}


id: PBO:0061788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast stimulatory transmembrane protein","termid":"PBO:0061788"}


id: PBO:0050955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma receptor 1","termid":"PBO:0050955"}


id: PBO:0005871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"21S rRNA","termid":"PBO:0005871"}


