# terms

id: PBO:0060926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor","termid":"PBO:0060926"}


id: PR:Q8WZJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpc31 gene.","definition_xrefs":["UniProtKB:Q8WZJ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.12","synonyms":[{"name":"DNA-directed RNA polymerase III 31 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpc31","type":"exact"}],"termid":"PR:Q8WZJ8"}


id: PBO:0077339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 78","termid":"PBO:0077339"}


id: PBO:0087084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L43B; homologous to mammalian ribosomal protein L37A, no bacterial homolog; RPL43B has a paralog, RPL43A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087084"}


id: GO:0006498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a lipid group to the amino terminus of a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"N-terminal protein lipidation","termid":"GO:0006498"}


id: GO:0070473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"is_a","term_name":"regulation of uterine smooth muscle contraction","termid":"GO:0070472"},{"relation_name":"negatively_regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of uterine smooth muscle contraction","synonyms":[{"name":"down regulation of uterine smooth muscle contraction","type":"exact"},{"name":"down-regulation of uterine smooth muscle contraction","type":"exact"},{"name":"downregulation of uterine smooth muscle contraction","type":"exact"},{"name":"inhibition of uterine smooth muscle contraction","type":"narrow"},{"name":"negative regulation of myometrial contraction","type":"exact"},{"name":"negative regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"negative regulation of myometrium contraction","type":"exact"},{"name":"uterine smooth muscle relaxation","type":"related"}],"termid":"GO:0070473"}


id: FYPO:0004911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutathione into the vacuole does not occur.","definition_xrefs":["GO:0071996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished glutathione import into vacuole","synonyms":[{"name":"abolished glutathione import into vacuole during mitotic cell cycle","type":"related"},{"name":"abolished glutathione import into vacuole during vegetative growth","type":"exact"},{"name":"abolished glutathione transmembrane import into vacuole","type":"exact"},{"name":"glutathione import into vacuole abolished","type":"exact"}],"termid":"FYPO:0004911"}


id: PR:O60155
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prs1 gene.","definition_xrefs":["UniProtKB:O60155","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline--tRNA ligase C19C7.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.06","synonyms":[{"name":"ProRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-prs1","type":"exact"},{"name":"prolyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60155"}


id: MOD:00051
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to N-acetyl-L-aspartic acid.","definition_xrefs":["PubMed:1560020","PubMed:2395459","ChEBI:21547","RESID:AA0042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-aspartic acid","synonyms":[{"name":"(2S)-2-(acetamido)butanedioic acid","type":"exact"},{"name":"2-(acetylamino)butanedioic acid","type":"exact"},{"name":"2-(acetylazanyl)butanedioic acid","type":"exact"},{"name":"AcAsp","type":"exact"},{"name":"MOD_RES N-acetylaspartate","type":"exact"},{"name":"N-acetyl-L-aspartic acid","type":"exact"},{"name":"N-acetylated L-aspartic acid","type":"exact"},{"name":"acetylaspartic acid","type":"exact"}],"termid":"MOD:00051"}


id: PBO:0059662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 28","termid":"PBO:0059662"}


id: PBO:0065218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase associated protein 1","termid":"PBO:0065218"}


id: PBO:0055943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 52","termid":"PBO:0055943"}


id: PBO:0053608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 641","termid":"PBO:0053608"}


id: PBO:0043052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 2","termid":"PBO:0043052"}


id: GO:0032617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The appearance of interleukin-14 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 production (obsolete GO:0032617)","synonyms":[{"name":"IL-14 production","type":"exact"},{"name":"interleukin-14 biosynthetic process","type":"narrow"},{"name":"interleukin-14 secretion","type":"narrow"}],"termid":"GO:0032617"}


id: GO:0030977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to taurine.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate binding","termid":"GO:0043210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"taurine binding","termid":"GO:0030977"}


id: PBO:0046650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial cell adhesion molecule","termid":"PBO:0046650"}


id: PBO:0045797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin 1","termid":"PBO:0045797"}


id: PR:O94681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03607","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.15c","secondary_identifiers":["UniProtKB:O94681"],"synonyms":[{"name":"2-oxoglutarate dehydrogenase complex component E2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OGDC-E2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sucB","type":"exact"},{"name":"dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94681"}


id: GO:0050079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate = propynoate + H2O.","definition_xrefs":["MetaCyc:MALONATE-SEMIALDEHYDE-DEHYDRATASE-RXN","EC:4.2.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetylenecarboxylate hydratase activity, producing 3-oxopropanoate","secondary_identifiers":["RHEA:17957","GO:0047607"],"synonyms":[{"name":"3-oxopropanoate hydro-lyase (propynoate-forming)","type":"related"},{"name":"3-oxopropanoate hydro-lyase activity","type":"related"},{"name":"acetylenecarboxylate hydratase activity","type":"broad"},{"name":"acetylenecarboxylate hydratase activity, producing malonate-semialdehyde","type":"exact"},{"name":"acetylenemonocarboxylate hydrase activity","type":"related"},{"name":"acetylenemonocarboxylate hydratase activity","type":"broad"},{"name":"acetylmonocarboxylic acid hydrase activity","type":"related"},{"name":"alkynoate hydratase activity","type":"broad"},{"name":"malonate-semialdehyde dehydratase activity","type":"exact"}],"termid":"GO:0050079"}


id: PATO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A length quality which is equal to the length of any straight line segment that passes through the center of a circle and whose endpoints are on the circular boundary.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Diameter"],"direct_ancestors":[{"relation_name":"is_a","term_name":"length","termid":"PATO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diameter","termid":"PATO:0001334"}


id: PBO:0046898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 21 member E, pseudogene","termid":"PBO:0046898"}


id: PBO:0028176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_Golgi_membrane","termid":"PBO:0028176"}


id: GO:0019683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyceraldehyde-3-phosphate, an important intermediate in glycolysis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate catabolic process","synonyms":[{"name":"glyceraldehyde 3-phosphate catabolic process","type":"exact"},{"name":"glyceraldehyde 3-phosphate catabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate breakdown","type":"exact"},{"name":"glyceraldehyde-3-phosphate catabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate degradation","type":"exact"}],"termid":"GO:0019683"}


id: PBO:0045401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 3","termid":"PBO:0045401"}


id: PBO:0055731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain 7","termid":"PBO:0055731"}


id: GO:0048505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process controlling the activation and/or rate at which relatively unspecialized cells acquire specialized features. Any process that modulates the rate, frequency or extent of the XXX at a consistent predetermined time point during its development.","definition_xrefs":["GOC:dph","GOC:jid","GOC:tb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of cell differentiation","synonyms":[{"name":"timing of cell differentiation","type":"related"}],"termid":"GO:0048505"}


id: PBO:0048717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLRX5 pseudogene 3","termid":"PBO:0048717"}


id: PBO:0063867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class A","termid":"PBO:0063867"}


id: GO:0052372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent to which it enters into the host organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"regulates","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by symbiont of entry into host","secondary_identifiers":["GO:0052371"],"synonyms":[{"name":"modulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"regulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"regulation by organism of entry into other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0052372"}


id: FYPO:0004399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the protein kinase inhibitor KT5720.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on KT5720","synonyms":[{"name":"normal cell population growth in presence of KT5720","type":"exact"},{"name":"normal cell population growth on KT5720","type":"exact"},{"name":"normal cellular response to KT5720","type":"related"},{"name":"normal vegetative cell population growth on KT5720","type":"exact"}],"termid":"FYPO:0004399"}


id: FYPO:0000058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer mitochondrial nucleoids than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mitochondrial nucleoids present in decreased numbers","synonyms":[{"name":"decreased number of mitochondrial nucleoids","type":"exact"},{"name":"fewer mitochondrial nucleoids present","type":"exact"},{"name":"mitochondrial nucleoid decreased number","type":"exact"},{"name":"mitochondrial nucleoids present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"mitochondrial nucleoids present in decreased numbers during vegetative growth","type":"exact"},{"name":"mitochondrial nucleoids present in reduced numbers","type":"exact"}],"termid":"FYPO:0000058"}


id: PBO:0087202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase; methylates cytosine to m5C at several positions in tRNAs and intron-containing pre-tRNAs; increases proportion of tRNALeu(CAA) with m5C at wobble position in response to hydrogen peroxide, causing selective translation of mRNA from genes enriched in TTG codon; loss of NCL1 confers hypersensitivity to oxidative stress; similar to Nop2p and human proliferation associated nucleolar protein p120","termid":"PBO:0087202"}


id: PR:P87229
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4G3.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4G3.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.03","synonyms":[{"name":"Spom972h-SPCC4G3.03","type":"exact"}],"termid":"PR:P87229"}


id: PBO:0038932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor V1","termid":"PBO:0038932"}


id: PBO:0053437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 382","termid":"PBO:0053437"}


id: PBO:0018035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium ion transmembrane transporter (predicted)","termid":"PBO:0018035"}


id: PBO:0064878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 37","termid":"PBO:0064878"}


id: GO:0032594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein from one location to another within a lipid bilayer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"protein transport within lipid bilayer","synonyms":[{"name":"protein translocation within membrane","type":"exact"},{"name":"receptor translocation within membrane","type":"narrow"},{"name":"receptor transport within lipid bilayer","type":"narrow"}],"termid":"GO:0032594"}


id: SO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of six or seven consecutive residues that contains two H-bonds.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"schellmann_loop","secondary_identifiers":["BS:00226"],"synonyms":[{"name":"paperclip","type":"related"},{"name":"paperclip loop","type":"related"},{"name":"schellmann loop","type":"exact"}],"termid":"SO:0001123"}


id: GO:0102047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + glycine + ATP(4-) = H+ + indole-3-acetyl-glycine + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz","PMID:15659623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetyl-glycine synthetase activity","secondary_identifiers":["MetaCyc:RXN-10429"],"termid":"GO:0102047"}


id: GO:0044549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GTP cyclohydrolase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"GTP cyclohydrolase binding","secondary_identifiers":["GO:0043106"],"synonyms":[{"name":"GTP cyclohydrolase I binding","type":"narrow"}],"termid":"GO:0044549"}


id: FYPO:0000300
data:
  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L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"wcs1delta":{"display_name":"wcs1delta","display_uniquename":"wcs1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02860:allele-1","expression":"Null"}]}]},"wcs2delta":{"display_name":"wcs2delta","display_uniquename":"wcs2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05242:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G 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yeast biological process phenotype","type":"exact"}],"termid":"FYPO:0000300","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000015":null,"FYECO:0000078":null,"FYECO:0000081":null,"FYECO:0000103":null,"FYECO:0000117":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYECO:0000272":null,"FYECO:0000314":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000079":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0000085":null,"FYPO:0000087":null,"FYPO:0000088":null,"FYPO:0000097":null,"FYPO:0000106":null,"FYPO:0000107":null,"FYPO:0000118":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000271":null,"FYPO:0000280":null,"FYPO:0000324":null,"FYPO:0000356":null,"FYPO:0000579":null,"FYPO:0000590":null,"FYPO:0000595":null,"FYPO:0000596":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000644":null,"FYPO:0000671":null,"FYPO:0000674":null,"FYPO:0000714":null,"FYPO:0000726":null,"FYPO:0000729":null,"FYPO:0000731":null,"FYPO:0000760":null,"FYPO:0000815":null,"FYPO:0000841":null,"FYPO:0001007":null,"FYPO:0001038":null,"FYPO:0001132":null,"FYPO:0001214":null,"FYPO:0001234":null,"FYPO:0001327":null,"FYPO:0001355":null,"FYPO:0001357":null,"FYPO:0001369":null,"FYPO:0001370":null,"FYPO:0001375":null,"FYPO:0001408":null,"FYPO:0001440":null,"FYPO:0001556":null,"FYPO:0001690":null,"FYPO:0001784":null,"FYPO:0001838":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0002870":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003738":null,"FYPO:0003779":null,"FYPO:0003946":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0004105":null,"FYPO:0004165":null,"FYPO:0004205":null,"FYPO:0004318":null,"FYPO:0004481":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004683":null,"FYPO:0004718":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0005152":null,"FYPO:0005503":null,"FYPO:0005957":null,"FYPO:0006054":null,"FYPO:0006433":null,"FYPO:0006557":null,"FYPO:0006945":null,"FYPO:0006989":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007363":null,"FYPO:0007521":null,"FYPO:0007522":null,"FYPO:0007701":null,"FYPO:0007770":null,"FYPO:0007771":null,"FYPO:0007772":null,"FYPO:0007783":null,"FYPO:0007789":null,"FYPO:0007790":null,"FYPO:0007824":null,"FYPO:0008031":null,"FYPO:0009111":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null,"GO:0000815":null}}


id: GO:1905610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA cap binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:23409027","GOC:bc","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA binding","termid":"GO:1902415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA cap binding","termid":"GO:1905610"}


id: PBO:0067396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 502, pseudogene","termid":"PBO:0067396"}


id: GO:0048781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyanophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"cyanophore differentiation","termid":"GO:0048774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cyanophore differentiation","termid":"GO:0048781"}


id: GO:0140416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function regulator that inhibits the activity of a transcription regulator via direct binding and/or post-translational modification.","definition_xrefs":["PMID:10652346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"transcription regulator inhibitor activity","synonyms":[{"name":"DNA-binding transcription factor inhibitor activity","type":"narrow"}],"termid":"GO:0140416"}


id: PBO:0046940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member B","termid":"PBO:0046940"}


id: PBO:0048550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP dependent ribosome recycling factor mitochondrial 2","termid":"PBO:0048550"}


id: GO:0090045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of deacetylase activity, the catalysis of the hydrolysis of an acetyl group or groups from a substrate molecule.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of deacetylase activity","termid":"GO:0150065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of deacetylase activity","termid":"GO:0090045"}


id: GO:0008139
data:
  {"annotated_genes":["SJAG_02998","SJAG_01013","SJAG_03959","SJAG_00840","SJAG_03299","SJAG_03662","SJAG_03729","SJAG_04411","SJAG_01909","SJAG_00962"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85175,88055,89560,90120,91896,92258,99504,99793,111933,114774],"is_not":false,"summary":null,"term":"GO:0008139"}]},"cv_name":"molecular_function","definition":"Binding to a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00840":null,"SJAG_00962":null,"SJAG_01013":null,"SJAG_01909":null,"SJAG_02998":null,"SJAG_03299":null,"SJAG_03662":null,"SJAG_03729":null,"SJAG_03959":null,"SJAG_04411":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005048"],"is_obsolete":false,"name":"nuclear localization sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NLS binding","type":"exact"},{"name":"nuclear localisation sequence binding","type":"exact"},{"name":"nuclear localization signal binding","type":"exact"}],"termid":"GO:0008139","terms_by_termid":{"GO:0008139":null}}


id: PBO:0028151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spliceosomal_complex_assembly","termid":"PBO:0028151"}


id: SO:0001428
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence assembly derived from expressed sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_assembly","synonyms":[{"name":"expressed sequence assembly","type":"exact"}],"termid":"SO:0001428"}


id: PBO:0043251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 10","termid":"PBO:0043251"}


id: PBO:0027324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_present_in_normal_numbers","termid":"PBO:0027324"}


id: GO:1904579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thapsigargin stimulus.","definition_xrefs":["GO_REF:0000071","PMID:23106379","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to thapsigargin (obsolete GO:1904579)","termid":"GO:1904579"}


id: FYPO:0006406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle pole body is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology","termid":"FYPO:0004607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle pole body morphology during meiotic cell cycle","synonyms":[{"name":"abnormal SPB morphology during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006406"}


id: GO:1904194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["PMID:24498161","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte apoptotic process","termid":"GO:1904192"},{"relation_name":"positively_regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholangiocyte apoptotic process","synonyms":[{"name":"activation of cholangiocyte apoptosis","type":"narrow"},{"name":"activation of cholangiocyte apoptotic process","type":"narrow"},{"name":"activation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"activation of epithelial cell of bile duct apoptotic process","type":"narrow"},{"name":"positive regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"positive regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"positive regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"up regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"up regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"up regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"up regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"up-regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"up-regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"up-regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"up-regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"upregulation of cholangiocyte apoptosis","type":"narrow"},{"name":"upregulation of cholangiocyte apoptotic process","type":"exact"},{"name":"upregulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"upregulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904194"}


id: PBO:0071053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 55","termid":"PBO:0071053"}


id: PBO:0085707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in shmoo formation and bipolar bud site selection; localizes to sites of polarized growth in a cell cycle dependent- and Spa2p-dependent manner, interacts with MAPKKs Mkk1p, Mkk2p, and Ste7p; SPH1 has a paralog, SPA2, that arose from the whole genome duplication","termid":"PBO:0085707"}


id: PBO:0004031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor complex subunit Iws1 (predicted)","termid":"PBO:0004031"}


id: PBO:0030380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cadmium","termid":"PBO:0030380"}


id: PBO:0040779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bet1 golgi vesicular membrane trafficking protein","termid":"PBO:0040779"}


id: PBO:0076830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere repeat binding bouquet formation protein 1","termid":"PBO:0076830"}


id: GO:0071727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triacylated bacterial lipopeptide stimulus.","definition_xrefs":["GOC:add","PMID:12077222","PMID:2757794","PMID:12524386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to bacterial lipopeptide","termid":"GO:0071221"},{"relation_name":"is_a","term_name":"response to triacyl bacterial lipopeptide","termid":"GO:0071725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to triacyl bacterial lipopeptide","synonyms":[{"name":"cellular response to triacylated bacterial lipoprotein","type":"exact"}],"termid":"GO:0071727"}


id: GO:0071412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a genistein stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to genistein","termid":"GO:0033595"},{"relation_name":"is_a","term_name":"cellular response to hydroxyisoflavone","termid":"GO:0071413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to genistein","termid":"GO:0071412"}


id: FYECO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ornithine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ornithine","termid":"FYECO:0000086"}


id: PBO:0076027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 24 pseudogene 1","termid":"PBO:0076027"}


id: GO:0048656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the anther wall tapetum. This process pertains to the initial formation of a structure from unspecified parts. The anther wall tapetum is a layer of cells that provides a source of nutrition for the pollen grains as they mature.","definition_xrefs":["GOC:sm","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"stamen formation","termid":"GO:0048455"},{"relation_name":"part_of","term_name":"anther wall tapetum morphogenesis","termid":"GO:0048655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum formation","synonyms":[{"name":"tapetal layer formation","type":"broad"},{"name":"tapetum formation","type":"broad"}],"termid":"GO:0048656"}


id: PBO:0058783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7152","termid":"PBO:0058783"}


id: PBO:0046475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERC2 intronic transcript 1","termid":"PBO:0046475"}


id: PBO:0084594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL012C-A was originally annotated as an independent ORF but due to a sequence change was merged with an adjacent ORF into a single reading frame, designated YJL012C/VTC4","termid":"PBO:0084594"}


id: PBO:0079106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22D1 antisense RNA 1","termid":"PBO:0079106"}


id: GO:0070692
data:
  {"annotated_genes":["SJAG_01149","SJAG_03967","SJAG_02057"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91933,107019,113089],"is_not":false,"summary":null,"term":"GO:0070692"}]},"cv_name":"cellular_component","definition":"A positive transcription elongation factor complex that comprises the CDK kinase CTK1 (in budding yeast), Lsk1 (in fission yeast) (corresponding to the Panther PTHR24056:SF39 family), a cyclin and an additional gamma subunit (corresponding to the InterPRO entry IPR024638).","definition_xrefs":["PMID:16721054","GOC:vw","PMID:19328067","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin/CDK positive transcription elongation factor complex","termid":"GO:0008024"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_02057":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"CTDK-1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal domain kinase I complex","type":"exact"},{"name":"CTDK-I complex","type":"exact"},{"name":"Ctk complex","type":"exact"},{"name":"trimeric positive transcription elongation factor complex b","type":"related"}],"termid":"GO:0070692","terms_by_termid":{"GO:0070692":null}}


id: PBO:0040583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRISC and BRCA1 A complex member 2","termid":"PBO:0040583"}


id: GO:0160134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A protein adaptor activity characterized by the capacity to selectively recognize and interact with RNA molecules in a sequence-specific manner. Entities possessing this activity typically exhibit discerning binding preferences for specific nucleotide sequences within RNA molecules, enabling the identification and engagement of distinct RNA motifs or structural elements. This function is integral to various biological processes, including RNA processing, transport, and regulatory mechanisms, contributing to the specificity and precision of cellular RNA-related activities.","definition_xrefs":["PMID:17036044","PMID:14749727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"protein-RNA sequence-specific adaptor activity","termid":"GO:0160134"}


id: PBO:0073222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 6C","termid":"PBO:0073222"}


id: GO:2000947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amylopectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of starch catabolic process","termid":"GO:2000883"},{"relation_name":"is_a","term_name":"positive regulation of amylopectin metabolic process","termid":"GO:2000944"},{"relation_name":"is_a","term_name":"regulation of amylopectin catabolic process","termid":"GO:2000945"},{"relation_name":"positively_regulates","term_name":"amylopectin catabolic process","termid":"GO:2000897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0005975"],"is_obsolete":false,"name":"positive regulation of amylopectin catabolic process","synonyms":[{"name":"positive regulation of Amylopectin catabolism","type":"exact"}],"termid":"GO:2000947"}


id: PR:O14126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 6A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01437","PRO:DNx","PANTHER:PTHR23073:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 6A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.12c","secondary_identifiers":["UniProtKB:O14126"],"synonyms":[{"name":"Spom972h-PSMC3","type":"exact"}],"termid":"PR:O14126"}


id: PBO:0003795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog (predicted)","termid":"PBO:0003795"}


id: PBO:0004240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human C17orf28 ortholog 2","termid":"PBO:0004240"}


id: MOD:00964
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine epsilon amino to imine + 12 amu","synonyms":[{"name":"N6-(methylidene)-lysine","type":"exact"}],"termid":"MOD:00964"}


id: PR:Q7LL15
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sus1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LL15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription and mRNA export factor sus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.12c","synonyms":[{"name":"Spom972h-sus1","type":"exact"}],"termid":"PR:Q7LL15"}


id: PBO:0028506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaerobic_cell_population_growth","termid":"PBO:0028506"}


id: PR:O94411
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug55 gene.","definition_xrefs":["UniProtKB:O94411","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic fizzy-related protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.04c","synonyms":[{"name":"Spom972h-mug55","type":"exact"},{"name":"meiotically up-regulated gene 55 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94411"}


id: PBO:0083769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential non-ATPase regulatory subunit of the 26S proteasome lid; similar to the p58 subunit of the human 26S proteasome; temperature-sensitive alleles cause metaphase arrest, suggesting a role for the proteasome in cell cycle control","termid":"PBO:0083769"}


id: GO:0019008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits.","definition_xrefs":["PMID:15709772","GOC:mah","PMID:12571227"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdopterin synthase complex (obsolete GO:0019008)","synonyms":[{"name":"molybdopterin converting factor complex","type":"exact"}],"termid":"GO:0019008"}


id: PATO:0000824
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000824 water taste (obsolete PATO:0000824)","termid":"PATO:0000824"}


id: GO:0072081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules arranged along the proximal/distal axis of the nephron acquire their identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segment specification","termid":"GO:0007379"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"part_of","term_name":"nephron tubule formation","termid":"GO:0072079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of nephron tubule identity","termid":"GO:0072081"}


id: FYPO:0006910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing vanoxerine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on vanoxerine","synonyms":[{"name":"normal cell population growth in presence of vanoxerine","type":"exact"},{"name":"normal cell population growth on vanoxerine","type":"exact"},{"name":"normal cellular response to vanoxerine","type":"related"},{"name":"normal vegetative cell population growth on vanoxerine","type":"exact"}],"termid":"FYPO:0006910"}


id: FYPO:0004046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PomBase:mah","PMID:21931816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"fragmented septum","termid":"FYPO:0004042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"tetranucleate vegetative cell with fragmented septum","synonyms":[{"name":"tetranucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"tetranucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004046"}


id: FYPO:0005857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of antisense RNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total antisense RNA or a specific antisense RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"altered antisense RNA level during vegetative growth","synonyms":[{"name":"abnormal antisense RNA level during vegetative growth","type":"exact"},{"name":"altered antisense RNA level during mitotic cell cycle","type":"related"},{"name":"altered antisense RNA transcript level during vegetative growth","type":"exact"},{"name":"altered cellular antisense RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0005857"}


id: PBO:0089536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP family protein involved in Golgi vesicle transport Coy1","termid":"PBO:0089536"}


id: GO:0099586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"release of sequestered calcium ion into postsynaptic cytosol","termid":"GO:0099586"}


id: PBO:0050629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 4","termid":"PBO:0050629"}


id: PBO:0036375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr10","termid":"PBO:0036375"}


id: PBO:0079693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 1","termid":"PBO:0079693"}


id: PBO:0069618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 895, pseudogene","termid":"PBO:0069618"}


id: PBO:0061276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase organizer 1","termid":"PBO:0061276"}


id: PBO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 27","termid":"PBO:0062043"}


id: PBO:0047086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member E, pseudogene","termid":"PBO:0047086"}


id: PBO:0048200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha4","termid":"PBO:0048200"}


id: FYPO:0002565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation does not occur. All histone methylation may be affected, or methylation of specific sites on specific histones may be abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"},{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone methylation during vegetative growth","synonyms":[{"name":"abolished histone methylation during mitotic cell cycle","type":"related"},{"name":"histone methylation abolished during vegetative growth","type":"exact"},{"name":"histone methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002565"}


id: PBO:0047550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 8","termid":"PBO:0047550"}


id: FYPO:0007442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0006378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to endoplasmic reticulum membrane","synonyms":[{"name":"normal protein localization to ER membrane","type":"exact"},{"name":"normal protein localization to endoplasmic reticulum membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endoplasmic reticulum membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0007442"}


id: PBO:0060045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 33","termid":"PBO:0060045"}


id: GO:0048197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of priming complexes to form a coat on a Golgi membrane. Priming complexes associate laterally and additional coat proteins are recruited from the cytosol to the forming coat. Cargo proteins diffuse into the budding site and become trapped by their interactions with the coat.","definition_xrefs":["GOC:mah","PMID:10219233","GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0065003","GO:0061024","GO:0008150","GO:0016192","GO:0006810","GO:0044085"],"is_obsolete":false,"name":"Golgi membrane coat protein complex assembly","synonyms":[{"name":"Golgi apparatus membrane coat protein complex assembly","type":"exact"},{"name":"Golgi membrane bud coat oligomerisation","type":"narrow"},{"name":"dictyosome membrane binding by cytosolic coat proteins","type":"narrow"},{"name":"dictyosome membrane bud coat oligomerisation","type":"narrow"}],"termid":"GO:0048197"}


id: PBO:0088709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase protein x component, Pdx1","termid":"PBO:0088709"}


id: PBO:0066677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLF pseudogene 1","termid":"PBO:0066677"}


id: PBO:0044251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWC25 spliceosome associated protein homolog","termid":"PBO:0044251"}


id: GO:0051921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 L-glutamine + adenosylcob(III)yrinate a,c-diamide + 4 ATP + 4 H2O = 4 L-glutamate + adenosylcobyrate + 4 ADP + 8 H+ + 4 phosphate.","definition_xrefs":["EC:6.3.5.10","RHEA:23256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"adenosylcobyric acid synthase (glutamine-hydrolyzing) activity","secondary_identifiers":["KEGG_REACTION:R05225","MetaCyc:R345-RXN"],"synonyms":[{"name":"5'-deoxy-5'-adenosylcobyrinic-acid-a,c-diamide:L-glutamine amido-ligase activity","type":"exact"},{"name":"Ado-cobyric acid synthase [glutamine hydrolyzing] activity","type":"exact"},{"name":"CobQ activity","type":"broad"},{"name":"adenosylcobyric acid synthase (glutamine-hydrolysing) activity","type":"exact"},{"name":"adenosylcobyrinic-acid-a,c-diamide:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"cobyric acid synthase activity","type":"related"}],"termid":"GO:0051921"}


id: SO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region about 24-bp upstream of the start point of bacterial transcription units, involved with sigma factor 54.","definition_xrefs":["PMID:18331472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma54_element","termid":"SO:0001672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_24_signal","synonyms":[{"name":"minus 24 signal","type":"related"}],"termid":"SO:0001674"}


id: PBO:0050784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTR2A antisense RNA 1","termid":"PBO:0050784"}


id: GO:0010685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracyclic triterpenoid compounds, terpenoids with six isoprene units and 4 carbon rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tetracyclic triterpenoid metabolic process","synonyms":[{"name":"tetracyclic triterpenoid metabolism","type":"exact"}],"termid":"GO:0010685"}


id: GO:0002057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to guanine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase binding","termid":"GO:0002060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"guanine binding","termid":"GO:0002057"}


id: PBO:0062472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 163 pseudogene","termid":"PBO:0062472"}


id: PBO:0068465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 42, pseudogene","termid":"PBO:0068465"}


id: PR:O59714
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C3B8.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.06","synonyms":[{"name":"Spom972h-SPBC3B8.06","type":"exact"}],"termid":"PR:O59714"}


id: PBO:0058007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3934","termid":"PBO:0058007"}


id: PBO:0003041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine/adenosine deaminase family (predicted)","termid":"PBO:0003041"}


id: GO:0051963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"regulates","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of synapse assembly","synonyms":[{"name":"regulation of synapse biogenesis","type":"exact"},{"name":"regulation of synaptogenesis","type":"exact"}],"termid":"GO:0051963"}


id: GO:0140542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of a piRNA.","definition_xrefs":["PMID:28847004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"piRNA transcription","termid":"GO:0140541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"regulation of piRNA transcription","termid":"GO:0140542"}


id: GO:0075340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of growth or development of symbiont during interaction with host (obsolete GO:0075340)","synonyms":[{"name":"negative regulation of growth or development of symbiont during interaction with host","type":"exact"}],"termid":"GO:0075340"}


id: PBO:0055021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2436","termid":"PBO:0055021"}


id: PBO:0047859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p31)","termid":"PBO:0047859"}


id: GO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfite + 3 1,5-dihydrocoenzyme F420 = hydrogen sulfide + 3 H2O + 3 coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:16048999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase (coenzyme F420) activity","synonyms":[{"name":"coenzyme F420-dependent sulfite reductase activity","type":"exact"},{"name":"coenzyme F420-sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:coenzyme F420 oxidoreductase activity","type":"exact"},{"name":"sulfite:reduced coenzyme F420 reductase activity","type":"exact"}],"termid":"GO:0052806"}


id: FYPO:0004889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the telomere of a chromosome does not occur during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to telomere","termid":"FYPO:0004888"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to telomere during meiotic cell cycle","synonyms":[{"name":"abolished protein localisation to chromosome, telomeric region, during meiotic cell cycle","type":"exact"},{"name":"abolished protein localisation to telomere during meiotic cell cycle","type":"exact"},{"name":"abolished protein localization to chromosome, telomeric region, during meiotic cell cycle","type":"exact"},{"name":"protein absent from telomere during meiotic cell cycle","type":"related"},{"name":"protein localization to telomere abolished during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004889"}


id: PBO:0056042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactotransferrin","termid":"PBO:0056042"}


id: PBO:0076776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDRKH antisense RNA 1","termid":"PBO:0076776"}


id: GO:1901815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of astaxanthin.","definition_xrefs":["MetaCyc:PWY-5288","UniPathway:UPA00387","GOC:TermGenie","GOC:yaf","PMID:16434154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"astaxanthin metabolic process","termid":"GO:1901813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"astaxanthin biosynthetic process","synonyms":[{"name":"astaxanthin anabolism","type":"exact"},{"name":"astaxanthin biosynthesis","type":"exact"},{"name":"astaxanthin formation","type":"exact"},{"name":"astaxanthin synthesis","type":"exact"}],"termid":"GO:1901815"}


id: PBO:0070473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 8","termid":"PBO:0070473"}


id: PBO:0049637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 40","termid":"PBO:0049637"}


id: GO:0016285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal amino acid, preferentially alanine, from a wide range of peptides, amides and arylamides.","definition_xrefs":["EC:3.4.11.14"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosol alanyl aminopeptidase activity (obsolete GO:0016285)","secondary_identifiers":["MetaCyc:3.4.11.14-RXN"],"synonyms":[{"name":"aminopolypeptidase activity","type":"related"},{"name":"arylamidase activity","type":"narrow"},{"name":"cytosol alanyl aminopeptidase activity","type":"exact"},{"name":"cytosol aminopeptidase III activity","type":"narrow"},{"name":"human liver aminopeptidase","type":"narrow"},{"name":"liver aminopeptidase activity","type":"narrow"},{"name":"puromycin-sensitive aminopeptidase activity","type":"narrow"},{"name":"soluble alanyl aminopeptidase activity","type":"related"},{"name":"thiol-activated aminopeptidase activity","type":"related"}],"termid":"GO:0016285"}


id: PBO:0058871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9903","termid":"PBO:0058871"}


id: GO:0034172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 11 signaling pathway","termid":"GO:0034171"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"negative regulation of TLR11 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034172"}


id: GO:1904496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substance P secretion, neurotransmission.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"positive regulation of substance P secretion","termid":"GO:1904460"},{"relation_name":"is_a","term_name":"regulation of substance P secretion, neurotransmission","termid":"GO:1904494"},{"relation_name":"positively_regulates","term_name":"substance P secretion, neurotransmission","termid":"GO:1990793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of substance P secretion, neurotransmission","synonyms":[{"name":"activation of substance P secretion, neurotransmission","type":"narrow"},{"name":"up regulation of substance P secretion, neurotransmission","type":"exact"},{"name":"up-regulation of substance P secretion, neurotransmission","type":"exact"},{"name":"upregulation of substance P secretion, neurotransmission","type":"exact"}],"termid":"GO:1904496"}


id: GO:0047219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-menthol + UDP-D-glucose = (-)-menthyl beta-D-glucoside + H+ + UDP.","definition_xrefs":["EC:2.4.1.127","RHEA:11520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"monoterpenol beta-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02179","MetaCyc:2.4.1.127-RXN"],"synonyms":[{"name":"UDP-glucose:(-)-menthol O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:(-)-menthol O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:monoterpenol glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-monoterpenol glucosyltransferase activity","type":"related"}],"termid":"GO:0047219"}


id: RO:HOM0000044
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homocracy that involves morphologically and phylogenetically disparate structures that are the result of parallel evolution.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homocracy_relationship_with","termid":"RO:HOM0000003"},{"relation_name":"is_a","term_name":"in_parallelism_relationship_with","termid":"RO:HOM0000005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_deep_homology_relationship_with","synonyms":[{"name":"deep genetic homology","type":"exact"},{"name":"deep homologous to","type":"exact"},{"name":"generative homology","type":"related"},{"name":"homoiology","type":"related"}],"termid":"RO:HOM0000044"}


id: PATO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"young","termid":"PATO:0000309"}


id: PBO:0035998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0035998"}


id: PBO:0059353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S16 pseudogene 1","termid":"PBO:0059353"}


id: PBO:0075749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 2","termid":"PBO:0075749"}


id: FYPO:0001351
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115499,115494,115587,115501],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[115600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[115258,115455,115454,115588,115266,115259,115447,115448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[115620,115616,115617,115624,115629,115632],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[115594],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cellular membrane organization is abnormal in the vegetative growth phase of the life cycle. Cellular membrane organization results in the assembly, arrangement of constituent parts, or disassembly of a lipid bilayer membrane, such as the plasma membrane or an organelle membrane.","definition_xrefs":["GO:0061024","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane organization","termid":"FYPO:0001013"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04284":null,"SJAG_04464":null,"SJAG_05207":null},"genotype_count":16,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal membrane organization during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_04464","SJAG_03891","SJAG_01242","SJAG_03940","SJAG_01906","SJAG_01745","SJAG_05207","SJAG_03449","SJAG_03892","SJAG_02763","SJAG_04284"],"single_locus_genotype_uniquenames":["nem2delta","man1delta","nem1delta","vps32delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","nup61delta","alx1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","lem2delta","ned1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta"],"synonyms":[{"name":"abnormal cellular membrane organization during vegetative growth","type":"exact"},{"name":"abnormal membrane organisation during vegetative growth","type":"exact"},{"name":"abnormal membrane organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001351","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0044819
data:
  {"annotated_genes":["SJAG_02026","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105786,87438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"}]},"cv_name":"biological_process","definition":"A cell cycle checkpoint that detects and negatively regulates progression from G1 to S phase as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of G1/S transition of mitotic cell cycle","termid":"GO:2000134"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_02026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044772","GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"mitotic G1/S transition checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic G1/S transition checkpoint","type":"exact"}],"termid":"GO:0044819","terms_by_termid":{"GO:0031571":null}}


id: GO:0003172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the sinoatrial valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial valve development","synonyms":[{"name":"SA valve development","type":"exact"}],"termid":"GO:0003172"}


id: PBO:0031564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_binding","termid":"PBO:0031564"}


id: GO:0005943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A class I phosphatidylinositol 3-kinase complex that possesses 1-phosphatidylinositol-4-phosphate 3-kinase activity; comprises a catalytic class IA phosphoinositide 3-kinase (PI3K) subunit and an associated SH2 domain-containing regulatory subunit that is a member of a family of related proteins often called p85 proteins. Through the interaction with the SH2-containing adaptor subunits, Class IA PI3K catalytic subunits are linked to tyrosine kinase signaling pathways.","definition_xrefs":["PMID:9759495","PMID:9255069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex, class I","termid":"GO:0097651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class IA","secondary_identifiers":["GO:0035030"],"synonyms":[{"name":"1-phosphatidylinositol-4-phosphate 3-kinase, class IA complex","type":"exact"},{"name":"1-phosphatidylinositol-4-phosphate kinase, class IA complex","type":"exact"},{"name":"class IA PI3K complex","type":"exact"},{"name":"phosphoinositide 3-kinase complex, class IA","type":"exact"}],"termid":"GO:0005943"}


id: GO:0034339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a ligand-bound hormone receptor acts in the nucleus to modulate the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah","GO_REF:0000021","GOC:mh"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor (obsolete GO:0034339)","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor","type":"exact"}],"termid":"GO:0034339"}


id: PBO:0091601
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was originally annotated as SPNCRNA.263 on the forward strand, from non-strand specific data","termid":"PBO:0091601"}


id: PATO:0000758
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A balance quality inhering in a bearer by virtue of the bearer's lacking balance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"balance","termid":"PATO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unbalanced","termid":"PATO:0000758"}


id: GO:1902550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any lymphoid lineage cell migration into thymus that is involved in thymus epithelium morphogenesis.","definition_xrefs":["PMID:22342843","GOC:TermGenie","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid lineage cell migration into thymus","termid":"GO:0097535"},{"relation_name":"part_of","term_name":"thymus epithelium morphogenesis","termid":"GO:0097536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphoid lineage cell migration into thymus involved in thymus epithelium morphogenesis","synonyms":[{"name":"lymphoid lineage cell migration into thymus involved in thymic epithelium morphogenesis","type":"exact"},{"name":"lymphoid lineage restricted progenitor cell migration into thymus involved in thymic epithelium morphogenesis","type":"exact"},{"name":"lymphoid lineage restricted progenitor cell migration into thymus involved in thymus epithelium morphogenesis","type":"exact"}],"termid":"GO:1902550"}


id: PBO:0046260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embigin pseudogene 1","termid":"PBO:0046260"}


id: PBO:0080449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 10 like","termid":"PBO:0080449"}


id: GO:0072148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an epithelial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell fate commitment","termid":"GO:0072148"}


id: PBO:0049560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 26","termid":"PBO:0049560"}


id: PR:Q9UUJ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.16","synonyms":[{"name":"Spom972h-rga9","type":"exact"}],"termid":"PR:Q9UUJ3"}


id: PBO:0001143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp2","termid":"PBO:0001143"}


id: PBO:0091396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom6","termid":"PBO:0091396"}


id: PBO:0050758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 20","termid":"PBO:0050758"}


id: GO:0047493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-choline + ceramide = CMP + H+ + sphingomyelin.","definition_xrefs":["EC:2.7.8.3","RHEA:16273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016780","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ceramide cholinephosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R01891","MetaCyc:CERAMIDE-CHOLINEPHOSPHOTRANSFERASE-RXN"],"synonyms":[{"name":"CDP-choline:N-acylsphingosine cholinephosphotransferase activity","type":"related"},{"name":"phosphorylcholine-ceramide transferase activity","type":"related"}],"termid":"GO:0047493"}


id: PBO:0108919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component like 5, pseudogene","termid":"PBO:0108919"}


id: GO:0032564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dATP, deoxyadenosine triphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dATP binding","termid":"GO:0032564"}


id: GO:2000921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arabinoxylan-containing compound catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xylan catabolic process","termid":"GO:2001000"},{"relation_name":"regulates","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of arabinoxylan-containing compound catabolic process","synonyms":[{"name":"regulation of arabinoxylan catabolism","type":"exact"}],"termid":"GO:2000921"}


id: PBO:0065987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Raf-1 proto-oncogene, serine/threonine kinase","termid":"PBO:0065987"}


id: PATO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's affording unobstructed passage or view.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closure","termid":"PATO:0000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"open","termid":"PATO:0000610"}


id: GO:0006704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glucocorticoid biosynthetic process","synonyms":[{"name":"glucocorticoid anabolism","type":"exact"},{"name":"glucocorticoid biosynthesis","type":"exact"},{"name":"glucocorticoid formation","type":"exact"},{"name":"glucocorticoid synthesis","type":"exact"}],"termid":"GO:0006704"}


id: GO:0060516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size of the prostatic bud as it forms.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"is_a","term_name":"prostate gland morphogenetic growth","termid":"GO:0060737"},{"relation_name":"is_a","term_name":"prostate gland epithelium morphogenesis","termid":"GO:0060740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary prostatic bud elongation","synonyms":[{"name":"prostate bud elongation","type":"broad"},{"name":"prostate bud elongation involved in prostate morphogenesis","type":"exact"}],"termid":"GO:0060516"}


id: GO:0140763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed DNA elimination mechanism in which specific sequences, namely, internal eliminated sequences (IES) and breakage eliminated sequences (BES) are removed from the genome. This process is known to occur in ciliates.","definition_xrefs":["PMID:18708581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed DNA elimination","termid":"GO:0031049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"programmed DNA elimination by elimination of internal DNA segments","termid":"GO:0140763"}


id: PBO:0089787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein, G-patch domain, PINX1 family Pxr1","termid":"PBO:0089787"}


id: PBO:0087092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L8A; required for processing of 27SA3 pre-rRNA to 27SB during assembly of large subunit; binds Domain I of 25S, 5.8 S rRNAs; mutation results in decreased amounts of free 60S subunits; RPL8A has paralog RPL8B from whole genome duplication; RPL8A or RPL8B ribosomes not functionally interchangeable; proportions of Rpl8ap, Rpl8bp in 80S ribosome differ in glucose and glycerol; homologous to mammalian ribosomal protein L7A, no bacterial homolog","termid":"PBO:0087092"}


id: PBO:0091688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Itsy-Bitsy Phosphatase","termid":"PBO:0091688"}


id: GO:0062113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an early phagosome.","definition_xrefs":["PMID:18813294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic vesicle lumen","termid":"GO:0097013"},{"relation_name":"part_of","term_name":"early phagosome","termid":"GO:0032009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"early phagosome lumen","synonyms":[{"name":"early phagocytic vesicle lumen","type":"exact"}],"termid":"GO:0062113"}


id: PBO:0061952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 4","termid":"PBO:0061952"}


id: PBO:0001241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Oma1 (predicted)","termid":"PBO:0001241"}


id: PBO:0081830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 764","termid":"PBO:0081830"}


id: GO:0039595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a virus increases the frequency, rate or extent of the breakdown of host messenger RNA (mRNA).","definition_xrefs":["PMID:16477041","PMID:17360652","PMID:22696660","PMID:12163576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host translation","termid":"GO:0039604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated degradation of host mRNA","secondary_identifiers":["VZ:901"],"synonyms":[{"name":"induction by virus of catabolism of host mRNA","type":"exact"},{"name":"induction by virus of host mRNA catabolic process","type":"exact"},{"name":"induction of host mRNA decay","type":"exact"},{"name":"promotion of host mRNA degradation","type":"exact"},{"name":"viral induction of host mRNA decay","type":"exact"},{"name":"virus-mediated mRNA decay","type":"exact"}],"termid":"GO:0039595"}


id: GO:0004533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of RNA to 5'-phosphomonoester oligonucleotides in both 5' to 3' and 3' to 5' directions.","definition_xrefs":["EC:3.1.13.2","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0140098","GO:0016787","GO:0004527","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"exoribonuclease H activity","secondary_identifiers":["MetaCyc:3.1.13.2-RXN"],"synonyms":[{"name":"retroviral reverse transcriptase RNaseH","type":"related"}],"termid":"GO:0004533"}


id: PBO:0059953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 39","termid":"PBO:0059953"}


id: SO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region about 12-bp upstream of the start point of bacterial transcription units, involved with sigma factor 54.","definition_xrefs":["PMID:18331472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma54_element","termid":"SO:0001672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_12_signal","synonyms":[{"name":"minus 12 signal","type":"exact"}],"termid":"SO:0001673"}


id: GO:0071180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch2 (ICN2), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN2 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch2 complex","type":"exact"}],"termid":"GO:0071180"}


id: GO:0050037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-xylose + NADP+ = H+ + L-xylono-1,4-lactone + NADPH.","definition_xrefs":["RHEA:15789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-xylose 1-dehydrogenase activity","secondary_identifiers":["MetaCyc:L-XYLOSE-1-DEHYDROGENASE-RXN","EC:1.1.1.113","KEGG_REACTION:R03586"],"synonyms":[{"name":"L-xylose dehydrogenase activity","type":"related"},{"name":"L-xylose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADPH-xylose reductase activity","type":"related"}],"termid":"GO:0050037"}


id: GO:0042462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve.","definition_xrefs":["ISBN:0192800981","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell development","termid":"GO:0042461"},{"relation_name":"part_of","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye photoreceptor cell development","termid":"GO:0042462"}


id: GO:0045278
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the respiratory chain located in the plasma membrane, containing the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2). Examples of this component are found in bacterial species.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex IV","termid":"GO:0045277"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane respirasome","termid":"GO:0070470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"plasma membrane respiratory chain complex IV","secondary_identifiers":["GO:0045288"],"synonyms":[{"name":"cytochrome c oxidase complex","type":"broad"},{"name":"respiratory chain complex IV","type":"broad"}],"termid":"GO:0045278"}


id: GO:1905960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)pentan-1-one stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:19684855","PMID:3355503","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to differentiation-inducing factor 2","synonyms":[{"name":"response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)pentan-1-one","type":"exact"},{"name":"response to DIF-2","type":"related"},{"name":"response to DIF2","type":"related"}],"termid":"GO:1905960"}


id: MOD:00538
data:
  {"annotated_genes":["SJAG_02592","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115167,115625,115626,115164,115165,115166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"Modified amino acid residues groups into isobaric sets at particular mass resolution cut-offs.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification","termid":"MOD:00000"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification categorized by isobaric sets","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"termid":"MOD:00538","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: GO:0170037
data:
  {"annotated_genes":["SJAG_02484"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the mitochondrion to the cytosol.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02484":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"export from the mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170037","terms_by_termid":{"GO:1990616":null}}


id: PBO:0072236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 11","termid":"PBO:0072236"}


id: FYPO:0006818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at centromere outer repeat regions is decreased.","definition_xrefs":["PMID:30652128","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere outer repeat","termid":"FYPO:0002842"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at centromere outer repeat","synonyms":[{"name":"decreased protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"decreased protein localization to chromatin at centromere otr","type":"exact"},{"name":"decreased protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at pericentric region during vegetative growth","type":"related"},{"name":"decreased protein localization to chromatin at pericentromeric region during vegetative growth","type":"related"},{"name":"reduced protein localization to chromatin at centromere outer repeat","type":"exact"}],"termid":"FYPO:0006818"}


id: MOD:01997
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino or imino hydrogen with a butanoyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanoylated residue","termid":"MOD:01996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-butanoylated residue","synonyms":[{"name":"N-butanoyl","type":"exact"},{"name":"N-butanoylation","type":"exact"},{"name":"N-butyryl","type":"exact"},{"name":"N-butyrylation","type":"exact"},{"name":"NButRes","type":"exact"}],"termid":"MOD:01997"}


id: PBO:0084015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycolytic enzyme phosphoglucose isomerase; catalyzes the interconversion of glucose-6-phosphate and fructose-6-phosphate; required for cell cycle progression and completion of the gluconeogenic events of sporulation","termid":"PBO:0084015"}


id: PBO:0066141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB associated KRAB zinc finger","termid":"PBO:0066141"}


id: PBO:0073330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 6","termid":"PBO:0073330"}


id: RO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"},{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_part_of","termid":"RO:0002216"}


id: PBO:0029223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_trichostatin_A","termid":"PBO:0029223"}


id: GO:0170056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + H+ + NAD(P)H + O2 = 7-dehydrocholesterol + 2 H2O + NAD(P)+.","definition_xrefs":["PMID:31521708","PMID:21632547","RHEA:51644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cholesterol 7-desaturase (NAD(P)H) activity","secondary_identifiers":["MetaCyc:RXN-16379","EC:1.14.19.21"],"synonyms":[{"name":"C-7 cholesterol dehydrogenase","type":"exact"},{"name":"cholesterol 7,8-dehydrogenase","type":"exact"}],"termid":"GO:0170056"}


id: FYPO:0001036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is delaminated, i.e. one or more of its layers peels off.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology during vegetative growth","termid":"FYPO:0000351"},{"relation_name":"is_a","term_name":"delaminated cell wall","termid":"FYPO:0002948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"delaminated cell wall during vegetative growth","synonyms":[{"name":"delaminate cell wall during vegetative growth","type":"exact"},{"name":"delaminated cell wall during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001036"}


id: PBO:0047866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q21.3)","termid":"PBO:0047866"}


id: PBO:0042459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 123","termid":"PBO:0042459"}


id: GO:1903899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the PERK-mediated unfolded protein response.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22013210","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900103"},{"relation_name":"is_a","term_name":"regulation of PERK-mediated unfolded protein response","termid":"GO:1903897"},{"relation_name":"positively_regulates","term_name":"PERK-mediated unfolded protein response","termid":"GO:0036499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of PERK-mediated unfolded protein response","synonyms":[{"name":"activation of PERK branch of UPR","type":"narrow"},{"name":"activation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"activation of PERK-mediated unfolded protein response","type":"narrow"},{"name":"activation of PKR-like ER kinase signal transduction","type":"narrow"},{"name":"activation of UPR signaling by PERK stress sensor","type":"narrow"},{"name":"activation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"narrow"},{"name":"positive regulation of EIF2AK3-mediated unfolded protein response","type":"related"},{"name":"positive regulation of PERK branch of UPR","type":"exact"},{"name":"positive regulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"positive regulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"positive regulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"},{"name":"up regulation of PERK branch of UPR","type":"exact"},{"name":"up regulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up regulation of PERK-mediated unfolded protein response","type":"exact"},{"name":"up regulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"up regulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"up regulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"},{"name":"up-regulation of PERK branch of UPR","type":"exact"},{"name":"up-regulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up-regulation of PERK-mediated unfolded protein response","type":"exact"},{"name":"up-regulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"up-regulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"},{"name":"upregulation of PERK branch of UPR","type":"exact"},{"name":"upregulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"upregulation of PERK-mediated unfolded protein response","type":"exact"},{"name":"upregulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"upregulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"upregulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"}],"termid":"GO:1903899"}


id: PBO:0029362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_centromeric_outer_repeat_transcript_level","termid":"PBO:0029362"}


id: PBO:0060371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myozenin 1","termid":"PBO:0060371"}


id: GO:0035683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a memory T cell from the blood vessels into the surrounding tissue. A memory T cell is a distinctly differentiated long-lived T cell that has the phenotype CD45RO-positive and CD127-positive.","definition_xrefs":["GOC:BHF","CL:0000813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell extravasation","termid":"GO:0072683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory T cell extravasation","synonyms":[{"name":"memory T-cell extravasation","type":"exact"}],"termid":"GO:0035683"}


id: PBO:0090540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal mitochondrial NADH dehydrogenase (ubiquinone) Ndi1","termid":"PBO:0090540"}


id: PBO:0003252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pipecolate oxidase","termid":"PBO:0003252"}


id: FYPO:0007397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of heme into the cell is abolished.","definition_xrefs":["GO:0140420","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished heme import","synonyms":[{"name":"abolished haem import","type":"exact"},{"name":"abolished heme import during mitotic cell cycle","type":"related"},{"name":"abolished heme import during vegetative growth","type":"exact"},{"name":"abolished heme import into cell","type":"exact"},{"name":"heme import abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0007397"}


id: PBO:0073599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHQ1, H/ACA ribonucleoprotein assembly factor pseudogene 1","termid":"PBO:0073599"}


id: GO:0090701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of a plant organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"plant organ formation","termid":"GO:1905393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of plant organ identity","termid":"GO:0090701"}


id: GO:0062086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vein smooth muscle contraction.","definition_xrefs":["PMID:8428203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle contraction","termid":"GO:0003056"},{"relation_name":"regulates","term_name":"vein smooth muscle contraction","termid":"GO:0014826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vein smooth muscle contraction","termid":"GO:0062086"}


id: PBO:0064889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bgamma","termid":"PBO:0064889"}


id: GO:0061909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which autophagosomes, double-membraned vesicles containing cytoplasmic material, fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole. Fusion provides an acidic environment and digestive function to the interior of the autophagosome.","definition_xrefs":["PMID:28077293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006914","GO:0016192","GO:0006810","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"autophagosome-lysosome fusion","synonyms":[{"name":"autophagosome fusion","type":"broad"},{"name":"autophagosome-vacuole fusion","type":"exact"}],"termid":"GO:0061909"}


id: PBO:0014262
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae RAD17","termid":"PBO:0014262"}


id: PBO:0059772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 46","termid":"PBO:0059772"}


id: PBO:0048316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 27","termid":"PBO:0048316"}


id: GO:0031993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Absorbing energy from one or more photons and transferring their energy to another molecule, usually a protein, within the cell.","definition_xrefs":["GOC:mlg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy transducer activity","termid":"GO:0031992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"light transducer activity","termid":"GO:0031993"}


id: PBO:0072562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS related 2","termid":"PBO:0072562"}


id: GO:0010597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of volatile molecules emitted from green plants, such as hexenal, hexenol and hexenyl acetate, from linoleic acid or linolenic acid.","definition_xrefs":["PMID:17163881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoxygenase pathway","termid":"GO:0019372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"green leaf volatile biosynthetic process","termid":"GO:0010597"}


id: GO:0060281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:tb","GOC:dph","PMID:2394318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oogenesis","termid":"GO:1905879"},{"relation_name":"regulates","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oocyte development","termid":"GO:0060281"}


id: PBO:0057040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 132","termid":"PBO:0057040"}


id: GO:0043409
data:
  {"annotated_genes":["SJAG_00975","SJAG_02000","SJAG_05000","SJAG_03263","SJAG_03893","SJAG_02392","SJAG_02013","SJAG_01114","SJAG_03185","SJAG_02233","SJAG_04825","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84379,103241],"is_not":false,"summary":null,"term":"GO:0043409"},{"annotations":[95561,91981,114386,103720,99925,103152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[113172,92105,114387,95563,91165,87788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[103242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00975":null,"SJAG_01114":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03893":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inhibition of MAPK cascade","type":"narrow"},{"name":"inhibition of MAPKKK cascade","type":"narrow"},{"name":"down regulation of MAPK cascade","type":"exact"},{"name":"down regulation of MAPKKK cascade","type":"exact"},{"name":"down-regulation of MAPK cascade","type":"exact"},{"name":"down-regulation of MAPKKK cascade","type":"exact"},{"name":"downregulation of MAPK cascade","type":"exact"},{"name":"downregulation of MAPKKK cascade","type":"exact"},{"name":"negative regulation of MAP kinase cascade","type":"exact"},{"name":"negative regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"negative regulation of MAPKKK cascade","type":"exact"},{"name":"negative regulation of mitogen activated protein kinase cascade","type":"exact"},{"name":"negative regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"}],"termid":"GO:0043409","terms_by_termid":{"GO:0043409":null,"GO:0180040":null,"GO:1903138":null,"GO:1903753":null}}


id: PBO:0071076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 78","termid":"PBO:0071076"}


id: GO:0032589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a neuron projection.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"neuron projection membrane","termid":"GO:0032589"}


id: PBO:0067369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 470, pseudogene","termid":"PBO:0067369"}


id: PBO:0069722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1003, pseudogene","termid":"PBO:0069722"}


id: FYPO:0004146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxine:NADP 4-dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal pyridoxine:NADP 4-dehydrogenase activity","termid":"FYPO:0004145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased pyridoxine:NADP 4-dehydrogenase activity","synonyms":[{"name":"reduced pyridoxine:NADP 4-dehydrogenase activity","type":"exact"}],"termid":"FYPO:0004146"}


id: PBO:0051990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"janus kinase and microtubule interacting protein 2","termid":"PBO:0051990"}


id: GO:0048448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the stamen are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"stamen development","termid":"GO:0048443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen morphogenesis","secondary_identifiers":["GO:0048426"],"termid":"GO:0048448"}


id: SO:1000012
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The transition of cytidine to thymine occurring at a pCpG site as a consequence of the spontaneous deamination of 5'-methylcytidine.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C_to_T_transition","termid":"SO:1000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_to_T_transition_at_pCpG_site","synonyms":[{"name":"C to T transition at pCpG site","type":"exact"}],"termid":"SO:1000012"}


id: PBO:0080669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 21, pseudogene","termid":"PBO:0080669"}


id: GO:0016458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.","definition_xrefs":["GOC:dph","GOC:dos","GOC:jid","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete gene silencing (obsolete GO:0016458)","secondary_identifiers":["Wikipedia:Gene_silencing"],"termid":"GO:0016458"}


id: PBO:0059019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 8","termid":"PBO:0059019"}


id: PBO:0005693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin (predicted)","termid":"PBO:0005693"}


id: GO:0099082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by a neuropeptide.","definition_xrefs":["PMID:19448629","GOC:bf","GOC:dos","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling","termid":"GO:0098917"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by neuropeptide","termid":"GO:0099540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"}


id: GO:1900247
data:
  {"annotated_genes":["SJAG_04756","SJAG_03677","SJAG_00579","SJAG_04452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110087,105601,91596,106266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140018"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic translational elongation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"regulates","term_name":"cytoplasmic translational elongation","termid":"GO:0002182"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_03677":null,"SJAG_04452":null,"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of cytoplasmic translational elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1900247","terms_by_termid":{"GO:0140018":null}}


id: PBO:0073660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3-HDAC complex associated factor","termid":"PBO:0073660"}


id: GO:0021625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the oculomotor nerve to attain its fully functional state. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021","ISBN:0838580343","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"oculomotor nerve development","termid":"GO:0021557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve maturation","synonyms":[{"name":"CN III maturation","type":"related"}],"termid":"GO:0021625"}


id: GO:0061553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"ganglion development","termid":"GO:0061548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion maturation","synonyms":[{"name":"ganglia maturation","type":"related"}],"termid":"GO:0061553"}


id: PBO:0004627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm7","termid":"PBO:0004627"}


id: PBO:0053752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 992","termid":"PBO:0053752"}


id: PBO:0017011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR36","termid":"PBO:0017011"}


id: PBO:0091559
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"social distancing gene","termid":"PBO:0091559"}


id: PBO:0038429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 1,4-galactosyltransferase (P blood group)","termid":"PBO:0038429"}


id: PBO:0044920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 6","termid":"PBO:0044920"}


id: PBO:0057798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3120","termid":"PBO:0057798"}


id: GO:2000792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal cell proliferation involved in lung development.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell proliferation","termid":"GO:0002053"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000790"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell proliferation involved in lung development","termid":"GO:0060916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000792"}


id: PBO:0078683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (TTT) 16-1","termid":"PBO:0078683"}


id: PBO:0038921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G3","termid":"PBO:0038921"}


id: GO:1900566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of chanoclavine-I.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete chanoclavine-I biosynthetic process (obsolete GO:1900566)","synonyms":[{"name":"chanoclavine-I anabolism","type":"exact"},{"name":"chanoclavine-I biosynthesis","type":"exact"},{"name":"chanoclavine-I formation","type":"exact"},{"name":"chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900566"}


id: GO:0003197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a cardiac cushion over time, from its initial formation to the mature structure. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion development","termid":"GO:0003197"}


id: PBO:0055228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2654","termid":"PBO:0055228"}


id: PBO:0050351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 54","termid":"PBO:0050351"}


id: GO:0070454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heme biosynthetic process","termid":"GO:0070453"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"negatively_regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"negative regulation of heme biosynthetic process","synonyms":[{"name":"down regulation of heme biosynthetic process","type":"exact"},{"name":"down-regulation of heme biosynthetic process","type":"exact"},{"name":"downregulation of heme biosynthetic process","type":"exact"},{"name":"inhibition of heme biosynthetic process","type":"narrow"},{"name":"negative regulation of haem biosynthetic process","type":"exact"},{"name":"negative regulation of heme anabolism","type":"exact"},{"name":"negative regulation of heme biosynthesis","type":"exact"},{"name":"negative regulation of heme formation","type":"exact"},{"name":"negative regulation of heme synthesis","type":"exact"}],"termid":"GO:0070454"}


id: PBO:0004753
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates mei2","termid":"PBO:0004753"}


id: GO:2000403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of lymphocyte migration","termid":"GO:2000401"},{"relation_name":"positively_regulates","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte migration","termid":"GO:2000403"}


id: GO:0010916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of very-low-density lipoprotein particle clearance. Very-low-density lipoprotein particle clearance is the process in which a very-low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle clearance","termid":"GO:0010915"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein particle clearance","termid":"GO:0010985"},{"relation_name":"negatively_regulates","term_name":"very-low-density lipoprotein particle clearance","termid":"GO:0034447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of very-low-density lipoprotein particle clearance","synonyms":[{"name":"negative regulation of VLDL clearance","type":"exact"},{"name":"negative regulation of VLDL particle clearance","type":"exact"}],"termid":"GO:0010916"}


id: PBO:0072116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 5","termid":"PBO:0072116"}


id: PBO:0058014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3940","termid":"PBO:0058014"}


id: GO:0045850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nurse cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nurse cell apoptotic process","termid":"GO:0045477"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"nurse cell apoptotic process","termid":"GO:0045476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nurse cell apoptotic process","synonyms":[{"name":"activation of nurse cell apoptosis","type":"narrow"},{"name":"positive regulation of nurse cell apoptosis","type":"narrow"},{"name":"stimulation of nurse cell apoptosis","type":"narrow"},{"name":"up regulation of nurse cell apoptosis","type":"exact"},{"name":"up-regulation of nurse cell apoptosis","type":"exact"},{"name":"upregulation of nurse cell apoptosis","type":"exact"}],"termid":"GO:0045850"}


id: FYPO:0004242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic interphase","termid":"FYPO:0003331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic S phase","synonyms":[{"name":"reduced protein kinase activity during mitotic S phase","type":"exact"}],"termid":"FYPO:0004242"}


id: PBO:0086707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; member of the multi-drug and toxin extrusion (MATE) family of the multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily","termid":"PBO:0086707"}


id: GO:0046223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aflatoxin, a fungal metabolite found as a contaminant in moldy grains that induces liver cancer. Aflatoxin induces a G to T transversion at codon 249 of p53, leading to its inactivation. Aflatoxin is converted to a chemical carcinogen by P450.","definition_xrefs":["GOC:ai","PMID:20807200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin catabolic process","termid":"GO:0043387"},{"relation_name":"is_a","term_name":"aflatoxin metabolic process","termid":"GO:0046222"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound catabolic process","termid":"GO:1901377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0098754","GO:0019748"],"is_obsolete":false,"name":"aflatoxin catabolic process","synonyms":[{"name":"aflatoxin breakdown","type":"exact"},{"name":"aflatoxin catabolism","type":"exact"},{"name":"aflatoxin degradation","type":"exact"}],"termid":"GO:0046223"}


id: GO:1904417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xenophagy.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","PMID:21617041","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of xenophagy","termid":"GO:1904415"},{"relation_name":"positively_regulates","term_name":"xenophagy","termid":"GO:0098792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044248"],"is_obsolete":false,"name":"positive regulation of xenophagy","synonyms":[{"name":"activation of xenophagy","type":"narrow"},{"name":"up regulation of xenophagy","type":"exact"},{"name":"up-regulation of xenophagy","type":"exact"},{"name":"upregulation of xenophagy","type":"exact"}],"termid":"GO:1904417"}


id: PBO:0039438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and EF-hand domain containing 1","termid":"PBO:0039438"}


id: PBO:0091221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase Plb4","termid":"PBO:0091221"}


id: GO:0042968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of homoserine, alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"homoserine transport","termid":"GO:0042968"}


id: FYPO:0008016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of phenylalanine into the cell occurs to a lower extent than normal.","definition_xrefs":["PMID:11069779","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased phenylalanine import during vegetative growth","synonyms":[{"name":"decreased L-phenylalanine import across plasma membrane","type":"exact"},{"name":"decreased phenylalanine import across plasma membrane","type":"exact"}],"termid":"FYPO:0008016"}


id: GO:1905397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an activated CD8-positive, alpha-beta T cell.","definition_xrefs":["GO_REF:0000085","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905397"}


id: GO:0045625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 1 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"regulates","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 1 cell differentiation","synonyms":[{"name":"regulation of T-helper 1 cell development","type":"related"}],"termid":"GO:0045625"}


id: GO:0043189
data:
  {"annotated_genes":["SJAG_04793","SJAG_03145","SJAG_03628","SJAG_03792","SJAG_03579","SJAG_03036","SJAG_02385","SJAG_00187","SJAG_00783","SJAG_04355","SJAG_02990","SJAG_03230","SJAG_05282","SJAG_04097","SJAG_01016","SJAG_00349","SJAG_01385"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109258],"is_not":false,"summary":null,"term":"GO:0043189"},{"annotations":[97087,102979,100152,100818,95791,111691,108347,97804,105173,95079,88494,109260,114636,86838,90134,90432,93360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035267"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that catalyzes the acetylation of histones H4 and H2A.","definition_xrefs":["GOC:rb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00187":null,"SJAG_00349":null,"SJAG_00783":null,"SJAG_01016":null,"SJAG_01385":null,"SJAG_02385":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03628":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04355":null,"SJAG_04793":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"H4/H2A histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H4/H2A HAT complex","type":"exact"}],"termid":"GO:0043189","terms_by_termid":{"GO:0035267":null,"GO:0043189":null}}


id: PBO:0064013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 47","termid":"PBO:0064013"}


id: PBO:0076737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 10 like 3, pseudogene","termid":"PBO:0076737"}


id: PBO:0065171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin 1","termid":"PBO:0065171"}


id: GO:0061225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of extraglomerular glomerular mesangium cells in the mesonephros by cell division, resulting in the expansion of their population. Extraglomerular mesangial cells (also known as lacis cells, Goormaghtigh cells) are light-staining cells in the kidney found outside the glomerulus, near the vascular pole and macula densa.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"},{"relation_name":"is_a","term_name":"extraglomerular mesangial cell proliferation","termid":"GO:0072122"},{"relation_name":"part_of","term_name":"mesonephric nephron development","termid":"GO:0061215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric extraglomerular mesangial cell proliferation involved in mesonephros development","synonyms":[{"name":"mesonephric Goormaghtigh proliferation","type":"related"},{"name":"mesonephric lacis cell proliferation","type":"related"}],"termid":"GO:0061225"}


id: GO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a vacuolar membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of vacuolar membrane (obsolete GO:0000306)","synonyms":[{"name":"extrinsic to vacuolar membrane","type":"exact"}],"termid":"GO:0000306"}


id: PATO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's exhibiting a upward bending of its leaves or other plant parts.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyponastic","termid":"PATO:0002329"}


id: GO:0090687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of a meiosis I cell cycle spindle assembly checkpoint.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiosis I spindle assembly checkpoint","termid":"GO:1905326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0140013","GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"activation of meiosis I spindle assembly checkpoint","termid":"GO:0090687"}


id: PR:O60117
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.03 gene.","definition_xrefs":["UniProtKB:O60117","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C16G5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.03","synonyms":[{"name":"Spom972h-SPBC16G5.03","type":"exact"}],"termid":"PR:O60117"}


id: MOD:00447
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a glucuronic acid either through a carboxyl group amide or ester bond, or through C1-glycosylation.","definition_xrefs":["DeltaMass:0","Unimod:54#N-term","PubMed:7398618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glucuronylated residue","synonyms":[{"name":"Glucuronyl","type":"related"},{"name":"N-Glucuronyl (N terminus)","type":"exact"},{"name":"N-glucuronylation","type":"related"}],"termid":"MOD:00447"}


id: GO:1904095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endosperm development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25194028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of endosperm development","termid":"GO:2000014"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"endosperm development","termid":"GO:0009960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endosperm development","synonyms":[{"name":"down regulation of endosperm development","type":"exact"},{"name":"down-regulation of endosperm development","type":"exact"},{"name":"downregulation of endosperm development","type":"exact"},{"name":"inhibition of endosperm development","type":"narrow"}],"termid":"GO:1904095"}


id: GO:1902421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving H2 (dihydrogen).","definition_xrefs":["PMID:20692761","PMID:20395274","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen metabolic process","synonyms":[{"name":"H2 metabolism","type":"exact"},{"name":"dihydrogen metabolism","type":"exact"},{"name":"molecular hydrogen metabolism","type":"exact"}],"termid":"GO:1902421"}


id: PBO:0048500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase 1","termid":"PBO:0048500"}


id: PBO:0075705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 1","termid":"PBO:0075705"}


id: GO:0150017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any dendrite in a dendritic tree that emerges near the basal pole of a neuron (e.g. in bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon), and which is the closest to the cell body of the neuron (the soma).","definition_xrefs":["PMID:1720142","PMID:22683681","PMID:17046728","GOC:aruk","GOC:bc","PMID:16899232","PMID:9214543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal dendrite","termid":"GO:0097441"},{"relation_name":"is_a","term_name":"proximal dendrite","termid":"GO:1990635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal proximal dendrite","termid":"GO:0150017"}


id: PR:Q10112
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18G6.13 gene.","definition_xrefs":["UniProtKB:Q10112","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18G6.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.13","synonyms":[{"name":"Spom972h-SPAC18G6.13","type":"exact"}],"termid":"PR:Q10112"}


id: GO:0090331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of platelet activation","termid":"GO:0010544"},{"relation_name":"is_a","term_name":"negative regulation of homotypic cell-cell adhesion","termid":"GO:0034111"},{"relation_name":"is_a","term_name":"regulation of platelet aggregation","termid":"GO:0090330"},{"relation_name":"negatively_regulates","term_name":"platelet aggregation","termid":"GO:0070527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of platelet aggregation","synonyms":[{"name":"platelet disaggregation","type":"narrow"}],"termid":"GO:0090331"}


id: PBO:0075715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP3 antisense RNA 4","termid":"PBO:0075715"}


id: PBO:0002214
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcript, alternative start","termid":"PBO:0002214"}


id: FYPO:0007693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange activator is decreased.","definition_xrefs":["PMID:33493431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased DNA strand exchange activator activity","synonyms":[{"name":"decreased RecA-family recombinase activator activity","type":"exact"},{"name":"decreased positive regulation of RecA-family recombinase activity","type":"related"},{"name":"reduced DNA strand exchange activator activity","type":"exact"}],"termid":"FYPO:0007693"}


id: GO:0072102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the glomerulus are generated and organized. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus morphogenesis","termid":"GO:0072102"}


id: FYPO:0004894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is decreased during sporulation.","definition_xrefs":["PomBase:mah","PMID:11069657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0002159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased 1,3-beta-D-glucan synthase activity during sporulation","synonyms":[{"name":"reduced 1,3-beta-D-glucan synthase activity during sporulation","type":"exact"}],"termid":"FYPO:0004894"}


id: GO:0060636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0032953"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"negatively_regulates","term_name":"(1->3)-beta-D-glucan biosynthetic process","termid":"GO:0006075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of (1->3)-beta-D-glucan biosynthetic process","synonyms":[{"name":"negative regulation of 1,3-beta-D-glucan biosynthetic process","type":"exact"}],"termid":"GO:0060636"}


id: PBO:0039575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 3","termid":"PBO:0039575"}


id: PBO:0029258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029258"}


id: PBO:0030017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_division_site","termid":"PBO:0030017"}


id: GO:2001086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a laminarabioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete laminarabiose transport (obsolete GO:2001086)","termid":"GO:2001086"}


id: GO:0102686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose(2-) + trans-zeatin = H+ + 9-(alpha-D-glucosyl)-trans-zeatin + UDP(3-).","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-glucose:trans-zeatin 9-N-glucosyltransferase","secondary_identifiers":["MetaCyc:RXN-4722"],"termid":"GO:0102686"}


id: PBO:0068115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 422","termid":"PBO:0068115"}


id: PBO:0004815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Utp20 (predicted)","termid":"PBO:0004815"}


id: PBO:0046021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 2","termid":"PBO:0046021"}


id: PBO:0060806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit V1","termid":"PBO:0060806"}


id: SO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-palindromic sequence found in the promoters of genes whose expression is regulated in response to androgen.","definition_xrefs":["PMID:21796522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen_response_element","synonyms":[{"name":"ARE","type":"exact"},{"name":"androgen response element","type":"exact"}],"termid":"SO:0001853"}


id: PBO:0110339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBLN pseudogene 2","termid":"PBO:0110339"}


id: PBO:0083528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SFL1/YOR140W","termid":"PBO:0083528"}


id: GO:0106106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which heat is generated by increasing metabolism in response to cold ambient temperatures in order to maintain a stable core body temperature.","definition_xrefs":["PMID:27876809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"},{"relation_name":"is_a","term_name":"adaptive thermogenesis","termid":"GO:1990845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cold-induced thermogenesis","synonyms":[{"name":"CIT","type":"related"}],"termid":"GO:0106106"}


id: PBO:0074480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD specific E3 ubiquitin protein ligase 2","termid":"PBO:0074480"}


id: GO:0061810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose without proceeding through a cyclic ADP-ribose intermediate.","definition_xrefs":["GOC:PARL","GOC:pde","GOC:pad","GOC:dph","PMID:11866528"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD glycohydrolase activity (obsolete GO:0061810)","termid":"GO:0061810"}


id: GO:0015838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of betaine, the N-trimethyl derivative of an amino acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transport","termid":"GO:0015697"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"amino-acid betaine transport","synonyms":[{"name":"betaine transport","type":"exact"}],"termid":"GO:0015838"}


id: CHEBI:17677
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP","termid":"CHEBI:17677"}


id: PBO:0085213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform; shares redundant functions with Yck1p in morphogenesis, proper septin assembly, endocytic trafficking, and glucose sensing; stabilized by Sod1p binding in the presence of glucose and oxygen, causing glucose repression of respiratory metabolism; involved in the phosphorylation and regulation of glucose sensor Rgt2p; YCK2 has a paralog, YCK1, that arose from the whole genome duplication","termid":"PBO:0085213"}


id: PBO:0000617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase Rqh1","termid":"PBO:0000617"}


id: GO:1900069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular hyperosmotic salinity response.","definition_xrefs":["PMID:16278455","GOC:dgf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to osmotic stress","termid":"GO:0106049"},{"relation_name":"is_a","term_name":"regulation of response to salt stress","termid":"GO:1901000"},{"relation_name":"regulates","term_name":"cellular hyperosmotic salinity response","termid":"GO:0071475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular hyperosmotic salinity response","synonyms":[{"name":"regulation of cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:1900069"}


id: PBO:0011987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family recombinase Rad51/Rhp51","termid":"PBO:0011987"}


id: PBO:0057394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-2","termid":"PBO:0057394"}


id: GO:0031606
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two outer rings of the cytosolic proteasome core complex.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, alpha-subunit complex","termid":"GO:0019773"},{"relation_name":"part_of","term_name":"cytosolic proteasome core complex","termid":"GO:0031603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"cytosolic proteasome core complex, alpha-subunit complex","termid":"GO:0031606"}


id: PBO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex sigma subunit Aps1","termid":"PBO:0001075"}


id: PBO:0048135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 autosomal homolog 1","termid":"PBO:0048135"}


id: PBO:0041996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 42","termid":"PBO:0041996"}


id: PBO:0071941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 18","termid":"PBO:0071941"}


id: PBO:0048596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone inducible transmembrane protein","termid":"PBO:0048596"}


id: GO:0060906
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104598],"is_not":false,"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of non-coding RNA-mediated heterochromatin formation.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0010964"},{"relation_name":"is_a","term_name":"negative regulation of heterochromatin formation","termid":"GO:0031452"},{"relation_name":"is_a","term_name":"negative regulation of gene silencing by regulatory ncRNA","termid":"GO:0060967"},{"relation_name":"negatively_regulates","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of regulatory ncRNA-mediated heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of RNAi-mediated heterochromatin assembly","type":"exact"},{"name":"negative regulation of chromatin silencing by small RNA","type":"related"},{"name":"negative regulation of heterochromatin assembly by small RNA","type":"narrow"},{"name":"negative regulation of ncRNA-mediated heterochromatin formation","type":"exact"},{"name":"negative regulation of small non-coding RNA-mediated heterochromatin formation","type":"narrow"}],"termid":"GO:0060906","terms_by_termid":{"GO:0060906":null}}


id: PBO:0038661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrosomal vesicle protein 1","termid":"PBO:0038661"}


id: PBO:0078739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRMT1 pseudogene 1","termid":"PBO:0078739"}


id: PBO:0050105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 15","termid":"PBO:0050105"}


id: PR:O94733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.01","synonyms":[{"name":"Spom972h-SPCC191.01","type":"exact"}],"termid":"PR:O94733"}


id: PBO:0078750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 11 homolog","termid":"PBO:0078750"}


id: PBO:0090282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndc80 complex subunit Spc25","termid":"PBO:0090282"}


id: PR:O36015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA methyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02006","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.03c","secondary_identifiers":["UniProtKB:O36015"],"synonyms":[{"name":"2'-O-ribose RNA methyltransferase TRM7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ1","type":"exact"}],"termid":"PR:O36015"}


id: GO:0051229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the spindle during a meiotic cell cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle organization","termid":"GO:0000212"},{"relation_name":"is_a","term_name":"spindle disassembly","termid":"GO:0051230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"meiotic spindle disassembly","synonyms":[{"name":"meiotic spindle breakdown","type":"exact"},{"name":"meiotic spindle catabolism","type":"exact"},{"name":"meiotic spindle degradation","type":"exact"},{"name":"spindle breakdown during meiosis","type":"exact"},{"name":"spindle degradation during meiosis","type":"exact"},{"name":"spindle disassembly during meiosis","type":"exact"}],"termid":"GO:0051229"}


id: SO:1000162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby the segment between the first two breaks listed is removed and inserted at the third break; the orientation of the insertion with respect to its flanking segments is not recorded.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrachromosomal_transposition","termid":"SO:1000041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unoriented_intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)uTp","type":"related"},{"name":"unorientated intrachromosomal transposition","type":"exact"}],"termid":"SO:1000162"}


id: PBO:0087033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L16A; N-terminally acetylated, binds 5.8 S rRNA; transcriptionally regulated by Rap1p; homologous to mammalian ribosomal protein L13A and bacterial L13; RPL16A has a paralog, RPL16B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087033"}


id: GO:1904164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of triglyceride homeostasis.","definition_xrefs":["GO_REF:0000058","GOC:rph","GOC:TermGenie","PMID:22541436","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of triglyceride homeostasis (obsolete GO:1904164)","synonyms":[{"name":"down regulation of triacylglycerol homeostasis","type":"exact"},{"name":"down regulation of triglyceride homeostasis","type":"exact"},{"name":"down-regulation of triacylglycerol homeostasis","type":"exact"},{"name":"down-regulation of triglyceride homeostasis","type":"exact"},{"name":"downregulation of triacylglycerol homeostasis","type":"exact"},{"name":"downregulation of triglyceride homeostasis","type":"exact"},{"name":"inhibition of triacylglycerol homeostasis","type":"narrow"},{"name":"inhibition of triglyceride homeostasis","type":"narrow"},{"name":"negative regulation of triacylglycerol homeostasis","type":"exact"}],"termid":"GO:1904164"}


id: RO:0002445
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with_via_parasite-host_interaction","termid":"RO:0002443"},{"relation_name":"is_a","term_name":"host_of","termid":"RO:0002453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasitized_by","synonyms":[{"name":"directly parasitized by","type":"exact"}],"termid":"RO:0002445"}


id: GO:1901648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actomyosin contractile ring localization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actomyosin contractile ring localization (obsolete GO:1901648)","synonyms":[{"name":"regulation of contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"regulation of contractile ring localization involved in cell cycle cytokinesis","type":"exact"}],"termid":"GO:1901648"}


id: PBO:0047800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box I3","termid":"PBO:0047800"}


id: PBO:0004798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Scj1 (predicted)","termid":"PBO:0004798"}


id: PATO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000339 gametophytic compatability value (obsolete PATO:0000339)","termid":"PATO:0000339"}


id: PBO:0054888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2302","termid":"PBO:0054888"}


id: GO:0052355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont cell wall cellulose (obsolete GO:0052355)","termid":"GO:0052355"}


id: GO:0097375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a spinal sensory neuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A spinal sensory neuron is a sensory neuron that project to the spinal cord.","definition_xrefs":["GOC:pr","GOC:yaf","CL:0009000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal sensory neuron axon guidance","termid":"GO:0097375"}


id: GO:0061079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the left horn of the sinus venosus from its initial formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"sinus venosus development","termid":"GO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left horn of sinus venosus development","termid":"GO:0061079"}


id: PBO:0069502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 769, pseudogene","termid":"PBO:0069502"}


id: GO:0045213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving neurotransmitter receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter receptor metabolic process (obsolete GO:0045213)","synonyms":[{"name":"neurotransmitter receptor metabolism","type":"exact"}],"termid":"GO:0045213"}


id: GO:0046807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and maintenance of the viral scaffold around which the viral capsid is constructed.","definition_xrefs":["ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral capsid assembly","termid":"GO:0019069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral scaffold assembly and maintenance","termid":"GO:0046807"}


id: FYPO:0001555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the intermediate RNAs formed during tRNA processing differ from wild type in size.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"formation of abnormal tRNA processing intermediates","synonyms":[{"name":"abnormal tRNA maturation intermediates","type":"exact"},{"name":"formation of abnormal tRNA processing intermediates during mitotic cell cycle","type":"related"},{"name":"formation of abnormal tRNA processing intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0001555"}


id: GO:0043419
data:
  {"annotated_genes":["SJAG_04679","SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87578,115059],"is_not":false,"summary":null,"term":"GO:0043419"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of urea, the water soluble compound O=C-(NH2)2.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea metabolic process","termid":"GO:0019627"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02766":null,"SJAG_04679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0071941","GO:0008150"],"is_obsolete":false,"name":"urea catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"urea breakdown","type":"exact"},{"name":"urea catabolism","type":"exact"},{"name":"urea decomposition","type":"exact"},{"name":"urea degradation","type":"exact"}],"termid":"GO:0043419","terms_by_termid":{"GO:0043419":null}}


id: GO:1905600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor-mediated endocytosis involved in cholesterol transport.","definition_xrefs":["GOC:BHF","PMID:22848640","GOC:TermGenie","GO_REF:0000058","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"regulates","term_name":"receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:0090118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor-mediated endocytosis involved in cholesterol transport","synonyms":[{"name":"regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"}],"termid":"GO:1905600"}


id: GO:0015668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to give double-stranded fragments with terminal 5'-phosphates. ATP hydrolysis is required. Cleavage is dependent on the presence of two copies of a specific recognition sequence in an inverse orientation in the DNA. Cleavage occurs at a specific distance from one of the recognition sites.","definition_xrefs":["EC:3.1.21.5","PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"},{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"type III site-specific deoxyribonuclease activity","secondary_identifiers":["MetaCyc:3.1.21.5-RXN"],"synonyms":[{"name":"type III restriction enzyme activity","type":"exact"}],"termid":"GO:0015668"}


id: PR:O42910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr7 gene.","definition_xrefs":["UniProtKB:O42910","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 7, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.03c","synonyms":[{"name":"Spom972h-ppr7","type":"exact"}],"termid":"PR:O42910"}


id: GO:0043893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of acetate from one side of a membrane to the other according to the reaction: acetate(out) + cation(out) = acetate(in) + cation(in).","definition_xrefs":["PMID:14563880","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate transmembrane transporter activity","termid":"GO:0015123"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"acetate:monoatomic cation symporter activity","synonyms":[{"name":"ActP","type":"related"},{"name":"acetate permease","type":"broad"},{"name":"acetate-cation symporter activity","type":"exact"},{"name":"acetate/cation symporter activity","type":"exact"},{"name":"acetate:cation symporter activity","type":"broad"},{"name":"cation-acetate symporter activity","type":"exact"},{"name":"cation/acetate symporter activity","type":"exact"},{"name":"cation:acetate symporter activity","type":"exact"}],"termid":"GO:0043893"}


id: GO:0018791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate = CO2 + 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate.","definition_xrefs":["UM-BBD_reactionID:r0398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate decarboxylase activity","termid":"GO:0018791"}


id: PBO:0062385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 4 pseudogene","termid":"PBO:0062385"}


id: MOD:00123
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-carboxy-L-lysine.","definition_xrefs":["PubMed:4436319","PubMed:637859","PubMed:11369851","RESID:AA0114","PubMed:7754395","Unimod:299#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-carboxy-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(carboxyamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-carbamic hexanoic acid","type":"exact"},{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"},{"name":"MOD_RES N6-carboxylysine","type":"exact"},{"name":"N6-carbamyllysine","type":"related"},{"name":"N6-carboxy-L-lysine","type":"exact"},{"name":"N6-carboxylysine","type":"exact"},{"name":"N6CbxLys","type":"exact"},{"name":"lysine NZ-carboxylic acid","type":"exact"}],"termid":"MOD:00123"}


id: PBO:0083460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ILS1/YBL076C","termid":"PBO:0083460"}


id: PBO:0058653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6781","termid":"PBO:0058653"}


id: GO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels during intussusceptive angiogenesis.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"},{"relation_name":"part_of","term_name":"intussusceptive angiogenesis","termid":"GO:0002041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell migration involved in intussusceptive angiogenesis","termid":"GO:0002044"}


id: PBO:0047436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 7","termid":"PBO:0047436"}


id: PBO:0062684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 5 pseudogene","termid":"PBO:0062684"}


id: GO:0045968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone biosynthetic process","termid":"GO:0007557"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"negative regulation of juvenile hormone metabolic process","termid":"GO:0045928"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone biosynthetic process","termid":"GO:0006718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of juvenile hormone biosynthetic process","synonyms":[{"name":"down regulation of juvenile hormone biosynthetic process","type":"exact"},{"name":"down-regulation of juvenile hormone biosynthetic process","type":"exact"},{"name":"downregulation of juvenile hormone biosynthetic process","type":"exact"},{"name":"inhibition of juvenile hormone biosynthetic process","type":"narrow"},{"name":"negative regulation of juvenile hormone anabolism","type":"exact"},{"name":"negative regulation of juvenile hormone biosynthesis","type":"exact"},{"name":"negative regulation of juvenile hormone formation","type":"exact"},{"name":"negative regulation of juvenile hormone synthesis","type":"exact"}],"termid":"GO:0045968"}


id: PBO:0077404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 139","termid":"PBO:0077404"}


id: PBO:0045049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide dehydrogenase","termid":"PBO:0045049"}


id: PBO:0056905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIF4GD divergent transcript","termid":"PBO:0056905"}


id: GO:0106392
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Aprotein complex required for the splicing of intron 3 of the cytochrome b (COB) gene. In S. cerevisiae, the complex contains the maturase bI3 (which derives from one of the products of the splicing), the MRS1 cofactor and the intron 4 of the cytochrome b pre-mRNA. The two proteins stimulate the ribozyme activity of the pre-mRNA which autoctalyse a group I intron splicing.","definition_xrefs":["PMID:11773622","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"bI3 intron splicing complex","secondary_identifiers":["Intact:EBI-16426213"],"termid":"GO:0106392"}


id: PBO:0072414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 19","termid":"PBO:0072414"}


id: PR:O13704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpd1 gene.","definition_xrefs":["UniProtKB:O13704","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C13F5.05, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.05","synonyms":[{"name":"Spom972h-mpd1","type":"exact"}],"termid":"PR:O13704"}


id: PBO:0060688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-deacetylase and N-sulfotransferase 3","termid":"PBO:0060688"}


id: GO:0102355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-3-(5-oxofuran-2-ylidene)propanoate + H2O = 3-maleylpyruvate + H+.","definition_xrefs":["GOC:pz","EC:3.1.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"2-oxo-3-(5-oxofuran-2-ylidene)propanoate lactonase activity","secondary_identifiers":["MetaCyc:RXN-13371","RHEA:33967"],"termid":"GO:0102355"}


id: PR:P87059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial intermembrane space import and assembly protein 40 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21622:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space import and assembly protein 40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.11c","secondary_identifiers":["UniProtKB:P87059"],"synonyms":[{"name":"SPAC57A10.11c","type":"related"},{"name":"Spom972h-CHCHD4","type":"exact"},{"name":"mitochondrial import inner membrane translocase TIM40 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tim40","type":"related"}],"termid":"PR:P87059"}


id: GO:0140096
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id: GO:0060811
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data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 3'-geranyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan.","definition_xrefs":["PubMed:16407988","ChEBI:35304","PubMed:8168130","RESID:AA0408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"isoprenylated tryptophan","termid":"MOD:01115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-geranyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan","synonyms":[{"name":"(2S,3R)-3-geranyl-2,3-dihydro-2,N(alpha)-cyclo-L-tryptophan","type":"exact"},{"name":"(2S,3aR,8aS)-3a-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-1,2,3,3a,8,8a-hexahydropyrrolo[2,3-b]indole-2-carboxylic acid","type":"exact"},{"name":"3'-geranyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan","type":"exact"},{"name":"3'Ger2'N2cycTrp","type":"exact"},{"name":"LIPID 3'-geranyl-2',N2-cyclotryptophan","type":"exact"}],"termid":"MOD:00817"}


id: PBO:0081686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 607","termid":"PBO:0081686"}


id: PBO:0031167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_import_during_vegetative_growth","termid":"PBO:0031167"}


id: PBO:0058219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4509-3","termid":"PBO:0058219"}


id: PBO:0070276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 17","termid":"PBO:0070276"}


id: PBO:0076115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 18 pseudogene 1","termid":"PBO:0076115"}


id: PBO:0045098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DM1 locus antisense RNA","termid":"PBO:0045098"}


id: GO:0061198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a spongiform papilla from unspecified parts. The fungiform papilla is a mushroom-shaped papilla of the tongue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"fungiform papilla morphogenesis","termid":"GO:0061197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fungiform papilla formation","termid":"GO:0061198"}


id: GO:0031241
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the outer membrane that faces the periplasm of the cell.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"periplasmic side of cell outer membrane","synonyms":[{"name":"internal leaflet of cell outer membrane","type":"exact"},{"name":"internal side of cell outer membrane","type":"exact"},{"name":"internal side of outer membrane","type":"exact"}],"termid":"GO:0031241"}


id: PBO:0046285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 3","termid":"PBO:0046285"}


id: PBO:0081066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DBF-type containing 2","termid":"PBO:0081066"}


id: PBO:0002771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II, and III subunit Rpb10","termid":"PBO:0002771"}


id: PBO:0059317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57","termid":"PBO:0059317"}


id: PBO:0061550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IIIA","termid":"PBO:0061550"}


id: PBO:0047233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member E","termid":"PBO:0047233"}


id: PBO:0026679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_dithiothreitol","termid":"PBO:0026679"}


id: FYPO:0008077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of phosphatidylserine binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:25959226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid binding","termid":"FYPO:0005307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased phosphatidylserine binding","termid":"FYPO:0008077"}


id: PBO:0057468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 586","termid":"PBO:0057468"}


id: GO:0044842
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lumen of a gut granule, a lysosome-related organelle contained within the intestinal cells of the nematode C. elegans.","definition_xrefs":["GOC:kmv","PMID:22916203","PMID:24204312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"gut granule","termid":"GO:0044840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"gut granule lumen","termid":"GO:0044842"}


id: GO:0071376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticotropin-releasing hormone stimulus. Corticotropin-releasing hormone is a peptide hormone involved in the stress response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticotropin-releasing hormone","termid":"GO:0043435"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to corticotropin-releasing hormone stimulus","synonyms":[{"name":"cellular response to CRF stimulus","type":"exact"},{"name":"cellular response to CRH stimulus","type":"exact"},{"name":"cellular response to corticoliberin stimulus","type":"exact"},{"name":"cellular response to corticotropin-releasing factor stimulus","type":"exact"}],"termid":"GO:0071376"}


id: GO:0045664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron differentiation","termid":"GO:0045664"}


id: GO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the synthesis of free D-serine from L-serine.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"serine racemase activity","secondary_identifiers":["EC:5.1.1.18","RHEA:10980","MetaCyc:5.1.1.18-RXN","Reactome:R-HSA-9014766"],"termid":"GO:0030378"}


id: PBO:0047661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 14","termid":"PBO:0047661"}


id: GO:0042849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose. L-sorbose is formed by bacterial oxidation of sorbitol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-sorbose metabolic process","termid":"GO:0019312"},{"relation_name":"is_a","term_name":"sorbose biosynthetic process","termid":"GO:0042847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"L-sorbose biosynthetic process","synonyms":[{"name":"L-sorbose anabolism","type":"exact"},{"name":"L-sorbose biosynthesis","type":"exact"},{"name":"L-sorbose formation","type":"exact"},{"name":"L-sorbose synthesis","type":"exact"}],"termid":"GO:0042849"}


id: PBO:0003320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein Mdm35 (predicted)","termid":"PBO:0003320"}


id: PBO:0039545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 42","termid":"PBO:0039545"}


id: GO:0015790
data:
  {"annotated_genes":["SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65747,101079],"is_not":false,"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of UDP-xylose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-xylose is a substance composed of xylose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"UDP-xylose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"UDP-xylose transport","type":"related"}],"termid":"GO:0015790","terms_by_termid":{"GO:0015790":null}}


id: GO:0002798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antibacterial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antibacterial peptide production","termid":"GO:0002787"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide secretion","termid":"GO:0002795"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide secretion","termid":"GO:0002797"},{"relation_name":"negatively_regulates","term_name":"antibacterial peptide secretion","termid":"GO:0002779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0010467","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antibacterial peptide secretion","synonyms":[{"name":"down regulation of antibacterial peptide secretion","type":"exact"},{"name":"down-regulation of antibacterial peptide secretion","type":"exact"},{"name":"downregulation of antibacterial peptide secretion","type":"exact"},{"name":"inhibition of antibacterial peptide secretion","type":"narrow"}],"termid":"GO:0002798"}


id: PBO:0109002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 2","termid":"PBO:0109002"}


id: GO:0047154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + D-methylmalonyl-CoA = oxaloacetic acid + propionyl-CoA.","definition_xrefs":["EC:2.1.3.1","MetaCyc:2.1.3.1-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"methylmalonyl-CoA carboxytransferase activity","secondary_identifiers":["RHEA:20764","UM-BBD_reactionID:r0923"],"synonyms":[{"name":"(S)-2-methyl-3-oxopropanoyl-CoA:pyruvate","type":"related"},{"name":"(S)-2-methyl-3-oxopropanoyl-CoA:pyruvate carboxyltransferase activity","type":"related"},{"name":"(S)-methylmalonyl-CoA:pyruvate carboxyltransferase activity","type":"related"},{"name":"(S)-methylmalonyl-CoA:pyruvate carboxytransferase activity","type":"related"},{"name":"methylmalonyl coenzyme A carboxyltransferase activity","type":"related"},{"name":"methylmalonyl-CoA carboxyltransferase activity","type":"exact"},{"name":"methylmalonyl-CoA transcarboxylase activity","type":"related"},{"name":"oxalacetic transcarboxylase activity","type":"related"},{"name":"transcarboxylase activity","type":"related"}],"termid":"GO:0047154"}


id: SO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence TTTRTTTACA, bound by transcription factors with a forkhead DNA-binding domain.","definition_xrefs":["PMID:15195092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead_motif","synonyms":[{"name":"forkhead motif","type":"exact"}],"termid":"SO:0001847"}


id: PBO:0074883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 62A","termid":"PBO:0074883"}


id: PBO:0076457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 3","termid":"PBO:0076457"}


id: PBO:0081822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 740","termid":"PBO:0081822"}


id: PBO:0028502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_splicing_of_mRNA_introns_with_low_A/U_content","termid":"PBO:0028502"}


id: PBO:0002846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ca2+/Mn2+ transporting P-type ATPase P5 type Cta5","termid":"PBO:0002846"}


id: PBO:0063074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase alpha","termid":"PBO:0063074"}


id: PBO:0051916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 1 pseudogene 1","termid":"PBO:0051916"}


id: PBO:0034739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase Qtrtd1/Qtr2","termid":"PBO:0034739"}


id: FYPO:0004565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of pheromone response genes is increased. Pheromone response genes are normally transcribed in response to a pheromone stimulus.","definition_xrefs":["PomBase:mah","PMID:15580593","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased transcription of pheromone response gene mRNA during vegetative growth","synonyms":[{"name":"increased transcription of pheromone response gene RNA during vegetative growth","type":"exact"},{"name":"increased transcription of pheromone response gene mRNA during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004565"}


id: GO:0099076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of cargo from the mitochondrion to the peroxisome, mediated by a mitochondrion-derived vesicle.","definition_xrefs":["GOC:pad","GOC:bc","GOC:PARL-UCL","PMID:20619655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion-derived vesicle mediated transport","termid":"GO:0099075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"mitochondrion to peroxisome vesicle-mediated transport","synonyms":[{"name":"mitochondrion to peroxisome transport","type":"exact"}],"termid":"GO:0099076"}


id: GO:0046585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of enniatins, any of various cyclodepsipeptide antibiotics from Fusarium species that function as ionophores.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"enniatin metabolic process","termid":"GO:0046584"},{"relation_name":"is_a","term_name":"depsipeptide biosynthetic process","termid":"GO:0050763"},{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"enniatin biosynthetic process","synonyms":[{"name":"enniatin anabolism","type":"exact"},{"name":"enniatin biosynthesis","type":"exact"},{"name":"enniatin formation","type":"exact"},{"name":"enniatin synthesis","type":"exact"}],"termid":"GO:0046585"}


id: PR:Q10362
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.11c","synonyms":[{"name":"Spom972h-set3","type":"exact"}],"termid":"PR:Q10362"}


id: FYPO:0002263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that enters the cell cycle but then becomes elongated and undergoes cell cycle arrest, and eventually dies without completing cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, cell cycle arrest","termid":"FYPO:0001924"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0000631"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, cell cycle arrest, elongated cell","synonyms":[{"name":"inviable germinated spore, without cell division, cell cycle arrest, elongated cell","type":"exact"},{"name":"lethal after spore germination, without cell division, cell cycle arrest, elongated cell","type":"exact"}],"termid":"FYPO:0002263"}


id: GO:1900802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cspyrone B1.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"cspyrone B1 metabolic process","termid":"GO:1900800"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"cspyrone B1 biosynthetic process","synonyms":[{"name":"cspyrone B1 anabolism","type":"exact"},{"name":"cspyrone B1 biosynthesis","type":"exact"},{"name":"cspyrone B1 formation","type":"exact"},{"name":"cspyrone B1 synthesis","type":"exact"}],"termid":"GO:1900802"}


id: PBO:0044392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 9","termid":"PBO:0044392"}


id: GO:0051566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanidin 3-glucoside + UDP-rhamnose = anthocyanidin 3-rutinoside + UDP.","definition_xrefs":["PMID:8130800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"anthocyanidin-3-glucoside rhamnosyltransferase activity","synonyms":[{"name":"3RT activity","type":"broad"},{"name":"anthocyanidin 3-glucoside-rhamnosyltransferase activity","type":"exact"}],"termid":"GO:0051566"}


id: GO:0060622
data:
  {"annotated_genes":["SJAG_04666","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83689,88542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of ascospore wall beta-glucan biosynthetic process, the chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0090093"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ascospore wall beta-glucan biosynthetic process","termid":"GO:0034412"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0071554","GO:0044085","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of ascospore wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060622","terms_by_termid":{"GO:0140748":null}}


id: GO:0033801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + vitexin 2''-O-beta-L-rhamnoside = S-adenosyl-L-homocysteine + 7-O-methylvitexin 2''-O-beta-L-rhamnoside.","definition_xrefs":["EC:2.1.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"vitexin 2''-O-rhamnoside 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4981","RHEA:11432"],"synonyms":[{"name":"S-adenosyl-L-methionine:vitexin-2''-O-beta-L-rhamnoside 7-O-methyltransferase activity","type":"related"}],"termid":"GO:0033801"}


id: PBO:0027446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_antisense_RNA_transcription_at_stress_response_genes","termid":"PBO:0027446"}


id: PBO:0059921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 7","termid":"PBO:0059921"}


id: GO:0006777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257","PMID:22370186","PMID:23201473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"},{"relation_name":"is_a","term_name":"molybdopterin cofactor biosynthetic process","termid":"GO:0032324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Mo-molybdopterin cofactor biosynthetic process","secondary_identifiers":["MetaCyc:PWY-6823"],"synonyms":[{"name":"Mo-molybdopterin cofactor anabolism","type":"exact"},{"name":"Mo-molybdopterin cofactor biosynthesis","type":"exact"},{"name":"Mo-molybdopterin cofactor formation","type":"exact"},{"name":"Mo-molybdopterin cofactor synthesis","type":"exact"},{"name":"Moco biosynthesis","type":"exact"},{"name":"Moco biosynthetic process","type":"exact"},{"name":"molybdenum cofactor biosynthetic process","type":"related"}],"termid":"GO:0006777"}


id: GO:0062180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: calcidiol + 2 H+ + O2 + 2 reduced [adrenodoxin] = (23S)-23,25-dihydroxycalciol + H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:30205156","PMID:22100522","RHEA:46616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"25-hydroxycholecalciferol-23-hydroxylase activity","termid":"GO:0062180"}


id: GO:0072703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methyl methanesulfonate (MMS) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methyl methanesulfonate","termid":"GO:0072702"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methyl methanesulfonate","synonyms":[{"name":"cellular response to MMS","type":"exact"}],"termid":"GO:0072703"}


id: PBO:0004148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid uptake transporter Fnx2","termid":"PBO:0004148"}


id: PATO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001214 temparature_unit (obsolete PATO:0001214)","termid":"PATO:0001214"}


id: PBO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taz1 interacting factor 1, autophagy protein","termid":"PBO:0001649"}


id: PBO:0060771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B5 pseudogene 2","termid":"PBO:0060771"}


id: PBO:0088355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp21","termid":"PBO:0088355"}


id: PBO:0078684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (TTT) 17-1","termid":"PBO:0078684"}


id: GO:0100049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates phosphatidylcholine biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylcholine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100049)","termid":"GO:0100049"}


id: GO:0072317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans that contributes to the release of ascospores from the ascus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete glucan endo-1,3-beta-D-glucosidase activity involved in ascospore release from ascus (obsolete GO:0072317)","termid":"GO:0072317"}


id: GO:0021516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021","PMID:11179871","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"spinal cord development","termid":"GO:0021510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal spinal cord development","termid":"GO:0021516"}


id: PBO:0088747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Gsf1","termid":"PBO:0088747"}


id: PBO:0002918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L22 (predicted)","termid":"PBO:0002918"}


id: GO:1903943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte apoptotic process.","definition_xrefs":["PMID:8649852","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"hepatocyte apoptotic process","termid":"GO:0097284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatocyte apoptotic process","synonyms":[{"name":"regulation of hepatocyte apoptosis","type":"narrow"}],"termid":"GO:1903943"}


id: GO:0008659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxytetradecanoyl-[acyl-carrier protein] = tetradecenoyl-[acyl-carrier protein] + H2O.","definition_xrefs":["PMID:12368867","RHEA:41892","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","termid":"GO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(3R)-3-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity","synonyms":[{"name":"(3R)-hydroxymyristoyl-ACP dehydratase activity","type":"exact"},{"name":"(3R)-hydroxymyristoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"}],"termid":"GO:0008659"}


id: PBO:0057343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 527","termid":"PBO:0057343"}


id: GO:0036007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A body present in the cytoplasm of some dinoflagellates, which is the source of bioluminescence; emits light on acidification in the presence of oxygen.","definition_xrefs":["PMID:4501583","GOC:pr","PMID:5642469","GOC:mag"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"scintillon","termid":"GO:0036007"}


id: GO:0045964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving dopamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine metabolic process","termid":"GO:0042053"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine metabolic process","termid":"GO:0045915"},{"relation_name":"positively_regulates","term_name":"dopamine metabolic process","termid":"GO:0042417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine metabolic process","synonyms":[{"name":"activation of dopamine metabolic process","type":"narrow"},{"name":"positive regulation of dopamine metabolism","type":"exact"},{"name":"stimulation of dopamine metabolic process","type":"narrow"},{"name":"up regulation of dopamine metabolic process","type":"exact"},{"name":"up-regulation of dopamine metabolic process","type":"exact"},{"name":"upregulation of dopamine metabolic process","type":"exact"}],"termid":"GO:0045964"}


id: GO:0030667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a secretory granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"secretory granule membrane","synonyms":[{"name":"secretory vesicle membrane","type":"broad"}],"termid":"GO:0030667"}


id: GO:0100061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription factor catabolic process process that negatively regulates SREBP signaling pathway.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by transcription factor catabolic process (obsolete GO:0100061)","termid":"GO:0100061"}


id: PBO:0044721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 8 (pseudogene)","termid":"PBO:0044721"}


id: PBO:0061266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notum, palmitoleoyl-protein carboxylesterase","termid":"PBO:0061266"}


id: FYPO:0002399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"},{"relation_name":"output_of","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton","synonyms":[{"name":"abnormal microtubule cytoskeleton physical object quality","type":"exact"},{"name":"disorganized microtubule cytoskeleton","type":"related"}],"termid":"FYPO:0002399"}


id: PR:Q9Y7R9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC306.11 gene.","definition_xrefs":["UniProtKB:Q9Y7R9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C306.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.11","synonyms":[{"name":"Spom972h-SPCC306.11","type":"exact"}],"termid":"PR:Q9Y7R9"}


id: PBO:0061387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 47","termid":"PBO:0061387"}


id: PBO:0075788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 9 pseudogene 1","termid":"PBO:0075788"}


id: GO:0031368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a Pro-Xaa bond by a metallopeptidase mechanism to release a C-terminal amino acid.","definition_xrefs":["GOC:mah","EC:3.4.17.16"],"gene_count":0,"genotype_count":0,"name":"obsolete Pro-X metallocarboxypeptidase activity (obsolete GO:0031368)","synonyms":[{"name":"Pro-X metallocarboxypeptidase activity","type":"exact"},{"name":"carboxypeptidase P activity","type":"narrow"},{"name":"membrane Pro-X carboxypeptidase activity","type":"narrow"},{"name":"membrane Pro-Xaa carboxypeptidase","type":"narrow"},{"name":"microsomal carboxypeptidase activity","type":"narrow"}],"termid":"GO:0031368"}


id: SO:0001156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between -10 and -60 relative to the TSS. Consensus sequence is WATCGATW.","definition_xrefs":["PMID:12537576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRE_motif","synonyms":[{"name":"DRE motif","type":"exact"},{"name":"NDM4","type":"exact"},{"name":"WATCGATW_motif","type":"exact"}],"termid":"SO:0001156"}


id: GO:0018659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + NADPH + H+ + O2 = protocatechuate + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase activity","secondary_identifiers":["MetaCyc:4-HYDROXYBENZOATE-3-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0109"],"synonyms":[{"name":"4-hydroxybenzoate 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxybenzoate monooxygenase activity","type":"related"},{"name":"4-hydroxybenzoate,NADPH:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"p-hydroxybenzoate hydrolyase activity","type":"related"},{"name":"p-hydroxybenzoate hydroxylase activity","type":"broad"},{"name":"p-hydroxybenzoate-3-hydroxylase activity","type":"related"},{"name":"p-hydroxybenzoic acid hydrolase activity","type":"related"},{"name":"p-hydroxybenzoic acid hydroxylase activity","type":"broad"},{"name":"p-hydroxybenzoic hydroxylase activity","type":"related"},{"name":"para-hydroxybenzoate hydroxylase activity","type":"broad"}],"termid":"GO:0018659"}


id: PBO:0004762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg3","termid":"PBO:0004762"}


id: PBO:0053637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 683","termid":"PBO:0053637"}


id: PBO:0044161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 pseudogene 1","termid":"PBO:0044161"}


id: PBO:0029241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_centromere_outer_repeat","termid":"PBO:0029241"}


id: PBO:0035810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0035810"}


id: PR:Q09777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G-protein signaling 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.12c","synonyms":[{"name":"Spom972h-rgs1","type":"exact"}],"termid":"PR:Q09777"}


id: PBO:0091141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase accessory subunit Qtrtd1/Qtr2","termid":"PBO:0091141"}


id: MOD:01836
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-[([1-(6-nitro-2H-1,3-benzodioxol-5-yl)ethoxy]carbonyl]lysine.","definition_xrefs":["PubMed:20218600","PubMed:21271704","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-[([1-(6-nitro-2H-1,3-benzodioxol-5-yl)ethoxy]carbonyl]lysine","synonyms":[{"name":"(2S)-2-amino-6-[([1-(6-nitro-1,3-benzodioxol-5-yl)ethoxy]carbonyl)amino]hexanoic acid","type":"exact"},{"name":"[(alpha-methyl-6-nitro-piperonyloxy)carbonyl]lysine","type":"exact"}],"termid":"MOD:01836"}


id: PBO:0091236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Con-6 family conserved fungal protein","termid":"PBO:0091236"}


id: GO:0047013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholate + NADP+ = 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanate + H+ + NADPH.","definition_xrefs":["RHEA:14129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholate 12-alpha dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.176-RXN","EC:1.1.1.176","KEGG_REACTION:R02793"],"synonyms":[{"name":"12-alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12alpha-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"12alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12alpha-hydroxysteroid:NADP+ 12-oxidoreductase activity","type":"broad"},{"name":"NAD-dependent 12alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"NADP-12alpha-hydroxysteroid dehydrogenase activity","type":"broad"}],"termid":"GO:0047013"}


id: PR:O59802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol N-acetylglucosaminyltransferase subunit C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04589","PANTHER:PTHR12982:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.04c","secondary_identifiers":["UniProtKB:O59802"],"synonyms":[{"name":"Spom972h-PIGC","type":"exact"}],"termid":"PR:O59802"}


id: PBO:0001568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting receptor for ubiquitinated membrane proteins, ESCRT 0 complex subunit Sst4","termid":"PBO:0001568"}


id: PBO:0057288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 508","termid":"PBO:0057288"}


id: FYPO:0000743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch internalization is abnormal. Actin cortical patch internalization is the process in which the patch moves from the cell surface to the inside of the cell.","definition_xrefs":["PomBase:mah","PMID:21620704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin cortical patch internalization","synonyms":[{"name":"abnormal F-actin patch internalization","type":"exact"},{"name":"abnormal actin cortical patch internalisation","type":"exact"},{"name":"abnormal actin cortical patch internalization during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch internalization during vegetative growth","type":"exact"},{"name":"abnormal actin patch internalization","type":"exact"}],"termid":"FYPO:0000743"}


id: GO:0035322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a mesenchymal cell from one site to another that will contribute to the formation of a limb bud.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell migration","termid":"GO:0090497"},{"relation_name":"part_of","term_name":"mesenchyme migration involved in limb bud formation","termid":"GO:0090496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell migration involved in limb bud formation","termid":"GO:0035322"}


