# terms

id: PBO:0039066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase","termid":"PBO:0039066"}


id: GO:0070335
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to aspartate, the alpha-amino-acid anion of 2-aminobutanedioic acid that has formula C4H5NO4.","definition_xrefs":["CHEBI:29995","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"aspartate binding","synonyms":[{"name":"aspartic acid binding","type":"exact"}],"termid":"GO:0070335"}


id: GO:1903883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["GO_REF:0000058","PMID:20054338","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-17-mediated signaling pathway","termid":"GO:1903881"},{"relation_name":"positively_regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"activation of IL-17-mediated signaling pathway","type":"narrow"},{"name":"activation of IL-17-mediated signalling pathway","type":"narrow"},{"name":"activation of interleukin-17-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-17-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"positive regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"positive regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"up regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"up regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"up-regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"up-regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"upregulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"upregulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903883"}


id: PBO:0073523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3BP5 antisense RNA 1","termid":"PBO:0073523"}


id: PBO:0054181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1555","termid":"PBO:0054181"}


id: FYPO:0001024
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[115599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[115593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003738"},{"annotations":[115209],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype that affects or involves the normal or abnormal occurrence of cell cycle arrest. In cell cycle arrest, progression through the cell cycle is halted during one of the normal phases (G1, S, G2, or M).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phenotype","termid":"FYPO:0000631"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04332":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"cell cycle arrest phenotype","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464","SJAG_04332","SJAG_04284"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"fission yeast cell cycle arrest phenotype","type":"exact"}],"termid":"FYPO:0001024","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO:0003738":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0050377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose = H2O + UDP-4-dehydro-6-deoxy-D-glucose.","definition_xrefs":["EC:4.2.1.76","RHEA:21500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"UDP-glucose 4,6-dehydratase activity","secondary_identifiers":["MetaCyc:UDP-GLUCOSE-46-DEHYDRATASE-RXN","KEGG_REACTION:R00293"],"synonyms":[{"name":"UDP-D-glucose oxidoreductase activity","type":"related"},{"name":"UDP-D-glucose-4,6-hydrolyase activity","type":"related"},{"name":"UDP-glucose 4,6-hydro-lyase (UDP-4-dehydro-6-deoxy-D-glucose-forming)","type":"related"},{"name":"UDP-glucose 4,6-hydro-lyase activity","type":"related"},{"name":"UDPglucose 4,6-dehydratase activity","type":"related"},{"name":"UDPglucose 4,6-hydro-lyase activity","type":"related"}],"termid":"GO:0050377"}


id: PR:G2TRJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1834.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein c1834.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.13","synonyms":[{"name":"Spom972h-SPAC1834.13","type":"exact"}],"termid":"PR:G2TRJ7"}


id: GO:0010632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell migration.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell migration","termid":"GO:0010632"}


id: GO:0042672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a retinal cone cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate specification","termid":"GO:0043704"},{"relation_name":"part_of","term_name":"retinal cone cell fate commitment","termid":"GO:0046551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell fate specification","termid":"GO:0042672"}


id: GO:0006377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete MATa1 (A1) pre-mRNA splicing (obsolete GO:0006377)","synonyms":[{"name":"MATa1 (A1) pre-mRNA splicing","type":"exact"}],"termid":"GO:0006377"}


id: GO:0019440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including indole-3-acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"indoleacetic acid metabolic process","termid":"GO:0009683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"tryptophan catabolic process to indole-3-acetate","secondary_identifiers":["MetaCyc:TRPIAACAT-PWY"],"synonyms":[{"name":"tryptophan breakdown to indole-3-acetate","type":"exact"},{"name":"tryptophan catabolic process to IAA","type":"exact"},{"name":"tryptophan catabolic process to indoleacetic acid","type":"exact"},{"name":"tryptophan catabolism to indoleacetic acid","type":"exact"},{"name":"tryptophan degradation to indole-3-acetate","type":"exact"}],"termid":"GO:0019440"}


id: PBO:0031605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_S_phase_progression","termid":"PBO:0031605"}


id: GO:0103010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A53 + 2-oxoglutarate + O2 = gibberellin A97 + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gibberellin A53,2-oxoglutarate:oxygen oxidoreductase activity (GA97-forming)","secondary_identifiers":["MetaCyc:RXN-991"],"termid":"GO:0103010"}


id: PBO:0064975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 31, pseudogene","termid":"PBO:0064975"}


id: PBO:0063949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIN2 (TERF1) interacting telomerase inhibitor 1","termid":"PBO:0063949"}


id: GO:0016155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + H2O + NADP+ = (6S)-5,6,7,8-tetrahydrofolate + CO2 + H+ + NADPH.","definition_xrefs":["EC:1.5.1.6","RHEA:10180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formyltetrahydrofolate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00941","MetaCyc:FORMYLTETRAHYDROFOLATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"10-formyl tetrahydrofolate:NADP oxidoreductase activity","type":"related"},{"name":"10-formyl-H2PtGlu:NADP oxidoreductase activity","type":"related"},{"name":"10-formyl-H4folate dehydrogenase activity","type":"related"},{"name":"10-formyltetrahydrofolate dehydrogenase activity","type":"related"},{"name":"10-formyltetrahydrofolate:NADP+ oxidoreductase activity","type":"related"},{"name":"N10-formyltetrahydrofolate dehydrogenase activity","type":"related"}],"termid":"GO:0016155"}


id: GO:0045932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle contraction","termid":"GO:0006937"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"muscle contraction","termid":"GO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle contraction","synonyms":[{"name":"down regulation of muscle contraction","type":"exact"},{"name":"down-regulation of muscle contraction","type":"exact"},{"name":"downregulation of muscle contraction","type":"exact"},{"name":"inhibition of muscle contraction","type":"narrow"}],"termid":"GO:0045932"}


id: PBO:0079938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream transcription factor family member 3","termid":"PBO:0079938"}


id: PBO:0087741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; functions interdependently in transcriptional activation with Snf2p and Snf5p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087741"}


id: GO:0008495
data:
  {"annotated_genes":["SJAG_03173"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105643],"is_not":false,"summary":null,"term":"GO:0008495"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protoheme IX + (2E,6E)-farnesyl diphosphate + H2O = heme O + diphosphate.","definition_xrefs":["RHEA:28070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03173":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protoheme IX farnesyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HEMEOSYN-RXN","EC:2.5.1.141","Reactome:R-HSA-2995330"],"synonyms":[{"name":"haem O synthase activity","type":"exact"},{"name":"heme A:farnesyltransferase activity","type":"exact"},{"name":"heme O synthase activity","type":"exact"},{"name":"protohaem IX farnesyltransferase activity","type":"exact"}],"termid":"GO:0008495","terms_by_termid":{"GO:0008495":null}}


id: PBO:0077207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 6 superfamily member 2","termid":"PBO:0077207"}


id: GO:2000657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apolipoprotein binding.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of apolipoprotein binding","termid":"GO:2000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apolipoprotein binding","termid":"GO:2000657"}


id: PBO:0067066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 92, pseudogene","termid":"PBO:0067066"}


id: GO:0043930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle) as part of the primary follicle stage of oogenesis.","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian follicle growth","termid":"GO:0001545"},{"relation_name":"part_of","term_name":"primary follicle stage","termid":"GO:0048160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth involved in primary follicle stage","synonyms":[{"name":"primary ovarian follicle growth during primary follicle stage","type":"related"}],"termid":"GO:0043930"}


id: FYPO:0003898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glycerol and ethanol as the carbon sources.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on glycerol/ethanol carbon source","synonyms":[{"name":"normal cell population growth on glycerol/ethanol carbon source","type":"exact"},{"name":"normal vegetative cell population growth on glycerol/ethanol carbon source","type":"exact"}],"termid":"FYPO:0003898"}


id: PBO:0068815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 53, pseudogene","termid":"PBO:0068815"}


id: PBO:0045278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 29","termid":"PBO:0045278"}


id: GO:0048858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a cell projection are generated and organized.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"is_a","term_name":"cell projection organization","termid":"GO:0030030"},{"relation_name":"part_of","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell projection morphogenesis","termid":"GO:0048858"}


id: PATO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A thickness which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"thickness","termid":"PATO:0000915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased thickness","synonyms":[{"name":"low thickness","type":"exact"},{"name":"slender","type":"related"},{"name":"thin","type":"related"}],"termid":"PATO:0000592"}


id: GO:1900879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (Z)-nonadeca-1,14-diene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefin biosynthetic process","termid":"GO:1900674"},{"relation_name":"is_a","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"(Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"(Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"(Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"(Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"(Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900879"}


id: PBO:0080234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly factor VMA21","termid":"PBO:0080234"}


id: PBO:0061285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 6","termid":"PBO:0061285"}


id: GO:0034454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a centrosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring at microtubule organizing center","termid":"GO:0072393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"microtubule anchoring at centrosome","termid":"GO:0034454"}


id: PBO:0113318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase primarily involved in telomere length regulation; contributes to cell cycle checkpoint control in response to DNA damage; binds to phosphatidylinositol-4-phosphate; acts with Red1p and Mec1p to promote interhomolog recombination by phosphorylation of Hop1; functionally redundant with Mec1p; regulates P-body formation induced by replication stress; homolog of human ataxia-telangiectasia mutated (ATM) gene","termid":"PBO:0113318"}


id: PBO:0070469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 4","termid":"PBO:0070469"}


id: PBO:0045637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 49 (pseudogene)","termid":"PBO:0045637"}


id: PBO:0029592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0029592"}


id: FYPO:0007537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the increase in small deletions or duplications (\\\"replication slippage\\\") that normally results from processing arrested replication forks is enhanced.","definition_xrefs":["PomBase:mah","PMID:33159083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased replication slippage during replication fork processing","synonyms":[{"name":"increased replication slippage during replication fork processing during mitotic cell cycle","type":"related"},{"name":"increased replication slippage during replication fork processing during vegetative growth","type":"exact"}],"termid":"FYPO:0007537"}


id: PATO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000809 taste value (obsolete PATO:0000809)","termid":"PATO:0000809"}


id: GO:1901654
data:
  {"annotated_genes":["SJAG_01162","SJAG_02960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101141],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[101320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"A response that results in a state of tolerance to ketone.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01162":null,"SJAG_02960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ketone","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990369"],"synonyms":[{"name":"process resulting in tolerance to ketone","type":"narrow"}],"termid":"GO:1901654","terms_by_termid":{"GO:0036245":null,"GO:0140041":null}}


id: GO:0015450
data:
  {"annotated_genes":["SJAG_01879","SJAG_02077","SJAG_03502","SJAG_01597","SJAG_03415","SJAG_03560","SJAG_03358","SJAG_03515","SJAG_00373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87042,93019,95662,96439,99406,101286,103681,103703,107911],"is_not":false,"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transporter activity","termid":"GO:0008320"},{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_01597":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0140318","GO:0003674"],"is_obsolete":false,"name":"protein-transporting ATPase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1222523"],"synonyms":[{"name":"P-P-bond-hydrolysis-driven protein transmembrane transporter activity","type":"related"},{"name":"protein translocase activity","type":"exact"}],"termid":"GO:0015450","terms_by_termid":{"GO:0015450":null}}


id: GO:0060061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region on the dorsalmost side of the embryo that acts as the main signaling center establishing the vertebrate body plan.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"developmental induction","termid":"GO:0031128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation","synonyms":[{"name":"Spemann's organizer formation","type":"exact"},{"name":"Spemann-Mangold organizer formation","type":"exact"}],"termid":"GO:0060061"}


id: PBO:0056849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal glutathione S-transferase 1","termid":"PBO:0056849"}


id: FYPO:0000320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology (i.e. size, shape, and structure) that undergoes a single round of cell division, and then dies.","definition_xrefs":["PomBase:jh","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, normal cell morphology","synonyms":[{"name":"inviable following spore germination, single cell division, normal cell morphology","type":"exact"},{"name":"inviable germinated spore, single cell division, normal cell morphology","type":"exact"},{"name":"lethal after spore germination, single cell division, normal cell morphology","type":"exact"}],"termid":"FYPO:0000320"}


id: PBO:0055959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 73","termid":"PBO:0055959"}


id: PBO:0086296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in regulating Swe1p-dependent polarized growth; involved in maintenance of Cdc55p in the cytoplasm where it promotes mitotic entry; interacts with silencing proteins at the telomere; implicated in the mitotic exit network through regulation of Cdc14p localization; ZDS2 has a paralog, ZDS1, that arose from the whole genome duplication","termid":"PBO:0086296"}


id: PBO:0045595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 6 (pseudogene)","termid":"PBO:0045595"}


id: GO:0042845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycol, a diol in which the two hydroxy groups are on different carbon atoms, usually but not necessarily adjacent.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycol biosynthetic process","synonyms":[{"name":"dihydric alcohol biosynthesis","type":"broad"},{"name":"dihydric alcohol biosynthetic process","type":"broad"},{"name":"glycol anabolism","type":"exact"},{"name":"glycol biosynthesis","type":"exact"},{"name":"glycol formation","type":"exact"},{"name":"glycol synthesis","type":"exact"}],"termid":"GO:0042845"}


id: GO:0047451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxyoctanoyl-[acyl-carrier protein] = H2O + (2E)-octenoyl-[acyl-carrier protein].","definition_xrefs":["RHEA:41844","PMID:8910376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","termid":"GO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity","secondary_identifiers":["MetaCyc:4.2.1.59-RXN","KEGG_REACTION:R04537"],"synonyms":[{"name":"(3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] hydro-lyase activity","type":"related"},{"name":"3-hydroxyoctanoyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxyoctanoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity","type":"broad"}],"termid":"GO:0047451"}


id: GO:0097668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Saf1 in S. cerevisiae (Pof9 in S. pombe).","definition_xrefs":["PMID:11283612","GOC:jd","PMID:15147268","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Saf1/Pof9 ubiquitin ligase complex","termid":"GO:0097668"}


id: GO:0006885
data:
  {"annotated_genes":["SJAG_00212","SJAG_05294","SJAG_01913","SJAG_00516","SJAG_01817","SJAG_02023","SJAG_01397","SJAG_00301","SJAG_01129","SJAG_04616","SJAG_02716","SJAG_00136","SJAG_02470","SJAG_01669","SJAG_04955","SJAG_04258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[94945,83872,109886,83871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[86002,91789,85474,96130,97755,84210,98103,100030,114797,95038,86314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal equilibrium of hydrogen ions, thereby modulating the internal pH, within an organism or cell.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02470":null,"SJAG_02716":null,"SJAG_04258":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pH","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen ion homeostasis","type":"exact"}],"termid":"GO:0006885","terms_by_termid":{"GO:0007035":null,"GO:0030641":null,"GO:0051453":null}}


id: PBO:0050284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H6 family homeobox 1","termid":"PBO:0050284"}


id: PBO:0078874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 8","termid":"PBO:0078874"}


id: FYPO:0004917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of a protein kinase activity occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:11402029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased positive regulation of protein kinase activity","synonyms":[{"name":"decreased activation of protein kinase activity","type":"narrow"},{"name":"decreased positive regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"decreased positive regulation of protein kinase activity during vegetative growth","type":"exact"},{"name":"reduced positive regulation of protein kinase activity","type":"exact"}],"termid":"FYPO:0004917"}


id: PBO:0052735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 27","termid":"PBO:0052735"}


id: GO:0030053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any member of a family of receptors that includes the major FK506 binding protein FKBP and cyclophilin. These two proteins are unrelated in amino-acid sequence, but both possess peptidyl-prolyl isomerase activity which is blocked by immunosuppressants that block signal-transduction pathways leading to T cell activation such as FK506 and rapamycin, which block FKBP, or cyclosporin A, which blocks cyclophilin.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete immunophilin (obsolete GO:0030053)","synonyms":[{"name":"immunophilin","type":"exact"}],"termid":"GO:0030053"}


id: GO:0061437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of vasculature of the renal system over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph","PMID:11891195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature development","termid":"GO:0061437"}


id: PBO:0087807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Target membrane receptor (t-SNARE); for vesicular intermediates traveling between the Golgi apparatus and the vacuole; controls entry of biosynthetic, endocytic, and retrograde traffic into the prevacuolar compartment; syntaxin","termid":"PBO:0087807"}


id: GO:1900180
data:
  {"annotated_genes":["SJAG_01311","SJAG_03048","SJAG_01084","SJAG_02592","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[110576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[86993,90502,98506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to nucleus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01084":null,"SJAG_01311":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to nucleus","type":"exact"},{"name":"regulation of protein localization in cell nucleus","type":"exact"},{"name":"regulation of protein localization in nucleus","type":"exact"}],"termid":"GO:1900180","terms_by_termid":{"GO:0042307":null,"GO:0042308":null,"GO:1900181":null}}


id: GO:0009652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism, or part of an organism, such as leaves or tendrils, in response to a touch stimulus, usually toward or away from it.","definition_xrefs":["GOC:jl","PMID:16153165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"},{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thigmotropism","secondary_identifiers":["Wikipedia:Thigmotropism"],"termid":"GO:0009652"}


id: GO:0106279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the UDP-N-acetylglucosamine biosynthetic process.","definition_xrefs":["PMID:32579556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of phosphorus metabolic process","termid":"GO:0010563"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0106278"},{"relation_name":"negatively_regulates","term_name":"UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of UDP-N-acetylglucosamine biosynthetic process","synonyms":[{"name":"negative regulation of UDP-GlcNAc biosynthesis","type":"related"},{"name":"negative regulation of UDP-GlcNAc biosynthetic process","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine anabolism","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine biosynthesis","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine formation","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine synthesis","type":"related"}],"termid":"GO:0106279"}


id: GO:0051537
data:
  {"annotated_genes":["SJAG_00532","SJAG_04098","SJAG_00244","SJAG_04397","SJAG_04016","SJAG_01841","SJAG_03862","SJAG_01935","SJAG_02495","SJAG_02474","SJAG_00217","SJAG_02016","SJAG_00455","SJAG_00260","SJAG_01417","SJAG_00822","SJAG_03701","SJAG_00601"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84238,84984,86835,89078,89310,91182,96603,97728,100599,103523,105358,105976,109992,110209,110848,111156,112745,113940],"is_not":false,"summary":null,"term":"GO:0051537"}]},"cv_name":"molecular_function","definition":"Binding to a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.","definition_xrefs":["Wikipedia:Iron-sulfur_cluster","GOC:ai","PMID:15952888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00217":null,"SJAG_00244":null,"SJAG_00260":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00601":null,"SJAG_00822":null,"SJAG_01417":null,"SJAG_01841":null,"SJAG_01935":null,"SJAG_02016":null,"SJAG_02474":null,"SJAG_02495":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04016":null,"SJAG_04098":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"2 iron, 2 sulfur cluster binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2 Fe 2 S cluster binding","type":"exact"},{"name":"2 iron, 2 sulphur cluster binding","type":"exact"},{"name":"2Fe-2S cluster binding","type":"exact"},{"name":"diiron disulfide cluster binding","type":"exact"},{"name":"diiron disulphide cluster binding","type":"exact"},{"name":"iron-sulfur cluster 2Fe-2S binding","type":"exact"},{"name":"iron-sulphur cluster 2Fe-2S binding","type":"exact"}],"termid":"GO:0051537","terms_by_termid":{"GO:0051537":null}}


id: GO:0051424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to corticotropin-releasing hormone, a polypeptide hormone involved in the stress response. It is released by the hypothalamus and stimulates the release of corticotropin by the anterior pituitary gland.","definition_xrefs":["PMID:7556876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"corticotropin-releasing hormone binding","secondary_identifiers":["GO:0017047"],"synonyms":[{"name":"CRF binding","type":"exact"},{"name":"CRH binding","type":"exact"},{"name":"corticoliberin binding","type":"exact"},{"name":"corticotropin-releasing factor binding","type":"exact"}],"termid":"GO:0051424"}


id: PBO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease MRP complex subunit (predicted)","termid":"PBO:0002288"}


id: FYPO:0004012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 4,6-pyruvylated D-galactose (4,6-O-[(1R)-1-carboxyethylidene]-D-galactose) measured at the cell surface is normal (i.e. indistinguishable from wild type). The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PMID:25195688","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cell surface pyruvylated galactose level","synonyms":[{"name":"normal cell surface 4,6-4,6-O-[(1R)-1-carboxyethylidene]-D-galactose level","type":"exact"},{"name":"normal cell surface 4,6-pyruvylated D-galactose level","type":"exact"},{"name":"normal cell surface PvGal level","type":"exact"},{"name":"normal cell surface pyruvylated galactose level during mitotic cell cycle","type":"related"},{"name":"normal cell surface pyruvylated galactose level during vegetative growth","type":"exact"},{"name":"normal level of pyruvylated galactose at cell surface","type":"exact"}],"termid":"FYPO:0004012"}


id: PBO:0062727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 1 pseudogene","termid":"PBO:0062727"}


id: PBO:0062672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily Z member 3 pseudogene","termid":"PBO:0062672"}


id: PBO:0061273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOX4 pseudogene 1","termid":"PBO:0061273"}


id: PBO:0062257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 13","termid":"PBO:0062257"}


id: PBO:0089363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase activity, implicated in cellular detoxification","termid":"PBO:0089363"}


id: PR:Q9P779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1711.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin C1711.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.11","synonyms":[{"name":"Spom972h-SPBC1711.11","type":"exact"}],"termid":"PR:Q9P779"}


id: PBO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein","termid":"PBO:0001785"}


id: GO:0042680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a compound eye cone cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"compound eye cone cell fate commitment","termid":"GO:0042676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye cone cell fate determination","secondary_identifiers":["GO:0042677"],"termid":"GO:0042680"}


id: GO:0043476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of coloring matter in a particular location in an organism, tissue or cell, occurring in response to some external stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment accumulation","synonyms":[{"name":"pigment accumulation in response to external stimulus","type":"exact"}],"termid":"GO:0043476"}


id: GO:0039010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the pronephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of pronephric tubule identity","termid":"GO:0039005"},{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in pronephric nephron development","termid":"GO:0072196"},{"relation_name":"part_of","term_name":"pronephric distal tubule morphogenesis","termid":"GO:0039013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric distal tubule identity","termid":"GO:0039010"}


id: PBO:0039451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and MYND domain containing 2","termid":"PBO:0039451"}


id: GO:0000901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Antagonizes the ribosome-mediated translation of mRNA into a polypeptide but does not bind directly to nucleic acid.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation repressor activity","termid":"GO:0030371"},{"relation_name":"is_a","term_name":"translation factor activity, non-nucleic acid binding","termid":"GO:0045183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0045182","GO:0003674"],"is_obsolete":false,"name":"translation repressor activity, non-nucleic acid binding","termid":"GO:0000901"}


id: _global:has_origin
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_origin","termid":"_global:has_origin"}


id: PBO:0062825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSGEPL1 antisense RNA 1","termid":"PBO:0062825"}


id: FYPO:0006543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during metaphase of mitosis is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during mitosis","termid":"FYPO:0004157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level during mitotic metaphase","synonyms":[{"name":"increased protein accumulation during mitotic metaphase","type":"related"},{"name":"increased protein level during metaphase during vegetative growth","type":"exact"},{"name":"increased protein level during metaphase of mitosis","type":"exact"}],"termid":"FYPO:0006543"}


id: PBO:0071618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 36","termid":"PBO:0071618"}


id: GO:0042190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of vanillin, an aromatic hydrocarbon which occurs naturally in black vanilla bean pods.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vanillin metabolic process","termid":"GO:0018982"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vanillin catabolic process","synonyms":[{"name":"vanillic aldehyde catabolic process","type":"exact"},{"name":"vanillic aldehyde catabolism","type":"exact"},{"name":"vanillin breakdown","type":"exact"},{"name":"vanillin catabolism","type":"exact"},{"name":"vanillin degradation","type":"exact"}],"termid":"GO:0042190"}


id: PBO:0075812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 1","termid":"PBO:0075812"}


id: PBO:0066869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 169","termid":"PBO:0066869"}


id: GO:2001266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any Roundabout signaling pathway that is involved in axon guidance.","definition_xrefs":["PMID:14527427","PMID:21820427","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Roundabout signaling pathway","termid":"GO:0035385"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Roundabout signaling pathway involved in axon guidance","synonyms":[{"name":"ROBO signaling pathway involved in axon chemotaxis","type":"related"},{"name":"ROBO signaling pathway involved in axon growth cone guidance","type":"related"},{"name":"ROBO signaling pathway involved in axon guidance","type":"exact"},{"name":"ROBO signaling pathway involved in axon pathfinding","type":"exact"},{"name":"ROBO/SLIT signaling pathway involved in axon chemotaxis","type":"related"},{"name":"ROBO/SLIT signaling pathway involved in axon growth cone guidance","type":"related"},{"name":"ROBO/SLIT signaling pathway involved in axon guidance","type":"exact"},{"name":"ROBO/SLIT signaling pathway involved in axon pathfinding","type":"exact"},{"name":"Roundabout signaling pathway involved in axon chemotaxis","type":"related"},{"name":"Roundabout signaling pathway involved in axon growth cone guidance","type":"related"},{"name":"Roundabout signaling pathway involved in axon pathfinding","type":"exact"},{"name":"Roundabout signalling pathway involved in axon chemotaxis","type":"related"},{"name":"Roundabout signalling pathway involved in axon growth cone guidance","type":"related"},{"name":"Roundabout signalling pathway involved in axon guidance","type":"exact"},{"name":"Roundabout signalling pathway involved in axon pathfinding","type":"exact"}],"termid":"GO:2001266"}


id: SO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that has been produced as the product of a reverse transcriptase mediated event.","direct_ancestors":[{"relation_name":"has_quality","term_name":"retrotransposed","termid":"SO:0000569"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrogene","termid":"SO:0001219"}


id: GO:0150071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of arginase activity.","definition_xrefs":["GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"},{"relation_name":"is_a","term_name":"regulation of arginase activity","termid":"GO:0150070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of arginase activity","termid":"GO:0150071"}


id: PBO:0040562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B4GALNT2 pseudogene 1","termid":"PBO:0040562"}


id: PBO:0042172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCN2 antisense RNA 1","termid":"PBO:0042172"}


id: PR:G2TRM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC959.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C959.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.11","synonyms":[{"name":"Spom972h-SPAC959.11","type":"exact"}],"termid":"PR:G2TRM5"}


id: PR:Q9Y804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Fanconi-associated nuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi-associated nuclease 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.06c","secondary_identifiers":["UniProtKB:Q9Y804"],"synonyms":[{"name":"Spom972h-FAN1","type":"exact"}],"termid":"PR:Q9Y804"}


id: GO:0033782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (24S)-hydroxycholesterol + O2 + reduced [NADPH-hemoprotein reductase] = (24S)-7alpha-dihydroxycholesterol + H+ + H2O + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["PMID:10748047","PMID:11013305","RHEA:46124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"24-hydroxycholesterol 7alpha-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.99-RXN","EC:1.14.14.26","KEGG_REACTION:R07208"],"synonyms":[{"name":"24-cholest-5-ene-3beta,24-diol,NADPH:oxygen oxidoreductase (7alpha-hydroxylating) activity","type":"related"},{"name":"24-hydroxycholesterol 7alpha-monooxygenase activity","type":"related"}],"termid":"GO:0033782"}


id: PBO:0028121
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_lateral_cortical_node","termid":"PBO:0028121"}


id: PBO:0058808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7850","termid":"PBO:0058808"}


id: MOD:01450
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an N-formyl-L-methionine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N-formyl-L-methionine residue","termid":"MOD:00030"},{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified N-formyl-L-methionine residue","termid":"MOD:01450"}


id: PBO:0112882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxoglutarate dehydrogenase (lipoamide) (e1 component of oxoglutarate dehydrogenase complex), Kgd1","termid":"PBO:0112882"}


id: PBO:0066366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 10","termid":"PBO:0066366"}


id: PBO:0017804
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 Associated protein","termid":"PBO:0017804"}


id: PBO:0077379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 120B","termid":"PBO:0077379"}


id: GO:1902821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-undecene.","definition_xrefs":["PMID:16013377","GOC:mengo_curators","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"1-undecene metabolic process","termid":"GO:1902820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-undecene biosynthetic process","synonyms":[{"name":"1-undecene anabolism","type":"exact"},{"name":"1-undecene biosynthesis","type":"exact"},{"name":"1-undecene formation","type":"exact"},{"name":"1-undecene synthesis","type":"exact"}],"termid":"GO:1902821"}


id: GO:0047808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tartrate = H2O + oxaloacetate.","definition_xrefs":["RHEA:18289","EC:4.2.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"D(-)-tartrate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R00340","MetaCyc:D--TARTRATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"(S,S)-tartrate hydro-lyase (oxaloacetate-forming)","type":"related"},{"name":"(S,S)-tartrate hydro-lyase activity","type":"related"},{"name":"D-tartrate dehydratase activity","type":"related"}],"termid":"GO:0047808"}


id: PBO:0110828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type, Loz1","termid":"PBO:0110828"}


id: RO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has_fused_element y iff: there exists some z : x has_part z, z homologous_to y, and y is a distinct element, the boundary between x and z is largely fiat","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_fused_element","termid":"RO:0002374"}


id: PBO:0074237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 49 member 4","termid":"PBO:0074237"}


id: PBO:0003838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc10","termid":"PBO:0003838"}


id: GO:0071927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of octopamine binding to a cell surface receptor.","definition_xrefs":["GOC:mah","PMID:15355245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octopamine or tyramine signaling pathway","termid":"GO:0007211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"octopamine signaling pathway","synonyms":[{"name":"octopamine signalling pathway","type":"exact"}],"termid":"GO:0071927"}


id: PBO:0078383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation regulatory long non-coding RNA 1","termid":"PBO:0078383"}


id: GO:0015327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cystine(out) + glutamate(in) = cystine(in) + glutamate(out).","definition_xrefs":["TC:2.A.3.8.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"L-glutamate transmembrane transporter activity","termid":"GO:0005313"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"cystine:glutamate antiporter activity","termid":"GO:0015327"}


id: GO:0010621
data:
  {"annotated_genes":["SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97113],"is_not":false,"summary":null,"term":"GO:0010621"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-dependent transcription using a mechanism that involves the localization of a transcription factor.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051179","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"negative regulation of transcription by transcription factor localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of transcription by transcription factor localisation","type":"exact"}],"termid":"GO:0010621","terms_by_termid":{"GO:0010621":null}}


id: PBO:0042483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH8 antisense RNA 1","termid":"PBO:0042483"}


id: PBO:0009082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Cfh4 (predicted)","termid":"PBO:0009082"}


id: GO:0001065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a single-subunit-type mitochondrial RNA polymerase-specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single subunit type RNA polymerase activity","termid":"GO:0001064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"mitochondrial single subunit type RNA polymerase activity","termid":"GO:0001065"}


id: GO:0160082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-prolyl-[hypoxia-inducible factor alpha subunit] + O2 = CO2 + succinate + trans-4-hydroxy-L-prolyl-[hypoxia-inducible factor alpha subunit].","definition_xrefs":["PMID:11595184","PMID:11598268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline 4-dioxygenase activity","termid":"GO:0031545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016491"],"is_obsolete":false,"name":"hypoxia-inducible factor-proline dioxygenase activity","secondary_identifiers":["EC:1.14.11.29","RHEA:48400"],"synonyms":[{"name":"HIF hydroxylase","type":"broad"},{"name":"HIF prolyl hydroxylase","type":"exact"}],"termid":"GO:0160082"}


id: PBO:0052628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 6B","termid":"PBO:0052628"}


id: GO:0043664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host-derived membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host bacteroid-containing symbiosome","termid":"GO:0043663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host peribacteroid membrane","termid":"GO:0043664"}


id: PBO:0092022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Histidine (gug), mitochondrial","termid":"PBO:0092022"}


id: GO:1902363
data:
  {"annotated_genes":["SJAG_04468","SJAG_03376","SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"},{"annotations":[102483,97060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902542"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_03376":null,"SJAG_04468":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to spindle pole body","type":"exact"}],"termid":"GO:1902363","terms_by_termid":{"GO:1902542":null,"GO:1902543":null}}


id: PBO:0070300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 6","termid":"PBO:0070300"}


id: PBO:0002820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase activating protein (predicted)","termid":"PBO:0002820"}


id: GO:0061327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior Malpighian tubule over time, from its formation to the mature structure. The pair of anterior tubules arise from a dorsal region of the embryonic hindgut and projects forwards through the body cavity. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which connects with the posterior part of the gut.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10","PMID:19783135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior Malpighian tubule development","termid":"GO:0061327"}


id: PBO:0072530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 60","termid":"PBO:0072530"}


id: GO:0003128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the lateral mesoderm into the area in which the heart will develop.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"heart formation","termid":"GO:0060914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart field specification","termid":"GO:0003128"}


id: PR:Q09860
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cysteine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10890:SF3","PRO:DNx","OMA:SCHPO01825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine--tRNA ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.06c","secondary_identifiers":["UniProtKB:Q09860"],"synonyms":[{"name":"CysRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CARS","type":"exact"},{"name":"cysteinyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09860"}


id: PBO:0043078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 7 subunit","termid":"PBO:0043078"}


id: PBO:0051673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 3","termid":"PBO:0051673"}


id: PBO:0029746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_calcium_export","termid":"PBO:0029746"}


id: PBO:0090924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc16","termid":"PBO:0090924"}


id: GO:0051844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptides or proteins produced by an organism to a location inside the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation of molecules into symbiont","termid":"GO:0051862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"translocation of peptides or proteins into symbiont","synonyms":[{"name":"transport of peptides or proteins into symbiont","type":"exact"}],"termid":"GO:0051844"}


id: PBO:0047815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXN3 antisense RNA 1","termid":"PBO:0047815"}


id: PBO:0065280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 2C pseudogene 1","termid":"PBO:0065280"}


id: PBO:0080580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR5 divergent transcript","termid":"PBO:0080580"}


id: GO:0008566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate; drives the transport of proteins into the mitochondrion via the mitochondrial inner membrane translocase complex.","definition_xrefs":["EC:7.4.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-transporting ATPase activity","termid":"GO:0015450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0140318","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"mitochondrial protein-transporting ATPase activity","secondary_identifiers":["MetaCyc:3.6.3.51-RXN"],"synonyms":[{"name":"ATPase-coupled mitochondrial protein transporter activity","type":"exact"}],"termid":"GO:0008566"}


id: PBO:0003934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol dehydrogenase His2 (predicted)","termid":"PBO:0003934"}


id: FYPO:0001897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer cytoplasmic mRNA processing bodies (P-bodies) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"P-bodies present in decreased numbers","termid":"FYPO:0001898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"P-bodies present in decreased numbers during vegetative growth","synonyms":[{"name":"P bodies present in decreased numbers during vegetative growth","type":"exact"},{"name":"P-bodies present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"P-bodies present in reduced numbers during vegetative growth","type":"exact"},{"name":"cytoplasmic mRNA processing bodies present in decreased numbers during vegetative growth","type":"exact"},{"name":"decreased P-body formation during vegetative growth","type":"related"},{"name":"decreased P-body number during vegetative growth","type":"exact"},{"name":"decreased number of P-bodies present during vegetative growth","type":"related"},{"name":"fewer P-bodies present during vegetative growth","type":"exact"}],"termid":"FYPO:0001897"}


id: PBO:0038486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCB10 pseudogene 1","termid":"PBO:0038486"}


id: PBO:0046777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin like glycosyltransferase 2 pseudogene 1","termid":"PBO:0046777"}


id: PBO:0075340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase","termid":"PBO:0075340"}


id: PBO:0089073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L19","termid":"PBO:0089073"}


id: PBO:0004681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor complex subunit Spt4","termid":"PBO:0004681"}


id: GO:0060640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the formation of a tooth bud by the secretion of a signal from a mesenchymal cell and its reception and subsequent change in the identity of an epithelial cell of the tooth bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of odontogenesis of dentin-containing tooth","termid":"GO:0042488"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of dentin-containing tooth bud formation by mesenchymal-epithelial signaling","synonyms":[{"name":"positive regulation of dentine-containing tooth bud formation by mesenchymal-epithelial signaling","type":"related"},{"name":"positive regulation of dentine-containing tooth bud formation by mesenchymal-epithelial signalling","type":"exact"}],"termid":"GO:0060640"}


id: PBO:0012610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase Nmt1","termid":"PBO:0012610"}


id: PBO:0113247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoylated vacuolar membrane-localized casein kinase I isoform; negatively regulates vacuole fusion during hypertonic stress via phosphorylation of Vps41p; shares essential functions with Hrr25p; targeted to vacuole via AP-3 pathway; regulates vesicle fusion in AP-3 pathway","termid":"PBO:0113247"}


id: GO:1902830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["GOC:mr","GO_REF:0000058","PMID:21730158","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of spinal cord association neuron differentiation","termid":"GO:1902829"},{"relation_name":"negatively_regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spinal cord association neuron differentiation","synonyms":[{"name":"down regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"downregulation of spinal cord association neuron differentiation","type":"exact"},{"name":"downregulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"inhibition of spinal cord association neuron differentiation","type":"narrow"},{"name":"inhibition of spinal cord dorsal interneuron differentiation","type":"narrow"},{"name":"negative regulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902830"}


id: GO:0003015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A circulatory system process carried out by the heart. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart process","synonyms":[{"name":"cardiac process","type":"related"}],"termid":"GO:0003015"}


id: PR:O13717
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C4.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.10c","synonyms":[{"name":"Spom972h-SPAC14C4.10c","type":"exact"}],"termid":"PR:O13717"}


id: GO:0043607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formamide, the simplest amide, HCONH2, derived from formic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"formamide metabolic process","termid":"GO:0043606"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formamide biosynthetic process","termid":"GO:0043607"}


id: GO:0010602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Regulation of the chemical reactions and pathways involving 1-aminocyclopropane-1-carboxylate, the anion of 1-aminocyclopropane-1-carboxylic acid, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["PMID:18055613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"regulates","term_name":"1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0018871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of 1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0010602"}


id: PBO:0045938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A3","termid":"PBO:0045938"}


id: PBO:0049491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 1","termid":"PBO:0049491"}


id: PBO:0053522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 517","termid":"PBO:0053522"}


id: PBO:0075288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 29 pseudogene 1","termid":"PBO:0075288"}


id: MOD:01571
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01571"}


id: GO:0045101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Glial fibrillary acidic protein forms filaments in the glial cells that surround neurons and in astrocytes.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete glial fibrillary acidic protein (obsolete GO:0045101)","synonyms":[{"name":"GFAP","type":"exact"},{"name":"glial fibrillary acidic protein","type":"exact"}],"termid":"GO:0045101"}


id: PBO:0066489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A like 1","termid":"PBO:0066489"}


id: GO:0015091
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ferric iron (Fe(III) or Fe3+) ions from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transmembrane transporter activity","termid":"GO:0005381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"}


id: PBO:0056436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 9","termid":"PBO:0056436"}


id: GO:1904728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","GO_REF:0000058","PMID:23496142","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"positively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of replicative senescence","synonyms":[{"name":"activation of replicative senescence","type":"narrow"},{"name":"up regulation of replicative senescence","type":"exact"},{"name":"up-regulation of replicative senescence","type":"exact"},{"name":"upregulation of replicative senescence","type":"exact"}],"termid":"GO:1904728"}


id: PBO:0046100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 3","termid":"PBO:0046100"}


id: PBO:0038469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 8","termid":"PBO:0038469"}


id: PBO:0066892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 192","termid":"PBO:0066892"}


id: PBO:0005857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nsa2 (predicted)","termid":"PBO:0005857"}


id: PBO:0110168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zpr1 co-chaperone for EF-1 alpha folding","termid":"PBO:0110168"}


id: PR:Q9URV2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut4 gene.","definition_xrefs":["UniProtKB:Q9URV2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.09","synonyms":[{"name":"20S cyclosome/APC complex protein apc1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cut4","type":"exact"},{"name":"cell untimely torn protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URV2"}


id: FYPO:0003981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased glutathione transferase activity","termid":"FYPO:0003981"}


id: PBO:0086752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted to have thiol-disulfide oxidoreductase active site; YOL024W has a paralog, IGD1, that arose from the whole genome duplication","termid":"PBO:0086752"}


id: PBO:0065382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 9","termid":"PBO:0065382"}


id: PBO:0003228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vid27 family protein","termid":"PBO:0003228"}


id: PBO:0064281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M2","termid":"PBO:0064281"}


id: PATO:0001296
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar optical quality which obtains by the magnitude of the light emitted by the bearer.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"luminous flux","termid":"PATO:0001296"}


id: GO:0140747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription of a non-protein coding gene from a DNA-template.","definition_xrefs":["GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ncRNA transcription (obsolete GO:0140747)","termid":"GO:0140747"}


id: PBO:0000447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PHD finger","termid":"PBO:0000447"}


id: PBO:0055625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3064","termid":"PBO:0055625"}


id: FYPO:0002992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle begins earlier than normal, during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic G1/S phase transition","termid":"FYPO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"premature mitotic G1/S phase transition during cellular response to methyl methanesulfonate","synonyms":[{"name":"advanced mitotic G1/S phase transition during cellular response to methyl methanesulfonate","type":"exact"},{"name":"premature G1/S phase transition during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G1/S phase transition during cellular response to methyl methanesulfonate","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to MMS","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002992"}


id: GO:1905413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bf","PMID:18468511","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of dense core granule exocytosis","synonyms":[{"name":"regulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905413"}


id: GO:0002626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of T cell antigen processing and presentation","termid":"GO:0002625"},{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"negatively_regulates","term_name":"T cell antigen processing and presentation","termid":"GO:0002457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell antigen processing and presentation","synonyms":[{"name":"down regulation of T cell antigen processing and presentation","type":"exact"},{"name":"down-regulation of T cell antigen processing and presentation","type":"exact"},{"name":"downregulation of T cell antigen processing and presentation","type":"exact"},{"name":"inhibition of T cell antigen processing and presentation","type":"narrow"},{"name":"negative regulation of T lymphocyte antigen processing and presentation","type":"exact"},{"name":"negative regulation of T-cell antigen processing and presentation","type":"exact"},{"name":"negative regulation of T-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002626"}


id: PBO:0075965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 6","termid":"PBO:0075965"}


id: PBO:0060785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B11","termid":"PBO:0060785"}


id: PBO:0074825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 21","termid":"PBO:0074825"}


id: FYPO:0006761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to hydroxyurea. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased transcription during cellular response to hydroxyurea","synonyms":[{"name":"increased transcription during cellular response to HU","type":"exact"},{"name":"increased transcription during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased transcription in response to HU","type":"exact"},{"name":"increased transcription in response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006761"}


id: FYPO:0007382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a transcription regulatory region by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal double-stranded DNA binding","termid":"FYPO:0007542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal transcription regulatory region sequence-specific DNA binding","synonyms":[{"name":"normal promoter binding","type":"related"},{"name":"normal sequence-specific DNA binding at transcription regulatory region","type":"exact"},{"name":"normal transcription regulatory region binding","type":"exact"}],"termid":"FYPO:0007382"}


id: PBO:0040839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell acute lymphoblastic leukemia expressed","termid":"PBO:0040839"}


id: PBO:0059707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 15","termid":"PBO:0059707"}


id: PBO:0042073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 142","termid":"PBO:0042073"}


id: PBO:0061686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP153 antisense RNA 1","termid":"PBO:0061686"}


id: PBO:0040906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 10","termid":"PBO:0040906"}


id: PBO:0054463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1861","termid":"PBO:0054463"}


id: PBO:0063116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase 2","termid":"PBO:0063116"}


id: PBO:0068081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 387","termid":"PBO:0068081"}


id: PBO:0073254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 6","termid":"PBO:0073254"}


id: GO:0042551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state.","definition_xrefs":["GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"neuron development","termid":"GO:0048666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron maturation","termid":"GO:0042551"}


id: GO:0034177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 12 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 12 signaling pathway","termid":"GO:0034175"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 12 signaling pathway","termid":"GO:0034174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 12 signaling pathway","synonyms":[{"name":"positive regulation of TLR12 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 12 signalling pathway","type":"exact"}],"termid":"GO:0034177"}


id: PBO:0046218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 11","termid":"PBO:0046218"}


id: FYPO:0005439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA/DNA annealing activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA/DNA annealing activity","termid":"FYPO:0005438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased DNA/DNA annealing activity","synonyms":[{"name":"reduced DNA/DNA annealing activity","type":"exact"}],"termid":"FYPO:0005439"}


id: GO:0051143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propanediol, CH3-CHOH-CH2OH, a sweet, colorless, viscous, hygroscopic liquid used as an antifreeze, in brake fluid and as a humectant in cosmetics and personal care items.","definition_xrefs":["PMID:15995211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"propanediol metabolic process","synonyms":[{"name":"1,2-dihydroxypropane metabolic process","type":"exact"},{"name":"1,2-dihydroxypropane metabolism","type":"exact"},{"name":"propanediol metabolism","type":"exact"},{"name":"propylene glycol metabolic process","type":"exact"},{"name":"propylene glycol metabolism","type":"exact"}],"termid":"GO:0051143"}


id: PBO:0045669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 heavy chain 1","termid":"PBO:0045669"}


id: PATO:0002501
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed ventrally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventral orientation","synonyms":[{"name":"ventrally directed","type":"exact"}],"termid":"PATO:0002501"}


id: PBO:0083366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified ORF DIC1/YLR348C","termid":"PBO:0083366"}


id: PATO:0001267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated brown","synonyms":[{"name":"bright brown","type":"related"}],"termid":"PATO:0001267"}


id: PBO:0052762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 54","termid":"PBO:0052762"}


id: PBO:0078476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotropin releasing hormone receptor","termid":"PBO:0078476"}


id: PBO:0065776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamylated RFamide peptide","termid":"PBO:0065776"}


id: FYPO:0005343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased during anaphase B.","definition_xrefs":["PomBase:mah","PMID:19686686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000337","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of mitotic spindle elongation during anaphase B","synonyms":[{"name":"decreased rate of mitotic spindle elongation during anaphase B during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic spindle elongation during mitotic anaphase B","type":"exact"},{"name":"decreased rate of mitotic spindle extension during anaphase B","type":"exact"},{"name":"decreased rate of spindle elongation during anaphase B of mitosis","type":"exact"},{"name":"reduced rate of mitotic spindle elongation during anaphase B","type":"exact"}],"termid":"FYPO:0005343"}


id: GO:0032075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclease activity","termid":"GO:0032069"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclease activity","synonyms":[{"name":"activation of nuclease activity","type":"narrow"},{"name":"nuclease activator","type":"related"},{"name":"stimulation of nuclease activity","type":"narrow"},{"name":"up regulation of nuclease activity","type":"exact"},{"name":"up-regulation of nuclease activity","type":"exact"},{"name":"upregulation of nuclease activity","type":"exact"}],"termid":"GO:0032075"}


id: PBO:0084597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL021C was originally annotated as an independent ORF but due to a sequence change was merged with an adjacent ORF into a single reading frame, designated YJL020C/BBC1","termid":"PBO:0084597"}


id: PR:O13734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgo2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.15","synonyms":[{"name":"Spom972h-sgo2","type":"exact"}],"termid":"PR:O13734"}


id: PATO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000838 absolute auditory ability value (obsolete PATO:0000838)","termid":"PATO:0000838"}


id: GO:1904580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intracellular mRNA localization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21471000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"intracellular mRNA localization","termid":"GO:0008298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular mRNA localization","synonyms":[{"name":"regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"regulation of intracellular mRNA localisation","type":"exact"},{"name":"regulation of intracellular mRNA positioning","type":"narrow"},{"name":"regulation of mRNA localization, intracellular","type":"exact"},{"name":"regulation of mRNA positioning, intracellular","type":"narrow"}],"termid":"GO:1904580"}


id: GO:1990136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linoleate + O2 = (9S,10E,12Z)-9-hydroperoxy-10,12-octadecadienoate.","definition_xrefs":["RHEA:30291","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"linoleate 9S-lipoxygenase activity","secondary_identifiers":["EC:1.13.11.58"],"synonyms":[{"name":"9-lipoxygenase activity","type":"related"},{"name":"9S-lipoxygenase activity","type":"related"},{"name":"linoleate 9-lipoxygenase activity","type":"related"},{"name":"linoleate:oxygen 9S-oxidoreductase activity","type":"exact"}],"termid":"GO:1990136"}


id: GO:1900866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a glycolate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glycolate transport","termid":"GO:1900866"}


id: GO:0015813
data:
  {"annotated_genes":["SJAG_00626","SJAG_00522","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92689],"is_not":false,"summary":null,"term":"GO:0015813"},{"annotations":[94355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[99955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate import","termid":"GO:0051938"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"L-glutamate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0089711"],"synonyms":[{"name":"L-glutamate transport","type":"broad"},{"name":"mitochondrial aspartate/glutamate transport","type":"related"}],"termid":"GO:0015813","terms_by_termid":{"GO:0015813":null,"GO:0090515":null,"GO:0110141":null}}


id: GO:0015535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fucose(out) + H+(out) = fucose(in) + H+(in).","definition_xrefs":["TC:2.A.1.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"fucose transmembrane transporter activity","termid":"GO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"fucose:proton symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-20","RHEA:29023"],"synonyms":[{"name":"fucose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015535"}


id: FYPO:0002493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA 5'-adenosine monophosphate hydrolase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA 5'-adenosine monophosphate hydrolase activity","termid":"FYPO:0002491"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000002"],"is_obsolete":false,"name":"decreased DNA 5'-adenosine monophosphate hydrolase activity","synonyms":[{"name":"reduced DNA 5'-adenosine monophosphate hydrolase activity","type":"exact"}],"termid":"FYPO:0002493"}


id: PR:000050549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe) that has not been phosphorylated at positions equivalent to Ser-3, Ser-24, Ser-31, Thr-55, Thr-64, Ser-67, Ser-97, Ser-136, and Thr-214 of the amino acid sequence represented by UniProtKB:O74398. Example: UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Thr-55/Thr-64/Ser-67/Ser-97/Ser-136/Thr-214, PR:000026291.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:34133210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe)","termid":"PR:000050547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pxl1/UnPhos:(S3,S24,S31,T55,T64,S67,S97,S136,T214)","pombase_gene_id":"SPBC4F6.12","synonyms":[{"name":"PomBase_original_PRO_term_name: LIM domain-containing protein C4F6.12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-pxl1/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Thr-55/Thr-64/Ser-67/Ser-97/Ser-136/Thr-214, PR:000026291","type":"narrow"},{"name":"pxl1/UnPhos:(S3,S24,S31,T55,T64,S67,S97,S136,T214)","type":"exact"}],"termid":"PR:000050549"}


id: GO:0030806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways resulting in the breakdown of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclic nucleotide catabolic process (obsolete GO:0030806)","synonyms":[{"name":"down regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"down-regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"downregulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"inhibition of cyclic nucleotide catabolic process","type":"narrow"},{"name":"negative regulation of cyclic nucleotide breakdown","type":"exact"},{"name":"negative regulation of cyclic nucleotide catabolism","type":"exact"},{"name":"negative regulation of cyclic nucleotide degradation","type":"exact"}],"termid":"GO:0030806"}


id: GO:0099593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of an endocytosed synaptic vesicle with an endosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle to endosome fusion","termid":"GO:0016189"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"endocytosed synaptic vesicle to endosome fusion","termid":"GO:0099593"}


id: PR:O94294
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sog2 gene.","definition_xrefs":["UniProtKB:O94294","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat-containing protein sog2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.09c","synonyms":[{"name":"Spom972h-sog2","type":"exact"}],"termid":"PR:O94294"}


id: FYPO:0007271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear chromatin organization is abnormal, such regions containing transposons (Tf2 elements) are tethered to the centromere to a greater extent than normal.","definition_xrefs":["PMID:23084836","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased Tf body tethering to centromere","synonyms":[{"name":"increased Tf body tethering to centromere during mitotic cell cycle","type":"related"},{"name":"increased Tf body tethering to centromere during vegetative growth","type":"exact"},{"name":"increased Tf2 body tethering to centromere","type":"exact"},{"name":"increased centromere tethering of Tf2 bodies","type":"exact"}],"termid":"FYPO:0007271"}


id: MOD:01919
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to (2S,3S)-3-hydroxyaspartic acid.","definition_xrefs":["ChEBI:138111","RESID:AA0579","ChEBI:10696","PubMed:21177872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxy-L-aspartic acid","termid":"MOD:01926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3S)-3-hydroxyaspartic acid","synonyms":[{"name":"(2S,3S)-2-amino-3-hydroxybutanedioic acid","type":"exact"},{"name":"(2S,3S)-3-hydroxyaspartic acid","type":"exact"},{"name":"(3S)-3-hydroxy-L-aspartic acid","type":"exact"},{"name":"2-amino-3-hydroxysuccinic acid","type":"exact"},{"name":"2-azanyl-3-hydroxybutanedioic acid","type":"exact"},{"name":"3-hydroxyaspartic acid","type":"exact"},{"name":"L-threo-3-hydroxyaspartic acid","type":"exact"},{"name":"L-threo-beta-hydroxyaspartic acid","type":"exact"},{"name":"MOD_RES (3S)-3-hydroxyaspartate","type":"exact"}],"termid":"MOD:01919"}


id: FYPO:0007581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling occurs to a lower extent than normal during anaphase B of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:19736319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septation initiation network signaling","termid":"FYPO:0007569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased septation initiation network signaling during anaphase B","synonyms":[{"name":"decreased SIN signaling during anaphase B","type":"exact"},{"name":"decreased septation initiation network signaling during mitotic anaphase B","type":"exact"},{"name":"decreased septation initiation network signalling during anaphase B","type":"exact"},{"name":"decreased septation initiation signaling during anaphase B","type":"exact"},{"name":"reduced septation initiation network signaling during anaphase B","type":"exact"}],"termid":"FYPO:0007581"}


id: PBO:0085126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; specifically associated with the U3 snoRNA, part of the large ribonucleoprotein complex known as the small subunit (SSU) processome, required for 18S rRNA biogenesis, part of the active pre-rRNA processing complex","termid":"PBO:0085126"}


id: PBO:0036326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal protein Pex11 paralog (predicted)","termid":"PBO:0036326"}


id: PBO:0076445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 1","termid":"PBO:0076445"}


id: PBO:0003590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom40 (predicted)","termid":"PBO:0003590"}


id: GO:0106110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of type B trichothecene vomitoxin, also known as deoxynivalenol, a poisonous substance produced by some species of fungi and predominantly occurs in grains such as wheat, barley and oats.","definition_xrefs":["PMID:19333439","PMID:25680507","PMID:25758923","PMID:8637056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"vomitoxin biosynthetic process","synonyms":[{"name":"DON biosynthetic process","type":"exact"},{"name":"deoxynivalenol biosynthetic process","type":"exact"},{"name":"vomitoxin anabolism","type":"exact"},{"name":"vomitoxin biosynthesis","type":"exact"},{"name":"vomitoxin formation","type":"exact"},{"name":"vomitoxin synthesis","type":"exact"}],"termid":"GO:0106110"}


id: PBO:0003026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetamidase (predicted)","termid":"PBO:0003026"}


id: PBO:0072216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19","termid":"PBO:0072216"}


id: GO:0004618
data:
  {"annotated_genes":["SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99510],"is_not":false,"summary":null,"term":"GO:0004618"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + ATP = 3-phospho-D-glyceroyl phosphate + ADP + H+.","definition_xrefs":["EC:2.7.2.3","RHEA:14801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphoglycerate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70486","KEGG_REACTION:R01512","Reactome:R-HSA-71850","MetaCyc:PHOSGLYPHOS-RXN"],"synonyms":[{"name":"3-PGK","type":"related"},{"name":"3-phosphoglycerate kinase activity","type":"related"},{"name":"3-phosphoglycerate phosphokinase activity","type":"related"},{"name":"3-phosphoglyceric acid kinase activity","type":"related"},{"name":"3-phosphoglyceric acid phosphokinase activity","type":"related"},{"name":"3-phosphoglyceric kinase activity","type":"related"},{"name":"ATP-3-phospho-D-glycerate-1-phosphotransferase activity","type":"related"},{"name":"ATP:3-phospho-D-glycerate 1-phosphotransferase activity","type":"related"},{"name":"ATP:D-3-phosphoglycerate 1-phosphotransferase activity","type":"related"},{"name":"PGK","type":"related"},{"name":"glycerate 3-phosphate kinase activity","type":"related"},{"name":"glycerophosphate kinase activity","type":"related"},{"name":"phosphoglyceric acid kinase activity","type":"related"},{"name":"phosphoglyceric kinase activity","type":"related"},{"name":"phosphoglycerokinase activity","type":"related"}],"termid":"GO:0004618","terms_by_termid":{"GO:0004618":null}}


id: GO:0031412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a gas vesicle. A gas vesicle is a hollow structure made of protein, which usually has the form of a cylindrical tube closed by conical end caps.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gas vesicle organization","synonyms":[{"name":"gas vesicle biosynthesis","type":"narrow"},{"name":"gas vesicle formation","type":"narrow"},{"name":"gas vesicle organisation","type":"exact"},{"name":"gas vesicle organization and biogenesis","type":"related"}],"termid":"GO:0031412"}


id: GO:0030916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the transition of the otic placode into the otic vesicle, a transient embryonic structure formed during development of the vertebrate inner ear.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic vesicle formation","synonyms":[{"name":"otocyst biosynthesis","type":"exact"},{"name":"otocyst formation","type":"exact"}],"termid":"GO:0030916"}


id: PBO:0069612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 889, pseudogene","termid":"PBO:0069612"}


id: PATO:0001523
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which is equal to the quotient of the speed of a sound wave divided by its wavelength.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Sound_wavelength"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wavelength","termid":"PATO:0001242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sound wavelength","termid":"PATO:0001523"}


id: PBO:0043743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2 pseudogene 1","termid":"PBO:0043743"}


id: GO:0099053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains TRIP4 (ASC1) and acts a transcriptional coactivator by interacting with transcription factors such as NF-kappa B. In humans this complex has 4 subunits: TRIP4 + ASCC1-3.","definition_xrefs":["PMID:12077347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"activating signal cointegrator 1 complex","synonyms":[{"name":"ASC-1 complex","type":"exact"}],"termid":"GO:0099053"}


id: GO:0072466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about aspects of cell polarity control is received and converted into a molecular signal, contributing to a cell shape checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in cell shape checkpoint (obsolete GO:0072466)","synonyms":[{"name":"cell shape checkpoint sensor mechanism","type":"related"},{"name":"cell shape checkpoint sensor process","type":"related"},{"name":"sensing involved in cell shape checkpoint","type":"related"}],"termid":"GO:0072466"}


id: PR:O59807
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC550.09 gene.","definition_xrefs":["UniProtKB:O59807","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein pex32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.09","synonyms":[{"name":"Spom972h-SPCC550.09","type":"exact"},{"name":"peroxin-32 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59807"}


id: PBO:0073309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 5","termid":"PBO:0073309"}


id: PBO:0086511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; deletion confers sensitivity to citric acid; predicted protein would include a thiol-disulfide oxidoreductase active site","termid":"PBO:0086511"}


id: PBO:0004771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs23 (predicted)","termid":"PBO:0004771"}


id: SO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of ribosome entry site, specific to Eukaryotic organisms that overlaps part of both 5' UTR and CDS sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome_entry_site","termid":"SO:0000139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kozak_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Kozak_consensus_sequence"],"synonyms":[{"name":"kozak consensus","type":"exact"},{"name":"kozak consensus sequence","type":"exact"},{"name":"kozak sequence","type":"exact"}],"termid":"SO:0001647"}


id: GO:1903532
data:
  {"annotated_genes":["SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secretion by cell.","definition_xrefs":["GOC:pm","GOC:TermGenie","GO_REF:0000058","PMID:12130530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"positively_regulates","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of secretion by cell","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cellular secretion","type":"narrow"},{"name":"activation of secretion by cell","type":"narrow"},{"name":"positive regulation of cellular secretion","type":"exact"},{"name":"up regulation of cellular secretion","type":"exact"},{"name":"up regulation of secretion by cell","type":"exact"},{"name":"up-regulation of cellular secretion","type":"exact"},{"name":"up-regulation of secretion by cell","type":"exact"},{"name":"upregulation of cellular secretion","type":"exact"},{"name":"upregulation of secretion by cell","type":"exact"}],"termid":"GO:1903532","terms_by_termid":{"GO:0045921":null}}


id: PATO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flexibility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"flexible","termid":"PATO:0001544"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased flexibility","synonyms":[{"name":"high flexibility","type":"exact"}],"termid":"PATO:0001776"}


id: PBO:0080570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDFY3 antisense RNA 2","termid":"PBO:0080570"}


id: SO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory promoter element identified in mutation experiments, with consensus sequence: CACGTG. Present in promoters, intergenic regions, coding regions, and introns. They are involved in gene expression responses to light and interact with G-box binding factor and I-box binding factor 1a.","definition_xrefs":["PMID:8571452","SO:ml","PMID:19249238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G_box","synonyms":[{"name":"G-box","type":"exact"},{"name":"GBF binding sequence","type":"exact"}],"termid":"SO:0001980"}


id: PBO:0005631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein (predicted)","termid":"PBO:0005631"}


id: PBO:0078926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 2-2","termid":"PBO:0078926"}


id: GO:0035478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chylomicron, a large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE.","definition_xrefs":["GOC:BHF","PMID:17403372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chylomicron binding","termid":"GO:0035478"}


id: PBO:0070398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAR related orphan receptor C","termid":"PBO:0070398"}


id: PBO:0081250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 22","termid":"PBO:0081250"}


id: GO:1904547
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98509],"is_not":false,"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to glucose starvation.","definition_xrefs":["GOC:TermGenie","PMID:21118717","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to glucose starvation","termid":"GO:0042149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to glucose starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904547","terms_by_termid":{"GO:1904547":null}}


id: GO:0035242
data:
  {"annotated_genes":["SJAG_03548","SJAG_02756"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96542,108774],"is_not":false,"summary":null,"term":"GO:0035242"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the same terminal nitrogen (omega nitrogen) residue that was previously methylated, resulting in asymmetrical peptidyl-N(omega),N(omega)-dimethylated arginine residues.","definition_xrefs":["PMID:14705965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02756":null,"SJAG_03548":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008276","GO:0140096","GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"protein-arginine omega-N asymmetric methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9729283","RHEA:48096","EC:2.1.1.319"],"synonyms":[{"name":"S-adenosyl-L-methionine:[protein]-L-arginine N-methyltransferase ([protein]-Nomega,Nomega-dimethyl-L-arginine-forming)","type":"related"},{"name":"protein arginine omega-N asymmetric methylase activity","type":"exact"},{"name":"protein arginine omega-N asymmetric methyltransferase activity","type":"exact"},{"name":"type I PRMT activity","type":"related"},{"name":"type I protein arginine methyltransferase activity","type":"related"}],"termid":"GO:0035242","terms_by_termid":{"GO:0035242":null}}


id: PBO:0066126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 5","termid":"PBO:0066126"}


id: GO:0010825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of centrosome duplication. Centrosome duplication is the replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome duplication","termid":"GO:0010824"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"centrosome duplication","termid":"GO:0051298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of centrosome duplication","termid":"GO:0010825"}


id: PBO:0049797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperpolarization activated cyclic nucleotide gated potassium channel 3","termid":"PBO:0049797"}


id: PBO:0052821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 87, pseudogene","termid":"PBO:0052821"}


id: PBO:0109367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 4","termid":"PBO:0109367"}


id: PATO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that pertains to the post-translational modification of a protein by the covalent attachment of one or more ubiquitin monomer.","definition_xrefs":["neurolex:http://neurolex.org/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinated","synonyms":[{"name":"Ubiquitylation","type":"related"}],"termid":"PATO:0002216"}


id: GO:0051413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisone stimulus. Cortisone is a natural glucocorticoid steroid hormone that is metabolically convertible to cortisol. Cortisone is synthesized from cholesterol in the cortex of the adrenal gland under the stimulation of adrenocorticotropin hormone (ACTH). The main physiological effect of cortisone is on carbohydrate metabolism; it can stimulate increased glucose release from the liver, increased liver glycogen synthesis, and decreased utilization of glucose by the tissues.","definition_xrefs":["ISBN:0721662544","PMID:11276391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cortisone","synonyms":[{"name":"response to cortisone stimulus","type":"exact"}],"termid":"GO:0051413"}


id: GO:0071440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of an acetyl group to histone H3 at position 14 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K14 acetylation (obsolete GO:0071440)","synonyms":[{"name":"regulation of histone H3 acetylation at K14","type":"exact"},{"name":"regulation of histone H3K14 acetylation","type":"exact"}],"termid":"GO:0071440"}


id: MOD:00448
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminoglucose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated","termid":"MOD:00733"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-acetylaminoglucosylated residue","synonyms":[{"name":"GlcNAcRes","type":"exact"},{"name":"HexNAc","type":"related"}],"termid":"MOD:00448"}


id: PBO:0086093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphotyrosine phosphatase of unknown cellular role; activated by adenine","termid":"PBO:0086093"}


id: PBO:0057413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548o","termid":"PBO:0057413"}


id: PBO:0111945
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP215/Dis1 family","termid":"PBO:0111945"}


id: GO:0070783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A filamentous growth process in which cells remain attached after division and form thread-like filaments that may penetrate into a solid growth medium such as an agar plate, exhibited by unicellular fungi under certain growth conditions.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}


id: PBO:0039163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 6 pseudogene 2","termid":"PBO:0039163"}


id: PBO:0052343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF1C antisense RNA 1","termid":"PBO:0052343"}


id: PBO:0062290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 1","termid":"PBO:0062290"}


id: PBO:0030787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-aseptate","termid":"PBO:0030787"}


id: GO:0046785
data:
  {"annotated_genes":["SJAG_02761","SJAG_02609","SJAG_03835","SJAG_01756","SJAG_02886","SJAG_01215","SJAG_00856","SJAG_03540","SJAG_02737","SJAG_02624","SJAG_07018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114223],"is_not":false,"summary":null,"term":"GO:0046785"},{"annotations":[113040],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[105725,106695,104961],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[102546,113281,96503,96200,113045,97102],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[114736,97103],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The addition of tubulin heterodimers to one or both ends of a microtubule.","definition_xrefs":["GOC:ai","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"},{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0065003","GO:0000226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"microtubule polymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule assembly","type":"exact"},{"name":"microtubule formation","type":"related"}],"termid":"GO:0046785","terms_by_termid":{"GO:0007020":null,"GO:0030954":null,"GO:0046785":null,"GO:0051415":null,"GO:0051417":null}}


id: SO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type I (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, -90 degrees < psi +120 degrees < +40 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_left_handed_type_one","secondary_identifiers":["BS:00206"],"synonyms":[{"name":"asx turn left handed type one","type":"exact"},{"name":"asx_turn_il","type":"related"}],"termid":"SO:0001129"}


id: PR:P22774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A stress-70 protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00704","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.11","secondary_identifiers":["UniProtKB:P22774"],"synonyms":[{"name":"Spom972h-HSPA9","type":"exact"}],"termid":"PR:P22774"}


id: PBO:0074174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 1","termid":"PBO:0074174"}


id: PATO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001130 ratio value (obsolete PATO:0001130)","termid":"PATO:0001130"}


id: PBO:0081794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 724","termid":"PBO:0081794"}


id: PBO:0076494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARS1 divergent transcript","termid":"PBO:0076494"}


id: GO:1990798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a destroyed pancreas.","definition_xrefs":["PMID:1985964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ regeneration","termid":"GO:0031100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas regeneration","termid":"GO:1990798"}


id: PR:O94258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exportin-T that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15952:SF11","OMA:SCHPO03793","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin-T (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.09c","secondary_identifiers":["UniProtKB:O94258"],"synonyms":[{"name":"Spom972h-XPOT","type":"exact"},{"name":"exportin(tRNA) (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA exportin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94258"}


id: PBO:0000675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family (predicted)","termid":"PBO:0000675"}


id: PBO:0004150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair nuclease Rad13","termid":"PBO:0004150"}


id: MOD:02057
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-tryptophan residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-tryptophan residue","synonyms":[{"name":"XlnkTrp","type":"exact"}],"termid":"MOD:02057"}


id: PBO:0024476
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of A Kinase","termid":"PBO:0024476"}


id: PBO:0002163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPR repeats","termid":"PBO:0002163"}


id: MOD:01646
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine removal","termid":"MOD:01646"}


id: PBO:0089543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAD-superfamily hydrolase, subfamily IIA","termid":"PBO:0089543"}


id: GO:0032151
data:
  {"annotated_genes":["SJAG_03374","SJAG_04375","SJAG_00663","SJAG_01277"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94030,96229,97075,100039],"is_not":false,"summary":null,"term":"GO:0032151"}]},"cv_name":"cellular_component","definition":"A heterooligomeric septin complex that acts during mitotic cell division.","definition_xrefs":["PMID:16009555","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin complex","termid":"GO:0031105"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01277":null,"SJAG_03374":null,"SJAG_04375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mitotic septin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032151","terms_by_termid":{"GO:0032151":null}}


id: PBO:0061799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dense fiber of sperm tails 1","termid":"PBO:0061799"}


id: PBO:0060138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melatonin receptor 1B","termid":"PBO:0060138"}


id: PBO:0085214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform; shares redundant functions with Yck2p in morphogenesis, proper septin assembly, endocytic trafficking, and glucose sensing; stabilized by Sod1p binding in the presence of glucose and oxygen, causing glucose repression of respiratory metabolism; involved in the phosphorylation and regulation of glucose sensor Rgt2p; YCK1 has a paralog, YCK2, that arose from the whole genome duplication","termid":"PBO:0085214"}


id: PBO:0110417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNCRIP pseudogene 1","termid":"PBO:0110417"}


id: GO:0007401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete pan-neural process (obsolete GO:0007401)","synonyms":[{"name":"pan-neural process","type":"exact"}],"termid":"GO:0007401"}


id: PBO:0111428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo5-like, F-box protein Pof6","termid":"PBO:0111428"}


id: PBO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.5","termid":"PBO:0002224"}


id: PBO:0089878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-P subunit","termid":"PBO:0089878"}


id: PBO:0058620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6752","termid":"PBO:0058620"}


id: GO:0106373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-deoxyglucosone + H2O + NAD+ = 2-dehydro-3-deoxy-D-gluconate + 2 H+ + NADH.","definition_xrefs":["PMID:17175089","RHEA:67244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-deoxyglucosone dehydrogenase activity","termid":"GO:0106373"}


id: GO:0045026
data:
  {"annotated_genes":["SJAG_00870","SJAG_02351","SJAG_02924","SJAG_04887","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88476,91420,97313,106306,92499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032220"}]},"cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane that surround a cell with that of another cell, producing a single cell.","definition_xrefs":["GOC:elh","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00870":null,"SJAG_02351":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane fusion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006947"],"synonyms":[{"name":"cell fusion","type":"broad"},{"name":"cell-cell fusion","type":"broad"}],"termid":"GO:0045026","terms_by_termid":{"GO:0032220":null}}


id: PR:Q9Y7X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-glucose 4-epimerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03313","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 4-epimerase uge1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.14c","secondary_identifiers":["UniProtKB:Q9Y7X5"],"synonyms":[{"name":"Galactowaldenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GALE","type":"exact"}],"termid":"PR:Q9Y7X5"}


id: GO:0003395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration involved in retrograde extension","termid":"GO:0003393"},{"relation_name":"part_of","term_name":"dendrite development by retrograde extension","termid":"GO:0003390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron migration involved in dendrite retrograde extension","termid":"GO:0003395"}


id: PR:Q92358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt1 gene.","definition_xrefs":["UniProtKB:Q92358","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere bouquet protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.13c","synonyms":[{"name":"Spom972h-bqt1","type":"exact"},{"name":"meiotic chromosome segregation protein bqt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic recombination protein rec26 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 23 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92358"}


id: GO:0046227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2,4,5-trichlorophenoxyacetic acid, a chlorinated aromatic compound widely used as a herbicide.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,5-trichlorophenoxyacetic acid biosynthetic process (obsolete GO:0046227)","synonyms":[{"name":"2,4,5-trichlorophenoxyacetic acid anabolism","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid biosynthesis","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid biosynthetic process","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid formation","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid synthesis","type":"exact"}],"termid":"GO:0046227"}


id: SO:0002276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short interspersed elements that originated from 5S rRNAs.","definition_xrefs":["PMID:21673742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SINE_element","termid":"SO:0000206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5S_SINE_retrotransposon","synonyms":[{"name":"5S SINE element","type":"exact"},{"name":"5S SINE retrotransposon","type":"exact"},{"name":"RSS retrotransposon","type":"exact"}],"termid":"SO:0002276"}


id: PBO:0061104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurolysin","termid":"PBO:0061104"}


id: PR:O74914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3101 gene.","definition_xrefs":["UniProtKB:O74914","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3101 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.03c","synonyms":[{"name":"Spom972h-hsp3101","type":"exact"},{"name":"glyoxalase 3 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74914"}


id: PBO:0063633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 11","termid":"PBO:0063633"}


id: PBO:0017499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane nicotinic acid transmembrane transporter (predicted)","termid":"PBO:0017499"}


id: PBO:0067401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 508, pseudogene","termid":"PBO:0067401"}


id: PBO:0057828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3147","termid":"PBO:0057828"}


id: FYPO:0006154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more pheromone response mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Pheromone response genes are normally transcribed in response to a pheromone stimulus.","definition_xrefs":["PomBase:mah","PMID:22900017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of pheromone response gene mRNA during vegetative growth","synonyms":[{"name":"increased level of pheromone response gene RNA during vegetative growth","type":"exact"},{"name":"increased level of pheromone response gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of pheromone response gene transcripts during vegetative growth","type":"exact"},{"name":"increased pheromone response gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006154"}


id: GO:0030553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"},{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cGMP binding","synonyms":[{"name":"3',5' cGMP binding","type":"exact"},{"name":"3',5'-cGMP binding","type":"exact"},{"name":"cyclic GMP binding","type":"exact"}],"termid":"GO:0030553"}


id: GO:0097304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which signal peptide cleavage leads to formation of a water-soluble protein-lipid complex.","definition_xrefs":["GOC:yaf","GOC:pde","UniPathway:UPA00665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein biosynthetic process","termid":"GO:0042158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"lipoprotein biosynthetic process via signal peptide cleavage","synonyms":[{"name":"lipoprotein biosynthesis (signal peptide cleavage)","type":"exact"}],"termid":"GO:0097304"}


id: FYECO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 1NM-PP1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 1-NM-PP1","synonyms":[{"name":"+ 1NM-PP1","type":"exact"}],"termid":"FYECO:0000223"}


id: PBO:0086870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative spore wall protein; expression increases during sporulation; not an essential gene; YOR214C has a paralog, SPO19, that arose from the whole genome duplication","termid":"PBO:0086870"}


id: PBO:0031451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-perforated_nuclear_envelope","termid":"PBO:0031451"}


id: GO:0031939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of chromatin silencing at telomeres.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chromatin silencing at telomere (obsolete GO:0031939)","synonyms":[{"name":"down regulation of chromatin silencing at telomere","type":"exact"},{"name":"down-regulation of chromatin silencing at telomere","type":"exact"},{"name":"downregulation of chromatin silencing at telomere","type":"exact"},{"name":"inhibition of chromatin silencing at telomere","type":"narrow"},{"name":"negative regulation of heterochromatic silencing at telomere","type":"exact"}],"termid":"GO:0031939"}


id: FYPO:0005977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a soluble protein forms prions, by refolding and assembling into highly ordered, self-propagating detergent- and protease-resistant polymers. Phenotypes associated with prions are inherited in a non-Mendelian manner.","definition_xrefs":["PMID:28191457","PomBase:mah","PMID:24021964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"prion formation","synonyms":[{"name":"prion formation during mitotic cell cycle","type":"related"},{"name":"prion formation during vegetative growth","type":"exact"}],"termid":"FYPO:0005977"}


id: MOD:00481
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:106#C","URL:http://www.appliedbiosystems.com/products/productdetail.cfm?prod_id=153","OMSSA:130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Applied Biosystems cleavable ICAT(TM) heavy","synonyms":[{"name":"Applied Biosystems cleavable ICAT(TM) heavy","type":"related"},{"name":"ICAT-C:13C(9)","type":"related"},{"name":"icatheavy","type":"exact"}],"termid":"MOD:00481"}


id: PBO:0091384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Ca(2+)/H(+) antiporter Gdt2","termid":"PBO:0091384"}


id: GO:0051923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a sulfate group to a molecule.","definition_xrefs":["Wikipedia:Sulfation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfation","synonyms":[{"name":"phase II metabolism","type":"broad"},{"name":"sulfonation","type":"exact"},{"name":"sulfur addition","type":"exact"},{"name":"sulphation","type":"exact"},{"name":"sulphur addition","type":"exact"}],"termid":"GO:0051923"}


id: FYPO:0001683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle assembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"mitotic spindle absent from cell","termid":"FYPO:0002018"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly","termid":"FYPO:0000177"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000337","FYPO:0000631"],"is_obsolete":false,"name":"abolished mitotic spindle assembly","synonyms":[{"name":"abolished mitotic spindle assembly during vegetative growth","type":"exact"},{"name":"abolished spindle assembly during mitotic cell cycle","type":"related"},{"name":"spindle assembly involved in mitosis abolished","type":"exact"}],"termid":"FYPO:0001683"}


id: GO:0015255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of propanediol through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propanediol transmembrane transporter activity","termid":"GO:0015170"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"propanediol channel activity","termid":"GO:0015255"}


id: GO:0006849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pyruvate, 2-oxopropanoate, across a plasma membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate transmembrane transport","termid":"GO:1901475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"plasma membrane pyruvate transport","termid":"GO:0006849"}


id: GO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any complex that mediates dynamic changes in eukaryotic chromatin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin remodeling complex (obsolete GO:0016585)","synonyms":[{"name":"chromatin remodeling complex","type":"exact"},{"name":"chromatin remodelling complex","type":"exact"},{"name":"nucleosome remodeling complex","type":"exact"}],"termid":"GO:0016585"}


id: GO:0061322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a disseminated nephrocyte. A disseminated nephrocyte is an insect renal cell that filters hemolymph and is found at scattered locations in the fat body or other tissues. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["CL:0002524","GOC:19783135","GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocyte differentiation","termid":"GO:0061319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disseminated nephrocyte differentiation","termid":"GO:0061322"}


id: GO:0019719
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Vesicular particles formed from disrupted endoplasmic reticulum and plasma membranes without any adhering ribosomes.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete smooth microsome (obsolete GO:0019719)","synonyms":[{"name":"smooth microsome","type":"exact"}],"termid":"GO:0019719"}


id: PBO:0074837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 31B","termid":"PBO:0074837"}


id: GO:0090200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of release of cytochrome c from mitochondria","termid":"GO:0090199"},{"relation_name":"positively_regulates","term_name":"release of cytochrome c from mitochondria","termid":"GO:0001836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"positive regulation of release of cytochrome c from mitochondria","termid":"GO:0090200"}


id: PBO:0063950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINX1 divergent transcript","termid":"PBO:0063950"}


id: SO:0000590
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The signal recognition particle (SRP) is a universally conserved ribonucleoprotein. It is involved in the co-translational targeting of proteins to membranes. The eukaryotic SRP consists of a 300-nucleotide 7S RNA and six proteins: SRPs 72, 68, 54, 19, 14, and 9. Archaeal SRP consists of a 7S RNA and homologues of the eukaryotic SRP19 and SRP54 proteins. In most eubacteria, the SRP consists of a 4.5S RNA and the Ffh protein (a homologue of the eukaryotic SRP54 protein). Eukaryotic and archaeal 7S RNAs have very similar secondary structures, with eight helical elements. These fold into the Alu and S domains, separated by a long linker region. Eubacterial SRP is generally a simpler structure, with the M domain of Ffh bound to a region of the 4.5S RNA that corresponds to helix 8 of the eukaryotic and archaeal SRP S domain. Some Gram-positive bacteria (e.g. Bacillus subtilis), however, have a larger SRP RNA that also has an Alu domain. The Alu domain is thought to mediate the peptide chain elongation retardation function of the SRP. The universally conserved helix which interacts with the SRP54/Ffh M domain mediates signal sequence recognition. In eukaryotes and archaea, the SRP19-helix 6 complex is thought to be involved in SRP assembly and stabilizes helix 8 for SRP54 binding.","direct_ancestors":[{"relation_name":"derives_from","term_name":"SRP_RNA_primary_transcript","termid":"SO:0000589"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA","synonyms":[{"name":"7S RNA","type":"related"},{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:SRP_RNA","type":"exact"},{"name":"SRP RNA","type":"exact"},{"name":"signal recognition particle RNA","type":"related"}],"termid":"SO:0000590"}


id: PBO:0046392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial PAS domain protein 1","termid":"PBO:0046392"}


id: GO:0060887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the epidermis of the limb over time, from its formation to the mature structure. The limb epidermis is the outer epithelial layer of the limb, it is a complex stratified squamous epithelium.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin epidermis development","termid":"GO:0098773"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis development","termid":"GO:0060887"}


id: FYPO:0005842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a cytoplasmic microtubule is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to microtubule cytoskeleton during mitotic interphase","termid":"FYPO:0003185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to interphase microtubule","secondary_identifiers":["FYPO:0005856"],"synonyms":[{"name":"normal protein localisation to cytoplasmic microtubule during mitotic interphase","type":"exact"},{"name":"normal protein localisation to interphase microtubule","type":"exact"},{"name":"normal protein localization to cytoplasmic microtubule during interphase during vegetative growth","type":"exact"},{"name":"normal protein localization to cytoplasmic microtubule during interphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to cytoplasmic microtubule during mitotic interphase","type":"exact"},{"name":"normal protein localization to interphase cytoplasmic microtubule","type":"exact"},{"name":"normal protein localization to interphase microtubule during mitotic cell cycle","type":"related"},{"name":"normal protein localization to interphase microtubule during vegetative growth","type":"exact"}],"termid":"FYPO:0005842"}


id: FYPO:0005332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-prone translesion synthesis does not occur.","definition_xrefs":["PMID:20453833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-prone translesion synthesis","termid":"FYPO:0003892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000298","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"abolished error-prone translesion synthesis across TT-(6-4)","type":"exact"},{"name":"abolished error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"abolished error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"},{"name":"error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts abolished","type":"exact"}],"termid":"FYPO:0005332"}


id: MOD:02074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-lysine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}


id: FYPO:0000073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caffeine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to caffeine","synonyms":[{"name":"resistance to caffeine during mitotic cell cycle","type":"related"},{"name":"resistance to caffeine during vegetative growth","type":"exact"},{"name":"resistant to caffeine","type":"exact"}],"termid":"FYPO:0000073"}


id: PBO:0078828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 5-1","termid":"PBO:0078828"}


id: PBO:0086434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein, involved in vesicle formation; forms complex with Mst27p; member of DUP240 gene family; binds COPI and COPII vesicles; MST28 has a paralog, MST27, that arose from a segmental duplication","termid":"PBO:0086434"}


id: GO:0005373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transporter of heavy metal ions that utilizes a carrier-mediated process to catalyze uniport, symport or antiport between aqueous phases on either side of a lipid membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion porter activity (obsolete GO:0005373)","synonyms":[{"name":"heavy metal ion porter activity","type":"exact"},{"name":"metal ion transporter","type":"broad"}],"termid":"GO:0005373"}


id: PBO:0046506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 2","termid":"PBO:0046506"}


id: GO:0007573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete age dependent increased protein content (obsolete GO:0007573)","synonyms":[{"name":"age dependent increased protein content","type":"exact"}],"termid":"GO:0007573"}


id: GO:0006963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antibacterial peptide biosynthesis.","definition_xrefs":["PMID:10973475","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antibacterial peptide production","termid":"GO:0002803"},{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002807"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"},{"relation_name":"positively_regulates","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of antibacterial peptide biosynthetic process","synonyms":[{"name":"activation of antibacterial peptide biosynthetic process","type":"narrow"},{"name":"antibacterial peptide induction","type":"exact"},{"name":"antibacterial polypeptide induction","type":"exact"},{"name":"stimulation of antibacterial peptide biosynthetic process","type":"narrow"},{"name":"up regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"up-regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"upregulation of antibacterial peptide biosynthetic process","type":"exact"}],"termid":"GO:0006963"}


id: GO:0034019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: violaxanthin = capsorubin, and antheraxanthin = capsanthin.","definition_xrefs":["EC:5.3.99.8"],"gene_count":0,"genotype_count":0,"name":"obsolete capsanthin/capsorubin synthase activity (obsolete GO:0034019)","synonyms":[{"name":"CCS","type":"related"},{"name":"capsanthin-capsorubin synthase activity","type":"related"},{"name":"capsanthin/capsorubin synthase activity","type":"exact"},{"name":"ketoxanthophyll synthase activity","type":"broad"},{"name":"violaxanthin-capsorubin isomerase (ketone-forming) activity","type":"narrow"}],"termid":"GO:0034019"}


id: GO:0060149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the inactivation of gene expression by a posttranscriptional mechanism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing","termid":"GO:0060147"},{"relation_name":"negatively_regulates","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of post-transcriptional gene silencing","synonyms":[{"name":"negative regulation of posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0060149"}


id: GO:0052500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death in the symbiont, where programmed cell death proceeds by apoptosis. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont apoptosis (obsolete GO:0052500)","synonyms":[{"name":"positive regulation by organism of symbiont apoptosis","type":"exact"},{"name":"positive regulation by organism of symbiont apoptotic programmed cell death","type":"exact"}],"termid":"GO:0052500"}


id: PBO:0003128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein Sbp1","termid":"PBO:0003128"}


id: PBO:0013130
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PseudoUridine Synthase","termid":"PBO:0013130"}


id: PBO:0078447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining P2","termid":"PBO:0078447"}


id: PBO:0092025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S3","termid":"PBO:0092025"}


id: PBO:0066080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 8","termid":"PBO:0066080"}


id: GO:0019798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah","PMID:4371784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"procollagen-proline dioxygenase activity","termid":"GO:0019798"}


id: PBO:0067083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 118, pseudogene","termid":"PBO:0067083"}


id: GO:0006164
data:
  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id: PBO:0080578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR4 pseudogene 2","termid":"PBO:0080578"}


id: PATO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000830 relative visual ability value (obsolete PATO:0000830)","termid":"PATO:0000830"}


id: FYPO:0007516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which DNA occupies a smaller portion of the total nuclear volume than normal. The nuclear volume itself may be normal.","definition_xrefs":["PMID:33153481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal nucleus","termid":"FYPO:0002403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002403"],"is_obsolete":false,"name":"decreased DNA volume","synonyms":[{"name":"decreased DNA volume during mitotic cell cycle","type":"related"},{"name":"decreased DNA volume during vegetative growth","type":"exact"},{"name":"reduced DNA volume","type":"exact"}],"termid":"FYPO:0007516"}


id: PBO:0086144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for normal metabolism of the rRNA primary transcript; nucleolar protein; proposed to be involved in ribosome biogenesis","termid":"PBO:0086144"}


id: PR:O74736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- png2 gene.","definition_xrefs":["UniProtKB:O74736","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein png2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.11c","synonyms":[{"name":"ING1 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-png2","type":"exact"}],"termid":"PR:O74736"}


id: FYPO:0000917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of citrate (Si)-synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal citrate (Si)-synthase activity","synonyms":[{"name":"abnormal citrate synthase activity","type":"broad"}],"termid":"FYPO:0000917"}


id: PATO:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000007 relative activity (obsolete PATO:0000007)","termid":"PATO:0000007"}


id: GO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An extrinsic apoptotic signaling pathway initiated by the binding of the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) to a death receptor on the cell surface.","definition_xrefs":["GOC:PARL","PMID:21785459","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:0036462"}


id: PBO:0068761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 6, pseudogene","termid":"PBO:0068761"}


id: PBO:0083248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by expression profiling and mass spectrometry","termid":"PBO:0083248"}


id: PBO:0068391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 212","termid":"PBO:0068391"}


id: PBO:0055829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 4","termid":"PBO:0055829"}


id: PBO:0057382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ax","termid":"PBO:0057382"}


id: PBO:0003716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Nrf1","termid":"PBO:0003716"}


id: GO:0141113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["PMID:19056682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of non-canonical Wnt signaling pathway","termid":"GO:2000051"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway, planar cell polarity pathway","termid":"GO:2000095"},{"relation_name":"negatively_regulates","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0141113"}


id: PBO:0005141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Psk1","termid":"PBO:0005141"}


id: FYPO:0000964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing thiabendazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0002060","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on thiabendazole","synonyms":[{"name":"normal cell population growth in presence of thiabendazole","type":"exact"},{"name":"normal cell population growth on TBZ","type":"exact"},{"name":"normal cell population growth on thiabendazole","type":"exact"},{"name":"normal cellular response to thiabendazole","type":"related"},{"name":"normal vegetative cell population growth on thiabendazole","type":"exact"}],"termid":"FYPO:0000964"}


id: PBO:0058450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5089","termid":"PBO:0058450"}


id: GO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a natural killer cell progenitor.","definition_xrefs":["PMID:16551251","PMID:16551264","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell progenitor differentiation","termid":"GO:0002321"}


id: PBO:0053708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 911","termid":"PBO:0053708"}


id: GO:0007276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation and maintenance of gametes in a multicellular organism. A gamete is a haploid reproductive cell.","definition_xrefs":["GOC:mtg_sensu","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"sexual reproduction","termid":"GO:0019953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamete generation","secondary_identifiers":["GO:0009552"],"synonyms":[{"name":"gametogenesis","type":"related"}],"termid":"GO:0007276"}


id: PBO:0044204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 2","termid":"PBO:0044204"}


id: PATO:0002316
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Being separate or discrete from other skeletal elements.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autogenous","synonyms":[{"name":"free","type":"related"}],"termid":"PATO:0002316"}


id: PBO:0074177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 4","termid":"PBO:0074177"}


id: SO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that leads to a change in the location of a termination codon in a transcript but allows the transcript to escape nonsense-mediated decay (NMD). The change in location of a termination codon can be caused by several different types of sequence variants, including stop_gained (SO:0001587), frameshift_variant (SO:0001589), splice_donor_variant (SO:0001575), and splice_acceptor_variant (SO:0001574) types of variants.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD_escaping_variant","synonyms":[{"name":"NMD escaping variant","type":"exact"},{"name":"nonsense-mediated decay escaping variant","type":"exact"}],"termid":"SO:0002320"}


id: GO:1900301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of laminarabiose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of laminarabiose transport (obsolete GO:1900301)","synonyms":[{"name":"down regulation of laminarabiose transport","type":"exact"},{"name":"down-regulation of laminarabiose transport","type":"exact"},{"name":"downregulation of laminarabiose transport","type":"exact"},{"name":"inhibition of laminarabiose transport","type":"narrow"}],"termid":"GO:1900301"}


id: PBO:0048549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G elongation factor mitochondrial 1","termid":"PBO:0048549"}


id: PBO:0034154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-innervates","termid":"PBO:0034154"}


id: GO:0015780
data:
  {"annotated_genes":["SJAG_04697","SJAG_01177","SJAG_00434","SJAG_04162","SJAG_00339","SJAG_01960","SJAG_04406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[59045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015783"},{"annotations":[85141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[84542,111663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[111664,108483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[89225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[108484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[101078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[101079,65747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of nucleotide-sugars into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_00434":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_04162":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nucleotide-sugar transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleotide-sugar transport","type":"related"}],"termid":"GO:0015780","terms_by_termid":{"GO:0015783":null,"GO:0015786":null,"GO:0015790":null,"GO:0036085":null,"GO:0072334":null,"GO:0097624":null,"GO:0120112":null,"GO:1990569":null,"GO:1990570":null}}


id: PBO:0075746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 72 pseudogene 1","termid":"PBO:0075746"}


id: GO:0010707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of globosides that begins with the formation of lactosylceramides, Gal-beta-(1->4)-Glc-beta-(1->1') ceramides, any compound formed by the replacement of the glycosidic C1 hydroxyl group of lactose by a ceramide group.","definition_xrefs":["GOC:tb","GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"globoside biosynthetic process","termid":"GO:0001576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"globoside biosynthetic process via lactosylceramide","synonyms":[{"name":"biosynthesis of lactosylceramide precursor to globoside","type":"related"},{"name":"globoside biosynthesis via lactosylceramide biosynthesis","type":"exact"},{"name":"lactosylceramide biosynthesis leading to globoside","type":"related"},{"name":"lactosylceramide biosynthetic process leading to globoside","type":"related"}],"termid":"GO:0010707"}


id: PBO:0085813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; exhibits genetic interaction with ERG11 and protein-protein interaction with Hsp82p","termid":"PBO:0085813"}


id: PBO:0085795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; component of the Swr1p complex that incorporates Htz1p into chromatin","termid":"PBO:0085795"}


id: FYPO:0003304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which formation of the mitotic spindle midzone, the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap, is abnormal.","definition_xrefs":["GO:0051256","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly","termid":"FYPO:0000177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic spindle midzone assembly","synonyms":[{"name":"abnormal mitotic spindle midzone assembly during vegetative growth","type":"exact"},{"name":"abnormal spindle midzone assembly during mitotic cell cycle","type":"related"},{"name":"abnormal spindle midzone assembly involved in mitosis","type":"exact"}],"termid":"FYPO:0003304"}


id: PBO:0078585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 59","termid":"PBO:0078585"}


id: PBO:0060487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 9","termid":"PBO:0060487"}


id: PBO:0081408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 256","termid":"PBO:0081408"}


id: GO:0018232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-glutamine and peptidyl-cysteine to form a S-(L-isoglutamyl)-L-cysteine protein cross-link.","definition_xrefs":["RESID:AA0108"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-(L-isoglutamyl)-L-cysteine (obsolete GO:0018232)","termid":"GO:0018232"}


id: PBO:0051638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP3 pseudogene 1","termid":"PBO:0051638"}


id: PBO:0091231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell-surface heme acquisition protein Shu1","termid":"PBO:0091231"}


id: PBO:0060735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4","termid":"PBO:0060735"}


id: FYPO:0009081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of potassium chloride and methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to potassium chloride and methyl methanesulfonate","synonyms":[{"name":"resistance to potassium chloride and MMS","type":"exact"},{"name":"resistance to potassium chloride and MMS during vegetative growth","type":"exact"},{"name":"resistance to potassium chloride and MMS in combination","type":"exact"},{"name":"resistance to potassium chloride and methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to potassium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to potassium chloride and methyl methanesulfonate in combination","type":"exact"},{"name":"resistant to potassium chloride and MMS","type":"exact"},{"name":"resistant to potassium chloride and methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009081"}


id: PBO:0059808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 34","termid":"PBO:0059808"}


id: PBO:0054406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1802","termid":"PBO:0054406"}


id: GO:0009367
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the cleavage of a Gly-Phe bond to release an N-terminal, basic peptide of 5-8 residues from type IV prepilin, and then N-methylates the new N-terminal amino group.","definition_xrefs":["EC:3.4.23.43"],"gene_count":0,"genotype_count":0,"name":"obsolete prepilin peptidase complex (obsolete GO:0009367)","synonyms":[{"name":"prepilin peptidase complex","type":"exact"}],"termid":"GO:0009367"}


id: GO:0015702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chlorate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"chlorate transport","termid":"GO:0015702"}


id: PBO:0057720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-5","termid":"PBO:0057720"}


id: GO:1901274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-dehydro-3-deoxy-D-gluconic acid.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"2-dehydro-3-deoxy-D-gluconic acid metabolic process","termid":"GO:1901272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-gluconic acid biosynthetic process","synonyms":[{"name":"2-dehydro-3-deoxy-D-gluconic acid anabolism","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid biosynthesis","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid formation","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid synthesis","type":"exact"}],"termid":"GO:1901274"}


id: PBO:0059059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1A pseudogene 2","termid":"PBO:0059059"}


id: FYPO:0000428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1 to G0 transition does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G1 to G0 transition","termid":"FYPO:0000427"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abolished entry into G0","synonyms":[{"name":"G1/G0 transition abolished","type":"exact"},{"name":"cell cycle quiescence abolished","type":"related"},{"name":"entry into G0 abolished","type":"exact"},{"name":"establishment of cell quiescence abolished","type":"exact"}],"termid":"FYPO:0000428"}


id: GO:1990593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nascent polypeptide-associated complex, a heterodimeric protein complex that can reversibly bind to ribosomes and is located in direct proximity to newly synthesized polypeptide chains as they emerge from the ribosome.","definition_xrefs":["PMID:25487825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nascent polypeptide-associated complex binding","synonyms":[{"name":"NAC binding","type":"exact"},{"name":"NACA binding","type":"exact"}],"termid":"GO:1990593"}


id: SO:0000527
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_C_cluster","synonyms":[{"name":"V D DJ C cluster","type":"exact"},{"name":"V-D-(DJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000527"}


id: GO:1905215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA binding.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"},{"relation_name":"is_a","term_name":"regulation of RNA binding","termid":"GO:1905214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA binding","synonyms":[{"name":"down regulation of RNA binding","type":"exact"},{"name":"down-regulation of RNA binding","type":"exact"},{"name":"downregulation of RNA binding","type":"exact"},{"name":"inhibition of RNA binding","type":"narrow"}],"termid":"GO:1905215"}


id: GO:0035581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining an extracellular signaling ligand, such that the ligand is unable to bind to its cell surface receptor.","definition_xrefs":["GOC:signaling","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular negative regulation of signal transduction","termid":"GO:1900116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sequestering of extracellular ligand from receptor","synonyms":[{"name":"extracellular sequestering of receptor ligand","type":"exact"},{"name":"negative regulation of protein bioavailability","type":"related"}],"termid":"GO:0035581"}


id: FYPO:0003011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased.","definition_xrefs":["PomBase:mah","PMID:23936074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin during vegetative growth","synonyms":[{"name":"increased protein localisation to chromatin","type":"exact"},{"name":"increased protein localization to chromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003011"}


id: GO:1900503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellulosome assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"cellulosome assembly","termid":"GO:0044575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cellulosome assembly","termid":"GO:1900503"}


id: PBO:0053273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A6","termid":"PBO:0053273"}


id: FYPO:0002874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"premature protein localization to cell division site","termid":"FYPO:0007829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"premature protein localization to medial cortex during vegetative growth","synonyms":[{"name":"advanced protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"faster protein localization to medial cortex during vegetative growth","type":"related"},{"name":"premature protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"premature protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"premature protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0002874"}


id: PBO:0047740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 3C, pseudogene","termid":"PBO:0047740"}


id: PBO:0081328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 123, pseudogene","termid":"PBO:0081328"}


id: PBO:0039791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAF pseudogene 2","termid":"PBO:0039791"}


id: PBO:0059795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 21","termid":"PBO:0059795"}


id: GO:0016002
data:
  {"annotated_genes":["SJAG_05027","SJAG_01693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83948,113570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004783"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + acceptor + 3 H2O = sulfite + reduced acceptor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"assimilatory sulfite reductase activity","type":"exact"},{"name":"assimilatory-type sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:(acceptor) oxidoreductase activity","type":"exact"},{"name":"hydrogen-sulfide:acceptor oxidoreductase activity","type":"exact"},{"name":"sulphite reductase activity","type":"exact"}],"termid":"GO:0016002","terms_by_termid":{"GO:0004783":null}}


id: GO:0006373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete 3'-splice site cleavage, exon ligation (obsolete GO:0006373)","synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"exact"}],"termid":"GO:0006373"}


id: PBO:0058501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692c-1","termid":"PBO:0058501"}


id: PBO:0057647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1243","termid":"PBO:0057647"}


id: PBO:0070017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1314, pseudogene","termid":"PBO:0070017"}


id: PBO:0063842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase alpha pseudogene 1","termid":"PBO:0063842"}


id: PBO:0064903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3CB antisense RNA 1 (head to head)","termid":"PBO:0064903"}


id: PBO:0070128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 42 pseudogene","termid":"PBO:0070128"}


id: PBO:0076366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 3, pseudogene","termid":"PBO:0076366"}


id: MOD:02064
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an D-serine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine (Ser)","termid":"MOD:00202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked D-serine residue","synonyms":[{"name":"XlnkDSer","type":"exact"}],"termid":"MOD:02064"}


id: PBO:0053846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1115","termid":"PBO:0053846"}


id: GO:0034431
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84887],"is_not":false,"summary":null,"term":"GO:0034431"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: P1-P6-bis(5'-adenosyl) hexaphosphate + H2O = AMP + adenosine 5'-pentaphosphate.","definition_xrefs":["PMID:9450008","RHEA:32047","PMID:10085096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"bis(5'-adenosyl)-hexaphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AP(6)A hydrolase activity","type":"exact"},{"name":"AP-6-A hydrolase activity","type":"exact"},{"name":"AP6A hydrolase activity","type":"exact"},{"name":"diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase activity","type":"exact"}],"termid":"GO:0034431","terms_by_termid":{"GO:0034431":null}}


id: GO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Progression from M phase to G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:mah","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete M/G1 transition of mitotic cell cycle (obsolete GO:0000216)","synonyms":[{"name":"M/G1 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0000216"}


id: PBO:0048272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 9","termid":"PBO:0048272"}


id: PBO:0042117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 188B, pseudogene","termid":"PBO:0042117"}


id: GO:1904294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ERAD pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteasomal protein catabolic process","termid":"GO:1901800"},{"relation_name":"is_a","term_name":"regulation of ERAD pathway","termid":"GO:1904292"},{"relation_name":"is_a","term_name":"positive regulation of response to endoplasmic reticulum stress","termid":"GO:1905898"},{"relation_name":"positively_regulates","term_name":"ERAD pathway","termid":"GO:0036503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of ERAD pathway","synonyms":[{"name":"activation of ER-associated degradation pathway","type":"related"},{"name":"activation of ERAD pathway","type":"narrow"},{"name":"activation of endoplasmic reticulum-associated degradation","type":"narrow"},{"name":"activation of endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"positive regulation of ER-associated degradation pathway","type":"related"},{"name":"positive regulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"positive regulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"up regulation of ER-associated degradation pathway","type":"related"},{"name":"up regulation of ERAD pathway","type":"exact"},{"name":"up regulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"up regulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"up-regulation of ER-associated degradation pathway","type":"related"},{"name":"up-regulation of ERAD pathway","type":"exact"},{"name":"up-regulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"up-regulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"upregulation of ER-associated degradation pathway","type":"related"},{"name":"upregulation of ERAD pathway","type":"exact"},{"name":"upregulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"upregulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"}],"termid":"GO:1904294"}


id: GO:1904654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lung alveolus development.","definition_xrefs":["PMID:23962064","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lung alveolus development","termid":"GO:1904653"},{"relation_name":"negatively_regulates","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lung alveolus development","synonyms":[{"name":"down regulation of alveolarization","type":"exact"},{"name":"down regulation of alveologenesis","type":"exact"},{"name":"down regulation of lung alveolus development","type":"exact"},{"name":"down-regulation of alveolarization","type":"exact"},{"name":"down-regulation of alveologenesis","type":"exact"},{"name":"down-regulation of lung alveolus development","type":"exact"},{"name":"downregulation of alveolarization","type":"exact"},{"name":"downregulation of alveologenesis","type":"exact"},{"name":"downregulation of lung alveolus development","type":"exact"},{"name":"inhibition of alveolarization","type":"narrow"},{"name":"inhibition of alveologenesis","type":"narrow"},{"name":"inhibition of lung alveolus development","type":"narrow"},{"name":"negative regulation of alveolarization","type":"exact"},{"name":"negative regulation of alveologenesis","type":"exact"}],"termid":"GO:1904654"}


id: PBO:0062175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily L member 1","termid":"PBO:0062175"}


id: PBO:0081348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 157","termid":"PBO:0081348"}


id: SO:0001330
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_N2_2prime_O_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_N2_2_prime_O_trimethylguanosine","secondary_identifiers":["RNAMOD:035"],"synonyms":[{"name":"N2,N2,2'-O-trimethylguanosine","type":"exact"},{"name":"m22Gmv","type":"exact"}],"termid":"SO:0001330"}


id: PBO:0004307
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of chaperonin-containing T-complex","termid":"PBO:0004307"}


id: GO:0070796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cleistothecium development","termid":"GO:0070796"}


id: PBO:0081842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 776","termid":"PBO:0081842"}


id: PBO:0041234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 68","termid":"PBO:0041234"}


id: PR:Q9USX2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1921.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USX2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1921.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.04c","synonyms":[{"name":"Spom972h-SPBC1921.04c","type":"exact"}],"termid":"PR:Q9USX2"}


id: PBO:0064486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase nu","termid":"PBO:0064486"}


id: FYPO:0008090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic anaphase begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of mitotic anaphase B","termid":"FYPO:0008090"}


id: PBO:0027133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_telomere-nuclear_envelope_distance_during_mitotic_G2_phase","termid":"PBO:0027133"}


id: PBO:0053462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 423","termid":"PBO:0053462"}


id: PBO:0043826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPS1 intronic transcript 1","termid":"PBO:0043826"}


id: PBO:0067507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 647, pseudogene","termid":"PBO:0067507"}


id: PBO:0068304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 8","termid":"PBO:0068304"}


id: PBO:0005413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial heat shock protein Hsp10 (predicted)","termid":"PBO:0005413"}


id: GO:0019422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sulfur compounds with an intermediate oxidation state serve as both electron donors and electron acceptors in an energy-generating redox process. The reaction takes place anaerobically, in light and in the absence of CO2.","definition_xrefs":["MetaCyc:P203-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"disproportionation of elemental sulfur","synonyms":[{"name":"disproportionation of elemental sulphur","type":"exact"}],"termid":"GO:0019422"}


id: PBO:0029817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_abnormal_cell_shape","termid":"PBO:0029817"}


id: PBO:0027975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cysteine-type_peptidase_activity","termid":"PBO:0027975"}


id: PBO:0076520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 30","termid":"PBO:0076520"}


id: PBO:0031103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_osmotic_stress","termid":"PBO:0031103"}


id: PBO:0017838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome regulatory particle, lid subcomplex subunit Rpn15/Dss1","termid":"PBO:0017838"}


id: PBO:0026987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_potassium_ionophore","termid":"PBO:0026987"}


id: PBO:0011404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell,_anatomy,_cellular_component,_biological_process_and_developmental_stage","termid":"PBO:0011404"}


id: GO:1902999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid efflux.","definition_xrefs":["PMID:12042316","GOC:sjp","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid efflux","termid":"GO:1902994"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid transport","termid":"GO:2001139"},{"relation_name":"negatively_regulates","term_name":"phospholipid efflux","termid":"GO:0033700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipid efflux","synonyms":[{"name":"down regulation of phospholipid efflux","type":"exact"},{"name":"down regulation of phospholipid export","type":"exact"},{"name":"down-regulation of phospholipid efflux","type":"exact"},{"name":"down-regulation of phospholipid export","type":"exact"},{"name":"downregulation of phospholipid efflux","type":"exact"},{"name":"downregulation of phospholipid export","type":"exact"},{"name":"inhibition of phospholipid efflux","type":"narrow"},{"name":"inhibition of phospholipid export","type":"narrow"},{"name":"negative regulation of phospholipid export","type":"exact"}],"termid":"GO:1902999"}


id: internal:systematic
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systematic","termid":"internal:systematic"}


id: GO:1904508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to basolateral plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:26115433","GOC:kmv","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein localization to basolateral plasma membrane","termid":"GO:1903361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to basolateral plasma membrane","synonyms":[{"name":"regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"regulation of protein localization in basolateral plasma membrane","type":"exact"}],"termid":"GO:1904508"}


id: GO:0016772
data:
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id: GO:0010863
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id: MOD:00682
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a hydroxylated L-arginine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated arginine","synonyms":[{"name":"HyArg","type":"exact"}],"termid":"MOD:00682"}


id: PBO:0070079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 36, pseudogene","termid":"PBO:0070079"}


id: PBO:0072875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salvador family WW domain containing protein 1","termid":"PBO:0072875"}


id: PBO:0056805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD2 lysolipid transporter B, sphingolipid","termid":"PBO:0056805"}


id: PBO:0038572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABR antisense RNA 1","termid":"PBO:0038572"}


id: PBHQ:004
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_has_qualifier_range","direct_ancestors":[{"relation_name":"is_a","term_name":"has_qualifier_range","termid":"PBHQ:001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to","termid":"PBHQ:004"}


id: FYPO:0000698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased DNA-7-methylguanine glycosylase activity","synonyms":[{"name":"reduced DNA-7-methylguanine glycosylase activity","type":"exact"}],"termid":"FYPO:0000698"}


id: FYPO:0006481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin ssDNA (lagging strand) loading is increased during the mitotic cell cycle. Cohesin ssDNA (lagging strand) loading is the topological linking of a cohesin ring complex to single-stranded DNA, i.e. the lagging strand, in chromatin.","definition_xrefs":["PomBase:mah","GO:0062022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of molecular function","termid":"FYPO:0000682"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"},{"relation_name":"is_a","term_name":"abnormal cohesin loading","termid":"FYPO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"increased mitotic cohesin ssDNA (lagging strand) loading","synonyms":[{"name":"increased cohesin ssDNA (lagging strand) loading during mitotic cell cycle","type":"exact"},{"name":"increased cohesin ssDNA (lagging strand) loading during vegetative growth","type":"exact"},{"name":"increased mitotic cohesin association with ssDNA (lagging strand) chromatin","type":"exact"},{"name":"increased mitotic cohesin localization to ssDNA (lagging strand) chromatin","type":"exact"},{"name":"increased second-DNA capture","type":"exact"}],"termid":"FYPO:0006481"}


id: PBO:0046970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member G","termid":"PBO:0046970"}


id: FYPO:0001260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hypoxia is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to hypoxia","synonyms":[{"name":"normal RNA accumulation during cellular response to hypoxia","type":"related"},{"name":"normal RNA level during cellular response to hyperoxic stress","type":"exact"},{"name":"normal RNA level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to increased oxygen tension","type":"exact"},{"name":"normal mRNA level during cellular response to hypoxia","type":"narrow"},{"name":"normal transcript level during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0001260"}


id: PBO:0060051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 39","termid":"PBO:0060051"}


id: GO:1901148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any gene expression that is involved in extracellular matrix organization. Gene expression includes both transcription to produce an RNA transcript, and the translation of that mRNA into protein. Protein maturation is included in gene expression when required to form an active form of a product from an inactive precursor form.","definition_xrefs":["GOC:pg","GOC:TermGenie","PMID:18668558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"},{"relation_name":"part_of","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"gene expression involved in extracellular matrix organization","synonyms":[{"name":"expression of extracellular matrix proteins","type":"exact"},{"name":"extracellular matrix protein production","type":"related"}],"termid":"GO:1901148"}


id: GO:0031124
data:
  {"annotated_genes":["SJAG_00435","SJAG_02720","SJAG_04427","SJAG_03233","SJAG_02037","SJAG_01599","SJAG_02551","SJAG_03624","SJAG_00448","SJAG_04587","SJAG_00527","SJAG_03126","SJAG_02668","SJAG_02865","SJAG_01175","SJAG_01412","SJAG_04942","SJAG_01791","SJAG_03500","SJAG_04022","SJAG_03853","SJAG_03226","SJAG_00961","SJAG_03594"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88946,94640,105326],"is_not":false,"summary":null,"term":"GO:0031124"},{"annotations":[101085,100804,88945,89589,94271,108068,100841,83811,96420,109683,111398,107405,93324,84561,95216,107679,86772,89567,95745,114291,89050,105929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180010"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an mRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"},{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00435":null,"SJAG_00448":null,"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02551":null,"SJAG_02668":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04427":null,"SJAG_04587":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"mRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA 3' end processing","type":"exact"}],"termid":"GO:0031124","terms_by_termid":{"GO:0031124":null,"GO:0180010":null}}


id: PBO:0085606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in control of DNA replication; binds Rap1p C-terminus, telomeres, centromeres, replication origins; contributes to resection of DNA double strand breaks (DSBs); acts synergistically with Rif2p to help control telomere length and establish telomeric silencing; in addition to controlling DNA replication initiation, plays ongoing role after initiation and controls events at blocked replication forks","termid":"PBO:0085606"}


id: GO:0034094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the association between sister chromatids of a replicated chromosome is maintained during a meiotic cell cycle.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"},{"relation_name":"regulates","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"}


id: PBO:0080687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIZ pseudogene 1","termid":"PBO:0080687"}


id: GO:0010008
data:
  {"annotated_genes":["SJAG_04822","SJAG_05210","SJAG_03250","SJAG_01236","SJAG_00299","SJAG_00638","SJAG_00108","SJAG_00900","SJAG_04489","SJAG_04349","SJAG_01242","SJAG_02429","SJAG_00301","SJAG_02100","SJAG_05207","SJAG_07012","SJAG_01981","SJAG_04936","SJAG_03783","SJAG_04912","SJAG_01112","SJAG_03892","SJAG_04513","SJAG_03511","SJAG_00314","SJAG_02587","SJAG_04024","SJAG_00416","SJAG_04023","SJAG_03347"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60383,85070,94810,98087,98099,103396,106097],"is_not":false,"summary":null,"term":"GO:0010008"},{"annotations":[86722],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010009"},{"annotations":[108564,92024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031901"},{"annotations":[84293,88124],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000813"},{"annotations":[105900,106748,107566],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000814"},{"annotations":[97004,84126,99257,99845,102664,94089],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000815"},{"annotations":[93793,105902,84294,88125,105912,95626,97196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031902"},{"annotations":[90044,88241,115467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"},{"annotations":[94986,108678],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00314":null,"SJAG_00416":null,"SJAG_00638":null,"SJAG_00900":null,"SJAG_01112":null,"SJAG_01236":null,"SJAG_01242":null,"SJAG_01981":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_02587":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03511":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04513":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"endosome membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["NIF_Subcellular:sao978443756"],"synonyms":[{"name":"endosomal membrane","type":"exact"}],"termid":"GO:0010008","terms_by_termid":{"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0010008":null,"GO:0010009":null,"GO:0031901":null,"GO:0031902":null,"GO:0032585":null,"GO:0034424":null}}


id: GO:0006432
data:
  {"annotated_genes":["SJAG_02615","SJAG_02206","SJAG_03626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89752,93345,114115],"is_not":false,"summary":null,"term":"GO:0006432"}]},"cv_name":"biological_process","definition":"The process of coupling phenylalanine to phenylalanyl-tRNA, catalyzed by phenylalanyl-tRNA synthetase. The phenylalanyl-tRNA synthetase is a class-II synthetase. However, unlike other class II enzymes, The activated amino acid is transferred to the 2'-OH group of a phenylalanine-accepting tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02206":null,"SJAG_02615":null,"SJAG_03626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"phenylalanyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006432","terms_by_termid":{"GO:0006432":null}}


id: PBO:0077403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 138","termid":"PBO:0077403"}


id: PBO:0025421
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Salla disease","termid":"PBO:0025421"}


id: GO:0043461
data:
  {"annotated_genes":["SJAG_06135","SJAG_01503","SJAG_01838","SJAG_04899","SJAG_07008","SJAG_04450"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106257],"is_not":false,"summary":null,"term":"GO:0043461"},{"annotations":[112762,85206,92980,105837,96801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033615"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase (also known as F-type ATPase), a two-sector ATPase found in the inner membrane of mitochondria and chloroplasts, and in bacterial plasma membranes.","definition_xrefs":["PMID:29514954","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex assembly","termid":"GO:0070071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01503":null,"SJAG_01838":null,"SJAG_04450":null,"SJAG_04899":null,"SJAG_06135":null,"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"F-type ATPase complex assembly","type":"exact"}],"termid":"GO:0043461","terms_by_termid":{"GO:0033615":null,"GO:0043461":null}}


id: PATO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000177 physiological function (obsolete PATO:0000177)","termid":"PATO:0000177"}


id: PBO:0070678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 49","termid":"PBO:0070678"}


id: GO:0045998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid biosynthetic process","termid":"GO:0007554"},{"relation_name":"is_a","term_name":"positive regulation of ecdysteroid metabolic process","termid":"GO:0045966"},{"relation_name":"is_a","term_name":"positive regulation of steroid hormone biosynthetic process","termid":"GO:0090031"},{"relation_name":"positively_regulates","term_name":"ecdysteroid biosynthetic process","termid":"GO:0045456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of ecdysteroid biosynthetic process","synonyms":[{"name":"activation of ecdysteroid biosynthetic process","type":"narrow"},{"name":"positive regulation of ecdysteroid anabolism","type":"exact"},{"name":"positive regulation of ecdysteroid biosynthesis","type":"exact"},{"name":"positive regulation of ecdysteroid formation","type":"exact"},{"name":"positive regulation of ecdysteroid synthesis","type":"exact"},{"name":"stimulation of ecdysteroid biosynthetic process","type":"narrow"},{"name":"up regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"up-regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"upregulation of ecdysteroid biosynthetic process","type":"exact"}],"termid":"GO:0045998"}


id: PBO:0044510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine like 1","termid":"PBO:0044510"}


id: GO:1900394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of kojic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"kojic acid biosynthetic process","termid":"GO:2001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of kojic acid biosynthetic process","synonyms":[{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"regulation of C6H6O4 anabolism","type":"related"},{"name":"regulation of C6H6O4 biosynthesis","type":"related"},{"name":"regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"regulation of C6H6O4 formation","type":"related"},{"name":"regulation of C6H6O4 synthesis","type":"related"},{"name":"regulation of kojic acid anabolism","type":"exact"},{"name":"regulation of kojic acid biosynthesis","type":"exact"},{"name":"regulation of kojic acid formation","type":"exact"},{"name":"regulation of kojic acid synthesis","type":"exact"}],"termid":"GO:1900394"}


id: PBO:0078391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-6","termid":"PBO:0078391"}


id: PBO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Adg2","termid":"PBO:0002355"}


id: PBO:0056337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 20","termid":"PBO:0056337"}


id: GO:0140648
data:
  {"annotated_genes":["SJAG_03501","SJAG_03486"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112592,114301],"is_not":false,"summary":null,"term":"GO:0140648"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["PMID:22375066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0110044"},{"relation_name":"positively_regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03486":null,"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140648","terms_by_termid":{"GO:0140648":null}}


id: PBO:0053421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 363","termid":"PBO:0053421"}


id: PBO:0028368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GT_microsatellite_DNA_binding","termid":"PBO:0028368"}


id: FYPO:0001159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular pH","synonyms":[{"name":"increased cellular pH during mitotic cell cycle","type":"related"},{"name":"increased cellular pH during vegetative growth","type":"exact"},{"name":"increased cellular pH level","type":"exact"}],"termid":"FYPO:0001159"}


id: PBO:0042023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 81","termid":"PBO:0042023"}


id: PBO:0083003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Amino acid N-acetyltransferase that detoxifies D-amino acids; catalyzes N-acetylation of D-amino acids through ordered bi-bi mechanism in which acetyl-CoA is first substrate bound and CoA is last product liberated; acetylates histones and polyamines, also autoacetylates","termid":"PBO:0083003"}


id: PBO:0069133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 383, pseudogene","termid":"PBO:0069133"}


id: PBO:0065718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA 4","termid":"PBO:0065718"}


id: PBO:0030152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_mercury","termid":"PBO:0030152"}


id: PBO:0073368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTA domain containing 1","termid":"PBO:0073368"}


id: PBO:0013747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 interacting factor Sif3 (predicted)","termid":"PBO:0013747"}


id: PBO:0091347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name descrption, ANKyrin repeats","termid":"PBO:0091347"}


id: PBO:0069913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1205, pseudogene","termid":"PBO:0069913"}


id: PBO:0086569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YOR376W is not an essential gene","termid":"PBO:0086569"}


id: PBO:0066247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 3","termid":"PBO:0066247"}


id: PBO:0055929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A17, pseudogene","termid":"PBO:0055929"}


id: PR:P87058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sla1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.10c","synonyms":[{"name":"La autoantigen homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"La ribonucleoprotein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sla1","type":"exact"}],"termid":"PR:P87058"}


id: PBO:0089898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific microprotein Smp1","termid":"PBO:0089898"}


id: PBO:0070462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 5","termid":"PBO:0070462"}


id: CHEBI:30808
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron trichloride","termid":"CHEBI:30808"}


id: PBO:0079022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 5-1","termid":"PBO:0079022"}


id: PBO:0034353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_postdisplacement_relationship_with","termid":"PBO:0034353"}


id: PBO:0058167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4462","termid":"PBO:0058167"}


id: PBO:0012037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase activity (predicted)","termid":"PBO:0012037"}


id: PBO:0067572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 727, pseudogene","termid":"PBO:0067572"}


id: PBO:0006176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_output","termid":"PBO:0006176"}


id: PBO:0045386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 8","termid":"PBO:0045386"}


id: PBO:0059458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minisatellite binding protein 2","termid":"PBO:0059458"}


id: PBO:0072311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 8","termid":"PBO:0072311"}


id: GO:0050596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + vinorine = H2O + NADP+ + vomilenine.","definition_xrefs":["RHEA:17257","EC:1.14.14.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"vinorine hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R05877","MetaCyc:1.14.13.75-RXN"],"synonyms":[{"name":"vinorine,NADPH:oxygen oxidoreductase (21alpha-hydroxylating)","type":"related"}],"termid":"GO:0050596"}


id: PBO:0004355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication fork protection complex subunit Swi3","termid":"PBO:0004355"}


id: PBO:0055106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2524","termid":"PBO:0055106"}


id: PBO:0049786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 21","termid":"PBO:0049786"}


id: SO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is part of a promoter.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000832 promoter_region (obsolete SO:0000832)","termid":"SO:0000832"}


id: MOD:00244
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form L-cysteine oxazoline-4-carboxylic acid.","definition_xrefs":["RESID:AA0239","PubMed:1880060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine oxazoline-4-carboxylic acid","synonyms":[{"name":"(4S)-2-[(1R)-1-amino-2-sulfanylethyl]-4,5-dihydro-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-sulfanylethyl]-4,5-dihydro-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazoline-4-carboxylic acid (Cys-Ser)","type":"exact"},{"name":"L-cysteine oxazoline-4-carboxylic acid","type":"exact"}],"termid":"MOD:00244"}


id: FYPO:0000242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing ammonia as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on ammonia nitrogen source","synonyms":[{"name":"growth defect, normal growth with ammonia nitrogen source","type":"related"},{"name":"normal cell population growth on ammonia nitrogen source","type":"exact"},{"name":"normal vegetative cell population growth on ammonia nitrogen source","type":"exact"}],"termid":"FYPO:0000242"}


id: PBO:0070257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear 2, pseudogene","termid":"PBO:0070257"}


id: GO:1901649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of actomyosin contractile ring localization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actomyosin contractile ring localization (obsolete GO:1901649)","termid":"GO:1901649"}


id: PBO:0043257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 15","termid":"PBO:0043257"}


id: GO:0030502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of bone mineralization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ossification","termid":"GO:0030279"},{"relation_name":"is_a","term_name":"regulation of bone mineralization","termid":"GO:0030500"},{"relation_name":"is_a","term_name":"negative regulation of biomineral tissue development","termid":"GO:0070168"},{"relation_name":"negatively_regulates","term_name":"bone mineralization","termid":"GO:0030282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone mineralization","synonyms":[{"name":"down regulation of bone mineralization","type":"exact"},{"name":"down-regulation of bone mineralization","type":"exact"},{"name":"downregulation of bone mineralization","type":"exact"},{"name":"inhibition of bone mineralization","type":"narrow"}],"termid":"GO:0030502"}


id: PBO:0073500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small glutamine rich tetratricopeptide repeat co-chaperone alpha","termid":"PBO:0073500"}


id: PBO:0064303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmolipin","termid":"PBO:0064303"}


id: PBO:0067960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 262","termid":"PBO:0067960"}


id: PBO:0057369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ak","termid":"PBO:0057369"}


id: PBO:0070143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 57 pseudogene","termid":"PBO:0070143"}


id: PBO:0001788
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predominantly uniformly single copy (one ot one)","termid":"PBO:0001788"}


id: GO:0071940
data:
  {"annotated_genes":["SJAG_03013","SJAG_04868","SJAG_04238","SJAG_01321","SJAG_00974"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84385,86400,87895,113863,84875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a fungal-type cell wall.","definition_xrefs":["GOC:mah","PMID:19646873","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall organization","termid":"GO:0031505"},{"relation_name":"is_a","term_name":"cell wall assembly","termid":"GO:0070726"},{"relation_name":"part_of","term_name":"fungal-type cell wall biogenesis","termid":"GO:0009272"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_04238":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"fungal-type cell wall assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall formation","type":"related"}],"termid":"GO:0071940","terms_by_termid":{"GO:0030476":null}}


id: FYPO:0007691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange activator is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal DNA strand exchange activator activity","synonyms":[{"name":"normal RecA-family recombinase activator activity","type":"exact"},{"name":"normal positive regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007691"}


id: PBO:0060815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEBL antisense RNA 1","termid":"PBO:0060815"}


id: PBO:0041239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf100 pseudogene 1","termid":"PBO:0041239"}


id: PBO:0043106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity factor 8","termid":"PBO:0043106"}


id: GO:0043724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-keto-3-deoxygalactonate = D-glyceraldehyde + pyruvate.","definition_xrefs":["PMID:12824170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-keto-3-deoxygalactonate aldolase activity","synonyms":[{"name":"KDGal aldolase activity","type":"exact"}],"termid":"GO:0043724"}


id: GO:0002607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"regulates","term_name":"myeloid dendritic cell antigen processing and presentation","termid":"GO:0002469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell antigen processing and presentation","termid":"GO:0002607"}


id: GO:0140993
data:
  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id: GO:0051196
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id: PBO:0113171
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id: GO:0075296
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id: PBO:0063890
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id: PBO:0039217
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id: PBO:0030602
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id: PBO:0066667
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id: GO:0035045
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id: PBO:0083687
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id: GO:0070942
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id: PBO:0038376
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id: PBO:0109358
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id: GO:0061548
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id: PBO:0040740
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