# terms

id: GO:0030699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl phosphate + H2O + NH4 + thioredoxin disulfide = glycine + H+ + phosphate + thioredoxin.","definition_xrefs":["RHEA:12232","EC:1.21.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor","termid":"GO:0050485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycine reductase activity","secondary_identifiers":["MetaCyc:RXN-7566","KEGG_REACTION:R07226"],"synonyms":[{"name":"acetyl-phosphate ammonia:thioredoxin disulfide oxidoreductase (glycine-forming)","type":"related"}],"termid":"GO:0030699"}


id: PBO:0057862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3173","termid":"PBO:0057862"}


id: PBO:0087991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase; deaminates adenosine-37 to inosine in tRNA-Ala","termid":"PBO:0087991"}


id: PBO:0087949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4G and scaffold protein; subunit of the mRNA cap-binding protein complex (eIF4F) with eIF4E (Cdc33p) and eIF4A (Tif1p/Tif2p); proposed to stimulate the ATPase and helicase activities of eIF4A synergistically with eIF4G based on sequence similarity with Tif4631p; proposed to be required with eIF4E for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; associated with Pab1p-mediated poly(A)-tail stimulated, translation","termid":"PBO:0087949"}


id: PBO:0079317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 8B","termid":"PBO:0079317"}


id: PBO:0058386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4758","termid":"PBO:0058386"}


id: PBO:0044515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CZIB divergent transcript","termid":"PBO:0044515"}


id: GO:0022004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process occurring after the brain has been specified along the neural axis that is required for the midbrain-hindbrain boundary to attain its fully functional state. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","PMID:15541513","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary maturation","termid":"GO:0021732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary maturation during brain development","termid":"GO:0022004"}


id: PBO:0056399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE3 antisense RNA 1","termid":"PBO:0056399"}


id: GO:1990895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell cortex of cell tip.","definition_xrefs":["PMID:26150232","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex","termid":"GO:1904776"},{"relation_name":"regulates","term_name":"protein localization to cell cortex of cell tip","termid":"GO:1990896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell cortex of cell tip","termid":"GO:1990895"}


id: PBO:0030024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shmoo_formation_in_absence_of_opposite_mating_type","termid":"PBO:0030024"}


id: FYECO:0000294
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a high temperature followed by growth at low temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, high to low","termid":"FYECO:0000294"}


id: PBO:0067290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 375, pseudogene","termid":"PBO:0067290"}


id: GO:0017032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + K+(out) = amino acid(in) + K+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:monoatomic cation symporter activity","termid":"GO:0005416"},{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"amino acid:potassium symporter activity","synonyms":[{"name":"potassium:amino acid symporter activity","type":"exact"}],"termid":"GO:0017032"}


id: PBO:0060170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maturin, neural progenitor differentiation regulator homolog","termid":"PBO:0060170"}


id: GO:0035959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the glyoxylate cycle by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:19686338","GOC:dgf","PMID:17875938","PMID:11024040"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035959)","synonyms":[{"name":"positive regulation of glyoxylate bypass by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035959"}


id: PBO:0089792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit 7a","termid":"PBO:0089792"}


id: GO:0030320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of monovalent inorganic anions at the level of a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular monovalent inorganic anion homeostasis (obsolete GO:0030320)","termid":"GO:0030320"}


id: GO:0005891
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95747],"is_not":false,"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel complex","termid":"GO:0034704"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"voltage-gated calcium channel complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"voltage gated calcium channel complex","type":"exact"},{"name":"voltage-dependent calcium channel complex","type":"exact"},{"name":"voltage-sensitive calcium channel complex","type":"exact"}],"termid":"GO:0005891","terms_by_termid":{"GO:0005891":null}}


id: FYPO:0000482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"},{"relation_name":"is_a","term_name":"decreased DNA recombination during vegetative growth","termid":"FYPO:0002340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitotic recombination","synonyms":[{"name":"decreased mitotic recombination during mitotic cell cycle","type":"related"},{"name":"decreased mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: decreased","type":"related"},{"name":"reduced mitotic recombination","type":"exact"}],"termid":"FYPO:0000482"}


id: PBO:0028679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_subtelomeric_heterochromatin","termid":"PBO:0028679"}


id: PBO:0049160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 2","termid":"PBO:0049160"}


id: PBO:0085600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cell separation during budding; one of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implicated in APC/cyclosome regulation; may play an indirect role in fluid-phase endocytosis; protein abundance increases in response to DNA replication stress; SDS24 has a paralog, SDS23, that arose from the whole genome duplication","termid":"PBO:0085600"}


id: PBO:0066456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 9, pseudogene","termid":"PBO:0066456"}


id: FYPO:0001871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype in which cells adhere to other cells of compatible mating type more strongly or to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion","termid":"FYPO:0001872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased agglutination","synonyms":[{"name":"increased agglutination involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0001871"}


id: PBO:0003106
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic loci regulator","termid":"PBO:0003106"}


id: PBO:0071943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 20","termid":"PBO:0071943"}


id: GO:0140267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into the cytoplasm of a host cell, triggered by an interaction between the bilayer of a host membrane and a membrane-penetration symbiont protein. This process mediates the entry of some non-enveloped virus into host cells, and results in the release of the virus contents into the host cell cytoplasm.","definition_xrefs":["PMID:20427561","PMID:25055856","VZ:985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of host membrane","synonyms":[{"name":"viral entry via permeabilization of host membrane","type":"narrow"}],"termid":"GO:0140267"}


id: PBO:0071808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 3","termid":"PBO:0071808"}


id: PR:O94710
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.10","secondary_identifiers":["UniProtKB:O94710"],"synonyms":[{"name":"N6-L-threonylcarbamoyladenine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-OSGEPL1","type":"exact"},{"name":"pombe glycoprotease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A37 threonylcarbamoyladenosine biosynthesis protein pgp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA threonylcarbamoyladenosine biosynthesis protein pgp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94710"}


id: PBO:0027596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mononucleate_multiseptate_vegetative_cell","termid":"PBO:0027596"}


id: PBO:0005582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase","termid":"PBO:0005582"}


id: MOD:01430
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms an adduct with a (13)C labeled compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O isotope tagged reagent","termid":"MOD:01430"}


id: PBO:0088813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog Aah2","termid":"PBO:0088813"}


id: PBO:0069903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1194, pseudogene","termid":"PBO:0069903"}


id: SO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is acylated.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001721 H3K27_acylation_site (obsolete SO:0001721)","synonyms":[{"name":"H3K27 acylation site","type":"exact"},{"name":"H3K27Ac","type":"related"}],"termid":"SO:0001721"}


id: GO:0019645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors other than oxygen to generate a transmembrane electrochemical gradient.","definition_xrefs":["GOC:ai","GOC:mtg_electron_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"},{"relation_name":"part_of","term_name":"anaerobic respiration","termid":"GO:0009061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"anaerobic electron transport chain","termid":"GO:0019645"}


id: GO:0030827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cGMP biosynthetic process (obsolete GO:0030827)","synonyms":[{"name":"down regulation of cGMP biosynthetic process","type":"exact"},{"name":"down-regulation of cGMP biosynthetic process","type":"exact"},{"name":"downregulation of cGMP biosynthetic process","type":"exact"},{"name":"inhibition of cGMP biosynthetic process","type":"narrow"},{"name":"negative regulation of cGMP anabolism","type":"exact"},{"name":"negative regulation of cGMP biosynthesis","type":"exact"},{"name":"negative regulation of cGMP formation","type":"exact"},{"name":"negative regulation of cGMP synthesis","type":"exact"}],"termid":"GO:0030827"}


id: PBO:0039204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 7","termid":"PBO:0039204"}


id: PBO:0081655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 580","termid":"PBO:0081655"}


id: PBO:0043170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 interacting protein","termid":"PBO:0043170"}


id: PBO:0051921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 4","termid":"PBO:0051921"}


id: PBO:0065233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 1","termid":"PBO:0065233"}


id: FYPO:0000739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the occurrence of pigment accumulation in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"cellular pigment accumulation phenotype","synonyms":[{"name":"cellular pigment accumulation phenotype during mitotic cell cycle","type":"related"},{"name":"cellular pigment accumulation phenotype during vegetative growth","type":"exact"},{"name":"fission yeast cellular pigment accumulation phenotype","type":"exact"}],"termid":"FYPO:0000739"}


id: PBO:0039524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 5","termid":"PBO:0039524"}


id: GO:0009052
data:
  {"annotated_genes":["SJAG_04263","SJAG_00070","SJAG_00501","SJAG_03934"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85105,92494,104535,109927],"is_not":false,"summary":null,"term":"GO:0009052"}]},"cv_name":"biological_process","definition":"The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P.","definition_xrefs":["ISBN:0198506732","MetaCyc:NONOXIPENT-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"part_of","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_03934":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pentose-phosphate shunt, non-oxidative branch","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-8178"],"synonyms":[{"name":"pentose phosphate pathway, non-oxidative branch","type":"exact"},{"name":"pentose phosphate shunt, non-oxidative branch","type":"exact"},{"name":"pentose-phosphate pathway, non-oxidative branch","type":"exact"}],"termid":"GO:0009052","terms_by_termid":{"GO:0009052":null}}


id: GO:0015087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cobalt (Co2+) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cobalt ion transmembrane transporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-141A","RHEA:28578"],"synonyms":[{"name":"cobalt, zinc uptake permease activity","type":"related"},{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"related"}],"termid":"GO:0015087"}


id: PBO:0056941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-1 host gene","termid":"PBO:0056941"}


id: PBO:0067075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 106, pseudogene","termid":"PBO:0067075"}


id: GO:0048887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cupula development","termid":"GO:0048887"}


id: GO:0003959
data:
  {"annotated_genes":["SJAG_05015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103170],"is_not":false,"summary":null,"term":"GO:0003959"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + acceptor = NADP+ + reduced acceptor.","definition_xrefs":["RHEA:13149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NADPH dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9027625","EC:1.6.99.1","Reactome:R-HSA-9018901","Reactome:R-HSA-9027631","MetaCyc:NADPH-DEHYDROGENASE-RXN","GO:0008468","UM-BBD_enzymeID:e0523","GO:0016660","Reactome:R-HSA-9018867","Reactome:R-HSA-9027632"],"synonyms":[{"name":"NADPH diaphorase activity","type":"related"},{"name":"NADPH-dehydrogenase activity","type":"related"},{"name":"NADPH2 diaphorase activity","type":"related"},{"name":"NADPH2-dehydrogenase activity","type":"related"},{"name":"NADPH:(acceptor) oxidoreductase activity","type":"related"},{"name":"NADPH:acceptor oxidoreductase activity","type":"related"},{"name":"OYE","type":"related"},{"name":"TPNH dehydrogenase activity","type":"related"},{"name":"TPNH-diaphorase activity","type":"related"},{"name":"dihydronicotinamide adenine dinucleotide phosphate dehydrogenase activity","type":"related"},{"name":"old yellow enzyme","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate dehydrogenase activity","type":"related"},{"name":"triphosphopyridine diaphorase activity","type":"related"},{"name":"triphosphopyridine nucleotide diaphorase activity","type":"related"}],"termid":"GO:0003959","terms_by_termid":{"GO:0003959":null}}


id: PBO:0055624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3063","termid":"PBO:0055624"}


id: PBO:0070124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 38 pseudogene","termid":"PBO:0070124"}


id: PBO:0068933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 176, pseudogene","termid":"PBO:0068933"}


id: PBO:0045927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain family member B","termid":"PBO:0045927"}


id: PBO:0056010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 1","termid":"PBO:0056010"}


id: GO:0019790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-like hydrolase activity (obsolete GO:0019790)","synonyms":[{"name":"ubiquitin-like hydrolase activity","type":"exact"}],"termid":"GO:0019790"}


id: PBO:0053216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 13","termid":"PBO:0053216"}


id: PBO:0061536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear speckle splicing regulatory protein 1 pseudogene 1","termid":"PBO:0061536"}


id: PBO:0082398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p); involved in protein translocation into the endoplasmic reticulum; interacts with the exocyst complex and also with Rtn1p; cotranslationally N-acetylated by NatA; SBH1 has a paralog, SBH2, that arose from the whole genome duplication","termid":"PBO:0082398"}


id: GO:0003932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete SAR small monomeric GTPase activity (obsolete GO:0003932)","synonyms":[{"name":"SAR small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003932"}


id: PBO:0029513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_stubby_vegetative_cell_population_(obsolete_FYPO:0002201)","termid":"PBO:0029513"}


id: PATO:0000683
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000683 relative temporal value (obsolete PATO:0000683)","termid":"PATO:0000683"}


id: PBO:0057333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520h","termid":"PBO:0057333"}


id: PBO:0049806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1 pseudogene 1","termid":"PBO:0049806"}


id: PBO:0041356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4B antisense RNA 1","termid":"PBO:0041356"}


id: PBO:0071365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 24","termid":"PBO:0071365"}


id: PBO:0036311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd3b (predicted)","termid":"PBO:0036311"}


id: GO:1904363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcitonin secretion.","definition_xrefs":["PMID:11278900","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"is_a","term_name":"regulation of calcitonin secretion","termid":"GO:1904362"},{"relation_name":"negatively_regulates","term_name":"calcitonin secretion","termid":"GO:0036161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of calcitonin secretion","synonyms":[{"name":"down regulation of calcitonin secretion","type":"exact"},{"name":"down-regulation of calcitonin secretion","type":"exact"},{"name":"downregulation of calcitonin secretion","type":"exact"},{"name":"inhibition of calcitonin secretion","type":"narrow"}],"termid":"GO:1904363"}


id: GO:0033080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an immature T cell population by cell division in the thymus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature T cell proliferation","termid":"GO:0033079"},{"relation_name":"part_of","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature T cell proliferation in thymus","synonyms":[{"name":"thymic T cell proliferation","type":"exact"},{"name":"thymocyte cell proliferation","type":"exact"},{"name":"thymocyte proliferation","type":"exact"}],"termid":"GO:0033080"}


id: PBO:0078029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 19 (non-functional)","termid":"PBO:0078029"}


id: GO:0052905
data:
  {"annotated_genes":["SJAG_04993"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95528],"is_not":false,"summary":null,"term":"GO:0052905"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine9 in tRNA + S-adenosyl-L-methionine = H+ + N1-methylguanosine9 in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:43156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0016741","GO:0016740","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"tRNA (guanosine(9)-N1)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.221","Reactome:R-HSA-6786621","MetaCyc:RXN-12459","Reactome:R-HSA-6787591"],"synonyms":[{"name":"tRNA (guanine(9)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanine-N(1)-)-methyltransferase activity","type":"related"},{"name":"tRNA (guanosine(9)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(9)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA m(1)G(9) Mtase activity","type":"related"},{"name":"tRNA m(1)G(9)-methyltransferase activity","type":"related"},{"name":"tRNA(m(1)G(9)/m(1)A(9))-methyltransferase activity","type":"related"},{"name":"tRNA(m(1)G(9)/m(1)A(9))Mtase activity","type":"related"}],"termid":"GO:0052905","terms_by_termid":{"GO:0052905":null}}


id: PBO:0072338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 24","termid":"PBO:0072338"}


id: PBO:0080612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 46","termid":"PBO:0080612"}


id: GO:0034923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene-4,5-dicarboxylate + H+ = phenanthrene-4-carboxylate + CO2.","definition_xrefs":["UM-BBD_reactionID:r0937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenanthrene-4,5-dicarboxylate decarboxylase activity","termid":"GO:0034923"}


id: PBO:0014601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase/mitochondrial ribosomal protein subunit L21, fusion protein (predicted)","termid":"PBO:0014601"}


id: PBO:0075862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 1","termid":"PBO:0075862"}


id: PBO:0066544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 8","termid":"PBO:0066544"}


id: PBO:0059380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 5","termid":"PBO:0059380"}


id: GO:1905796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intraciliary anterograde transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27930654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"intraciliary anterograde transport","termid":"GO:0035720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intraciliary anterograde transport","synonyms":[{"name":"regulation of intraflagellar anterograde transport","type":"exact"}],"termid":"GO:1905796"}


id: PATO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour to progress or fail to progress during it's life time.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0002095 neoplasm disposition (obsolete PATO:0002095)","termid":"PATO:0002095"}


id: PBO:0060870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member B","termid":"PBO:0060870"}


id: GO:0033869
data:
  {"annotated_genes":["SJAG_02247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside bisphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleoside bisphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside bisphosphate breakdown","type":"exact"},{"name":"nucleoside bisphosphate catabolism","type":"exact"},{"name":"nucleoside bisphosphate degradation","type":"exact"}],"termid":"GO:0033869","terms_by_termid":{"GO:0015938":null}}


id: GO:0005726
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structures of variable diameter visible in the nucleoplasm by electron microscopy, mainly observed near the border of condensed chromatin. The fibrils are enriched in RNA, and are believed to be sites of pre-mRNA splicing and polyadenylylation representing the in situ form of nascent transcripts.","definition_xrefs":["PMID:14731598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"perichromatin fibrils","termid":"GO:0005726"}


id: MOD:00038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.","definition_xrefs":["RESID:AA0029","PubMed:3734192","ChEBI:16889","PubMed:4343807","PubMed:2400108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-proline","synonyms":[{"name":"(2S,3S)-3-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"3-hydroxy-L-proline","type":"exact"},{"name":"3-hydroxylated L-proline","type":"exact"},{"name":"3-trans-hydroxy-L-proline","type":"exact"},{"name":"3HyPro","type":"exact"},{"name":"L-threo-3-hydroxyproline","type":"exact"},{"name":"MOD_RES 3-hydroxyproline","type":"exact"},{"name":"beta-hydroxypyrrolidine-alpha-carboxylic acid","type":"exact"}],"termid":"MOD:00038"}


id: GO:0099602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function that directly (via physical interaction or direct modification) activates, inhibits or otherwise modulates the activity of a neurotransmitter receptor. Modulation of activity includes changes in desensitization rate, ligand affinity, ion selectivity and pore-opening/closing.","definition_xrefs":["GOC:dos","PMID:12740117","PMID:18387948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor regulator activity","termid":"GO:0030545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"neurotransmitter receptor regulator activity","termid":"GO:0099602"}


id: PBO:0060052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 40","termid":"PBO:0060052"}


id: GO:0103011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + beta-D-fructofuranose 6-phosphate = mannosylfructose-phosphate + GDP.","definition_xrefs":["EC:2.4.1.246","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"mannosylfructose-phosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-9935","RHEA:26039"],"termid":"GO:0103011"}


id: FYPO:0005312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which establishment of mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Establishment of mitotic sister chromatid cohesion is the process in which the sister chromatids of a replicated chromosome become joined along the entire length of the chromosome during S phase of the mitotic cell cycle.","definition_xrefs":["GO:0034087","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal establishment of mitotic sister chromatid cohesion","synonyms":[{"name":"normal establishment of mitotic chromosome cohesion","type":"exact"},{"name":"normal establishment of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal establishment of sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005312"}


id: GO:0044876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 L-selenocysteine + 2 hercynine + O2 = 2 H2O + 2 hercynylselenocysteine.","definition_xrefs":["GOC:jl","PMID:24828577"],"gene_count":0,"genotype_count":0,"name":"obsolete hercynylselenocysteine synthase (obsolete GO:0044876)","secondary_identifiers":["MetaCyc:RXN-15803"],"termid":"GO:0044876"}


id: PBO:0071222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 63","termid":"PBO:0071222"}


id: PBO:0036168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytoplasmic_microtubule_nucleation_from_spindle_pole_body_during_mitotic_interphase","termid":"PBO:0036168"}


id: PR:O60169
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19F8.05 gene.","definition_xrefs":["UniProtKB:O60169","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19F8.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.05","synonyms":[{"name":"Spom972h-SPBC19F8.05","type":"exact"}],"termid":"PR:O60169"}


id: GO:1990893
data:
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id: PR:O94583
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1442.11c gene.","definition_xrefs":["UniProtKB:O94583","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1442.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.11c","synonyms":[{"name":"Spom972h-SPCC1442.11c","type":"exact"}],"termid":"PR:O94583"}


id: PBO:0069300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 556, pseudogene","termid":"PBO:0069300"}


id: GO:0090579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation and maintenance of DNA loops that juxtapose separated regions on the same dsDNA molecule.","definition_xrefs":["PMID:15950878","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete dsDNA loop formation (obsolete GO:0090579)","synonyms":[{"name":"chromatin looping","type":"related"},{"name":"dsDNA looping","type":"exact"}],"termid":"GO:0090579"}


id: PBO:0030070
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id: GO:0010234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a tapetal cell of anthers in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"anther wall tapetum cell differentiation","termid":"GO:0048657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum cell fate specification","synonyms":[{"name":"tapetal cell fate specification","type":"broad"}],"termid":"GO:0010234"}


id: PBO:0113187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysolipid acyltransferase; involved in the synthesis of phosphatidic acid from 1-acyl-2-hydroxy-sn-glycero-3-phosphate using oleoyl-CoA as acyl donor and in phospholipid remodeling, incorporating palmitic acid into the sn-1 position of phosphatidylserine and phosphatidylethanolamine; localizes to ER membranes associated with mitochondria (MAMs); contains three predicted transmembrane domains; similar to C. elegans F55A11.5 and maize 1-acyl-glycerol-3-phosphate acyltransferase","termid":"PBO:0113187"}


id: PBO:0087801
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored ER membrane protein of unknown function; substrate of the phosphatase calcineurin; interacts with homolog Frt2p; promotes cell growth in stress conditions, possibly via a role in posttranslational translocation; FRT1 has a paralog, FRT2, that arose from the whole genome duplication","termid":"PBO:0087801"}


id: PBO:0079418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 1","termid":"PBO:0079418"}


id: PBO:0079681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3B","termid":"PBO:0079681"}


id: MOD:01505
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01505"}


id: GO:2000010
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id: PBO:0088474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Erg28 protein","termid":"PBO:0088474"}


id: PBO:0015216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, ubiquitin-protein ligase E3","termid":"PBO:0015216"}


id: PBO:0111930
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZnF type","termid":"PBO:0111930"}


id: PBO:0109609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A24","termid":"PBO:0109609"}


id: GO:0010952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of peptidase activity, the hydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteolysis","termid":"GO:0045862"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidase activity","termid":"GO:0010952"}


id: PBO:0036136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2B-K119_ubiquitination_during_vegetative_growth","termid":"PBO:0036136"}


id: GO:0140281
data:
  {"annotated_genes":["SJAG_01805","SJAG_04468","SJAG_03342","SJAG_00514","SJAG_03704","SJAG_01188","SJAG_04666","SJAG_01114","SJAG_03631","SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85395,86025,88540,89931,101277,102482,103153,109474,111568,113974],"is_not":false,"summary":null,"term":"GO:0140281"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic division septum formation. Division septum formation is the assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of division septum assembly","termid":"GO:0010973"},{"relation_name":"is_a","term_name":"regulation of mitotic division septum assembly","termid":"GO:0140279"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"positively_regulates","term_name":"mitotic division septum assembly","termid":"GO:0140278"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01805":null,"SJAG_03342":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_04468":null,"SJAG_04666":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044085","GO:0000281"],"is_obsolete":false,"name":"positive regulation of mitotic division septum assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"activation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"activation of mitotic division septum assembly","type":"exact"},{"name":"activation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"activation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"related"},{"name":"up regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of mitotic division septum assembly","type":"exact"},{"name":"up regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of mitotic division septum assembly","type":"exact"},{"name":"up-regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"}],"termid":"GO:0140281","terms_by_termid":{"GO:0140281":null}}


id: PBO:0024818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of cut TWenty","termid":"PBO:0024818"}


id: FYPO:0007327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype which the total amount of DNA in a cell is lower than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered DNA level","termid":"FYPO:0004320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"DNA content decreased during G0","synonyms":[{"name":"DNA content decreased during quiescence","type":"exact"},{"name":"DNA content reduced during G0","type":"exact"},{"name":"decreased DNA content during cell quiescence","type":"exact"},{"name":"decreased DNA level during G0","type":"exact"}],"termid":"FYPO:0007327"}


id: GO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of T cell receptor genes. N regions are found at the V-D, D-D, V-J, and D-J recombinational junctions, depending on the T cell receptor gene.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of T cell receptor genes","termid":"GO:0002568"},{"relation_name":"is_a","term_name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"},{"relation_name":"part_of","term_name":"somatic recombination of T cell receptor gene segments","termid":"GO:0002681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"somatic diversification of T cell receptor genes by N region addition","synonyms":[{"name":"somatic diversification of TCR genes by N region addition","type":"exact"}],"termid":"GO:0002571"}


id: PBO:0005547
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.48","termid":"PBO:0005547"}


id: PATO:0000926
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000926 intercross fertility (obsolete PATO:0000926)","termid":"PATO:0000926"}


id: GO:0160155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The autophagic process which involves the direct fusion of abnormal, excess or obsolete secretory granules with lysosomes. This pathway is often associated with maintaining homeostasis in endocrine and exocrine cells.","definition_xrefs":["PMID:29066608","PMID:35452619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044248"],"is_obsolete":false,"name":"crinophagy","termid":"GO:0160155"}


id: GO:0090416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nicotinate from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"nicotinate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-8869603"],"termid":"GO:0090416"}


id: PBO:0036002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_sumoylation_during_vegetative_growth","termid":"PBO:0036002"}


id: PBO:0050177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 4","termid":"PBO:0050177"}


id: PR:Q9HE08
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methylthioribulose-1-phosphate dehydratase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10640:SF2","OMA:SCHPO00873","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribulose-1-phosphate dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.05c","secondary_identifiers":["UniProtKB:Q9HE08"],"synonyms":[{"name":"MTRu-1-P dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-APIP","type":"exact"}],"termid":"PR:Q9HE08"}


id: PBO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein","termid":"PBO:0000190"}


id: SO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recombinationally rearranged gene of the vertebrate immune system.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombinationally_rearranged_gene","termid":"SO:0000456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombinationally_rearranged_vertebrate_immune_system_gene","synonyms":[{"name":"recombinationally rearranged vertebrate immune system gene","type":"exact"}],"termid":"SO:0000941"}


id: PBO:0050737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1","termid":"PBO:0050737"}


id: GO:0048447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the sepal are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"sepal development","termid":"GO:0048442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal morphogenesis","secondary_identifiers":["GO:0048422"],"termid":"GO:0048447"}


id: SO:0002211
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A self replicating circular nucleic acid molecule that is distinct from a chromosome in the organism.","definition_xrefs":["PMID:21719542","SBOL:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid","termid":"SO:0000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_plasmid","synonyms":[{"name":"circular plasmid","type":"exact"}],"termid":"SO:0002211"}


id: GO:0048698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of collateral sprouting in the absence of injury.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of collateral sprouting","termid":"GO:0048671"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting in absence of injury","termid":"GO:0048696"},{"relation_name":"negatively_regulates","term_name":"collateral sprouting in absence of injury","termid":"GO:0048669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collateral sprouting in absence of injury","synonyms":[{"name":"down regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"down-regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"downregulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"inhibition of collateral sprouting in the absence of injury","type":"narrow"}],"termid":"GO:0048698"}


id: GO:0044431
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the Golgi apparatus, a compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi apparatus part (obsolete GO:0044431)","synonyms":[{"name":"Golgi component","type":"exact"},{"name":"Golgi subcomponent","type":"exact"}],"termid":"GO:0044431"}


id: PBO:0059890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 13","termid":"PBO:0059890"}


id: PR:Q9P7M5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13305:SF0","OMA:SCHPO00663","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.13c","secondary_identifiers":["UniProtKB:Q9P7M5"],"synonyms":[{"name":"Spom972h-NOP10","type":"exact"},{"name":"nucleolar protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nucleolar protein family A member 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"snoRNP protein nop10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7M5"}


id: PBO:0045306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 1","termid":"PBO:0045306"}


id: PBO:0047095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 149 member A","termid":"PBO:0047095"}


id: GO:0034571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4'-(2-hydroxyisopropyl)phenylurea + H2O = 4'-(2-hydroxyisopropyl)phenylaniline + carbamic acid.","definition_xrefs":["UM-BBD_reactionID:r0895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"4'-(2-hydroxyisopropyl)phenylurea amidohydrolase activity","termid":"GO:0034571"}


id: PBO:0090326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lgl family protein Sro7","termid":"PBO:0090326"}


id: RO:0002103
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between an anatomical structure (including cells) and a neuron that chemically synapses to it. ","direct_ancestors":[{"relation_name":"is_a","term_name":"upstream_in_neural_circuit_with","termid":"RO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_by","termid":"RO:0002103"}


id: GO:0034411
data:
  {"annotated_genes":["SJAG_04483","SJAG_01787","SJAG_01288","SJAG_00876","SJAG_04666","SJAG_00610","SJAG_05285","SJAG_04668","SJAG_01835","SJAG_03705","SJAG_01290","SJAG_03587","SJAG_04771","SJAG_00218","SJAG_04462","SJAG_02222"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[102203,87711,87721,109278,105414,111922,84243,103887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[83689,88542],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[88528,88544,98965,86917,101442,113988],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan biosynthetic process","termid":"GO:0006075"},{"relation_name":"is_a","term_name":"cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0034407"},{"relation_name":"is_a","term_name":"cell wall beta-glucan biosynthetic process","termid":"GO:0034410"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"cell wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall 1,3-beta-D-glucan biosynthetic process","type":"broad"},{"name":"cell wall 1,3-beta-glucan anabolism","type":"exact"},{"name":"cell wall 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"cell wall 1,3-beta-glucan biosynthetic process","type":"broad"},{"name":"cell wall 1,3-beta-glucan formation","type":"exact"},{"name":"cell wall 1,3-beta-glucan synthesis","type":"exact"},{"name":"cell wall beta-1,3-glucan anabolism","type":"exact"},{"name":"cell wall beta-1,3-glucan biosynthesis","type":"exact"},{"name":"cell wall beta-1,3-glucan biosynthetic process","type":"exact"},{"name":"cell wall beta-1,3-glucan formation","type":"exact"},{"name":"cell wall beta-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0034411","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0039506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in the function of a host protein via a direct interaction.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host molecular function (obsolete GO:0039506)","synonyms":[{"name":"modification by virus of host protein function","type":"exact"}],"termid":"GO:0039506"}


id: PBO:0087996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE protein required for retrograde vesicular traffic; involved in Sey1p-independent homotypic ER fusion; required for efficient nuclear fusion during mating; forms a complex with the SNAREs Sec22p, Sec20p and Use1p to mediate fusion of Golgi-derived vesicles at the ER","termid":"PBO:0087996"}


id: GO:0061072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the iris is generated and organized. The iris is an anatomical structure in the eye whose opening forms the pupil. The iris is responsible for controlling the diameter and size of the pupil and the amount of light reaching the retina.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iris morphogenesis","termid":"GO:0061072"}


id: PBO:0055738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lemur tyrosine kinase 2","termid":"PBO:0055738"}


id: PBO:0065415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta 3 pseudogene 1","termid":"PBO:0065415"}


id: GO:0071139
data:
  {"annotated_genes":["SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071140"}]},"cv_name":"biological_process","definition":"The cleavage and rejoining of intermediates, such as Holliday junctions, formed during DNA recombination to produce two intact molecules in which genetic material has been exchanged.","definition_xrefs":["GOC:vw","GOC:mah","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"resolution of DNA recombination intermediates","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"resolution of recombination intermediates","type":"exact"}],"termid":"GO:0071139","terms_by_termid":{"GO:0071140":null}}


id: PBO:0089050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2',3'-cyclic-nucleotide 3'-phosphodiesterase","termid":"PBO:0089050"}


id: GO:1902596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication origin binding.","definition_xrefs":["PMID:11850415","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"regulation of DNA replication origin binding","termid":"GO:1902595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA replication origin binding","synonyms":[{"name":"down regulation of ARS binding","type":"narrow"},{"name":"down regulation of DNA replication origin binding","type":"exact"},{"name":"down-regulation of ARS binding","type":"narrow"},{"name":"down-regulation of DNA replication origin binding","type":"exact"},{"name":"downregulation of ARS binding","type":"narrow"},{"name":"downregulation of DNA replication origin binding","type":"exact"},{"name":"inhibition of ARS binding","type":"narrow"},{"name":"inhibition of DNA replication origin binding","type":"narrow"},{"name":"negative regulation of ARS binding","type":"narrow"}],"termid":"GO:1902596"}


id: FYPO:0004111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitotic G2 phase","synonyms":[{"name":"decreased protein phosphorylation during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during mitotic G2-phase","type":"exact"},{"name":"decreased protein/peptide phosphorylation during mitotic G2 phase","type":"exact"},{"name":"reduced protein phosphorylation during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0004111"}


id: GO:0030365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A factor is necessary for cleavage but not for poly(A) addition in mRNA 3' end processing; can stimulate poly(A) addition on substrates with a CstF binding site upstream of the AAUAAA hexanucleotide.","definition_xrefs":["PMID:10357856"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage stimulation factor activity (obsolete GO:0030365)","synonyms":[{"name":"CstF","type":"exact"},{"name":"cleavage stimulation factor activity","type":"exact"}],"termid":"GO:0030365"}


id: GO:1900935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene metabolic process","termid":"GO:1900932"},{"relation_name":"regulates","term_name":"nonadec-1-ene biosynthetic process","termid":"GO:1900877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nonadec-1-ene biosynthetic process","synonyms":[{"name":"regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"regulation of nonadec-1-ene formation","type":"exact"},{"name":"regulation of nonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900935"}


id: FYPO:0001093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which chromatin binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished chromatin binding","synonyms":[{"name":"abolished chromatin association","type":"exact"},{"name":"chromatin binding abolished","type":"exact"}],"termid":"FYPO:0001093"}


id: GO:0034489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neutral amino acids out of the vacuole, across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"neutral amino acid transmembrane export from vacuole","termid":"GO:0034489"}


id: PR:P87061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip elongation aberrant protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.06","synonyms":[{"name":"Spom972h-tea1","type":"exact"},{"name":"altered polarity protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cell polarity protein tea1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87061"}


id: GO:0003047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by the catecholamine signaling molecule epinephrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by epinephrine","synonyms":[{"name":"blood pressure regulation by epinephrine","type":"related"},{"name":"regulation of blood pressure by adrenaline","type":"exact"}],"termid":"GO:0003047"}


id: PBO:0072857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcosine dehydrogenase","termid":"PBO:0072857"}


id: PBO:0043752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7C","termid":"PBO:0043752"}


id: PBO:0043559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL5A1 antisense RNA 1","termid":"PBO:0043559"}


id: GO:0047124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,5S)-3,5-diaminohexanoate + H2O + NAD+ = (S)-5-amino-3-oxo-hexanoate + H+ + NADH + NH4.","definition_xrefs":["EC:1.4.1.11","RHEA:19633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-erythro-3,5-diaminohexanoate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.4.1.11-RXN","KEGG_REACTION:R03349"],"synonyms":[{"name":"L-3,5-diaminohexanoate dehydrogenase activity","type":"related"},{"name":"L-erythro-3,5-diaminohexanoate:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0047124"}


id: PBO:0083718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein with chaperone and co-chaperone activity; involved in retention of resident ER proteins; has a role in recognizing proteins targeted for ER-associated degradation (ERAD), member of the protein disulfide isomerase family","termid":"PBO:0083718"}


id: FYPO:0006235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of any macromolecular complex present in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal level of macromolecular complex","synonyms":[{"name":"normal level of macromolecular complex during mitotic cell cycle","type":"related"},{"name":"normal level of macromolecular complex during vegetative growth","type":"exact"}],"termid":"FYPO:0006235"}


id: PBO:0087154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA export factor associated with the nuclear pore complex (NPC); associates with NUP116p; required for polyadenylated RNA export but not for protein import; homologous to S. pombe Rae1p and human RAE1","termid":"PBO:0087154"}


id: PBO:0084843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; has similarity to E. coli L4 ribosomal protein and human mitoribosomal MRP-L4 protein; essential for viability, unlike most other mitoribosomal proteins","termid":"PBO:0084843"}


id: GO:0051160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-xylitol, a five-carbon sugar alcohol derived from xylose by reduction of the carbonyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol catabolic process","termid":"GO:0019527"},{"relation_name":"is_a","term_name":"L-xylitol metabolic process","termid":"GO:0051164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-xylitol catabolic process","synonyms":[{"name":"L-xylitol breakdown","type":"exact"},{"name":"L-xylitol catabolism","type":"exact"},{"name":"L-xylitol degradation","type":"exact"}],"termid":"GO:0051160"}


id: GO:1904962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicle-mediated and directed movement of substances from plastid to vacuole.","definition_xrefs":["PMID:25281689","GO_REF:0000076","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"plastid to vacuole vesicle-mediated transport","synonyms":[{"name":"plastid to vacuolar carboxypeptidase Y vesicle-mediated transport","type":"related"}],"termid":"GO:1904962"}


id: GO:0009453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates.","definition_xrefs":["GOC:jl","PMID:11029423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"energy taxis","synonyms":[{"name":"energytaxis","type":"exact"},{"name":"taxis in response to energy source","type":"exact"}],"termid":"GO:0009453"}


id: GO:0043164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall of the type found in Gram-negative bacteria. The cell wall is the rigid or semi-rigid envelope lying outside the cell membrane.","definition_xrefs":["ISBN:0815108893","GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan-based cell wall biogenesis","termid":"GO:0009273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell wall biogenesis","synonyms":[{"name":"1-2nm peptidoglycan-based cell wall biogenesis","type":"exact"},{"name":"cell wall anabolism","type":"broad"},{"name":"cell wall assembly","type":"broad"},{"name":"cell wall biosynthetic process","type":"broad"},{"name":"cell wall formation","type":"broad"},{"name":"cell wall synthesis","type":"broad"}],"termid":"GO:0043164"}


id: PBO:0085585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Arf3p regulation and in transcription regulation; localizes to the nucleus and to endocytic patches; contains an N-terminal Zn-finger and ArfGAP homology domain, a C-terminal glutamine-rich region, and a UBA (ubiquitin associated) domain; gts1 mutations affect budding, cell size, heat tolerance, sporulation, life span, ultradian rhythms, endocytosis; expression oscillates in a pattern similar to metabolic oscillations","termid":"PBO:0085585"}


id: PBO:0040165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylserotonin O-methyltransferase","termid":"PBO:0040165"}


id: GO:1903053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["GOC:rl","PMID:22357537","GOC:BHF","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular matrix organization","synonyms":[{"name":"regulation of extracellular matrix organisation","type":"exact"},{"name":"regulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903053"}


id: GO:0033468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CMP-keto-3-deoxy-D-manno-octulosonic acid, a substance composed of the acidic sugar 3-deoxy-D-manno-octulosonic acid in glycosidic linkage with cytidine monophosphate.","definition_xrefs":["MetaCyc:PWY-5111","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process","termid":"GO:0033467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process","secondary_identifiers":["MetaCyc:KDOSYN-PWY","MetaCyc:PWY-1269"],"synonyms":[{"name":"CMP-KDO biosynthesis","type":"exact"},{"name":"CMP-KDO biosynthetic process","type":"exact"},{"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid anabolism","type":"exact"},{"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthesis","type":"exact"},{"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid formation","type":"exact"},{"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid synthesis","type":"exact"},{"name":"CMP-ketodeoxyoctanoate biosynthetic process","type":"related"}],"termid":"GO:0033468"}


id: PBO:0046189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 3","termid":"PBO:0046189"}


id: PBO:0053740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 965","termid":"PBO:0053740"}


id: GO:1900395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of kojic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"regulation of kojic acid biosynthetic process","termid":"GO:1900394"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"kojic acid biosynthetic process","termid":"GO:2001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of kojic acid biosynthetic process","synonyms":[{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"down regulation of C6H6O4 anabolism","type":"related"},{"name":"down regulation of C6H6O4 biosynthesis","type":"related"},{"name":"down regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"down regulation of C6H6O4 formation","type":"related"},{"name":"down regulation of C6H6O4 synthesis","type":"related"},{"name":"down regulation of kojic acid anabolism","type":"exact"},{"name":"down regulation of kojic acid biosynthesis","type":"exact"},{"name":"down regulation of kojic acid biosynthetic process","type":"exact"},{"name":"down regulation of kojic acid formation","type":"exact"},{"name":"down regulation of kojic acid synthesis","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"down-regulation of C6H6O4 anabolism","type":"related"},{"name":"down-regulation of C6H6O4 biosynthesis","type":"related"},{"name":"down-regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"down-regulation of C6H6O4 formation","type":"related"},{"name":"down-regulation of C6H6O4 synthesis","type":"related"},{"name":"down-regulation of kojic acid anabolism","type":"exact"},{"name":"down-regulation of kojic acid biosynthesis","type":"exact"},{"name":"down-regulation of kojic acid biosynthetic process","type":"exact"},{"name":"down-regulation of kojic acid formation","type":"exact"},{"name":"down-regulation of kojic acid synthesis","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"downregulation of C6H6O4 anabolism","type":"related"},{"name":"downregulation of C6H6O4 biosynthesis","type":"related"},{"name":"downregulation of C6H6O4 biosynthetic process","type":"related"},{"name":"downregulation of C6H6O4 formation","type":"related"},{"name":"downregulation of C6H6O4 synthesis","type":"related"},{"name":"downregulation of kojic acid anabolism","type":"exact"},{"name":"downregulation of kojic acid biosynthesis","type":"exact"},{"name":"downregulation of kojic acid biosynthetic process","type":"exact"},{"name":"downregulation of kojic acid formation","type":"exact"},{"name":"downregulation of kojic acid synthesis","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"inhibition of C6H6O4 anabolism","type":"related"},{"name":"inhibition of C6H6O4 biosynthesis","type":"related"},{"name":"inhibition of C6H6O4 biosynthetic process","type":"related"},{"name":"inhibition of C6H6O4 formation","type":"related"},{"name":"inhibition of C6H6O4 synthesis","type":"related"},{"name":"inhibition of kojic acid anabolism","type":"exact"},{"name":"inhibition of kojic acid biosynthesis","type":"exact"},{"name":"inhibition of kojic acid biosynthetic process","type":"narrow"},{"name":"inhibition of kojic acid formation","type":"exact"},{"name":"inhibition of kojic acid synthesis","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"negative regulation of C6H6O4 anabolism","type":"related"},{"name":"negative regulation of C6H6O4 biosynthesis","type":"related"},{"name":"negative regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"negative regulation of C6H6O4 formation","type":"related"},{"name":"negative regulation of C6H6O4 synthesis","type":"related"},{"name":"negative regulation of kojic acid anabolism","type":"exact"},{"name":"negative regulation of kojic acid biosynthesis","type":"exact"},{"name":"negative regulation of kojic acid formation","type":"exact"},{"name":"negative regulation of kojic acid synthesis","type":"exact"}],"termid":"GO:1900395"}


id: GO:0008215
data:
  {"annotated_genes":["SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses, which is involved in nucleic acid packaging. Synthesis is regulated by ornithine decarboxylase which plays a key role in control of DNA replication.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03632":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spermine metabolism","type":"exact"}],"termid":"GO:0008215","terms_by_termid":{"GO:0006597":null}}


id: GO:0090105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pancreatic E cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell development","termid":"GO:0002068"},{"relation_name":"part_of","term_name":"pancreatic epsilon cell differentiation","termid":"GO:0090104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic E cell development","termid":"GO:0090105"}


id: FYPO:0007843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in centromeric regions is normal (i.e. indistinguishable from wild type). Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["PomBase:mah","PMID:17363370","GO:0016584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning","termid":"FYPO:0000856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal nucleosome positioning at centromere","synonyms":[{"name":"normal nucleosome occupancy at centromere","type":"related"},{"name":"normal nucleosome occupancy at centromeric chromatin","type":"related"},{"name":"normal nucleosome positioning at centromeric chromatin","type":"exact"}],"termid":"FYPO:0007843"}


id: GO:0034035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a purine ribonucleoside bisphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate metabolic process","termid":"GO:0033875"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate metabolic process","termid":"GO:0034032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleoside bisphosphate metabolic process","synonyms":[{"name":"purine ribonucleoside bisphosphate metabolism","type":"exact"}],"termid":"GO:0034035"}


id: GO:0032984
data:
  {"annotated_genes":["SJAG_02812","SJAG_00308","SJAG_04841","SJAG_00286","SJAG_00642","SJAG_00597","SJAG_05296","SJAG_05025","SJAG_03232","SJAG_05265","SJAG_01894","SJAG_01224","SJAG_02189","SJAG_02336","SJAG_03025","SJAG_03380","SJAG_02624","SJAG_04038","SJAG_06309","SJAG_04312","SJAG_00279","SJAG_03126","SJAG_00206","SJAG_00338","SJAG_01696","SJAG_00723","SJAG_01993","SJAG_02704","SJAG_05221","SJAG_02433","SJAG_01518","SJAG_00840","SJAG_04909","SJAG_02560","SJAG_02700","SJAG_01297","SJAG_03345","SJAG_04283","SJAG_01252","SJAG_03658","SJAG_03949","SJAG_00330","SJAG_02699","SJAG_03301","SJAG_01653","SJAG_02314","SJAG_02601","SJAG_02414"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88658,97039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[93421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[85414,86235,109759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097352"},{"annotations":[90757],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[110427,88447,84431,95019],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[86449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"},{"annotations":[91250,105274,112133,91251,87231,90933,103281,113585,105273,92612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002184"},{"annotations":[101989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903259"},{"annotations":[104364,94748,114222,85777,100014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[91632,98187,100807,94776,92071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070126"},{"annotations":[99787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[93220,113004,86220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"},{"annotations":[104373,100022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[93755],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[97967],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031117"},{"annotations":[108072],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904595"},{"annotations":[65773,67495,90934],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045905"},{"annotations":[107822],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006449"},{"annotations":[87306,96869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035494"},{"annotations":[86340,100626,109978,83954,85156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000390"},{"annotations":[99522,61473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006415"}]},"cv_name":"biological_process","definition":"The disaggregation of a protein-containing macromolecular complex into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"protein-containing complex 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complex disassembly","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0043624","GO:0034623","GO:0043241"],"synonyms":[{"name":"cellular macromolecule complex disassembly","type":"related"},{"name":"cellular protein complex disassembly","type":"related"},{"name":"macromolecule complex disassembly","type":"related"},{"name":"protein complex disassembly","type":"exact"}],"termid":"GO:0032984","terms_by_termid":{"GO:0000390":null,"GO:0002184":null,"GO:0006337":null,"GO:0006415":null,"GO:0006449":null,"GO:0007019":null,"GO:0016240":null,"GO:0030042":null,"GO:0031117":null,"GO:0035494":null,"GO:0045905":null,"GO:0051016":null,"GO:0060172":null,"GO:0070126":null,"GO:0070462":null,"GO:0072318":null,"GO:0097352":null,"GO:0140516":null,"GO:1901098":null,"GO:1903259":null,"GO:1904595":null}}


id: GO:0014843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of satellite cell proliferation; dependent on specific growth factor activity such as fibroblast growth factors and transforming growth factor beta.","definition_xrefs":["PMID:16607119","GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle satellite cell proliferation","termid":"GO:0014842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth factor dependent regulation of skeletal muscle satellite cell proliferation","termid":"GO:0014843"}


id: PBO:0075558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm equatorial segment protein 1","termid":"PBO:0075558"}


id: PBO:0004572
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PiF1 Helicase homolog","termid":"PBO:0004572"}


id: PBO:0068653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 34, pseudogene","termid":"PBO:0068653"}


id: MOD:01595
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-114 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01595"}


id: PBO:0067824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 126","termid":"PBO:0067824"}


id: PBO:0000649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I and III subunit Rpc19","termid":"PBO:0000649"}


id: PBO:0028461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_septin_ring","termid":"PBO:0028461"}


id: SO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene caused by unequal crossing over at recombination.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene_by_unequal_crossing_over","synonyms":[{"name":"pseudogene by unequal crossing over","type":"exact"}],"termid":"SO:0000044"}


id: GO:0061180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mammary gland epithelium over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland epithelium development","synonyms":[{"name":"breast epithelium development","type":"exact"}],"termid":"GO:0061180"}


id: PBO:0057403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548h-5","termid":"PBO:0057403"}


id: PBO:0057696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1285-1","termid":"PBO:0057696"}


id: PBO:0063809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1 pseudogene 1","termid":"PBO:0063809"}


id: GO:0033190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of double bonds in prosolanapyrone II to form (-)-solanapyrone A.","definition_xrefs":["GOC:cb","PMID:9659400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0009975","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"solanapyrone synthase activity","termid":"GO:0033190"}


id: PR:Q9UT87
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- img1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein subunit img1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.02","synonyms":[{"name":"Spom972h-img1","type":"exact"}],"termid":"PR:Q9UT87"}


id: PBO:0073247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 1","termid":"PBO:0073247"}


id: GO:0055125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that forms part of the nuclear pore complex, and is required for its correct assembly. In Saccharomyces cerevisiae Nic96 contains Nsp1p, Nup57p, Nup49p, and Nic96p.","definition_xrefs":["GOC:jh","PMID:12791264","PMID:15741174"],"gene_count":0,"genotype_count":0,"name":"obsolete Nic96 complex (obsolete GO:0055125)","synonyms":[{"name":"Nic96 complex","type":"exact"}],"termid":"GO:0055125"}


id: PBO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 5","termid":"PBO:0050188"}


id: PBO:0042655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 4","termid":"PBO:0042655"}


id: PBO:0044368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic FMR1 interacting protein 1","termid":"PBO:0044368"}


id: _global:increased_in_magnitude_relative_to
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"different_in_magnitude_relative_to","termid":"_global:different_in_magnitude_relative_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_in_magnitude_relative_to","termid":"_global:increased_in_magnitude_relative_to"}


id: PATO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting an equatorial diameter greater than its polar diameter.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblate","synonyms":[{"name":"oblate spheroid","type":"exact"}],"termid":"PATO:0000409"}


id: PBO:0055839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand dependent nuclear receptor interacting factor 1","termid":"PBO:0055839"}


id: PBO:0048767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glia maturation factor beta","termid":"PBO:0048767"}


id: PBO:0051597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 22 receptor subunit alpha 1","termid":"PBO:0051597"}


id: PATO:0001922
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the rear of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised posteriorly","termid":"PATO:0001922"}


id: PBO:0082842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constitutively expressed DL-glycerol-3-phosphate phosphatase; also known as glycerol-1-phosphatase; involved in glycerol biosynthesis, induced in response to both anaerobic and osmotic stress; GPP1 has a paralog, GPP2, that arose from the whole genome duplication","termid":"PBO:0082842"}


id: GO:2000757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein acetylation","termid":"GO:1901984"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"},{"relation_name":"negatively_regulates","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-lysine acetylation","termid":"GO:2000757"}


id: PR:Q09814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tgs1 gene.","definition_xrefs":["UniProtKB:Q09814","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylguanosine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.15c","synonyms":[{"name":"Spom972h-tgs1","type":"exact"},{"name":"cap-specific guanine-N2 methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"snRNA/snoRNA cap hypermethylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09814"}


id: GO:0042892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chloramphenicol, a broad-spectrum antibiotic that inhibits bacterial protein synthesis, across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["PMID:29150447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"chloramphenicol transmembrane transport","synonyms":[{"name":"chloramphenicol transport","type":"broad"}],"termid":"GO:0042892"}


id: FYPO:0004158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which vegetative a cell is elongated, and contains more than four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PomBase:mah","PMID:21931816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell with more than four nuclei","termid":"FYPO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0000631"],"is_obsolete":false,"name":"elongated vegetative cell with fragmented septum and more than four nuclei","synonyms":[{"name":"elongated cell with fragmented septum and more than four nuclei during mitotic cell cycle","type":"related"},{"name":"elongated cell with fragmented septum and more than four nuclei during vegetative growth","type":"exact"},{"name":"long vegetative cell with fragmented septum and more than four nuclei","type":"exact"}],"termid":"FYPO:0004158"}


id: PBO:0086678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0086678"}


id: GO:0002898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of central B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell deletion","termid":"GO:0002867"},{"relation_name":"is_a","term_name":"regulation of central B cell tolerance induction","termid":"GO:0002895"},{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"regulates","term_name":"central B cell deletion","termid":"GO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of central B cell deletion","termid":"GO:0002898"}


id: PBO:0055153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2572","termid":"PBO:0055153"}


id: PBO:0045909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB6 antisense RNA 1","termid":"PBO:0045909"}


id: GO:0044093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.","definition_xrefs":["GO:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of molecular function","termid":"GO:0044093"}


id: PBO:0083883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric reductase and cupric reductase; reduces siderophore-bound iron and oxidized copper prior to uptake by transporters; expression induced by low iron levels but not by low copper levels","termid":"PBO:0083883"}


id: FYPO:0004292
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02695:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02695","name":"tip1delta","uniquename":"SJAG_02695:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004293"}],"single_locus_phenotype":[{"annotations":[115415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007801"},{"annotations":[115412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004293"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the position or morphology of all or part of the septum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_02695":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":3,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta__wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-G788E(aa)","display_uniquename":"rga4delta__wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"tip1delta":{"display_name":"tip1delta","display_uniquename":"tip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02695:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280"],"name":"abnormal septum","references_by_uniquename":{"PMID:30664646":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_02695"],"single_locus_genotype_uniquenames":["pom1delta","tip1delta"],"synonyms":[{"name":"abnormal septum physical object quality","type":"exact"}],"termid":"FYPO:0004292","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0004293":null,"FYPO:0007801":null,"FYPO_EXT:0000001":null}}


id: GO:0015968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A specific global change in the metabolism of a bacterial cell (the downregulation of nucleic acid and protein synthesis, and the simultaneous upregulation of protein degradation and amino acid synthesis) as a result of starvation.","definition_xrefs":["GOC:jl","ISBN:0124325653","PMID:11282471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stringent response","secondary_identifiers":["Wikipedia:Stringent_response"],"termid":"GO:0015968"}


id: GO:0090495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a low-density lipoprotein particle into its constituent components.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle disassembly","termid":"GO:0071829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle disassembly","termid":"GO:0090495"}


id: PBO:0048126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 7","termid":"PBO:0048126"}


id: PR:P87151
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THUMP domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03633","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C25H2.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.10c","secondary_identifiers":["UniProtKB:P87151"],"synonyms":[{"name":"Spom972h-THUMPD1","type":"exact"}],"termid":"PR:P87151"}


id: PBO:0089349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Slc1","termid":"PBO:0089349"}


id: PBO:0087577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Ada histone acetyltransferase complex; required for structural integrity of the complex; Ahc2p and Ahc1p are unique to the ADA complex and not shared with the related SAGA and SLIK complexes; Ahc2p may tether Ahc1p to the complex","termid":"PBO:0087577"}


id: PBO:0059070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 1","termid":"PBO:0059070"}


id: FYPO:0003217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the chromatin silencing at the central core of the centromeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere central core","termid":"FYPO:0000640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere central core","synonyms":[{"name":"decreased chromatin silencing at centromere central core during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere central core during vegetative growth","type":"exact"},{"name":"decreased negative regulation of transcription at centromere central core","type":"related"},{"name":"decreased transcriptional repression at centromere central core","type":"related"},{"name":"reduced chromatin silencing at centromere central core","type":"exact"}],"termid":"FYPO:0003217"}


id: PBO:0091668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing conserved fungal protein Wwm2","termid":"PBO:0091668"}


id: PATO:0000627
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern quality inhering in a bearer by virtue of the bearer's being confined or restricted to a particular location.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localized","synonyms":[{"name":"focal","type":"exact"},{"name":"localised","type":"exact"}],"termid":"PATO:0000627"}


id: SO:0002300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Transcription units or transcribed coding sequences.","definition_xrefs":["PMID:32665585","Bacterial_regulation_working_group:CMA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unit_of_gene_expression","synonyms":[{"name":"unit of gene expression","type":"exact"}],"termid":"SO:0002300"}


id: PBO:0110262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage factor and polyadenylation specificity factor complex RNA-binding protein Rna15","termid":"PBO:0110262"}


id: GO:0000810
data:
  {"annotated_genes":["SJAG_02356"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106503],"is_not":false,"summary":null,"term":"GO:0000810"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycerol 3-diphosphate + H2O = a 1,2-diacyl-sn-glycerol 3-phosphate + phosphate.","definition_xrefs":["RHEA:27449","GOC:kad","PMID:8567632","PMID:9452443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diacylglycerol diphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-11277","EC:3.6.1.75"],"synonyms":[{"name":"DGPP phosphatase activity","type":"exact"},{"name":"DGPP phosphohydrolase activity","type":"exact"},{"name":"diacylglycerol pyrophosphate phosphatase activity","type":"exact"}],"termid":"GO:0000810","terms_by_termid":{"GO:0000810":null}}


id: FYPO:0000459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between centromeres of sister chromatids is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"},{"relation_name":"part_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0000337","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic centromeric sister chromatid cohesion","synonyms":[{"name":"abnormal centromeric sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"abnormal centromeric sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"abnormal sister chromatid cohesion at centromere during mitosis","type":"exact"}],"termid":"FYPO:0000459"}


id: PBO:0084992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent medium chain alcohol dehydrogenase; has broad substrate specificity; member of the cinnamyl family of alcohol dehydrogenases; may be involved in fusel alcohol synthesis or in aldehyde tolerance","termid":"PBO:0084992"}


id: PBO:0029469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glucose_binding","termid":"PBO:0029469"}


id: GO:0061311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand the binding to its receptor on the surface of a cell, which contributes to the progression of the heart over time.","definition_xrefs":["GOC:dph","GOC:signaling","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor signaling pathway involved in heart development","synonyms":[{"name":"cell surface receptor linked signaling pathway involved in heart development","type":"exact"},{"name":"cell surface receptor linked signalling pathway involved in heart development","type":"exact"}],"termid":"GO:0061311"}


id: PBO:0029860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_vegetative_cell","termid":"PBO:0029860"}


id: GO:0051899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential decreases with respect to its steady-state potential, usually from negative potential to a more positive potential. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative steady-state resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:dh","Wikipedia:Depolarization"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization","termid":"GO:0051899"}


id: PATO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity inhering in a bearer by virtue of whether the bearer is essential or indispensable.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessity (continuant)","termid":"PATO:0001634"}


id: GO:0004632
data:
  {"annotated_genes":["SJAG_01139"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113148],"is_not":false,"summary":null,"term":"GO:0004632"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + (R)-4'-phosphopantothenate + L-cysteine = CMP + diphosphate + (R)-4'-phosphopantothenoyl-L-cysteine. Cysteine can be replaced by some of its derivatives.","definition_xrefs":["EC:6.3.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01139":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphopantothenate--cysteine ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:19397","MetaCyc:P-PANTOCYSLIG-RXN","Reactome:R-HSA-196753"],"synonyms":[{"name":"(R)-4'-phosphopantothenate:L-cysteine ligase activity","type":"related"},{"name":"phosphopantothenate-cysteine ligase activity","type":"exact"},{"name":"phosphopantothenoylcysteine synthetase activity","type":"exact"}],"termid":"GO:0004632","terms_by_termid":{"GO:0004632":null}}


id: GO:2000970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of detection of glucose.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"detection of glucose","termid":"GO:0051594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of detection of glucose","synonyms":[{"name":"regulation of glucose detection","type":"exact"},{"name":"regulation of glucose perception","type":"related"},{"name":"regulation of glucose sensing","type":"related"}],"termid":"GO:2000970"}


id: SO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A peptide region which hydrogen bonded to another region of peptide running in the oposite direction (both running N-terminal to C-terminal). This orientation is slightly less stable because it introduces nonplanarity in the inter-strand hydrogen bonding pattern. Hydrogen bonding occurs between every other C=O from one strand to every other N-H on the adjacent strand. In this case, if two atoms C-alpha (i)and C-alpha (j) are adjacent in two hydrogen-bonded beta strands, then they do not hydrogen bond to each other; rather, one residue forms hydrogen bonds to the residues that flank the other (but not vice versa). For example, residue i may form hydrogen bonds to residues j - 1 and j + 1; this is known as a wide pair of hydrogen bonds. By contrast, residue j may hydrogen-bond to different residues altogether, or to none at all. The dihedral angles (phi, psi) are about (-120 degrees, 115 degrees) in parallel sheets.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_strand","termid":"SO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"parallel_beta_strand","secondary_identifiers":["BS:00151"],"synonyms":[{"name":"parallel beta strand","type":"exact"}],"termid":"SO:0001113"}


id: PBO:0081344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 146","termid":"PBO:0081344"}


id: PBO:0030751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcriptional_response_to_pheromone_at_normal_pheromone_level_(obsolete_FYPO:0000986)","termid":"PBO:0030751"}


id: PBO:0079511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin reductase 2","termid":"PBO:0079511"}


id: GO:0090719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adaptive immune effector response involving T cells and B lineage cells. In the case of B lineage cells, the effector cells are the antibody secreting plasma cells whereas for T cells the effector cells may be helper T cells or cytotoxic T cells.","definition_xrefs":["ISBN:1405196831","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"adaptive immune effector response","termid":"GO:0090718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune effector response involving T cells and B lineage cells","termid":"GO:0090719"}


id: FYPO:0002465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in a population of spores are viable, and all have an abnormal shape. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable spore population with abnormal spore shape (obsolete FYPO:0002465)","synonyms":[{"name":"inviable population of spores with abnormal shape","type":"exact"},{"name":"inviable spore population with abnormal shape","type":"exact"}],"termid":"FYPO:0002465"}


id: PBO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substrate_is","termid":"PBO:0000015"}


id: GO:1990465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction a long-chain aldehyde + O2 + 2 NADPH = an alkane + formate + H2O + 2 NADP+.","definition_xrefs":["GOC:mengo_curators","PMID:22947199"],"gene_count":0,"genotype_count":0,"name":"obsolete aldehyde oxygenase (deformylating) activity (obsolete GO:1990465)","termid":"GO:1990465"}


id: GO:0106250
data:
  {"annotated_genes":["SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92523],"is_not":false,"summary":null,"term":"GO:0106250"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that represses or decreases the transcription of specific genes sets transcribed by RNA polymerase III.","definition_xrefs":["GOC:txnOH-2018","PMID:31833215","PMID:15590667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0001217"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003674","GO:0003700","GO:0001217","GO:0140110"],"is_obsolete":false,"name":"DNA-binding transcription repressor activity, RNA polymerase III-specific","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106250","terms_by_termid":{"GO:0106250":null}}


id: GO:0033686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of luteinizing hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonadotropin secretion","termid":"GO:0032278"},{"relation_name":"is_a","term_name":"regulation of luteinizing hormone secretion","termid":"GO:0033684"},{"relation_name":"positively_regulates","term_name":"luteinizing hormone secretion","termid":"GO:0032275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of luteinizing hormone secretion","synonyms":[{"name":"activation of luteinizing hormone secretion","type":"narrow"},{"name":"stimulation of luteinizing hormone secretion","type":"narrow"},{"name":"up regulation of luteinizing hormone secretion","type":"exact"},{"name":"up-regulation of luteinizing hormone secretion","type":"exact"},{"name":"upregulation of luteinizing hormone secretion","type":"exact"}],"termid":"GO:0033686"}


id: PBO:0027388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_salt_stress","termid":"PBO:0027388"}


id: PBO:0068564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 15, pseudogene","termid":"PBO:0068564"}


id: PBO:0060984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neugrin, neurite outgrowth associated","termid":"PBO:0060984"}


id: GO:0021897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an astrocyte that resides in the forebrain, from initial commitment of the cell to its fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte development","termid":"GO:0014002"},{"relation_name":"part_of","term_name":"forebrain astrocyte differentiation","termid":"GO:0021896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain astrocyte development","termid":"GO:0021897"}


id: GO:0072655
data:
  {"annotated_genes":["SJAG_02355","SJAG_00569","SJAG_04533","SJAG_00564","SJAG_02398","SJAG_05259","SJAG_03416","SJAG_02397","SJAG_03560","SJAG_03415","SJAG_01949","SJAG_01640","SJAG_04208","SJAG_04336","SJAG_04432","SJAG_03515","SJAG_01615","SJAG_01597","SJAG_02917","SJAG_01684","SJAG_07010","SJAG_02361","SJAG_00404","SJAG_05300","SJAG_01004","SJAG_03648","SJAG_00196","SJAG_01405","SJAG_01560","SJAG_02809","SJAG_01917","SJAG_02797","SJAG_00373","SJAG_03502","SJAG_04996","SJAG_01879","SJAG_05302","SJAG_04218","SJAG_01951","SJAG_01120","SJAG_02524","SJAG_03358","SJAG_00687","SJAG_02077","SJAG_03633","SJAG_01780","SJAG_02034","SJAG_04641","SJAG_04014","SJAG_01442"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84506,94620,105875],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045041"},{"annotations":[99403,101284,85693,87040,95658,103617,103700,90647,111333,112885,107909,105989,113338,84507,103677,95548,98810,102276,95363,93017,96436],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030150"},{"annotations":[103701,109311,99041,112375,103618,95549,103402,84828,88907,103678,86543],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[95129,110800,109460,84966,97032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[110801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051204"},{"annotations":[94364,86523,94709,106158,106508,87050,103679,107903,106518],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045040"},{"annotations":[104184,105303,98328,88430,101688,109304],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[94530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to the mitochondrion or a part of the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mitochondrion","termid":"GO:0070585"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01004":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03633":null,"SJAG_03648":null,"SJAG_04014":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to mitochondrion","type":"exact"},{"name":"establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:0072655","terms_by_termid":{"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0032979":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0051204":null}}


id: FYPO:0001007
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115645],"is_not":false,"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitosis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitosis","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"synonyms":[{"name":"mitosis: normal","type":"exact"},{"name":"normal mitosis during mitotic cell cycle","type":"related"},{"name":"normal mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0001007","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: PBO:0069389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 649, pseudogene","termid":"PBO:0069389"}


id: GO:0004933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the mating-type a-factor pheromone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating-type factor pheromone receptor activity","termid":"GO:0004932"},{"relation_name":"is_a","term_name":"peptide pheromone receptor activity","termid":"GO:0036318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"mating-type a-factor pheromone receptor activity","synonyms":[{"name":"class D G protein coupled receptor activity","type":"broad"},{"name":"class D G-protein coupled receptor activity","type":"broad"},{"name":"class D G-protein-coupled receptor activity","type":"broad"},{"name":"class D GPCR activity","type":"broad"}],"termid":"GO:0004933"}


id: PBO:0044733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 1","termid":"PBO:0044733"}


id: PR:000037296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase cds1 in Schizosaccharomyces pombe that has been phosphorylated on the Thr residue in the second TQ motif by rad3. Example: UniProtKB:Q09170, Thr-11, MOD:00047.","definition_xrefs":["PMID:15173168","PomBase:AL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cds1/Phos:(T11)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein kinase cds1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-CHEK2/Phos:1","type":"exact"},{"name":"cds1/Phos:(T11)","type":"exact"}],"termid":"PR:000037296"}


id: GO:0038046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an enkephalin, and transmitting the signal across the membrane by activating an associated G-protein. A enkephalin is a pentapeptide (Tyr-Gly-Gly-Phe-Met or Tyr-Gly-Gly-Phe-Leu) involved in regulating nociception in the body.","definition_xrefs":["GOC:bf","Wikipedia:Enkephalin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled enkephalin receptor activity","synonyms":[{"name":"delta-opioid receptor activity","type":"related"},{"name":"enkephalin receptor activity","type":"broad"}],"termid":"GO:0038046"}


id: PBO:0080786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 6","termid":"PBO:0080786"}


id: PBO:0003657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK family kinase","termid":"PBO:0003657"}


id: GO:0140896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a double-stranded DNA or RNA from another organism to cytosolic cyclic GMP-AMP (cGAMP) synthase (cGAS) that activates innate immune responses through production of the second messenger cGAMP, which activates the adaptor STING.","definition_xrefs":["PMID:34261127","PMID:34261128","PMID:27648547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cGAS/STING signaling pathway","termid":"GO:0140896"}


id: GO:2000196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of female gonad development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonad development","termid":"GO:1905941"},{"relation_name":"is_a","term_name":"regulation of female gonad development","termid":"GO:2000194"},{"relation_name":"positively_regulates","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female gonad development","synonyms":[{"name":"positive regulation of ovarian development","type":"exact"},{"name":"positive regulation of ovary development","type":"exact"}],"termid":"GO:2000196"}


id: FYPO:0005415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during anaphase of the first meiotic nuclear division is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during meiosis I","termid":"FYPO:0005413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level during meiotic anaphase I","synonyms":[{"name":"increased protein accumulation during meiotic anaphase I","type":"related"},{"name":"increased protein level during first meiotic anaphase","type":"exact"}],"termid":"FYPO:0005415"}


id: GO:2000962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellooligosaccharide metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide metabolic process","termid":"GO:2000960"},{"relation_name":"positively_regulates","term_name":"cellooligosaccharide metabolic process","termid":"GO:2000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellooligosaccharide metabolic process","synonyms":[{"name":"positive regulation of cellooligosaccharide metabolism","type":"exact"}],"termid":"GO:2000962"}


id: PBO:0044597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 5","termid":"PBO:0044597"}


id: MOD:01749
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01749"}


id: GO:0006609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a heterogeneous nuclear ribonucleoprotein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA-binding (hnRNP) protein import into nucleus (obsolete GO:0006609)","synonyms":[{"name":"mRNA-binding (hnRNP) protein import into cell nucleus","type":"exact"},{"name":"mRNA-binding (hnRNP) protein transport from cytoplasm to nucleus","type":"exact"},{"name":"mRNA-binding (hnRNP) protein-nucleus import","type":"exact"}],"termid":"GO:0006609"}


id: PBO:0070547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 13","termid":"PBO:0070547"}


id: PBO:0004953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate lyase superfamily","termid":"PBO:0004953"}


id: FYPO:0008032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic cell cycle spindle assembly checkpoint activation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:36108046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic spindle assembly checkpoint","termid":"FYPO:0003762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000298","FYPO:0000631","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic spindle checkpoint activation","termid":"FYPO:0008032"}


id: GO:0051938
data:
  {"annotated_genes":["SJAG_00522","SJAG_00626","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[99954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901481"},{"annotations":[99955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[92689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate, the L-enantiomer of the anion of 2-aminopentanedioic acid, into a cell or organelle.","definition_xrefs":["GOC:jsg","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-glutamate import","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-glutamate uptake","type":"exact"}],"termid":"GO:0051938","terms_by_termid":{"GO:0015813":null,"GO:0090515":null,"GO:0110141":null,"GO:1901481":null}}


id: PBO:0059939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 25","termid":"PBO:0059939"}


id: PBO:0074637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 30B","termid":"PBO:0074637"}


id: PBO:0071925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 2","termid":"PBO:0071925"}


id: GO:0046373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-arabinose, the D-enantiomer of arabino-pentose. L-arabinose occurs free, e.g. in the heartwood of many conifers, and in the combined state, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides etc.","definition_xrefs":["ISBN:0198506732","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose metabolic process","termid":"GO:0019566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"L-arabinose metabolic process","synonyms":[{"name":"L-arabinose metabolism","type":"exact"}],"termid":"GO:0046373"}


id: GO:0120241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the hydrolytic deamination of imine intermediates formed by several types of pyridoxal-5'-phosphate-dependent dehydratases, such as EC 4.3.1.19 and EC 4.3.1.17.","definition_xrefs":["EC:3.5.99.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"2-iminobutanoate/2-iminopropanoate deaminase","synonyms":[{"name":"2-iminobutanoate deaminase","type":"narrow"},{"name":"2-iminopropanoate deaminase","type":"narrow"},{"name":"enamine/imine deaminase","type":"broad"},{"name":"imine intermediate deaminase activity","type":"related"}],"termid":"GO:0120241"}


id: GO:0048030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a disaccharide. Disaccharides are sugars composed of two monosaccharide units.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"disaccharide binding","termid":"GO:0048030"}


id: PBO:0050108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 18","termid":"PBO:0050108"}


id: FYPO:0003372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during one or both meiotic nuclear divisions. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during meiotic cell cycle","termid":"FYPO:0006975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"RNA absent from cell during meiosis","synonyms":[{"name":"RNA absent from cell during meiotic nuclear division","type":"exact"},{"name":"transcripts absent from cell during meiosis","type":"exact"},{"name":"undetectable cellular RNA level during meiosis","type":"exact"}],"termid":"FYPO:0003372"}


id: PBO:0086542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR022C is not an essential gene","termid":"PBO:0086542"}


id: GO:0097445
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Electron dense projection extending from the cytomatrix into the cytoplasm on which synaptic vesicles are tethered.","definition_xrefs":["NIF_Subcellular:sao494258938","PMID:15381754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic active zone dense projection","synonyms":[{"name":"active zone dense projection","type":"exact"},{"name":"pre-synaptic active zone dense projection","type":"exact"}],"termid":"GO:0097445"}


id: FYPO:0003971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of that undergoes two or more rounds of cell division in which cells do not completely separate upon cytokinesis, form septa that are thicker than normal, and then die.","definition_xrefs":["PomBase:vw","PMID:9046095","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased septum thickness","termid":"FYPO:0001406"},{"relation_name":"has_part","term_name":"abnormal cell separation after cytokinesis resulting in septated cell","termid":"FYPO:0001972"},{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"},{"relation_name":"is_a","term_name":"increased septum thickness","termid":"FYPO:0001406"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, with abnormal septation","termid":"FYPO:0006878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, with abnormal cytokinetic cell separation and increased septum thickness","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, with abnormal cytokinetic cell separation and thick septa","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, with abnormal cytokinetic cell separation and increased septum thickness","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, with abnormal cytokinetic cell separation and increased septum thickness","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, with abnormal cytokinetic cell separation and increased septum thickness","type":"exact"}],"termid":"FYPO:0003971"}


id: PBO:0047375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 6","termid":"PBO:0047375"}


id: GO:1902633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","GOC:di","PMID:22562153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:1902633"}


id: GO:0072715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a selenite ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to selenite ion","termid":"GO:0072714"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to selenite ion","termid":"GO:0072715"}


id: PBO:0056645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 6","termid":"PBO:0056645"}


id: GO:0043377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of CD8-positive, alpha-beta T cell differentiation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043376"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell differentiation","termid":"GO:0046639"},{"relation_name":"is_a","term_name":"negative regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001186"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta T cell differentiation","synonyms":[{"name":"down regulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"down-regulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"downregulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"inhibition of CD8-positive, alpha-beta T cell differentiation","type":"narrow"},{"name":"negative regulation of CD8-positive T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive T-cell differentiation","type":"exact"},{"name":"negative regulation of CD8-positive T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha-beta T cell development","type":"related"}],"termid":"GO:0043377"}


id: PBO:0079151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN11 antisense RNA 1","termid":"PBO:0079151"}


id: PR:Q1MTQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle control protein 50B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02403","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 89 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.11c","secondary_identifiers":["UniProtKB:Q1MTQ5"],"synonyms":[{"name":"Spom972h-TMEM30B","type":"exact"}],"termid":"PR:Q1MTQ5"}


id: PR:Q09828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.09","secondary_identifiers":["UniProtKB:Q09828"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS2","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09828"}


id: GO:0052225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near a second organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis on or near other organism involved in symbiotic interaction (obsolete GO:0052225)","synonyms":[{"name":"energy taxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052225"}


id: PBO:0051501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Indian hedgehog signaling molecule","termid":"PBO:0051501"}


id: PBO:0061453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 5 group A member 1","termid":"PBO:0061453"}


id: GO:2000904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of starch metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"starch metabolic process","termid":"GO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of starch metabolic process","synonyms":[{"name":"regulation of starch metabolism","type":"exact"}],"termid":"GO:2000904"}


id: PBO:0087311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small rho-like GTPase; essential for establishment and maintenance of cell polarity; plays a role late in cell fusion via activation of key cell fusion regulator Fus2p; acts with ESCRT proteins at sites of nuclear envelope and ER fission; mutants have defects in the organization of actin and septins; human homolog CDC42 can complement yeast cdc42 mutant","termid":"PBO:0087311"}


id: PBO:0055888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC8D divergent transcript","termid":"PBO:0055888"}


id: PR:Q9P3B1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1565.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3B1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho GTPase-activating protein C1565.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.02c","synonyms":[{"name":"Spom972h-SPAC1565.02c","type":"exact"}],"termid":"PR:Q9P3B1"}


id: PBO:0113096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol kinase; localized to the endoplasmic reticulum (ER); overproduction induces enlargement of ER-like membrane structures, stimulates the mevalonate/ergosterol pathway and suppresses a temperature-sensitive sly1 mutation; contains a CTP transferase domain","termid":"PBO:0113096"}


id: PBO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet dependent proline dimethyltransferase involved in translation Tea1 (predicted)","termid":"PBO:0002096"}


id: PBO:0030832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_during_iron_starvation","termid":"PBO:0030832"}


id: PBO:0005883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine, mitochondrial","termid":"PBO:0005883"}


id: GO:0032886
data:
  {"annotated_genes":["SJAG_03073","SJAG_03048","SJAG_04597","SJAG_00845","SJAG_00244","SJAG_00082","SJAG_00514","SJAG_04312","SJAG_01821","SJAG_04464","SJAG_02045","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902845"},{"annotations":[97555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062168"},{"annotations":[97967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[90543,86155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[107541],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[90544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[99825,111418,111153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070507"},{"annotations":[87520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031110"},{"annotations":[107123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[107124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032888"},{"annotations":[111154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[86029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"microtubule-based process","termid":"GO:0007017"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01821":null,"SJAG_02045":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_04312":null,"SJAG_04464":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microtubule-based process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032886","terms_by_termid":{"GO:0031110":null,"GO:0031117":null,"GO:0032888":null,"GO:0060236":null,"GO:0062168":null,"GO:0070507":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null,"GO:1902845":null,"GO:1902846":null,"GO:1902854":null}}


id: PBO:0074399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 8","termid":"PBO:0074399"}


id: PBO:0049538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 2, pseudogene","termid":"PBO:0049538"}


id: FYPO:0005311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"normal histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K4me during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K4 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005311"}


id: GO:0150157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-34 production.","definition_xrefs":["GOC:aruk","PMID:26754294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-34 production","termid":"GO:0150155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-34 production","secondary_identifiers":["GO:0150156","GO:0150160"],"synonyms":[{"name":"interleukin-34 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-34 biosynthetic process","type":"narrow"}],"termid":"GO:0150157"}


id: PR:O42980
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-specific protease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.01","synonyms":[{"name":"Spom972h-nep1","type":"exact"}],"termid":"PR:O42980"}


id: FYPO:0005353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the RTS1 barrier is normal (i.e. indistinguishable from wild type). Note that the RTS1 barrier usually occurs in the mating type locus, but might be assayed at ectopic loci to maximise the distance that a restarted fork travels.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal replication fork arrest","termid":"FYPO:0008191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal replication fork arrest at RTS1 barrier","synonyms":[{"name":"normal replication fork arrest at mating-type locus","type":"related"},{"name":"normal replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"normal replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005353"}


id: PBO:0049397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTSE1 divergent transcript","termid":"PBO:0049397"}


id: PBO:0090526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa4","termid":"PBO:0090526"}


id: PBO:0043621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 10","termid":"PBO:0043621"}


id: PBO:0066324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RC3H1 divergent transcript","termid":"PBO:0066324"}


id: SO:0001135
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type II: A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles: Residue(i+1): -140 degrees > phi > -20 degrees, +80 degrees > psi > +180 degrees. Residue(i+2): +20 degrees > phi > +140 degrees, -40 degrees > psi > +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_left_handed_type_two","secondary_identifiers":["BS:00213"],"synonyms":[{"name":"beta turn left handed type two","type":"exact"},{"name":"beta_turn_iil","type":"exact"},{"name":"type II' beta turn","type":"exact"},{"name":"type II' turn","type":"exact"}],"termid":"SO:0001135"}


id: GO:0070715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-dependent, movement of organic cations into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"sodium-dependent organic cation transport","termid":"GO:0070715"}


id: PBO:0079480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin beta","termid":"PBO:0079480"}


id: GO:0141061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of a cell of another organism, leading to damage or temporary subversion of that cell.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of cell in another organism","termid":"GO:0141061"}


id: PBO:0090086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ubiquitin-protein ligase E3 Pex12","termid":"PBO:0090086"}


id: GO:1900125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hyaluronan biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide biosynthetic process","termid":"GO:0032885"},{"relation_name":"regulates","term_name":"hyaluronan biosynthetic process","termid":"GO:0030213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of hyaluronan biosynthetic process","synonyms":[{"name":"regulation of hyaluronan anabolism","type":"exact"},{"name":"regulation of hyaluronan biosynthesis","type":"exact"},{"name":"regulation of hyaluronan formation","type":"exact"},{"name":"regulation of hyaluronan synthesis","type":"exact"}],"termid":"GO:1900125"}


id: PBO:0073564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src homology 2 domain containing transforming protein D","termid":"PBO:0073564"}


id: PATO:0002454
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A  quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a carpel.","definition_xrefs":["PATO:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carpel-like","termid":"PATO:0002454"}


id: PBO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains CRE element","termid":"PBO:0001037"}


id: GO:0061326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the renal tubule over time from its formation to the mature form. A renal tubule is a tube that filters, re-absorbs and secretes substances to rid an organism of waste and to play a role in fluid homeostasis.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal tubule development","termid":"GO:0061326"}


id: PATO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A frequency which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"},{"relation_name":"is_a","term_name":"increased rate","termid":"PATO:0000912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency","synonyms":[{"name":"frequent","type":"related"},{"name":"high frequency","type":"exact"}],"termid":"PATO:0000380"}


id: GO:0071193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv channel interacting protein KChIP2 associated with the channel via interaction with the Kv alpha subunit 4.2.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Kv4.2-KChIP2 channel complex","secondary_identifiers":["CORUM:607"],"termid":"GO:0071193"}


id: PBO:0044554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual adaptor of phosphotyrosine and 3-phosphoinositides 1","termid":"PBO:0044554"}


id: GO:0033257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing one Bcl protein and one or more copies of NF-kappaB2; formation of complexes of different stoichiometry depends on the Bcl3:NF-kappaB2 ratio, and allow Bcl3 to exert different regulatory effects on NF-kappaB2-dependent transcription.","definition_xrefs":["GOC:mah","PMID:9407099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"I-kappaB/NF-kappaB complex","termid":"GO:0033256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Bcl3/NF-kappaB2 complex","synonyms":[{"name":"Bcl3-NFKB2 complex","type":"related"},{"name":"Bcl3-p52 complex","type":"exact"}],"termid":"GO:0033257"}


id: PBO:0029466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_fructose_binding","termid":"PBO:0029466"}


id: GO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle. An example of this process is found in Mus musculus.","definition_xrefs":["PMID:16638982","MA:0001271","GOC:dph","GOC:mtg_sensu","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle tissue development","termid":"GO:0007519"},{"relation_name":"is_a","term_name":"skeletal muscle organ development","termid":"GO:0060538"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extraocular skeletal muscle development","termid":"GO:0002074"}


id: PBO:0016990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (ubiquinone) Nde1 (predicted)","termid":"PBO:0016990"}


id: PBO:0074636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 30","termid":"PBO:0074636"}


id: PBO:0081825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF747 divergent transcript","termid":"PBO:0081825"}


id: GO:0010616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle adaptation","termid":"GO:0010612"},{"relation_name":"is_a","term_name":"negative regulation of muscle adaptation","termid":"GO:0014745"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle adaptation","termid":"GO:0014887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle adaptation","termid":"GO:0010616"}


id: GO:0102516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside + 1-O-feruloyl-beta-D-glucose = delphinidin 3,7-di O-beta-D-glucoside + ferulate + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"delphinidin 3-O-glucoside 7-O-glucosyltransferase (feruloyl-glucose dependent) activity","secondary_identifiers":["MetaCyc:RXN-14448"],"termid":"GO:0102516"}


id: GO:0007340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The discharge, by sperm, of a single, anterior secretory granule following the sperm's attachment to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents into the zona pellucida.","definition_xrefs":["PMID:21042299","GOC:dph","PMID:3886029","PMID:11175768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acrosome reaction","secondary_identifiers":["Wikipedia:Acrosome_reaction"],"termid":"GO:0007340"}


id: PBO:0043645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 5 pseudogene 2","termid":"PBO:0043645"}


id: GO:0042584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a chromaffin granule, a specialized secretory vesicle found in the cells of adrenal glands and various other organs, which is concerned with the synthesis, storage, metabolism, and secretion of epinephrine and norepinephrine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"chromaffin granule","termid":"GO:0042583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromaffin granule membrane","termid":"GO:0042584"}


id: PBO:0034076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_non_functional_homology_relationship_with","termid":"PBO:0034076"}


id: GO:1900387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cell-cell adhesion.","definition_xrefs":["GOC:BHF","PMID:15737616","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900387)","termid":"GO:1900387"}


id: PBO:0058525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6070","termid":"PBO:0058525"}


id: PATO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001033 stiffness (obsolete PATO:0001033)","termid":"PATO:0001033"}


id: GO:0097274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of urea.","definition_xrefs":["GOC:yaf","PMID:12695560"],"gene_count":0,"genotype_count":0,"name":"obsolete urea homeostasis (obsolete GO:0097274)","termid":"GO:0097274"}


id: PBO:0011509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome BAR domain protein Pil1","termid":"PBO:0011509"}


id: GO:0009539
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integral membrane complex containing P680, the chlorophyll a molecule that functions as a primary electron donor. In the light, functioning as a water-plastoquinone oxidoreductase, it transfers electrons from water to plastoquinone.","definition_xrefs":["GOC:kd","ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"photosystem II","termid":"GO:0009523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"photosystem II reaction center","synonyms":[{"name":"photosystem II reaction centre","type":"exact"}],"termid":"GO:0009539"}


id: PR:O94698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 74 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein nsa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.15","secondary_identifiers":["UniProtKB:O94698"],"synonyms":[{"name":"Spom972h-WDR74","type":"exact"}],"termid":"PR:O94698"}


id: GO:0004956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostaglandin D receptor activity","synonyms":[{"name":"PGD receptor activity","type":"related"},{"name":"PGD(2) receptor activity","type":"exact"}],"termid":"GO:0004956"}


id: GO:0031894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a V1A vasopressin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin receptor binding","termid":"GO:0031893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"V1A vasopressin receptor binding","synonyms":[{"name":"V1A vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031894"}


id: GO:0040031
data:
  {"annotated_genes":["SJAG_01958","SJAG_01234","SJAG_04754","SJAG_00088","SJAG_00566","SJAG_00083","SJAG_03572"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120049"},{"annotations":[102329,102388,91485,110402,97279,86167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within snRNA, resulting in a change in the properties of the snRNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00088":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_01958":null,"SJAG_03572":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"snRNA modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0040031","terms_by_termid":{"GO:0031120":null,"GO:0120049":null}}


id: PR:O14097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain-containing protein C2F3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.14c","synonyms":[{"name":"Spom972h-saf2","type":"exact"}],"termid":"PR:O14097"}


id: PBO:0064866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26","termid":"PBO:0064866"}


id: PBO:0073329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 5","termid":"PBO:0073329"}


id: GO:0034809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene-cis-4,5-dihydrodiol = 4,5-dihydroxybenzo(a)pyrene + H2.","definition_xrefs":["UM-BBD_reactionID:r1127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"benzo(a)pyrene-cis-4,5-dihydrodiol dehydrogenase activity","termid":"GO:0034809"}


id: PBO:0050174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 30","termid":"PBO:0050174"}


id: PBO:0049794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietic cell-specific Lyn substrate 1","termid":"PBO:0049794"}


id: PBO:0065048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 2","termid":"PBO:0065048"}


id: PBO:0053303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-28 homolog A","termid":"PBO:0053303"}


id: PBO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dopey family protein (predicted)","termid":"PBO:0000402"}


id: PBO:0078436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-6","termid":"PBO:0078436"}


id: GO:0006562
data:
  {"annotated_genes":["SJAG_02309","SJAG_02235","SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88882],"is_not":false,"summary":null,"term":"GO:0006562"},{"annotations":[114084,103225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline metabolic process","termid":"GO:0006560"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null,"SJAG_02309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"proline catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"proline breakdown","type":"exact"},{"name":"proline catabolism","type":"exact"},{"name":"proline degradation","type":"exact"}],"termid":"GO:0006562","terms_by_termid":{"GO:0006562":null,"GO:0010133":null}}


id: PBO:0046175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK2B, pseudogene","termid":"PBO:0046175"}


id: GO:1904643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a curcumin stimulus.","definition_xrefs":["GO_REF:0000071","PMID:24755072","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to curcumin","termid":"GO:1904643"}


id: PBO:0078772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-4","termid":"PBO:0078772"}


id: GO:1905418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GOC:cilia","GOC:TermGenie","GO_REF:0000058","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amoeboid sperm motility","termid":"GO:1905416"},{"relation_name":"is_a","term_name":"positive regulation of cell motility","termid":"GO:2000147"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amoeboid sperm motility","synonyms":[{"name":"activation of ameboid sperm motility","type":"narrow"},{"name":"activation of ameboid sperm movement","type":"narrow"},{"name":"activation of amoeboid sperm motility","type":"narrow"},{"name":"activation of amoeboid sperm movement","type":"narrow"},{"name":"positive regulation of ameboid sperm motility","type":"exact"},{"name":"positive regulation of ameboid sperm movement","type":"exact"},{"name":"positive regulation of amoeboid sperm movement","type":"exact"},{"name":"up regulation of ameboid sperm motility","type":"exact"},{"name":"up regulation of ameboid sperm movement","type":"exact"},{"name":"up regulation of amoeboid sperm motility","type":"exact"},{"name":"up regulation of amoeboid sperm movement","type":"exact"},{"name":"up-regulation of ameboid sperm motility","type":"exact"},{"name":"up-regulation of ameboid sperm movement","type":"exact"},{"name":"up-regulation of amoeboid sperm motility","type":"exact"},{"name":"up-regulation of amoeboid sperm movement","type":"exact"},{"name":"upregulation of ameboid sperm motility","type":"exact"},{"name":"upregulation of ameboid sperm movement","type":"exact"},{"name":"upregulation of amoeboid sperm motility","type":"exact"},{"name":"upregulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905418"}


id: PBO:0069933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1226, pseudogene","termid":"PBO:0069933"}


id: PBO:0050051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, P (pseudogene)","termid":"PBO:0050051"}


id: PBO:0073132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 4","termid":"PBO:0073132"}


id: GO:0031221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arabinan, a polysaccharide composed of arabinose residues.","definition_xrefs":["ISBN:0198506732","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"arabinan metabolic process","synonyms":[{"name":"arabinan metabolism","type":"exact"}],"termid":"GO:0031221"}


id: PR:Q9C0U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps5 gene.","definition_xrefs":["UniProtKB:Q9C0U7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein vps5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPJ732.01","synonyms":[{"name":"Spom972h-vps5","type":"exact"}],"termid":"PR:Q9C0U7"}


id: PBO:0053202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 1","termid":"PBO:0053202"}


id: PBO:0055403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2833","termid":"PBO:0055403"}


id: GO:0052170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of the innate immune response of the host organism, the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host innate immune response","secondary_identifiers":["GO:0052309"],"synonyms":[{"name":"down regulation by symbiont of host innate immunity","type":"exact"},{"name":"down-regulation by symbiont of host innate immunity","type":"exact"},{"name":"downregulation by symbiont of host innate immunity","type":"exact"},{"name":"inhibition by symbiont of host innate immunity","type":"narrow"},{"name":"negative regulation by symbiont of host innate immune response","type":"exact"},{"name":"negative regulation by symbiont of host innate immunity","type":"exact"},{"name":"negative regulation of host innate immune response","type":"exact"},{"name":"negative regulation of innate immune response in other organism","type":"broad"},{"name":"suppression by symbiont of host innate immune response","type":"exact"},{"name":"suppression of host innate immune response","type":"exact"}],"termid":"GO:0052170"}


id: GO:0015307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + drug(in) = H+(in) + drug(out).","definition_xrefs":["TC:2.A.1.2.-","TC:2.A.1.3.-"],"gene_count":0,"genotype_count":0,"name":"obsolete drug:proton antiporter activity (obsolete GO:0015307)","synonyms":[{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity","type":"narrow"},{"name":"drug:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015307"}


id: PBO:0048984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPATCH11 pseudogene 1","termid":"PBO:0048984"}


id: PBO:0072907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory carrier membrane protein 5","termid":"PBO:0072907"}


id: PR:O59741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C530.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.05","synonyms":[{"name":"Spom972h-prt1","type":"exact"}],"termid":"PR:O59741"}


id: PBO:0000599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD protein-1 Cph1","termid":"PBO:0000599"}


id: PBO:0030814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_isocitrate_dehydrogenase_(NAD+)_activity","termid":"PBO:0030814"}


id: GO:1901135
data:
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id: PR:O13823
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id: PBO:0108984
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id: PBO:0086510
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id: PBO:0055126
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id: FYPO:0004135
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id: FYPO:0008231
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id: GO:0097186
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id: GO:0008138
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id: FYPO:0006394
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id: GO:1904331
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id: GO:1903933
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id: GO:0047791
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id: PATO:0000549
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id: PBO:0053070
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id: PBO:0063305
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id: PBO:0055363
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2792","termid":"PBO:0055363"}


id: PBO:0048344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 55","termid":"PBO:0048344"}


id: PBO:0080169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 4","termid":"PBO:0080169"}


id: PBO:0050052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, S (pseudogene)","termid":"PBO:0050052"}


id: GO:0071469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus with pH > 7. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["Wikipedia:PH","GOC:go_curators","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaline pH","termid":"GO:0010446"},{"relation_name":"is_a","term_name":"cellular response to pH","termid":"GO:0071467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to alkaline pH","synonyms":[{"name":"cellular response to alkalinity","type":"broad"},{"name":"cellular response to basic pH","type":"exact"}],"termid":"GO:0071469"}


id: PBO:0113088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein required for sporulation; targeted to vacuole via AP-3 pathway","termid":"PBO:0113088"}


id: PBO:0063208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 pseudogene 4","termid":"PBO:0063208"}


id: PBO:0113097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrosphingosine phosphate lyase; regulates intracellular levels of sphingolipid long-chain base phosphates (LCBPs), degrades phosphorylated long chain bases, prefers C16 dihydrosphingosine-l-phosphate as a substrate; localizes to the ER and to the peroxisome","termid":"PBO:0113097"}


id: PBO:0073997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 4","termid":"PBO:0073997"}


id: PBO:0044039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 11","termid":"PBO:0044039"}


id: PBO:0061062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKAIN1 pseudogene 2","termid":"PBO:0061062"}


id: PBO:0055038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2453","termid":"PBO:0055038"}


id: PBO:0060250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL antisense RNA 1","termid":"PBO:0060250"}


id: PBO:0026937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromosome","termid":"PBO:0026937"}


id: GO:0015106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3-.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"bicarbonate transmembrane transporter activity","secondary_identifiers":["RHEA:28695","Reactome:R-HSA-2752067"],"synonyms":[{"name":"hydrogencarbonate transmembrane transporter activity","type":"exact"}],"termid":"GO:0015106"}


id: GO:0018105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine.","definition_xrefs":["RESID:AA0037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine phosphorylation","termid":"GO:0018105"}


id: PBO:0042554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 17","termid":"PBO:0042554"}


id: PBO:0031034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_organization","termid":"PBO:0031034"}


id: PR:O74497
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC285.10c gene.","definition_xrefs":["UniProtKB:O74497","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain-containing protein C285.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.10c","synonyms":[{"name":"Spom972h-SPCC285.10c","type":"exact"}],"termid":"PR:O74497"}


id: PBO:0041226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 35","termid":"PBO:0041226"}


id: GO:0043726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-6-(5-phospho-D-ribitylamino)uracil + H2O = 5-amino-6-(D-ribitylamino)uracil + phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"5-amino-6-(5-phosphoribitylamino)uracil phosphatase activity","secondary_identifiers":["MetaCyc:RIBOPHOSPHAT-RXN","RHEA:25197","GO:0019173","EC:3.1.3.104"],"synonyms":[{"name":"pyrimidine phosphatase activity","type":"exact"}],"termid":"GO:0043726"}


id: PBO:0063451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 9A","termid":"PBO:0063451"}


id: GO:0045251
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex facilitating the electron transfer from an acyl-CoA molecule to ubiquinone via its flavin adenine dinucleotide (FAD) cofactor. Usually contains an alpha and a beta subunit and the structural cofactor adenosine monophosphate (AMP). Part of a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the electron transport system.","definition_xrefs":["ISBN:0198506732","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"electron transfer flavoprotein complex","synonyms":[{"name":"ETF complex","type":"exact"}],"termid":"GO:0045251"}


id: MOD:01249
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of iodouridine monophosphate with an L-tryptophan residue.","definition_xrefs":["PubMed:11567090","PubMed:6540775","PubMed:11112526","Unimod:292#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodouridine monophosphate derivatized residue","termid":"MOD:00611"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodouridine monophosphate derivatized tryptophan","synonyms":[{"name":"Cross-link of (Iodo)-uracil MP with W,F,Y","type":"related"},{"name":"IodoU-AMP","type":"related"}],"termid":"MOD:01249"}


id: PBO:0089941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S15","termid":"PBO:0089941"}


id: BFO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"realized_in","termid":"BFO:0000054"}


id: PBO:0059182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoregulin","termid":"PBO:0059182"}


id: PBO:0081202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 3","termid":"PBO:0081202"}


id: PBO:0044469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 7 subfamily B member 1","termid":"PBO:0044469"}


id: PBO:0075731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 14","termid":"PBO:0075731"}


id: PBO:0001233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk1 (predicted)","termid":"PBO:0001233"}


id: GO:0005816
data:
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functionally homologous to the animal cell centrosome.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":157,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00104":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00142":null,"SJAG_00229":null,"SJAG_00317":null,"SJAG_00333":null,"SJAG_00356":null,"SJAG_00405":null,"SJAG_00430":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00719":null,"SJAG_00724":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00800":null,"SJAG_00807":null,"SJAG_00856":null,"SJAG_00907":null,"SJAG_00910":null,"SJAG_00918":null,"SJAG_00982":null,"SJAG_01050":null,"SJAG_01082":null,"SJAG_01146":null,"SJAG_01188":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01232":null,"SJAG_01242":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01386":null,"SJAG_01401":null,"SJAG_01422":null,"SJAG_01464":null,"SJAG_01483":null,"SJAG_01538":null,"SJAG_01546":null,"SJAG_01563":null,"SJAG_01620":null,"SJAG_01662":null,"SJAG_01745":null,"SJAG_01756":null,"SJAG_01760":null,"SJAG_01775":null,"SJAG_01777":null,"SJAG_01785":null,"SJAG_01790":null,"SJAG_01799":null,"SJAG_01805":null,"SJAG_02045":null,"SJAG_02058":null,"SJAG_02098":null,"SJAG_02104":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02232":null,"SJAG_02246":null,"SJAG_02248":null,"SJAG_02266":null,"SJAG_02286":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02368":null,"SJAG_02444":null,"SJAG_02514":null,"SJAG_02529":null,"SJAG_02542":null,"SJAG_02550":null,"SJAG_02556":null,"SJAG_02561":null,"SJAG_02609":null,"SJAG_02616":null,"SJAG_02624":null,"SJAG_02724":null,"SJAG_02736":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02795":null,"SJAG_02886":null,"SJAG_02921":null,"SJAG_02923":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03052":null,"SJAG_03062":null,"SJAG_03092":null,"SJAG_03116":null,"SJAG_03200":null,"SJAG_03216":null,"SJAG_03259":null,"SJAG_03264":null,"SJAG_03287":null,"SJAG_03342":null,"SJAG_03351":null,"SJAG_03376":null,"SJAG_03491":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03540":null,"SJAG_03544":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03612":null,"SJAG_03615":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03708":null,"SJAG_03810":null,"SJAG_03835":null,"SJAG_03843":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03936":null,"SJAG_04010":null,"SJAG_04140":null,"SJAG_04143":null,"SJAG_04239":null,"SJAG_04280":null,"SJAG_04455":null,"SJAG_04457":null,"SJAG_04461":null,"SJAG_04468":null,"SJAG_04498":null,"SJAG_04551":null,"SJAG_04558":null,"SJAG_04595":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04653":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_04901":null,"SJAG_04931":null,"SJAG_04943":null,"SJAG_04980":null,"SJAG_05185":null,"SJAG_05196":null,"SJAG_05205":null,"SJAG_05207":null,"SJAG_05260":null,"SJAG_05264":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05309":null,"SJAG_05315":null,"SJAG_05978":null,"SJAG_06270":null,"SJAG_07018":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"spindle pole body","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21733045":null,"PMID:32109380":null,"PMID:32243490":null},"secondary_identifiers":["Wikipedia:Spindle_pole_body"],"synonyms":[{"name":"SPB","type":"exact"}],"termid":"GO:0005816","terms_by_termid":{"GO:0000093":null,"GO:0005816":null,"GO:0035974":null,"GO:0044732":null,"GO:0061493":null,"GO:0061496":null,"GO:0061497":null,"GO:0061499":null,"GO:0071957":null,"GO:0071958":null,"GO:1990334":null}}


id: PBO:0043998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic somatomammotropin hormone like 1","termid":"PBO:0043998"}


id: GO:0060612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adipose tissue development","synonyms":[{"name":"adipogenesis","type":"related"}],"termid":"GO:0060612"}


id: PR:Q9UT07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PRELI domain-containing protein 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02214","PANTHER:PTHR11158:SF16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ups1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.10","secondary_identifiers":["UniProtKB:Q9UT07"],"synonyms":[{"name":"Spom972h-PRELID1","type":"exact"}],"termid":"PR:Q9UT07"}


id: PBO:0050068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLX antisense RNA 1","termid":"PBO:0050068"}


id: PBO:0087307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small (67 amino acids) protein involved in sporulation; localizes to the prospore membrane; phosphorylated during meiosis; a longer, 5'-extended mRNA is also transcribed beginning in mid-meiosis, regulated by two MSEs (middle sporulation elements), and includes an uORF of 15 codons in its 5'-UTR; evidence transcription is regulated by Pdr1p","termid":"PBO:0087307"}


id: GO:0035578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an azurophil granule, a primary lysosomal granule found in neutrophil granulocytes that contains a wide range of hydrolytic enzymes and is released into the extracellular fluid.","definition_xrefs":["GOC:bf","PMID:17152095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"azurophil granule","termid":"GO:0042582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"azurophil granule lumen","synonyms":[{"name":"primary granule lumen","type":"exact"}],"termid":"GO:0035578"}


id: PBO:0076203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 13","termid":"PBO:0076203"}


id: PBO:0080573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing planar cell polarity effector","termid":"PBO:0080573"}


id: PBO:0002787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease Ure2","termid":"PBO:0002787"}


id: GO:0008257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + protein L-histidine = ADP + protein N(tau)-phospho-L-histidine.","definition_xrefs":["EC:2.7.13.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0016301","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"protein histidine tele-kinase activity","secondary_identifiers":["MetaCyc:2.7.13.2-RXN","RHEA:11860"],"synonyms":[{"name":"ATP:protein-L-histidine N-tele-phosphotransferase activity","type":"related"},{"name":"ATP:protein-L-histidine Ntau-phosphotransferase activity","type":"related"},{"name":"protein-histidine tele-kinase activity","type":"exact"}],"termid":"GO:0008257"}


id: GO:0009243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the O side chain of a lipopolysaccharide, which determines the antigenic specificity of the organism. It is made up of about 50 repeating units of a branched tetrasaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"O antigen metabolic process","termid":"GO:0046402"},{"relation_name":"part_of","term_name":"lipopolysaccharide biosynthetic process","termid":"GO:0009103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006629"],"is_obsolete":false,"name":"O antigen biosynthetic process","synonyms":[{"name":"O antigen anabolism","type":"exact"},{"name":"O antigen biosynthesis","type":"exact"},{"name":"O antigen formation","type":"exact"},{"name":"O antigen synthesis","type":"exact"}],"termid":"GO:0009243"}


id: PBO:0113365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with structural similarity to lipid transport protein Vps13p; localizes to multiple membrane contact sites between organelles including mitochondria–ER contact sites; non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0113365"}


id: PBO:0041050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 1","termid":"PBO:0041050"}


id: PBO:0058074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4292","termid":"PBO:0058074"}


id: GO:0039646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the normal execution of the host cell G0/G1 transition checkpoint. The host is defined as the larger of the organisms involved in a symbiotic interaction. Some viruses benefit from keeping cells in resting state (G0), while others favor entry through G1 and subsequent cell division to replicate more efficiently.","definition_xrefs":["VZ:880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cell cycle progression","termid":"GO:0044071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell cycle G0/G1 transition checkpoint","secondary_identifiers":["VZ:881"],"synonyms":[{"name":"G0/G1 host cell cycle checkpoint dysregulation by virus","type":"narrow"},{"name":"modulation by virus of host G0/G1 transition checkpoint","type":"narrow"},{"name":"perturbation by virus of host G0/G1 transition checkpoint","type":"narrow"}],"termid":"GO:0039646"}


id: PBO:0018011
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the aconitase+bL21 domain localize to mitochondria and the nucleus, the sole aconitase domain localizes to mitochondria","termid":"PBO:0018011"}


id: GO:0008010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of a larva. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of chitin-based cuticle","termid":"GO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of chitin-based larval cuticle","synonyms":[{"name":"structural constituent of larval cuticle","type":"broad"}],"termid":"GO:0008010"}


id: GO:0070601
data:
  {"annotated_genes":["SJAG_03926","SJAG_01805","SJAG_00600","SJAG_01601","SJAG_04126","SJAG_04699","SJAG_03989","SJAG_03681","SJAG_00229","SJAG_01082","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89925,109342,110603,112005,95248,109897,97389,103932,100606,97913],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[69472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051754"},{"annotations":[95250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071962"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the length of the centromeric region of the chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"centromeric sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sister chromatid cohesion at centromere","type":"exact"}],"termid":"GO:0070601","terms_by_termid":{"GO:0051754":null,"GO:0071962":null,"GO:1990813":null}}


id: GO:0071035
data:
  {"annotated_genes":["SJAG_03745","SJAG_01191","SJAG_01176","SJAG_01818","SJAG_04084","SJAG_04006","SJAG_04824","SJAG_00854","SJAG_04818","SJAG_01521","SJAG_04321","SJAG_03179","SJAG_04153","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84548,88371,89192,92047,93384,98200,100512,101358,102566,103563,109377,111543,111990,114372],"is_not":false,"summary":null,"term":"GO:0071035"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a ribosomal RNA (rRNA) molecule, including RNA fragments released as part of processing the primary transcript into multiple mature rRNA species, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA.","definition_xrefs":["PMID:15572680","GOC:krc","PMID:17652137","PMID:18591258","PMID:15173578","PMID:15935758","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent rRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent rRNA catabolic process","type":"related"}],"termid":"GO:0071035","terms_by_termid":{"GO:0071035":null}}


id: PBO:0075405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 3","termid":"PBO:0075405"}


id: GO:0050373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-L-arabinose = UDP-alpha-D-xylose.","definition_xrefs":["EC:5.1.3.5","RHEA:11320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"UDP-arabinose 4-epimerase activity","secondary_identifiers":["MetaCyc:UDP-ARABINOSE-4-EPIMERASE-RXN","KEGG_REACTION:R01473"],"synonyms":[{"name":"UDP arabinose epimerase activity","type":"related"},{"name":"UDP-D-xylose 4-epimerase activity","type":"related"},{"name":"UDP-D-xylose-4-epimerase activity","type":"exact"},{"name":"UDP-L-arabinose 4-epimerase activity","type":"related"},{"name":"UDParabinose 4-epimerase activity","type":"related"},{"name":"uridine 5'-diphosphate-D-xylose 4-epimerase activity","type":"related"},{"name":"uridine diphosphoarabinose epimerase activity","type":"related"}],"termid":"GO:0050373"}


id: PBO:0080936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 transcription factor pseudogene 2","termid":"PBO:0080936"}


id: PBO:0028786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_heterochromatin_assembly_at_protein_coding_gene","termid":"PBO:0028786"}


id: PBO:0051155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-35 (non-functional)","termid":"PBO:0051155"}


id: PBO:0053612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 648","termid":"PBO:0053612"}


id: MOD:00167
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N-asparaginyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["PubMed:1824714","PubMed:8276756","RESID:AA0158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-asparaginyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIAsn","type":"exact"},{"name":"LIPID GPI-anchor amidated asparagine","type":"exact"},{"name":"N-asparaginyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00167"}


id: PBO:0066503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X1","termid":"PBO:0066503"}


id: GO:0015689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of molybdate (MoO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Molybdate is the bivalent anion derived from molybdic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"molybdate ion transport","termid":"GO:0015689"}


id: GO:0099152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of neurotransmitter receptor from the postsynaptic endosome to the postsynaptic membrane in transport vesicles.","definition_xrefs":["PMID:20098723","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"is_a","term_name":"regulation of protein localization to synapse","termid":"GO:1902473"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"is_a","term_name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"},{"relation_name":"regulates","term_name":"neurotransmitter receptor transport, endosome to postsynaptic membrane","termid":"GO:0098887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane","termid":"GO:0099152"}


id: GO:0102709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethyl-beta-alanine + S-adenosyl-L-methionine = H+ + beta-alanine betaine + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"S-adenosyl-L-methionine:N,N-dimethyl-beta-alanine N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-6464"],"termid":"GO:0102709"}


id: GO:1901673
data:
  {"annotated_genes":["SJAG_04464","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107123],"is_not":false,"summary":null,"term":"GO:1901673"},{"annotations":[107541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic spindle assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"is_a","term_name":"regulation of spindle assembly","termid":"GO:0090169"},{"relation_name":"regulates","term_name":"mitotic spindle assembly","termid":"GO:0090307"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0007010","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic spindle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle assembly involved in mitosis","type":"exact"}],"termid":"GO:1901673","terms_by_termid":{"GO:0110161":null,"GO:1901673":null}}


id: GO:0046422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: violaxanthin + 2 ascorbate = zeaxanthin + 2 dehydroascorbate + 2 H2O; and antheraxanthin + ascorbate = zeaxanthin + dehydroascorbate + H2O.","definition_xrefs":["GOC:ai","EC:1.23.5.1","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"violaxanthin de-epoxidase activity","secondary_identifiers":["RHEA:32371"],"synonyms":[{"name":"VDE","type":"related"},{"name":"violaxanthin:ascorbate oxidoreductase activity","type":"related"}],"termid":"GO:0046422"}


id: PBO:0062170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 13","termid":"PBO:0062170"}


id: GO:0150180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine metabolic process.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:30074985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidylserine metabolic process","termid":"GO:0150180"}


id: PBO:0074342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 1","termid":"PBO:0074342"}


id: PBO:0005833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSN-associated deubiquitinating enzyme Ubp12","termid":"PBO:0005833"}


id: GO:0009276
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The peptidoglycan layer of the Gram-negative cell envelope. In Gram-negative cells the peptidoglycan is relatively thin (1-2nm) and is linked to the outer membrane by lipoproteins. In Gram-negative cells the peptidoglycan is too thin to retain the primary stain in the Gram staining procedure and therefore cells appear red after Gram stain.","definition_xrefs":["ISBN:0815108893","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan-based cell wall","termid":"GO:0009274"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell wall","synonyms":[{"name":"1-2nm peptidoglycan-based cell wall","type":"exact"},{"name":"cell wall inner membrane","type":"exact"}],"termid":"GO:0009276"}


id: GO:0120265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chromosome attachment to the nuclear envelope.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of chromosome attachment to the nuclear envelope","termid":"GO:0120264"},{"relation_name":"negatively_regulates","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of chromosome attachment to the nuclear envelope","synonyms":[{"name":"down regulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"down-regulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"downregulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"inhibition of chromosome attachment to the nuclear envelope","type":"narrow"}],"termid":"GO:0120265"}


id: GO:0008564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + protein+(in) -> ADP + phosphate + protein+(out); drives the concomitant secretion of proteins.","definition_xrefs":["PMID:30346996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-transporting ATPase activity","termid":"GO:0015450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0140318"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0140318","GO:0022857"],"is_obsolete":false,"name":"protein-exporting ATPase activity","secondary_identifiers":["MetaCyc:3.6.3.50-RXN","EC:7.4.2.8"],"synonyms":[{"name":"ATPase-coupled protein transporter activity","type":"exact"}],"termid":"GO:0008564"}


id: PR:Q9USP5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI-anchor transamidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12000:SF1","PRO:DNx","OMA:SCHPO04689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchor transamidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.02c","secondary_identifiers":["UniProtKB:Q9USP5"],"synonyms":[{"name":"GPI transamidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGK","type":"exact"}],"termid":"PR:Q9USP5"}


id: PR:O74443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- laf2 gene.","definition_xrefs":["UniProtKB:O74443","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIRM domain-containing protein laf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.13","synonyms":[{"name":"Spom972h-laf2","type":"exact"},{"name":"clr6 L-associated factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74443"}


id: GO:1900648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chanoclavine-I aldehyde biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900646"},{"relation_name":"is_a","term_name":"positive regulation of ergot alkaloid biosynthetic process","termid":"GO:1900824"},{"relation_name":"positively_regulates","term_name":"chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of chanoclavine-I aldehyde biosynthetic process","synonyms":[{"name":"activation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"activation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"activation of chanoclavine-I aldehyde biosynthetic process","type":"narrow"},{"name":"activation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"activation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde synthesis","type":"exact"}],"termid":"GO:1900648"}


id: GO:0036322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of pancreatic polypeptide (PP) from a cell. Pancreatic polypeptide is a 36 amino acid polypeptide secreted by islets of Langerhans cells in the pancreas.","definition_xrefs":["PMID:12730894","Wikipedia:Pancreatic_polypeptide","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pancreatic polypeptide secretion","synonyms":[{"name":"PP secretion","type":"narrow"}],"termid":"GO:0036322"}


id: GO:1903671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sprouting angiogenesis.","definition_xrefs":["PMID:16756958","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of angiogenesis","termid":"GO:0016525"},{"relation_name":"is_a","term_name":"regulation of sprouting angiogenesis","termid":"GO:1903670"},{"relation_name":"negatively_regulates","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sprouting angiogenesis","synonyms":[{"name":"down regulation of sprouting angiogenesis","type":"exact"},{"name":"down-regulation of sprouting angiogenesis","type":"exact"},{"name":"downregulation of sprouting angiogenesis","type":"exact"},{"name":"inhibition of sprouting angiogenesis","type":"narrow"}],"termid":"GO:1903671"}


id: GO:0030010
data:
  {"annotated_genes":["SJAG_01794","SJAG_04653","SJAG_03581","SJAG_04509","SJAG_03625","SJAG_01901","SJAG_04624","SJAG_03705","SJAG_02838","SJAG_02737","SJAG_01373","SJAG_04322","SJAG_03126","SJAG_02695","SJAG_00030","SJAG_03754","SJAG_01456","SJAG_00317","SJAG_03453","SJAG_04724","SJAG_03486","SJAG_00216","SJAG_00845","SJAG_04522","SJAG_00514","SJAG_03596","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84066,85525,86021,86988,88394,89601,92456,93109,93340,100750,110908],"is_not":false,"summary":null,"term":"GO:0030010"},{"annotations":[113984,84228,99610,95854,106872,102957,112588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[88705,100749,115438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061171"},{"annotations":[113043,93110],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000132"},{"annotations":[87103],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904846"},{"annotations":[108584,99821,103721],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061173"},{"annotations":[112693,103722],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[90712,108073],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000114"}]},"cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00216":null,"SJAG_00317":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_01456":null,"SJAG_01794":null,"SJAG_01901":null,"SJAG_02536":null,"SJAG_02695":null,"SJAG_02737":null,"SJAG_02838":null,"SJAG_03126":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03705":null,"SJAG_03754":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04624":null,"SJAG_04653":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of cell polarity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"secondary_identifiers":["GO:0000283","GO:0030468"],"synonyms":[{"name":"bud site selection/establishment of cell polarity","type":"narrow"},{"name":"cell polarization","type":"exact"}],"termid":"GO:0030010","terms_by_termid":{"GO:0000132":null,"GO:0030010":null,"GO:0051523":null,"GO:0061171":null,"GO:0061173":null,"GO:1904846":null,"GO:2000114":null,"GO:2000784":null}}


id: PBO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Rieske ISP assembly ATPase (predicted)","termid":"PBO:0001673"}


id: FYPO:0006348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mechlorethamine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on mechlorethamine","synonyms":[{"name":"normal cell population growth in presence of mechlorethamine","type":"exact"},{"name":"normal cell population growth on mechlorethamine","type":"exact"},{"name":"normal growth on 2-chloro-N-(2-chloroethyl)-N-methylethanamine","type":"exact"},{"name":"normal growth on HN2","type":"exact"},{"name":"normal growth on bis(2-chloroethyl)methylamine","type":"exact"},{"name":"normal vegetative cell population growth on mechlorethamine","type":"exact"}],"termid":"FYPO:0006348"}


id: FYPO:0002332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to Golgi apparatus","synonyms":[{"name":"normal protein localisation to Golgi apparatus","type":"exact"},{"name":"normal protein localization to Golgi apparatus during mitotic cell cycle","type":"related"},{"name":"normal protein localization to Golgi apparatus during vegetative growth","type":"exact"}],"termid":"FYPO:0002332"}


id: GO:0015247
data:
  {"annotated_genes":["SJAG_05209","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95598,108611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"}]},"cv_name":"molecular_function","definition":"Enables the transfer of aminophospholipids from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP. Aminophospholipids contain phosphoric acid as a mono- or diester and an amino (NH2) group.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"flippase activity","termid":"GO:0140327"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01945":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0140303"],"is_obsolete":false,"name":"aminophospholipid flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aminophospholipid transmembrane transporter activity","type":"related"},{"name":"aminophospholipid transporter activity","type":"related"}],"termid":"GO:0015247","terms_by_termid":{"GO:0140346":null}}


id: PR:O74858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04888","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.08","secondary_identifiers":["UniProtKB:O74858"],"synonyms":[{"name":"LysRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lysS","type":"exact"},{"name":"lysyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74858"}


id: PBO:0089777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase family protein","termid":"PBO:0089777"}


id: PBO:0049957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 3","termid":"PBO:0049957"}


id: GO:0033383
data:
  {"annotated_genes":["SJAG_03352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033384"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving geranyl diphosphate, the universal precursor of the monoterpenes.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"geranyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"geranyl diphosphate metabolism","type":"exact"},{"name":"geranyldiphosphate metabolic process","type":"exact"}],"termid":"GO:0033383","terms_by_termid":{"GO:0033384":null}}


id: PBO:0038857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS like 4","termid":"PBO:0038857"}


id: PBO:0052300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketohexokinase","termid":"PBO:0052300"}


id: GO:0099172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"presynapse organization","synonyms":[{"name":"presynapse development","type":"exact"},{"name":"presynapse morphogenesis","type":"related"},{"name":"presynapse organisation","type":"exact"},{"name":"presynapse organization and biogenesis","type":"related"}],"termid":"GO:0099172"}


id: GO:0046862
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a chromoplast and form the chromoplast envelope.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"chromoplast envelope","termid":"GO:0031898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromoplast membrane","termid":"GO:0046862"}


id: GO:0003415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a chondrocyte, where growth contributes to the progression of the chondrocyte over time.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte hypertrophy","termid":"GO:0003415"}


id: PBO:0060752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3 pseudogene 2","termid":"PBO:0060752"}


id: PBO:0067957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 259","termid":"PBO:0067957"}


id: GO:0061786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A peptidoglycan endopeptidase activity that acts on a stem peptide of peptidoglycan.","definition_xrefs":["PMID:22748813","GOC:dph","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan endopeptidase activity","termid":"GO:0061785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0008233","GO:0003824","GO:0140096","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"peptidoglycan stem peptide endopeptidase activity","termid":"GO:0061786"}


id: PBO:0040929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 like","termid":"PBO:0040929"}


id: MOD:01911
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one chlorine atom.","definition_xrefs":["Unimod:936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated residue","termid":"MOD:00753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochlorinated residue","synonyms":[{"name":"Cl1Res","type":"exact"}],"termid":"MOD:01911"}


id: SO:0000966
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, circular DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"single_stranded_RNA_chromosome","termid":"SO:0000962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_single_stranded_RNA_chromosome","synonyms":[{"name":"circular single stranded RNA chromosome","type":"exact"}],"termid":"SO:0000966"}


id: PBO:0055651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3091","termid":"PBO:0055651"}


id: PBO:0017066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator family transmembrane transporter Mug111 (predicted)","termid":"PBO:0017066"}


id: GO:0042473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the outer ear are generated and organized. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"ear morphogenesis","termid":"GO:0042471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer ear morphogenesis","termid":"GO:0042473"}


id: PBO:0060919
data:
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id: GO:0060255
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