# terms

id: PBO:0113419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Selective autophagy receptor involved in aggrephagy and proteaphagy; ubiquitin (Ub)-binding protein that functions as a Ub-Atg8p adaptor in Ub-dependent autophagy; serves as a proteaphagy receptor for inactivate 26S proteasomes; contains a CUE domain that binds K48-and K63-linked Ub chains and monoubiquitin, facilitating intramolecular monoubiquitination; human TOLLIP is a functional CUE-domain homolog, that complements a null mutant, rescuing the hypersensitivity of the null mutant to Htt-96Q","termid":"PBO:0113419"}


id: PBO:0004350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm4 (predicted)","termid":"PBO:0004350"}


id: PBO:0060864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 7","termid":"PBO:0060864"}


id: PBO:0001391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf7","termid":"PBO:0001391"}


id: PBO:0042651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y like 2","termid":"PBO:0042651"}


id: PR:Q8WZK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI ethanolamine phosphate transferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12250:SF0","PRO:DNx","OMA:SCHPO02524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI ethanolamine phosphate transferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.08c","secondary_identifiers":["UniProtKB:Q8WZK2"],"synonyms":[{"name":"Spom972h-PIGN","type":"exact"},{"name":"immunosuppresant and temperature-sensitive protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8WZK2"}


id: GO:0035041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Unwinding of the condensed nuclear chromatin of an inactive male pronucleus after fertilization.","definition_xrefs":["GOC:bf","PMID:11735001","PMID:23352575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"},{"relation_name":"part_of","term_name":"male pronucleus assembly","termid":"GO:0035039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"sperm DNA decondensation","synonyms":[{"name":"sperm chromatin decondensation","type":"exact"}],"termid":"GO:0035041"}


id: FYPO:0002110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable tapered cell","termid":"FYPO:0002108"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"viable tapered vegetative cell","synonyms":[{"name":"viable bottle-shaped vegetative cell","type":"exact"},{"name":"viable bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable bottle/skittle vegetative cell","type":"exact"},{"name":"viable skittle-shaped vegetative cell","type":"exact"},{"name":"viable tapered cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002110"}


id: GO:0001092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor belonging to the TFIIA complex, one of the complexes involved in formation of the preinitiation complex (PIC) by RNA polymerase II and defined as a basal or general transcription factor.","definition_xrefs":["GOC:krc","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"TFIIA-class transcription factor complex binding","synonyms":[{"name":"TFIIA-class transcription factor binding","type":"exact"}],"termid":"GO:0001092"}


id: GO:0097642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with any member of the calcitonin family (e.g. adrenomedullin, adrenomedullin 2 (intermedin), amylin, calcitonin and calcitonin gene-related peptides (CGRPs)) to initiate a change in cell activity.","definition_xrefs":["InterPro:IPR003287","GOC:bhm","PMID:10871296","PMID:18687416","PMID:12037140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"calcitonin family receptor activity","termid":"GO:0097642"}


id: GO:0033531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stachyose, the tetrasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"stachyose metabolic process","synonyms":[{"name":"stachyose metabolism","type":"exact"}],"termid":"GO:0033531"}


id: GO:0033306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytol, (2E,7R,11R)-3,7,11,15-tetramethylhexadec-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"fatty alcohol metabolic process","termid":"GO:1903173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytol metabolic process","synonyms":[{"name":"phytol metabolism","type":"exact"}],"termid":"GO:0033306"}


id: PBO:0075355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 3","termid":"PBO:0075355"}


id: GO:0004868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A superfamily of proteins, many of which inhibit serine proteinases and exhibit a high degree of homology with classical serine proteinase inhibitors such as alpha1-antitrypsin or antithrombin.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete serpin (obsolete GO:0004868)","synonyms":[{"name":"serpin","type":"exact"}],"termid":"GO:0004868"}


id: PBO:0063315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain containing 2","termid":"PBO:0063315"}


id: GO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"In organisms that undergo pheromone-induced unidirectional conjugation, the process involved in desensitization following exposure to pheromone stimulus that acts to down-regulate further stimulation or block initial conjugation responses.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative adaptation of signaling pathway","termid":"GO:0022401"},{"relation_name":"part_of","term_name":"response to pheromone regulating pheromone-induced unidirectional conjugation","termid":"GO:0000765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative adaptation of signaling pathway by response to pheromone involved in pheromone-induced unidirectional conjugation","synonyms":[{"name":"adaptation to pheromone during pheromone-induced unidirectional conjugation","type":"related"},{"name":"desensitization to pheromone during pheromone-induced unidirectional conjugation","type":"exact"},{"name":"negative adaptation of signalling pathway by response to pheromone involved in pheromone-induced unidirectional conjugation","type":"exact"}],"termid":"GO:0000766"}


id: GO:0032716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-7 production.","definition_xrefs":["GOC:mah","PMID:25962782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-7 production","termid":"GO:0032676"},{"relation_name":"negatively_regulates","term_name":"interleukin-7 production","termid":"GO:0032636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-7 production","secondary_identifiers":["GO:0045412","GO:0150113"],"synonyms":[{"name":"down regulation of interleukin-7 production","type":"exact"},{"name":"down-regulation of interleukin-7 production","type":"exact"},{"name":"downregulation of interleukin-7 production","type":"exact"},{"name":"inhibition of interleukin-7 production","type":"narrow"},{"name":"negative regulation of IL-7 production","type":"exact"},{"name":"negative regulation of interleukin-7 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-7 secretion","type":"narrow"}],"termid":"GO:0032716"}


id: GO:0075205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont. The cAMP-mediated signal transduction is defined as a series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075205)","synonyms":[{"name":"modulation by host of symbiont cAMP-mediated signaling","type":"related"},{"name":"modulation by host of symbiont cAMP-mediated signalling","type":"exact"},{"name":"regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075205"}


id: PBO:0011116
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein LIc","termid":"PBO:0011116"}


id: GO:0003949
data:
  {"annotated_genes":["SJAG_01346"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93176],"is_not":false,"summary":null,"term":"GO:0003949"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide = 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide.","definition_xrefs":["RHEA:15469","EC:5.3.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04640","MetaCyc:PRIBFAICARPISOM-RXN"],"synonyms":[{"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide aldose-ketose-isomerase activity","type":"related"},{"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide ketol-isomerase activity","type":"related"},{"name":"N-(5'-phospho-D-ribosylformimino)-5-amino-1-(5''-phosphoribosyl)-4-imidazolecarboxamide isomerase activity","type":"related"},{"name":"N-(phosphoribosylformimino) aminophosphoribosylimidazolecarboxamide isomerase activity","type":"related"},{"name":"phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase activity","type":"related"},{"name":"phosphoribosylformiminoaminophosphoribosylimidazolecarboxamide isomerase activity","type":"related"}],"termid":"GO:0003949","terms_by_termid":{"GO:0003949":null}}


id: FYPO:0003344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed when a cell population is in stationary phase in which a cell is elongated, has two or more nuclei and more than one septum, and the septa not grouped together, but are located so as to form separate compartments with a single nucleus in each.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate multiseptate cell, single septa between nuclei","termid":"FYPO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000032"],"is_obsolete":false,"name":"elongated multinucleate multiseptate cell, single septa between nuclei, during stationary phase","synonyms":[{"name":"elongated multinucleate multiseptate cell, single septa between nuclei during stationary phase","type":"exact"},{"name":"elongated multinucleate multiseptate cell, single septa between nuclei, during stationary phase during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003344"}


id: PBO:0054815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2228","termid":"PBO:0054815"}


id: FYPO:0003928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the repair of double-strand breaks in DNA that are continually made (for example, by constitutive expression of a nuclease) results in repair junctions that differ from wild type.","definition_xrefs":["PomBase:mah","PMID:22093869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0000298","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"altered double-strand break repair junction in presence of persistent double-strand breaks","synonyms":[{"name":"abnormal double-strand break repair resulting in formation of altered repair junction","type":"exact"},{"name":"altered pattern of repair junctions in HO survivors","type":"narrow"}],"termid":"FYPO:0003928"}


id: GO:0071382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin I stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin I","termid":"GO:0034697"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin I stimulus","termid":"GO:0071382"}


id: PBO:0069897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1188, pseudogene","termid":"PBO:0069897"}


id: GO:0060972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the left/right axis in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left/right pattern formation","termid":"GO:0060972"}


id: PBO:0052117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNC4 divergent transcript","termid":"PBO:0052117"}


id: GO:0015753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-xylose is transported across a lipid bilayer, from one side of a membrane to the other. D-xylose (the naturally occurring enantiomer is always D-) is a constituent of plant polysaccharides.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"D-xylose transmembrane transport","synonyms":[{"name":"D-xylose transport","type":"related"}],"termid":"GO:0015753"}


id: GO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral budding which uses a host ESCRT protein complex, or complexes, to mediate the budding process.","definition_xrefs":["VZ:1536","UniProtKB-KW:KW-1187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding via host ESCRT complex","synonyms":[{"name":"host-assisted viral budding","type":"broad"},{"name":"viral budding through the ESCRT machinery","type":"related"}],"termid":"GO:0039702"}


id: PBO:0072023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 10","termid":"PBO:0072023"}


id: PBO:0077431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM167A pseudogene 2","termid":"PBO:0077431"}


id: FYPO:0004735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortical node","termid":"FYPO:0003919"},{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0007027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to medial cortical node, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to cortical medial dot, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cytokinetic nodes, with protein mislocalized to cytoplasm","type":"related"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortical nodes, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein recruitment to medial cortical node, with protein mislocalized to cytoplasm","type":"related"},{"name":"protein localization to medial cortical node abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0004735"}


id: PBO:0079590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D3 pseudogene 2","termid":"PBO:0079590"}


id: GO:0018818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde = acetylene + H2O.","definition_xrefs":["RHEA:17885","EC:4.2.1.112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"acetylene hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0591","KEGG_REACTION:R05380","MetaCyc:R141-RXN"],"synonyms":[{"name":"AH","type":"related"},{"name":"AHy","type":"related"},{"name":"acetaldehyde hydro-lyase activity","type":"related"}],"termid":"GO:0018818"}


id: GO:0044341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore, by a mechanism dependent upon sodium ions.","definition_xrefs":["GOC:BHF","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate ion transport","termid":"GO:0006817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"sodium-dependent phosphate transport","termid":"GO:0044341"}


id: GO:1903485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of maintenance of mitotic actomyosin contractile ring localization.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of maintenance of mitotic actomyosin contractile ring localization (obsolete GO:1903485)","synonyms":[{"name":"activation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"activation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"activation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"activation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"activation of maintenance of mitotic actomyosin contractile ring localization","type":"narrow"},{"name":"positive regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"positive regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"up regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"up regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"up regulation of maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"up-regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"up-regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"up-regulation of maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"upregulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"upregulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"upregulation of maintenance of mitotic actomyosin contractile ring localization","type":"exact"}],"termid":"GO:1903485"}


id: FYPO:0004090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to microtubule cytoskeleton","synonyms":[{"name":"abnormal protein localisation to microtubule cytoskeleton","type":"exact"}],"termid":"FYPO:0004090"}


id: PBO:0047471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dendritic cell secreted protein","termid":"PBO:0047471"}


id: PBO:0073390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 5","termid":"PBO:0073390"}


id: PBO:0016086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pwp1 (predicted)","termid":"PBO:0016086"}


id: PBO:0018022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic septin Spn7","termid":"PBO:0018022"}


id: PBO:0088775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex (poly(A)-specific ribonuclease) ubiquitin C-terminal hydrolase subunit Pan2","termid":"PBO:0088775"}


id: PBO:0029679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_nitrogen_starvation","termid":"PBO:0029679"}


id: PBO:0040031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARMCX5-GPRASP2 readthrough","termid":"PBO:0040031"}


id: PBO:0045481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 3","termid":"PBO:0045481"}


id: GO:0021529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of oligodendrocytes. Oligodendrocytes are non-neuronal cells. The primary function of oligodendrocytes is the myelination of nerve axons in the central nervous system. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord oligodendrocyte cell differentiation","termid":"GO:0021529"}


id: FYECO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tea tree oil was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tea tree oil","synonyms":[{"name":"tea tree oil added","type":"exact"}],"termid":"FYECO:0000415"}


id: PBO:0003357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine synthase","termid":"PBO:0003357"}


id: PBO:0069562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 834, pseudogene","termid":"PBO:0069562"}


id: PBO:0050790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3C2, pseudogene","termid":"PBO:0050790"}


id: PBO:0001052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere localized protein Cnl2","termid":"PBO:0001052"}


id: PBO:0079941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"usherin","termid":"PBO:0079941"}


id: PBO:0004525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucosidase Psu2 (predicted)","termid":"PBO:0004525"}


id: PBO:0077960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-1","termid":"PBO:0077960"}


id: GO:0018252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the green fluorescent protein chromophore cross-link from the alpha-carboxyl carbon of residue n, a serine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["RESID:AA0184"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-seryl-5-imidazolinone glycine (obsolete GO:0018252)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via L-seryl-5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via L-seryl-5-imidazolinone glycine","type":"exact"}],"termid":"GO:0018252"}


id: GO:0048855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the adenohypophysis are generated and organized. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus.","definition_xrefs":["GOC:cvs","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"adenohypophysis development","termid":"GO:0021984"},{"relation_name":"part_of","term_name":"hypophysis morphogenesis","termid":"GO:0048850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adenohypophysis morphogenesis","synonyms":[{"name":"adenophysis morphogenesis","type":"exact"},{"name":"anterior pituitary gland morphogenesis","type":"exact"},{"name":"anterior pituitary morphogenesis","type":"exact"}],"termid":"GO:0048855"}


id: PBO:0084232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydrophilin essential in desiccation-rehydration process; stress induced (osmotic, ionic, oxidative, heat shock and heavy metals); regulated by the HOG pathway; GRE1 has a paralog, SIP18, that arose from the whole genome duplication","termid":"PBO:0084232"}


id: PBO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-end-recognizing protein (predicted)","termid":"PBO:0002186"}


id: PBO:0072589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 15 homolog","termid":"PBO:0072589"}


id: FYECO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which linolenic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ linolenic acid","termid":"FYECO:0000051"}


id: PBO:0059733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 7","termid":"PBO:0059733"}


id: PBO:0030256
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_acetylation","termid":"PBO:0030256"}


id: PBO:0012303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 3, Pup3 (predicted)","termid":"PBO:0012303"}


id: PBO:0086271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein whose expression is induced during sporulation; not required for sporulation; heterologous expression in E. coli induces the SOS response that senses DNA damage","termid":"PBO:0086271"}


id: PBO:0012856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp43","termid":"PBO:0012856"}


id: PBO:0050203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 20","termid":"PBO:0050203"}


id: PBO:0002881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein Pex22 (predicted)","termid":"PBO:0002881"}


id: GO:0040020
data:
  {"annotated_genes":["SJAG_03529","SJAG_00364","SJAG_03327","SJAG_01330","SJAG_01082","SJAG_02712","SJAG_01680","SJAG_00266","SJAG_04287","SJAG_04259","SJAG_03438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93072],"is_not":false,"summary":null,"term":"GO:0040020"},{"annotations":[104075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[102416,110602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[76938,102721,85221,110366,112167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[104078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[109900],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[85223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[97449],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic nuclear division, the process in which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes.","definition_xrefs":["GOC:ems","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"is_a","term_name":"regulation of nuclear division","termid":"GO:0051783"},{"relation_name":"regulates","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_02712":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_03529":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"regulation of meiotic nuclear division","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of meiosis","type":"broad"}],"termid":"GO:0040020","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0040020":null,"GO:0045128":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0060546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 intronic transcript 1","termid":"PBO:0060546"}


id: GO:0045769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asymmetric cell division","termid":"GO:0009786"},{"relation_name":"is_a","term_name":"negative regulation of cell division","termid":"GO:0051782"},{"relation_name":"negatively_regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asymmetric cell division","synonyms":[{"name":"down regulation of asymmetric cell division","type":"exact"},{"name":"down-regulation of asymmetric cell division","type":"exact"},{"name":"downregulation of asymmetric cell division","type":"exact"},{"name":"inhibition of asymmetric cell division","type":"narrow"}],"termid":"GO:0045769"}


id: PBO:0057097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 193a","termid":"PBO:0057097"}


id: PBO:0043587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 1","termid":"PBO:0043587"}


id: PBO:0044246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut like homeobox 2 pseudogene 1","termid":"PBO:0044246"}


id: GO:0047396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-(alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol = 1,2-diacyl-sn-glycerol + 6-(alpha-D-glucosaminyl)-1D-myo-inositol 1,2-cyclic phosphate.","definition_xrefs":["EC:4.6.1.14","MetaCyc:3.1.4.47-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"glycosylphosphatidylinositol diacylglycerol-lyase activity","secondary_identifiers":["RHEA:14333"],"synonyms":[{"name":"(glycosyl)phosphatidylinositol-specific phospholipase C activity","type":"related"},{"name":"6-(alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol diacyl-sn-glycerol-lyase [6-(alpha-D-glucosaminyl)-1D-myo-inositol 1,2-cyclic phosphate-forming]","type":"related"},{"name":"6-(alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol diacylglycerol-lyase (1,2-cyclic-phosphate-forming) activity","type":"related"},{"name":"GPI-PLC activity","type":"related"},{"name":"GPI-specific phospholipase C activity","type":"related"},{"name":"VSG-lipase activity","type":"related"},{"name":"glycosyl inositol phospholipid anchor-hydrolyzing enzyme activity","type":"related"},{"name":"glycosylphosphatidylinositol-phospholipase C activity","type":"narrow"},{"name":"glycosylphosphatidylinositol-specific phospholipase C activity","type":"related"},{"name":"variant-surface-glycoprotein phospholipase C activity","type":"exact"}],"termid":"GO:0047396"}


id: GO:1990515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference where the silencing signal spreads 3' along the target mRNA, outside of the initial target sequence. Typically involves the formation of secondary siRNAs formed when the initial mRNA target sequence functions as a template for 5' to 3' synthesis of new dsRNA.","definition_xrefs":["PMID:24369430","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transitive RNA interference","termid":"GO:0036453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"3' transitive RNA interference","termid":"GO:1990515"}


id: GO:0048769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sarcomeres are added in series within a fiber.","definition_xrefs":["GOC:lm","PMID:15947030","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"sarcomerogenesis","synonyms":[{"name":"myofibril production","type":"exact"}],"termid":"GO:0048769"}


id: PBO:0041297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4A","termid":"PBO:0041297"}


id: GO:0072060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the outer medullary collecting duct over time, from its formation to the mature structure. The outer medullary collecting duct is the portion of the collecting duct that lies in the renal outer medulla.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collecting duct development","termid":"GO:0072044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer medullary collecting duct development","termid":"GO:0072060"}


id: GO:0106217
data:
  {"annotated_genes":["SJAG_00499","SJAG_04453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102870,106270],"is_not":false,"summary":null,"term":"GO:0106217"}]},"cv_name":"biological_process","definition":"The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine.","definition_xrefs":["PMID:28655767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00499":null,"SJAG_04453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA C3-cytosine methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106217","terms_by_termid":{"GO:0106217":null}}


id: PBO:0084776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein of unknown function; predicted to have 4 transmembrane segments; import is mediated by Tom70p and Mim1p; interacts genetically with a cdc4 mutation; SCM4 has a paralog, ATG33, that arose from the whole genome duplication","termid":"PBO:0084776"}


id: PBO:0040998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 3","termid":"PBO:0040998"}


id: PBO:0036505
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ5","termid":"PBO:0036505"}


id: GO:0034728
data:
  {"annotated_genes":["SJAG_04272","SJAG_04038","SJAG_03128","SJAG_02906","SJAG_02416","SJAG_01653","SJAG_04670","SJAG_02198","SJAG_03982","SJAG_04257","SJAG_02314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88501,93221,107376,109406,109718],"is_not":false,"summary":null,"term":"GO:0034728"},{"annotations":[103844,91202,110647,92577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006334"},{"annotations":[86220,93220,113004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of one or more nucleosomes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01653":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_02906":null,"SJAG_03128":null,"SJAG_03982":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04670":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"nucleosome organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleosome organisation","type":"exact"}],"termid":"GO:0034728","terms_by_termid":{"GO:0006334":null,"GO:0006337":null,"GO:0034728":null}}


id: GO:0030511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta receptor signaling pathway","termid":"GO:0017015"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090100"},{"relation_name":"is_a","term_name":"positive regulation of cellular response to transforming growth factor beta stimulus","termid":"GO:1903846"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta receptor signaling pathway","termid":"GO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta receptor signaling pathway","synonyms":[{"name":"activation of transforming growth factor beta receptor signaling pathway","type":"narrow"},{"name":"positive regulation of TGF-beta receptor signaling pathway","type":"exact"},{"name":"positive regulation of TGFbeta receptor signaling pathway","type":"exact"},{"name":"positive regulation of transforming growth factor beta receptor signalling pathway","type":"exact"},{"name":"stimulation of transforming growth factor beta receptor signaling pathway","type":"narrow"},{"name":"up regulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"up-regulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"upregulation of transforming growth factor beta receptor signaling pathway","type":"exact"}],"termid":"GO:0030511"}


id: PBO:0038345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_active_in","termid":"PBO:0038345"}


id: FYECO:0000357
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which aspartic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ aspartate","synonyms":[{"name":"+ Asp","type":"exact"}],"termid":"FYECO:0000357"}


id: GO:0033238
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of amine metabolism","type":"exact"},{"name":"regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033238","terms_by_termid":{"GO:0010967":null}}


id: PBO:0054160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1527","termid":"PBO:0054160"}


id: FYECO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which magnesium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Mg ions","synonyms":[{"name":"magnesium ions added","type":"exact"}],"termid":"FYECO:0000038"}


id: PBO:0052075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1","termid":"PBO:0052075"}


id: GO:0022606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the polarity of a cell along its proximal/distal axis.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of monopolar cell polarity","termid":"GO:0061162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of proximal/distal cell polarity","termid":"GO:0022606"}


id: GO:0071393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to progesterone","termid":"GO:0032570"},{"relation_name":"is_a","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to progesterone stimulus","termid":"GO:0071393"}


id: SO:0001882
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where a deletion fuses genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_fusion","synonyms":[{"name":"feature fusion","type":"exact"}],"termid":"SO:0001882"}


id: SO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small non-coding RNA (55-65 nt long) containing highly conserved 5' and 3' ends (16 and 8 nt, respectively) that are predicted to come together to form a stem structure. Identified in the social amoeba Dictyostelium discoideum and localized in the cytoplasm.","definition_xrefs":["PMID:15333696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class_I_RNA","synonyms":[{"name":"class I RNA","type":"exact"}],"termid":"SO:0000990"}


id: PBO:0039305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALK and LTK ligand 2","termid":"PBO:0039305"}


id: FYPO:0006593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of spindle microtubules from the spindle pole body (SPB) occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah","PMID:19942852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic microtubule nucleation","termid":"FYPO:0006336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule nucleation from spindle pole body","synonyms":[{"name":"decreased microtubule nucleation from spindle pole body during mitotic cell cycle","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation by spindle pole body","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from SPB","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during mitotic M phase","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during vegetative growth","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic SPB","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic spindle pole body","type":"exact"},{"name":"reduced mitotic spindle microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0006593"}


id: PBO:0040480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATXN2 antisense RNA","termid":"PBO:0040480"}


id: PBO:0063155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 1","termid":"PBO:0063155"}


id: PBO:0091207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln","termid":"PBO:0091207"}


id: PBO:0069832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1118, pseudogene","termid":"PBO:0069832"}


id: PBO:0068985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 229, pseudogene","termid":"PBO:0068985"}


id: FYPO:0001512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is branched and elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"branched, elongated cell","synonyms":[{"name":"branched, elongated cell during mitotic cell cycle","type":"related"},{"name":"branched, elongated cell during vegetative growth","type":"exact"},{"name":"branched, elongated vegetative cell","type":"exact"},{"name":"branched, long cell","type":"exact"}],"termid":"FYPO:0001512"}


id: PBO:0084770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial NAD+ transporter; member of the mitochondrial carrier subfamily (see also YIA6); has putative human ortholog; YEA6 has a paralog, YIA6, that arose from the whole genome duplication; human NAD+ transporter MCART1/SLC25A51 functionally complements the yia6 yea6 double null mutant, and yeast YEA6 reciprocally complements defects in MCART1/SLC25A51 null cells","termid":"PBO:0084770"}


id: PBO:0034301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tributary_of","termid":"PBO:0034301"}


id: PBO:0089670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA 5'-end processing Pet127","termid":"PBO:0089670"}


id: PBO:0073308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 4","termid":"PBO:0073308"}


id: GO:0005461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucuronic acid from one side of a membrane to the other. UDP-glucuronic acid is a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"UDP-glucuronic acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-174368","Reactome:R-HSA-5603297"],"termid":"GO:0005461"}


id: PBO:0076901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 55","termid":"PBO:0076901"}


id: PBO:0066950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 252","termid":"PBO:0066950"}


id: PBO:0044194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin C","termid":"PBO:0044194"}


id: GO:0006592
data:
  {"annotated_genes":["SJAG_01592","SJAG_00695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98738,108018],"is_not":false,"summary":null,"term":"GO:0006592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00695":null,"SJAG_01592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"ornithine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ornithine anabolism","type":"exact"},{"name":"ornithine biosynthesis","type":"exact"},{"name":"ornithine formation","type":"exact"},{"name":"ornithine synthesis","type":"exact"}],"termid":"GO:0006592","terms_by_termid":{"GO:0006592":null}}


id: PBO:0079517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthetase pseudogene 1","termid":"PBO:0079517"}


id: PBO:0079816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like with PHD and ring finger domains 2 pseudogene 1","termid":"PBO:0079816"}


id: PBO:0043258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 16","termid":"PBO:0043258"}


id: GO:0021981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of cells in the developing subpallium in which cells move from the ventricular and/or subventricular zone toward the surface of the brain.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell migration","termid":"GO:0021980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium radially oriented migration","termid":"GO:0021981"}


id: PBO:0088170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes G1 phase growth arrest and clonal death that is suppressed by overexpression of MCA1","termid":"PBO:0088170"}


id: PBO:0110979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 molecule (IN blood group)","termid":"PBO:0110979"}


id: GO:0043475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pigment, any general or particular coloring matter in living organisms, as part of the accumulation of pigment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process involved in pigmentation","termid":"GO:0043474"},{"relation_name":"part_of","term_name":"pigment accumulation","termid":"GO:0043476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment metabolic process involved in pigment accumulation","synonyms":[{"name":"pigment metabolic process during pigment accumulation","type":"related"},{"name":"pigment metabolism during pigment accumulation","type":"related"}],"termid":"GO:0043475"}


id: PBO:0055949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC57 pseudogene 1","termid":"PBO:0055949"}


id: GO:0044773
data:
  {"annotated_genes":["SJAG_03720","SJAG_02563","SJAG_00169","SJAG_04140","SJAG_01044","SJAG_03160","SJAG_04287","SJAG_00429","SJAG_01680","SJAG_02576","SJAG_01146","SJAG_01677","SJAG_02266","SJAG_01205","SJAG_00364","SJAG_03048","SJAG_01708","SJAG_00486","SJAG_04280","SJAG_01873","SJAG_00623","SJAG_01605","SJAG_02026","SJAG_02771","SJAG_03942","SJAG_01429","SJAG_02098","SJAG_04332","SJAG_00640","SJAG_01084","SJAG_04671","SJAG_03898","SJAG_00327","SJAG_03026","SJAG_05373","SJAG_01855"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78984,87918,89687,90067,95310,98480,102722,105427,107304,110367,110573,112110,112342,113793],"is_not":false,"summary":null,"term":"GO:0044773"},{"annotations":[87438,105786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[85280,102724,110368,86365,90070,97167,113115,105429,107837,96653,87561,87919,113794,95478,84719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[95479,85281,102725,103778,107838,87562,88649,86592,112169,92145,84720,113197,98482,108145,112170,85325,96973,95312,97637,90670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signal transduction process involved in mitotic DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"},{"relation_name":"is_a","term_name":"mitotic DNA integrity checkpoint signaling","termid":"GO:0044774"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01044":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"mitotic DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902402"],"synonyms":[{"name":"intracellular signal transduction pathway involved in mitotic DNA damage checkpoint","type":"narrow"},{"name":"intracellular signaling cascade involved in mitotic DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in mitotic DNA damage checkpoint","type":"related"},{"name":"mitotic DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic DNA damage checkpoint","type":"exact"}],"termid":"GO:0044773","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0044773":null}}


id: GO:0031294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the B- or T cell receptor to augment B- or T cell activation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte costimulation","synonyms":[{"name":"lymphocyte co-stimulation","type":"exact"}],"termid":"GO:0031294"}


id: FYPO:0001525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to L-thialysine. Cells stop growing (and may die) at a concentration of L-thialysine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to L-thialysine","synonyms":[{"name":"hypersensitive to L-thialysine","type":"exact"},{"name":"sensitive to L-thialysine during mitotic cell cycle","type":"related"},{"name":"sensitive to L-thialysine during vegetative growth","type":"exact"},{"name":"sensitive to thialysine","type":"broad"}],"termid":"FYPO:0001525"}


id: PBO:0086040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in DNA repair","termid":"PBO:0086040"}


id: FYPO:0001222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains two nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"binucleate vegetative cell","synonyms":[{"name":"binucleate cells during vegetative growth","type":"exact"},{"name":"binucleate during vegetative growth","type":"exact"},{"name":"binucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001222"}


id: GO:0045926
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"growth","termid":"GO:0040007"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of growth","type":"exact"},{"name":"down-regulation of growth","type":"exact"},{"name":"downregulation of growth","type":"exact"},{"name":"inhibition of growth","type":"narrow"}],"termid":"GO:0045926","terms_by_termid":{"GO:0051517":null}}


id: GO:0000376
data:
  {"annotated_genes":["SJAG_04738","SJAG_01517"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94829],"is_not":false,"summary":null,"term":"GO:0000376"},{"annotations":[94219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000372"}]},"cv_name":"biological_process","definition":"Splicing of RNA via a series of two transesterification reactions with exogenous guanosine as the initiating nucleophile.","definition_xrefs":["PMID:11377794","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions","termid":"GO:0000375"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01517":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA splicing, via transesterification reactions with guanosine as nucleophile","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000376","terms_by_termid":{"GO:0000372":null,"GO:0000376":null}}


id: PBO:0045906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB3 pseudogene 1","termid":"PBO:0045906"}


id: PBO:0078358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 4-1","termid":"PBO:0078358"}


id: PBO:0044950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 6","termid":"PBO:0044950"}


id: PBO:0057757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1915 host gene","termid":"PBO:0057757"}


id: PBO:0076010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1 pseudogene 1","termid":"PBO:0076010"}


id: PBO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidylyltransferase (predicted)","termid":"PBO:0002236"}


id: PBO:0056633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 12L","termid":"PBO:0056633"}


id: GO:1904319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle contraction involved in micturition.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18562635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction involved in micturition","termid":"GO:1904318"},{"relation_name":"negatively_regulates","term_name":"smooth muscle contraction involved in micturition","termid":"GO:0060083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle contraction involved in micturition","synonyms":[{"name":"down regulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"down regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"down regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"down-regulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"down-regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"down-regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"downregulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"downregulation of smooth muscle contraction involved in urination","type":"related"},{"name":"downregulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"inhibition of smooth muscle contraction involved in micturition","type":"narrow"},{"name":"inhibition of smooth muscle contraction involved in urination","type":"related"},{"name":"inhibition of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"negative regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"negative regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"}],"termid":"GO:1904319"}


id: PBO:0074949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 112","termid":"PBO:0074949"}


id: PBO:0069671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 948, pseudogene","termid":"PBO:0069671"}


id: GO:0018115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of cysteine to form peptidyl-S-diphytanylglycerol diether-L-cysteine.","definition_xrefs":["PMID:7797461","RESID:AA0223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine biosynthetic process from peptidyl-cysteine","synonyms":[{"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018115"}


id: GO:0007563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the emergence of an insect from a pupa-case or of a larva from an egg.","definition_xrefs":["ISBN:0198600461","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eclosion","termid":"GO:0007563"}


id: PBO:0030006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_middle_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0030006"}


id: PBO:0018077
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DCP1B","termid":"PBO:0018077"}


id: FYPO:0000563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G2 phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic G2 phase progression","synonyms":[{"name":"abnormal G2 phase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G2 phase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in G2","type":"exact"},{"name":"mitotic cell cycle progression in G2 phase: abnormal","type":"related"}],"termid":"FYPO:0000563"}


id: PBO:0048878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member D","termid":"PBO:0048878"}


id: GO:1990419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an elemental metal stimulus.","definition_xrefs":["PMID:22688007"],"gene_count":0,"genotype_count":0,"name":"obsolete response to elemental metal (obsolete GO:1990419)","synonyms":[{"name":"response to elemental metal","type":"exact"}],"termid":"GO:1990419"}


id: PR:P87234
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.09c","synonyms":[{"name":"Spom972h-gyp3","type":"exact"}],"termid":"PR:P87234"}


id: GO:0033961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-stilbene oxide + H2O = (+)-(1R,2R)-1,2-diphenylethane-1,2-diol.","definition_xrefs":["EC:3.3.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"cis-stilbene-oxide hydrolase activity","secondary_identifiers":["MetaCyc:3.3.2.9-RXN","Reactome:R-HSA-5694077","RHEA:23900"],"synonyms":[{"name":"arene-oxide hydratase activity","type":"broad"},{"name":"aryl epoxide hydrase activity","type":"broad"},{"name":"benzo(a)pyrene-4,5-epoxide hydratase activity","type":"narrow"},{"name":"benzo[a]pyrene-4,5-oxide hydratase activity","type":"narrow"},{"name":"cis-epoxide hydrolase activity","type":"related"},{"name":"epoxide hydrase activity","type":"broad"},{"name":"epoxide hydratase activity","type":"broad"},{"name":"mEH","type":"related"},{"name":"microsomal epoxide hydrase activity","type":"narrow"},{"name":"microsomal epoxide hydratase activity","type":"narrow"},{"name":"microsomal epoxide hydrolase activity","type":"narrow"}],"termid":"GO:0033961"}


id: GO:0005247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"voltage-gated monoatomic anion channel activity","termid":"GO:0008308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"voltage-gated chloride channel activity","secondary_identifiers":["Reactome:R-HSA-2744228"],"synonyms":[{"name":"voltage gated chloride channel activity","type":"exact"},{"name":"voltage-dependent chloride channel activity","type":"exact"}],"termid":"GO:0005247"}


id: PBO:0077430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 167A pseudogene 1","termid":"PBO:0077430"}


id: PBO:0050083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 3","termid":"PBO:0050083"}


id: _global:regulates_characteristic
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a process and a characteristic in which process (P) regulates characteristic (C) iff: P results in the existence of C OR affects the intensity or magnitude of C.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_characteristic","secondary_identifiers":["RO:0019000"],"termid":"_global:regulates_characteristic"}


id: GO:0051872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingosine metabolic process","termid":"GO:0006670"},{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"sphingoid catabolic process","termid":"GO:0046521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"sphingosine catabolic process","synonyms":[{"name":"(4E)-sphing-4-enine catabolic process","type":"exact"},{"name":"(4E)-sphing-4-enine catabolism","type":"exact"},{"name":"sphing-4-enine catabolic process","type":"exact"},{"name":"sphing-4-enine catabolism","type":"exact"}],"termid":"GO:0051872"}


id: GO:0051728
data:
  {"annotated_genes":["SJAG_02723","SJAG_04682","SJAG_03486","SJAG_00145","SJAG_01956","SJAG_05288","SJAG_02404","SJAG_04813","SJAG_03048","SJAG_03371","SJAG_01401","SJAG_00457","SJAG_04332","SJAG_01311","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86496,91285,105157],"is_not":false,"summary":null,"term":"GO:0051728"},{"annotations":[102754,100552,101909,105374,102067,98485,114439],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110045"},{"annotations":[112592,114301],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140648"},{"annotations":[98508,90673,101012,105159,97741],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110044"}]},"cv_name":"biological_process","definition":"The process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["GOC:ai","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"cell cycle switching","termid":"GO:0060184"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00457":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01956":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_04332":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0042061"],"synonyms":[{"name":"cell cycle switching, mitosis to meiosis","type":"narrow"},{"name":"conversion to meiosis","type":"narrow"},{"name":"conversion to meiotic cell cycle","type":"exact"},{"name":"entry into meiosis","type":"narrow"},{"name":"entry into meiotic cell cycle","type":"exact"},{"name":"initiation of meiosis","type":"narrow"},{"name":"initiation of meiotic cell cycle","type":"exact"},{"name":"meiotic entry","type":"narrow"}],"termid":"GO:0051728","terms_by_termid":{"GO:0051728":null,"GO:0110044":null,"GO:0110045":null,"GO:0140648":null}}


id: PBO:0034257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_activates","termid":"PBO:0034257"}


id: PBO:0027558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_wall_alpha-glucan_level","termid":"PBO:0027558"}


id: GO:2000397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquitin-dependent endocytosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-dependent endocytosis","termid":"GO:2000395"},{"relation_name":"positively_regulates","term_name":"ubiquitin-dependent endocytosis","termid":"GO:0070086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ubiquitin-dependent endocytosis","synonyms":[{"name":"positive regulation of ubiquitin-mediated endocytosis","type":"exact"}],"termid":"GO:2000397"}


id: PBO:0005443
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.3.2.6","termid":"PBO:0005443"}


id: PBO:0066525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 1","termid":"PBO:0066525"}


id: GO:0008991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a signal peptide from a protein precursor by a serine endopeptidase mechanism.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete serine-type signal peptidase activity (obsolete GO:0008991)","synonyms":[{"name":"serine-type signal peptidase activity","type":"exact"}],"termid":"GO:0008991"}


id: PBO:0085964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the high-frequency loss of mini-chromosomes, probably by increasing the rate of proper chromosome segregation; translated gene product of YCR041W, but not its transcript, is responsible for suppression; suppression ability of YCR041W is completely dependent on silencing protein Sir4p","termid":"PBO:0085964"}


id: PBO:0029389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029389"}


id: PBO:0054363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1756","termid":"PBO:0054363"}


id: PBO:0046883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A9, pseudogene","termid":"PBO:0046883"}


id: PBO:0061179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 9-1","termid":"PBO:0061179"}


id: PBO:0067771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 71","termid":"PBO:0067771"}


id: PBO:0040100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"artemin","termid":"PBO:0040100"}


id: PBO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.7","termid":"PBO:0005542"}


id: GO:0001826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an inner cell mass cell.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"blastocyst formation","termid":"GO:0001825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner cell mass cell differentiation","termid":"GO:0001826"}


id: PATO:0001427
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in compound by virtue of the bearer's tendency to act as a hydron donor.","definition_xrefs":["chemicool:chemicool"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acidity","termid":"PATO:0001842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compound acidity","termid":"PATO:0001427"}


id: PBO:0068739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 2, pseudogene","termid":"PBO:0068739"}


id: PBO:0030432
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_methyltransferase_activity","termid":"PBO:0030432"}


id: PBO:0076484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARBP2 pseudogene 1","termid":"PBO:0076484"}


id: PBO:0077658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 10a","termid":"PBO:0077658"}


id: GO:0038022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an odorant and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","PMID:21041441","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"olfactory receptor activity","termid":"GO:0004984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled olfactory receptor activity","synonyms":[{"name":"G-protein coupled odorant receptor activity","type":"exact"},{"name":"G-protein coupled olfactory receptor activity","type":"exact"},{"name":"odorant receptor activity, G-protein coupled","type":"narrow"},{"name":"olfactory receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0038022"}


id: PBO:0062239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BC member 1 pseudogene","termid":"PBO:0062239"}


id: PBO:0062634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 1 pseudogene","termid":"PBO:0062634"}


id: PBO:0079999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 10","termid":"PBO:0079999"}


id: PBO:0056998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 92a-1","termid":"PBO:0056998"}


id: PR:Q9P795
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- air1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein air1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.08c","synonyms":[{"name":"Spom972h-air1","type":"exact"}],"termid":"PR:Q9P795"}


id: PBO:0026860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_chromosome_arm_condensation","termid":"PBO:0026860"}


id: PBO:0051885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITCH intronic transcript 1","termid":"PBO:0051885"}


id: PBO:0077902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase gamma 1","termid":"PBO:0077902"}


id: GO:1901032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to reactive oxygen species.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to reactive oxygen species","termid":"GO:1901031"},{"relation_name":"is_a","term_name":"negative regulation of response to oxidative stress","termid":"GO:1902883"},{"relation_name":"negatively_regulates","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to reactive oxygen species","synonyms":[{"name":"down regulation of response to AOS","type":"exact"},{"name":"down regulation of response to ROI","type":"exact"},{"name":"down regulation of response to ROS","type":"exact"},{"name":"down regulation of response to active oxygen species","type":"exact"},{"name":"down regulation of response to reactive oxidative species","type":"exact"},{"name":"down regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"down regulation of response to reactive oxygen species","type":"exact"},{"name":"down-regulation of response to AOS","type":"exact"},{"name":"down-regulation of response to ROI","type":"exact"},{"name":"down-regulation of response to ROS","type":"exact"},{"name":"down-regulation of response to active oxygen species","type":"exact"},{"name":"down-regulation of response to reactive oxidative species","type":"exact"},{"name":"down-regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"down-regulation of response to reactive oxygen species","type":"exact"},{"name":"downregulation of response to AOS","type":"exact"},{"name":"downregulation of response to ROI","type":"exact"},{"name":"downregulation of response to ROS","type":"exact"},{"name":"downregulation of response to active oxygen species","type":"exact"},{"name":"downregulation of response to reactive oxidative species","type":"exact"},{"name":"downregulation of response to reactive oxygen intermediate","type":"exact"},{"name":"downregulation of response to reactive oxygen species","type":"exact"},{"name":"inhibition of response to AOS","type":"exact"},{"name":"inhibition of response to ROI","type":"exact"},{"name":"inhibition of response to ROS","type":"exact"},{"name":"inhibition of response to active oxygen species","type":"exact"},{"name":"inhibition of response to reactive oxidative species","type":"exact"},{"name":"inhibition of response to reactive oxygen intermediate","type":"exact"},{"name":"inhibition of response to reactive oxygen species","type":"narrow"},{"name":"negative regulation of response to AOS","type":"exact"},{"name":"negative regulation of response to ROI","type":"exact"},{"name":"negative regulation of response to ROS","type":"exact"},{"name":"negative regulation of response to active oxygen species","type":"exact"},{"name":"negative regulation of response to reactive oxidative species","type":"exact"},{"name":"negative regulation of response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:1901032"}


id: PBO:0035844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_arginase_activity","termid":"PBO:0035844"}


id: PBO:0058492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5687","termid":"PBO:0058492"}


id: GO:0010723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate of transcription from an RNA polymerase II promoter in response to an iron stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to iron (obsolete GO:0010723)","termid":"GO:0010723"}


id: PBO:0086911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Y' element ATP-dependent helicase","termid":"PBO:0086911"}


id: PBO:0060524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl-tRNA synthetase 1 pseudogene 2","termid":"PBO:0060524"}


id: PBO:0056111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA2 pseudogene 2","termid":"PBO:0056111"}


id: PBO:0001394
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene merge","termid":"PBO:0001394"}


id: PBO:0026901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mutation_rate","termid":"PBO:0026901"}


id: GO:0000903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the surface configuration of a cell during the vegetative growth phase. The vegetative growth phase is the growth phase during which single celled organisms reproduce by budding or other asexual methods.","definition_xrefs":["GOC:clt","GOC:go_curators","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape during vegetative growth phase (obsolete GO:0000903)","synonyms":[{"name":"cell morphogenesis during vegetative growth phase","type":"related"},{"name":"cellular morphogenesis during vegetative growth","type":"related"},{"name":"regulation of cell morphogenesis during vegetative growth phase","type":"related"}],"termid":"GO:0000903"}


id: GO:1900528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of cell shape that is involved in G1 to G0 transition.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:19366728"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape involved in G1 to G0 transition (obsolete GO:1900528)","synonyms":[{"name":"regulation of cell shape involved in G1 to G0 transition","type":"exact"},{"name":"regulation of cell shape involved in G1/G0 transition","type":"exact"},{"name":"regulation of cell shape involved in cell cycle quiescence","type":"related"},{"name":"regulation of cell shape involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of cell shape involved in stationary phase","type":"related"}],"termid":"GO:1900528"}


id: PBO:0087898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; involved in cell-type-specific transcription and pheromone response; plays a central role in the formation of both repressor and activator complexes; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087898"}


id: PBO:0088316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved membrane protein with Rossmann-like alpha/beta/alpha sandwich fold, conserved in fungi and protozoa","termid":"PBO:0088316"}


id: PBO:0066963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 265","termid":"PBO:0066963"}


id: GO:0034494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the microneme membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"microneme","termid":"GO:0020009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microneme lumen","termid":"GO:0034494"}


id: GO:0061215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephron in the mesonephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron development","termid":"GO:0061215"}


id: PBO:0064278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing J1","termid":"PBO:0064278"}


id: PBO:0110562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane myo-inositol transmembrane transporter","termid":"PBO:0110562"}


id: GO:0017080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a sodium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"sodium channel regulator activity","termid":"GO:0017080"}


id: PBO:0075552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPEG neighbor","termid":"PBO:0075552"}


id: PBO:0086345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs; acts on large and small rRNAs, on snRNA U2, and on some mRNAs; mutations in human ortholog dyskerin cause the disorder dyskeratosis congenita; small nucleolar ribonucleoprotein particles are also known as snoRNPs","termid":"PBO:0086345"}


id: PBO:0044545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAP divergent transcript","termid":"PBO:0044545"}


id: GO:0090231
data:
  {"annotated_genes":["SJAG_01297","SJAG_00883","SJAG_03681","SJAG_01679","SJAG_01837","SJAG_03327","SJAG_03353","SJAG_03126","SJAG_02169","SJAG_04259","SJAG_02451","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108069,86870,95706,110376,104361,109895,100013,103339,112004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[109900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[112783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[97449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905325"},{"annotations":[90330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"regulates","term_name":"spindle checkpoint signaling","termid":"GO:0031577"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"regulation of spindle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090231","terms_by_termid":{"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0047704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN2 pseudogene 1","termid":"PBO:0047704"}


id: PBO:0086224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a kinesin-14 heterodimeric motor with Kar3p; localizes Kar3p at mitotic spindle poles; has a structure similar to a kinesin motor domain but lacks an ATP-binding site and is catalytically inactive; binds microtubules; required for sister chromatid cohesion; VIK1 has a paralog, CIK1, that arose from the whole genome duplication","termid":"PBO:0086224"}


id: PBO:0050347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 50","termid":"PBO:0050347"}


id: FYPO:0005952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is normal (i.e. indistinguishable from wild type) in chromatin regions where RNA polymerase II actively transcribes genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:28218250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning in euchromatin","termid":"FYPO:0000857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes","synonyms":[{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005952"}


id: GO:2001123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a maltoheptaose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"maltoheptaose metabolic process","termid":"GO:2001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"maltoheptaose catabolic process","synonyms":[{"name":"maltoheptaose catabolism","type":"exact"}],"termid":"GO:2001123"}


id: PBO:0078162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 39","termid":"PBO:0078162"}


id: PBO:0085797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; conserved among S. cerevisiae strains, not conserved in closely related Saccharomyces species; protein detected via large-scale protein-protein interaction studies and enrichment-based proteogenomics; YJL199C is not an essential gene","termid":"PBO:0085797"}


id: SO:0001689
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The restriction enzyme cleavage junction on the 5' strand of the nucleotide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single_strand_restriction_enzyme_cleavage_site","termid":"SO:0001694"},{"relation_name":"part_of","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_restriction_enzyme_junction","synonyms":[{"name":"5' restriction enzyme junction","type":"exact"}],"termid":"SO:0001689"}


id: PBO:0053767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1012","termid":"PBO:0053767"}


id: PBO:0072272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 1","termid":"PBO:0072272"}


id: PBO:0042378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD209 molecule","termid":"PBO:0042378"}


id: GO:0031862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostanoid receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"prostanoid receptor binding","synonyms":[{"name":"prostanoid receptor ligand","type":"narrow"}],"termid":"GO:0031862"}


id: GO:0008752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + NAD(P)+ = FMN + NAD(P)H + H+. This reaction can utilize NADH and NADPH with similar reaction rates.","definition_xrefs":["EC:1.5.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"FMN reductase (NAD(P)H) activity","secondary_identifiers":["RHEA:21620","RHEA:21624"],"synonyms":[{"name":"FMN reductase activity","type":"broad"},{"name":"NAD(P)H dehydrogenase (FMN) activity","type":"exact"},{"name":"NAD(P)H-dependent FMN reductase activity","type":"related"},{"name":"flavin mononucleotide reductase activity","type":"related"}],"termid":"GO:0008752"}


id: GO:0050099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methyl-L-glutamate + A + H2O = L-glutamate + AH(2) + formaldehyde.","definition_xrefs":["RHEA:22572","EC:1.5.99.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylglutamate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00609","MetaCyc:METHYLGUTAMATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"N-methyl-L-glutamate:(acceptor) oxidoreductase (demethylating)","type":"related"},{"name":"N-methyl-L-glutamate:acceptor oxidoreductase (demethylating)","type":"related"},{"name":"N-methylglutamate dehydrogenase activity","type":"related"}],"termid":"GO:0050099"}


id: PBO:0027627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_plasmid_catenanes","termid":"PBO:0027627"}


id: PBO:0090116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding WD repeat protein Aip1","termid":"PBO:0090116"}


id: GO:0007155
data:
  {"annotated_genes":["SJAG_00910","SJAG_01253","SJAG_00156","SJAG_04191","SJAG_01975","SJAG_03484","SJAG_00926","SJAG_00239","SJAG_03802","SJAG_01778","SJAG_03473","SJAG_04723","SJAG_02380","SJAG_04720"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97185,102962],"is_not":false,"summary":null,"term":"GO:0007155"},{"annotations":[97764,99089,97763,99090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098609"},{"annotations":[88616,98837,112062,96924,88617,96925,112063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000128"},{"annotations":[99675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036349"},{"annotations":[95414,94703],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0022408"},{"annotations":[99676,102353],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060257"},{"annotations":[104743],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045785"},{"annotations":[104744,107480,112252,110193,101996,104867],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.","definition_xrefs":["GOC:hb","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00239":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01778":null,"SJAG_01975":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null,"SJAG_04720":null,"SJAG_04723":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098602","Wikipedia:Cell_adhesion"],"synonyms":[{"name":"cell adhesion molecule activity","type":"related"},{"name":"single organism cell adhesion","type":"related"}],"termid":"GO:0007155","terms_by_termid":{"GO:0000128":null,"GO:0007155":null,"GO:0022408":null,"GO:0036349":null,"GO:0045785":null,"GO:0060257":null,"GO:0098609":null,"GO:1900735":null}}


id: PR:O94359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC428.12c gene.","definition_xrefs":["UniProtKB:O94359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C428.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.12c","synonyms":[{"name":"Spom972h-SPBC428.12c","type":"exact"}],"termid":"PR:O94359"}


id: PBO:0059123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-P-dolichol utilization defect 1","termid":"PBO:0059123"}


id: PBO:0040094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 1","termid":"PBO:0040094"}


id: PBO:0035955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_Zeocin","termid":"PBO:0035955"}


id: PBO:0071298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 21","termid":"PBO:0071298"}


id: PBO:0078845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 1","termid":"PBO:0078845"}


id: PBO:0001598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc1 (predicted)","termid":"PBO:0001598"}


id: PBO:0053600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 629","termid":"PBO:0053600"}


id: PBO:0090341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2A","termid":"PBO:0090341"}


id: PBO:0050199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 16","termid":"PBO:0050199"}


id: PBO:0060481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 3","termid":"PBO:0060481"}


id: PBO:0028201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028201"}


id: PBO:0052254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDEL endoplasmic reticulum protein retention receptor 1","termid":"PBO:0052254"}


id: PBO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase (predicted)","termid":"PBO:0002296"}


id: PBO:0068111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 418","termid":"PBO:0068111"}


id: PBO:0052941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 25-1","termid":"PBO:0052941"}


id: PBO:0087854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator; required for the vitamin H-responsive element (VHRE) mediated induction of VHT1 (Vitamin H transporter) and BIO5 (biotin biosynthesis intermediate transporter) in response to low biotin concentrations; VHR1 has a paralog, VHR2, that arose from the whole genome duplication","termid":"PBO:0087854"}


id: PBO:0090344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp40 family DNAJ domain protein Psi1","termid":"PBO:0090344"}


id: PBO:0062488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 4","termid":"PBO:0062488"}


id: PBO:0051991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAKMIP2 antisense RNA 1","termid":"PBO:0051991"}


id: SO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_trimethylation_site","synonyms":[{"name":"H3K27 tri-methylation site","type":"exact"},{"name":"H3K27Me3","type":"related"}],"termid":"SO:0001709"}


id: PBO:0078194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-4","termid":"PBO:0078194"}


id: PBO:0077157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC/LysM-associated domain containing 2","termid":"PBO:0077157"}


id: PBO:0073177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein I","termid":"PBO:0073177"}


id: PBO:0011954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele_type","termid":"PBO:0011954"}


id: PBO:0058334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4708","termid":"PBO:0058334"}


id: PBO:0035754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_filament-based_movement","termid":"PBO:0035754"}


id: PBO:0034649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-globally_decreased_mitotic_recombination","termid":"PBO:0034649"}


id: GO:0051114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uridylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-uridine)-L-histidine (otherwise known as tau-UMP-histidine, tele-UMP-histidine) or peptidyl-3'-(phospho-5'-uridine)-L-histidine (otherwise known as pi-UMP-histidine, pros-UMP-histidine).","definition_xrefs":["RESID:AA0372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein uridylylation","termid":"GO:0018177"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine uridylylation","termid":"GO:0051114"}


id: GO:0097661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Ctf13 in S. cerevisiae.","definition_xrefs":["PMID:14747994","GOC:jd","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Ctf13 ubiquitin ligase complex","termid":"GO:0097661"}


id: PBO:0046691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETHE1 persulfide dioxygenase","termid":"PBO:0046691"}


id: GO:0102933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-4-amino-4,6-dideoxy-alpha-D-mannose + 2-oxoglutarate = GDP-4-dehydro-6-deoxy-alpha-D-mannose + L-glutamate.","definition_xrefs":["RHEA:36779","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"GDP-4-dehydro-6-deoxy-D-mannose-4-aminotransferase activity","secondary_identifiers":["MetaCyc:RXN-8953","EC:2.6.1.102"],"termid":"GO:0102933"}


id: PBO:0001704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR191","termid":"PBO:0001704"}


id: GO:1902623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil migration.","definition_xrefs":["GO_REF:0000058","PMID:1826836","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of neutrophil migration","termid":"GO:1902622"},{"relation_name":"negatively_regulates","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil migration","synonyms":[{"name":"down regulation of neutrophil migration","type":"exact"},{"name":"down-regulation of neutrophil migration","type":"exact"},{"name":"downregulation of neutrophil migration","type":"exact"},{"name":"inhibition of neutrophil migration","type":"narrow"}],"termid":"GO:1902623"}


id: PBO:0035857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_during_vegetative_growth","termid":"PBO:0035857"}


id: PBO:0080002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 11","termid":"PBO:0080002"}


id: FYPO:0007171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, and structure of the cell cortex are normal during prophase of the first meiotic nuclear division. The cell cortex is the region of a cell that lies just beneath the plasma membrane.","definition_xrefs":["PomBase:mah","GO:0005938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cortex morphology","termid":"FYPO:0001231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cortex morphology during meiotic prophase I","synonyms":[{"name":"normal cell cortex morphology during prophase I","type":"exact"},{"name":"normal cell cortex morphology during prophase of meiosis I","type":"exact"}],"termid":"FYPO:0007171"}


id: PBO:0075849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 1","termid":"PBO:0075849"}


id: PBO:0084834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein that interacts with mitochondrial RNA polymerase; interacts with an N-terminal region of mitochondrial RNA polymerase (Rpo41p) and couples RNA processing and translation to transcription","termid":"PBO:0084834"}


id: PBO:0091174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BC10 family small membrane protein, unknown biological role, human BLCAP ortholog","termid":"PBO:0091174"}


id: PBO:0110037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISG20L2 pseudogene 2","termid":"PBO:0110037"}


id: PBO:0046370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 5 (inactive)","termid":"PBO:0046370"}


id: PBO:0076478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAP binding protein","termid":"PBO:0076478"}


id: GO:0102726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-DIMBOA glucoside + H2O = H+ + DIMBOA + beta-D-glucose.","definition_xrefs":["GOC:pz","EC:3.2.1.182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"DIMBOA glucoside beta-D-glucosidase activity","secondary_identifiers":["MetaCyc:RXN-7082","RHEA:33975"],"termid":"GO:0102726"}


id: GO:0048657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an anther cell wall tapetum cell. The tapetum is a layer of cells that provides a source of nutrition for the pollen grains as they mature.","definition_xrefs":["GOC:sm","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"anther wall tapetum formation","termid":"GO:0048656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum cell differentiation","synonyms":[{"name":"tapetal cell differentiation","type":"broad"}],"termid":"GO:0048657"}


id: GO:0038079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein + ATP = protein phosphate + ADP by a mitogen-activated protein kinase, as part of a MAPK signaling cascade that passes on a signal within an osmosensory signaling pathway.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase activity involved in osmosensory signaling pathway (obsolete GO:0038079)","synonyms":[{"name":"MAP kinase activity involved in osmosensory signalling pathway","type":"exact"},{"name":"MAPK activity involved in osmosensory signaling pathway","type":"exact"}],"termid":"GO:0038079"}


id: FYPO:0001794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to purvalanol A","synonyms":[{"name":"normal RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"normal RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"normal transcript level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001794"}


id: FYPO:0004935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during exit from mitosis is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during exit from mitosis","synonyms":[{"name":"decreased RNA accumulation during exit from mitosis","type":"related"},{"name":"decreased RNA level during exit from mitosis during mitotic cell cycle","type":"exact"},{"name":"decreased RNA level during exit from mitosis during vegetative growth","type":"exact"},{"name":"decreased RNA level during mitotic M/G1 transition","type":"related"},{"name":"decreased RNA level during mitotic exit","type":"exact"},{"name":"decreased transcript level during exit from mitosis","type":"exact"},{"name":"reduced RNA level during exit from mitosis","type":"exact"}],"termid":"FYPO:0004935"}


id: PBO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 3","termid":"PBO:0046140"}


id: GO:0014001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sclerenchyma cell. A sclerenchyma cell is a plant cell with thick lignified walls, normally dead at maturity and specialized for structural strength. Includes fiber cells, that are greatly elongated; and sclereids, that are more isodiametric. Intermediate types exist. Cells may or may not be devoid of protoplasm at maturity. Cell form and size are variable.","definition_xrefs":["GOC:ef","GOC:jid","PO:0000077","CL:0000276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sclerenchyma cell differentiation","termid":"GO:0014001"}


id: SO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon with the DNA sequence TAG.","direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon","termid":"SO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amber_stop_codon","synonyms":[{"name":"Amber stop codon","type":"exact"}],"termid":"SO:0002333"}


id: PBO:0005530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin/PY protein 2","termid":"PBO:0005530"}


id: SO:1001269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-canonical start codon with 4 base pairs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_canonical_start_codon","termid":"SO:0000680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four_bp_start_codon","synonyms":[{"name":"4bp start codon","type":"exact"},{"name":"four bp start codon","type":"exact"}],"termid":"SO:1001269"}


id: GO:0018819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lactoyl-CoA = acryloyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.54","RHEA:34691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"lactoyl-CoA dehydratase activity","secondary_identifiers":["MetaCyc:RXN-781","MetaCyc:LACTOYL-COA-DEHYDRATASE-RXN","UM-BBD_reactionID:r0086"],"synonyms":[{"name":"acrylyl coenzyme A hydratase activity","type":"related"},{"name":"lactoyl coenzyme A dehydratase activity","type":"related"},{"name":"lactoyl-CoA hydro-lyase (acryloyl-CoA-forming)","type":"related"},{"name":"lactoyl-CoA hydro-lyase activity","type":"related"},{"name":"lactyl CoA dehydratase activity","type":"related"},{"name":"lactyl-coenzyme A dehydrase activity","type":"related"}],"termid":"GO:0018819"}


id: PBO:0043668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10B","termid":"PBO:0043668"}


id: PBO:0080741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWTR1 intronic transcript 1","termid":"PBO:0080741"}


id: PBO:0065067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein HaeIII subfamily 1","termid":"PBO:0065067"}


id: SO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the nuclear rim.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"nuclear_rim_localization_signal","secondary_identifiers":["PMID:16027110"],"synonyms":[{"name":"nuclear rim localization signal","type":"related"}],"termid":"SO:0001534"}


id: PBO:0028693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_repeat_element_RNA_level","termid":"PBO:0028693"}


id: PBO:0063046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralemmin 2","termid":"PBO:0063046"}


id: GO:0044141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the symbiont's progression from an initial condition to a later condition, on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of development of symbiont on or near host surface (obsolete GO:0044141)","termid":"GO:0044141"}


id: PR:O14339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1701 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L17-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.04","synonyms":[{"name":"Spom972h-rpl1701","type":"exact"}],"termid":"PR:O14339"}


id: GO:0060757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior by which an adult locates food.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult foraging behavior","termid":"GO:0060757"}


id: PBO:0085712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in spore wall assembly; shares similarity with Lds1p and Lds2p and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants; identified in a screen for mutants with increased levels of rDNA transcription; green fluorescent protein (GFP)-fusion protein localizes to lipid particles; protein abundance increases in response to DNA replication stress","termid":"PBO:0085712"}


id: PBO:0091068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ermes regulator Emr1","termid":"PBO:0091068"}


id: SO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding an shRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shRNA_primary_transcript","synonyms":[{"name":"shRNA primary transcript","type":"exact"}],"termid":"SO:0002038"}


id: PBO:0058370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4742","termid":"PBO:0058370"}


id: PBO:0045048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLC1 Rho GTPase activating protein","termid":"PBO:0045048"}


id: GO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + H2O + NAD+ = pyruvate + NH3 + NADH + H+.","definition_xrefs":["EC:1.4.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alanine dehydrogenase activity","secondary_identifiers":["MetaCyc:ALANINE-DEHYDROGENASE-RXN","RHEA:18405"],"synonyms":[{"name":"AlaDH","type":"related"},{"name":"L-alanine dehydrogenase activity","type":"related"},{"name":"L-alanine:NAD+ oxidoreductase (deaminating)","type":"related"},{"name":"NAD-dependent alanine dehydrogenase activity","type":"related"},{"name":"NAD-linked alanine dehydrogenase activity","type":"related"},{"name":"NADH-dependent alanine dehydrogenase activity","type":"related"},{"name":"alanine oxidoreductase activity","type":"related"},{"name":"alpha-alanine dehydrogenase activity","type":"related"}],"termid":"GO:0000286"}


id: GO:0018720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenol + X-phosphate = XH + phenylphosphate.","definition_xrefs":["PMID:16980461","UM-BBD_reactionID:r0155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"phenol kinase activity","secondary_identifiers":["MetaCyc:PHENOLPHOS-RXN"],"termid":"GO:0018720"}


id: PBO:0074749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 108","termid":"PBO:0074749"}


id: GO:2000704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0045743"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000702"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"positive regulation of FGF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"positive regulation of FGF receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"positive regulation of FGFR signaling pathway of ureteric bud formation","type":"exact"},{"name":"positive regulation of fibroblast growth factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"positive regulation of fibroblast growth factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000704"}


id: GO:0052393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by host of symbiont defense response (obsolete GO:0052393)","synonyms":[{"name":"activation of symbiont defense response","type":"exact"}],"termid":"GO:0052393"}


id: PBO:0051506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKBKB divergent transcript","termid":"PBO:0051506"}


id: PBO:0075459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA8 antisense RNA 1 (head to head)","termid":"PBO:0075459"}


id: PBO:0054252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1635","termid":"PBO:0054252"}


id: PATO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000093 chemical sensitivity (obsolete PATO:0000093)","termid":"PATO:0000093"}


id: PBO:0051509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase regulatory subunit gamma","termid":"PBO:0051509"}


id: PBO:0038785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylphosphatase 1","termid":"PBO:0038785"}


id: PBO:0040148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH1 like histone lysine methyltransferase","termid":"PBO:0040148"}


id: PR:Q10093
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.14c gene.","definition_xrefs":["UniProtKB:Q10093","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.14c","synonyms":[{"name":"Spom972h-SPAC11D3.14c","type":"exact"}],"termid":"PR:Q10093"}


id: GO:0045291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of two independently transcribed RNAs, where the one that provides the 5' portion of the final mRNA is from a splice leader RNA (SL-RNA). The SL-RNA, or mini-exon donor sequence, is added to the 5'-end of the acceptor RNA molecule which provides the mRNA body.","definition_xrefs":["ISBN:0879695897","GOC:krc","PMID:2675423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA trans splicing, via spliceosome","termid":"GO:0000365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mRNA trans splicing, SL addition","synonyms":[{"name":"nuclear mRNA trans splicing, SL addition","type":"exact"},{"name":"nuclear mRNA trans splicing, spliced leader addition","type":"exact"}],"termid":"GO:0045291"}


id: PBO:0028057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_linear_element_morphology","termid":"PBO:0028057"}


id: PBO:0046152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosome-lysosome associated apoptosis and autophagy regulator family member 2","termid":"PBO:0046152"}


id: PBO:0025520
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by A. thaliana cdc2bAt","termid":"PBO:0025520"}


id: PBO:0075201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 13","termid":"PBO:0075201"}


id: PBO:0056541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF.2 cell line derived transforming sequence like","termid":"PBO:0056541"}


id: PBO:0062513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily J member 2 (gene/pseudogene)","termid":"PBO:0062513"}


id: GO:0005483
data:
  {"annotated_genes":["SJAG_04909"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96871],"is_not":false,"summary":null,"term":"GO:0005483"}]},"cv_name":"molecular_function","definition":"Binding to both N-ethylmaleimide-sensitive fusion protein (NSF) and a cis-SNARE complex (i.e. a SNARE complex in which all proteins are associated with the same membrane) and increasing the ATPase activity of NSF, thereby allowing ATP hydrolysis by NSF to disassemble the cis-SNARE complex.","definition_xrefs":["PMID:14570579","PMID:15556857","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"soluble NSF attachment protein activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SNAP","type":"exact"}],"termid":"GO:0005483","terms_by_termid":{"GO:0005483":null}}


id: PBO:0068459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 35, pseudogene","termid":"PBO:0068459"}


id: FYECO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which rhodamine-phalloidin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000156 rhodamine-phalloidin added (obsolete FYECO:0000156)","synonyms":[{"name":"rhodamine phalloidin","type":"exact"}],"termid":"FYECO:0000156"}


id: GO:1902288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to oomycetes.","definition_xrefs":["PMID:16040633","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to oomycetes","termid":"GO:0002229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to oomycetes","termid":"GO:1902288"}


id: GO:0050632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,8,12-trimethyltridecanoyl-CoA + propanoyl-CoA = 3-oxopristanoyl-CoA + CoA.","definition_xrefs":["RHEA:10408","EC:2.3.1.176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"propionyl-CoA C2-trimethyltridecanoyltransferase activity","secondary_identifiers":["GO:0004770","KEGG_REACTION:R05330","Reactome:R-HSA-192341","Reactome:R-HSA-193533","Reactome:R-HSA-2066781","MetaCyc:2.3.1.154-RXN","Reactome:R-HSA-390224"],"synonyms":[{"name":"3-oxopristanoyl-CoA hydrolase activity","type":"related"},{"name":"3-oxopristanoyl-CoA thiolase activity","type":"related"},{"name":"4,8,12-trimethyltridecanoyl-CoA:propanoyl-CoA 2-C-4,8,12-trimethyltridecanoyltransferase activity","type":"related"},{"name":"4,8,12-trimethyltridecanoyl-CoA:propanoyl-CoA C2-4,8,12-trimethyltridecanoyltransferase activity","type":"related"},{"name":"SCPx","type":"related"},{"name":"oxopristanoyl-CoA thiolase activity","type":"related"},{"name":"peroxisomal 3-oxoacyl coenzyme A thiolase","type":"narrow"},{"name":"peroxisome sterol carrier protein thiolase","type":"narrow"},{"name":"propionyl-CoA C(2)-trimethyltridecanoyltransferase activity","type":"exact"},{"name":"sterol carrier protein","type":"related"},{"name":"sterol carrier protein X-related thiolase activity","type":"related"}],"termid":"GO:0050632"}


id: PBO:0079088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-1","termid":"PBO:0079088"}


id: FYPO:0006245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation is decreased over medium (90-940 kb) ranges within a chromosome arm.","definition_xrefs":["PMID:28825727","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased medium range intra-arm mitotic chromosome condensation during interphase (obsolete FYPO:0006245)","synonyms":[{"name":"decreased medium range intra-arm chromosome condensation during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased medium range intra-arm chromosome condensation during mitotic interphase","type":"exact"},{"name":"decreased medium range intra-arm mitotic chromosome condensation during interphase during vegetative growth","type":"exact"},{"name":"reduced medium range intra-arm mitotic chromosome condensation during interphase","type":"exact"}],"termid":"FYPO:0006245"}


id: GO:0047011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantolactone + NADP+ = 2-dehydropantolactone + NADPH + H+. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NADP+.","definition_xrefs":["EC:1.1.1.168","MetaCyc:1.1.1.168-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-dehydropantolactone reductase activity","termid":"GO:0036441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-dehydropantolactone reductase (A-specific) activity","synonyms":[{"name":"(R)-pantolactone:NADP+ oxidoreductase (A-specific)","type":"related"},{"name":"2-dehydropantoyl-lactone reductase (A-specific) activity","type":"related"},{"name":"2-ketopantoyl lactone reductase activity","type":"broad"},{"name":"2-oxopantoyl lactone reductase","type":"broad"},{"name":"ketopantoyl lactone reductase activity","type":"broad"}],"termid":"GO:0047011"}


id: PBO:0083036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta(9) fatty acid desaturase; required for monounsaturated fatty acid synthesis and for normal distribution of mitochondria","termid":"PBO:0083036"}


id: PBO:0059108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORN repeat containing 4","termid":"PBO:0059108"}


id: GO:0032516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a phosphoprotein phosphatase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"},{"relation_name":"is_a","term_name":"positive regulation of protein dephosphorylation","termid":"GO:0035307"},{"relation_name":"is_a","term_name":"regulation of phosphoprotein phosphatase activity","termid":"GO:0043666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphoprotein phosphatase activity","secondary_identifiers":["GO:0032514","GO:0034049"],"synonyms":[{"name":"activation of calcineurin activity","type":"narrow"},{"name":"activation of phosphoprotein phosphatase activity","type":"narrow"},{"name":"activation of protein phosphatase 3 activity","type":"related"},{"name":"activation of protein phosphatase type 2A activity","type":"narrow"},{"name":"activation of protein phosphatase type 2B activity","type":"narrow"},{"name":"calcineurin activation","type":"narrow"},{"name":"positive regulation of calcineurin activity","type":"narrow"},{"name":"positive regulation of protein phosphatase 2 activity","type":"related"},{"name":"positive regulation of protein phosphatase 3 activity","type":"related"},{"name":"positive regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"positive regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"stimulation of phosphoprotein phosphatase activity","type":"narrow"},{"name":"stimulation of protein phosphatase 2 activity","type":"related"},{"name":"stimulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"stimulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"up regulation of calcineurin activity","type":"narrow"},{"name":"up regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"up regulation of protein phosphatase 2 activity","type":"related"},{"name":"up regulation of protein phosphatase 3 activity","type":"related"},{"name":"up regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"up regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"up-regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"up-regulation of protein phosphatase 2 activity","type":"related"},{"name":"up-regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"up-regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"upregulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"upregulation of protein phosphatase 2 activity","type":"related"},{"name":"upregulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"upregulation of protein phosphatase type 2B activity","type":"narrow"}],"termid":"GO:0032516"}


id: PBO:0048250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 13","termid":"PBO:0048250"}


id: PBO:0043101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 13","termid":"PBO:0043101"}


id: SO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of sequence from the HERV family of mobile elements with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"Endogenous_Retrovirus_LTR_retrotransposon","termid":"SO:0002268"},{"relation_name":"is_a","term_name":"mobile_element_insertion","termid":"SO:0001837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV_insertion","synonyms":[{"name":"HERV insertion","type":"exact"}],"termid":"SO:0002187"}


id: PBO:0046602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 4","termid":"PBO:0046602"}


id: PBO:0088400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOR signalling network scaffold, leucine-rich repeat protein Sog2","termid":"PBO:0088400"}


id: PBO:0084133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexose transporter with moderate affinity for glucose; induced in the presence of non-fermentable carbon sources, induced by a decrease in growth rate, contains an extended N-terminal domain relative to other HXTs; HXT5 has a paralog, HXT3, that arose from the whole genome duplication","termid":"PBO:0084133"}


id: GO:0140487
data:
  {"annotated_genes":["SJAG_01078","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89900,89901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140486"}]},"cv_name":"molecular_function","definition":"Binding to a metal ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:12050156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140313"}],"interesting_parent_ids":["GO:0003674","GO:0140313"],"is_obsolete":false,"name":"metal ion sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140487","terms_by_termid":{"GO:0140486":null}}


id: PBO:0031812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_biofilm_formation","termid":"PBO:0031812"}


id: PBO:0003743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human c19orf29 ortholog","termid":"PBO:0003743"}


id: GO:0046021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter during mitotic cell cycle (obsolete GO:0046021)","synonyms":[{"name":"mitotic regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of transcription from Pol II promoter, mitotic","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"}],"termid":"GO:0046021"}


id: SO:0001473
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the pri miRNA that base pairs with the guide to form the hairpin.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA_primary_transcript_region","termid":"SO:0001243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_antiguide","synonyms":[{"name":"miRNA antiguide ","type":"exact"},{"name":"miRNA passenger strand","type":"exact"},{"name":"miRNA star","type":"exact"}],"termid":"SO:0001473"}


id: GO:0045641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of basophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte differentiation","termid":"GO:0030853"},{"relation_name":"is_a","term_name":"regulation of basophil differentiation","termid":"GO:0045640"},{"relation_name":"negatively_regulates","term_name":"basophil differentiation","termid":"GO:0030221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of basophil differentiation","synonyms":[{"name":"down regulation of basophil differentiation","type":"exact"},{"name":"down-regulation of basophil differentiation","type":"exact"},{"name":"downregulation of basophil differentiation","type":"exact"},{"name":"inhibition of basophil differentiation","type":"narrow"}],"termid":"GO:0045641"}


id: PBO:0109386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 17A","termid":"PBO:0109386"}


id: GO:0003913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA.","definition_xrefs":["GOC:mah","PMID:11124949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"DNA photolyase activity","secondary_identifiers":["MetaCyc:DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN"],"termid":"GO:0003913"}


id: PR:O94561
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bcp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin C1773.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.02c","synonyms":[{"name":"Spom972h-bcp1","type":"exact"},{"name":"nTPx (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear thiol peroxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thioredoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94561"}


id: PBO:0003708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 2 (predicted)","termid":"PBO:0003708"}


id: PBO:0070523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 22","termid":"PBO:0070523"}


id: PBO:0061315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPHS2 stomatin family member, podocin","termid":"PBO:0061315"}


id: PBO:0069684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 961, pseudogene","termid":"PBO:0069684"}


id: GO:0035642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H3)-arginine (position 17) = S-adenosyl-L-homocysteine + (histone H3)-N-methyl-arginine (position 17). This reaction is the addition of a methyl group to the arginine residue at position 17 of histone H3.","definition_xrefs":["GOC:sp","PMID:11341840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016741","GO:0140096","GO:0003824","GO:0016740","GO:0008276","GO:0003674"],"is_obsolete":false,"name":"histone H3R17 methyltransferase activity","synonyms":[{"name":"histone methylase activity (H3-R17 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-R17 specific)","type":"exact"},{"name":"histone-H3R17 methyltransferase activity","type":"exact"},{"name":"histone-arginine N-methyltransferase activity (H3-R17 specific)","type":"exact"}],"termid":"GO:0035642"}


id: PBO:0057877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3181","termid":"PBO:0057877"}


id: PBO:0051140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-16 (non-functional)","termid":"PBO:0051140"}


id: PBO:0050766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 28","termid":"PBO:0050766"}


id: PBO:0071140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 3","termid":"PBO:0071140"}


id: _global:has_pathogen
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"host_of","termid":"_global:host_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_pathogen","secondary_identifiers":["RO:0002557"],"termid":"_global:has_pathogen"}


id: GO:0103116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactofuranose + ATP + H2O = alpha-D-galactofuranose + hydrogenphosphate + ADP + H+.","definition_xrefs":["PMID:19744923","GOC:pz","RHEA:61716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transporter activity","termid":"GO:0005354"},{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type D-galactofuranose transporter","secondary_identifiers":["EC:7.5.2.9","MetaCyc:TRANS-RXN-333"],"synonyms":[{"name":"ATP-dependent alpha-D-galactofuranose transporter activity","type":"exact"},{"name":"ATPase-coupled alpha-D-galactofuranose transporter activity","type":"related"},{"name":"alpha-D-galactofuranose transporter activity","type":"exact"}],"termid":"GO:0103116"}


id: PBO:0073991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 5","termid":"PBO:0073991"}


id: PBO:0005106
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degradation required to stabilize Bqt4 in the nuclear membrane","termid":"PBO:0005106"}


id: GO:0061062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode larval development","termid":"GO:0061062"}


id: PBO:0055871
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC2 antisense RNA 1","termid":"PBO:0055871"}


id: GO:0009954
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end).","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation","synonyms":[{"name":"proximal/distal pattern specification","type":"narrow"}],"termid":"GO:0009954"}


id: FYPO:0002811
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id: PBO:0078744
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 6 non-catalytic subunit","termid":"PBO:0078744"}


id: GO:0022024
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id: PBO:0077778
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 70","termid":"PBO:0077778"}


id: GO:0016407
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id: PBO:0064993
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id: PBO:0065386
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC4 and SRSF1 interacting protein 1","termid":"PBO:0065386"}


id: PBO:0075641
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SprT-like N-terminal domain","termid":"PBO:0075641"}


id: PBO:0033756
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spindle_pole_body","termid":"PBO:0033756"}


id: GO:0002256
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id: PBO:0075362
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX2 overlapping transcript","termid":"PBO:0075362"}


id: RO:HOM0000052
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  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Peramorphosis that is produced by a delay in the offset of development.","definition_xrefs":["ISBN:978-0674639416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_peramorphosis_relationship_with","termid":"RO:HOM0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_hypermorphosis_relationship_with","termid":"RO:HOM0000052"}


id: GO:0046682
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclodiene stimulus. A cyclodiene is any organic insecticide (as dieldrin or chlordane) with a chlorinated methylene group forming a bridge across a 6-membered carbon ring.","definition_xrefs":["ISBN:0877797099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclodiene","synonyms":[{"name":"cyclodiene resistance","type":"related"},{"name":"cyclodiene susceptibility/resistance","type":"related"}],"termid":"GO:0046682"}


id: PBO:0087117
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome biogenesis factor required for maturation of 18S rRNA; null mutant is sensitive to hydroxyurea and is delayed in recovering from alpha-factor arrest; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus","termid":"PBO:0087117"}


id: PBO:0090880
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cruciform-cutting endonuclease Cce1","termid":"PBO:0090880"}


id: GO:2000238
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id: GO:0051129
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regulation of cellular component organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell organization","type":"exact"},{"name":"down-regulation of cell organization","type":"exact"},{"name":"downregulation of cell organization","type":"exact"},{"name":"inhibition of cell organization","type":"narrow"},{"name":"negative regulation of cell organisation","type":"related"},{"name":"negative regulation of cellular component organization and biogenesis","type":"related"}],"termid":"GO:0051129","terms_by_termid":{"GO:0007094":null,"GO:0010637":null,"GO:0010974":null,"GO:0031030":null,"GO:0034316":null,"GO:0042989":null,"GO:0045128":null,"GO:0045806":null,"GO:0045841":null,"GO:0045875":null,"GO:0051016":null,"GO:0051598":null,"GO:0060906":null,"GO:0061188":null,"GO:0061192":null,"GO:0090258":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1903500":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905412":null,"GO:1905560":null,"GO:1905757":null,"GO:2000816":null}}


id: PBO:0064552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 14, pseudogene","termid":"PBO:0064552"}


id: GO:1990617
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex that is composed of CHOP (C/EBP homology protein, GADD153) and ATF4 (activating transcription factor 4, also known as cAMP response element binding protein-2/CREB-2) subunits.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:18940792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"CHOP-ATF4 complex","synonyms":[{"name":"ATF4-CHOP heterodimer","type":"exact"},{"name":"CHOP-ATF4 heterodimer","type":"exact"},{"name":"CHOP-CREB-2 complex","type":"exact"},{"name":"CHOP/ATF4 complex","type":"exact"},{"name":"GADD153-ATF4 complex","type":"exact"}],"termid":"GO:1990617"}


id: PR:O94502
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 41 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C12D12.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.05c","secondary_identifiers":["UniProtKB:O94502"],"synonyms":[{"name":"Spom972h-SLC25A41","type":"exact"}],"termid":"PR:O94502"}


id: GO:0044321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptin stimulus. Leptin is a hormone manufactured primarily in the adipocytes of white adipose tissue, and the level of circulating leptin is directly proportional to the total amount of fat in the body. It plays a key role in regulating energy intake and energy expenditure, including appetite and metabolism].","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to leptin","synonyms":[{"name":"response to leptin stimulus","type":"exact"}],"termid":"GO:0044321"}


id: GO:0038140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex between the tyrosine kinase receptors ERBB4 (also called HER4) and ERBB3 (also called HER3). ERBB3 has impaired kinase activity so relies on the kinase activity of its heterodimer partner for activation and signal transmission.","definition_xrefs":["PMID:16460914","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"ERBB4-ERBB3 complex","synonyms":[{"name":"ERBB3-ERBB4 complex","type":"exact"},{"name":"ERBB4:ERBB3 heterodimer","type":"exact"}],"termid":"GO:0038140"}


id: PBO:0068533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 134, pseudogene","termid":"PBO:0068533"}


id: FYPO:0005782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer mitotic checkpoint complexes than normal.","definition_xrefs":["GO:0033597","PomBase:mah","PMID:26882497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitotic checkpoint complex level","synonyms":[{"name":"decreased MCC level","type":"related"},{"name":"decreased mitotic checkpoint complex level during mitotic cell cycle","type":"related"},{"name":"decreased mitotic checkpoint complex level during vegetative growth","type":"exact"},{"name":"mitotic checkpoint complexes present at decreased level","type":"exact"},{"name":"reduced mitotic checkpoint complex level","type":"exact"}],"termid":"FYPO:0005782"}


id: PBO:0061422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide Y receptor Y6 (pseudogene)","termid":"PBO:0061422"}


id: GO:0032824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell activation","termid":"GO:0032815"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte differentiation","termid":"GO:0045620"},{"relation_name":"negatively_regulates","term_name":"natural killer cell differentiation","termid":"GO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell differentiation","synonyms":[{"name":"down regulation of natural killer cell differentiation","type":"exact"},{"name":"down-regulation of natural killer cell differentiation","type":"exact"},{"name":"downregulation of natural killer cell differentiation","type":"exact"},{"name":"inhibition of natural killer cell differentiation","type":"narrow"},{"name":"negative regulation of NK cell differentiation","type":"exact"},{"name":"negative regulation of natural killer cell development","type":"related"}],"termid":"GO:0032824"}


id: PR:P78774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2/3 complex subunit 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2/3 complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.06","secondary_identifiers":["UniProtKB:P78774"],"synonyms":[{"name":"Spom972h-ARPC1A","type":"exact"},{"name":"arp2/3 complex 41 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p41-ARC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78774"}


id: PBO:0080005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 divergent transcript","termid":"PBO:0080005"}


id: GO:0098801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a system process, a multicellular organismal process carried out by the renal system.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"renal system process","termid":"GO:0003014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of renal system process","termid":"GO:0098801"}


id: PBO:0049372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 2","termid":"PBO:0049372"}


id: PBO:0071947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4 Y-linked 1","termid":"PBO:0071947"}


id: FYPO:0005441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more microtubules does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during vegetative growth","termid":"FYPO:0003269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to microtubule during mitotic interphase","synonyms":[{"name":"abolished protein localisation to microtubule during mitotic interphase","type":"exact"},{"name":"abolished protein localization to microtubule during interphase during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to microtubule during mitotic interphase during vegetative growth","type":"exact"},{"name":"protein absent from microtubule during mitotic interphase","type":"related"},{"name":"protein localization to microtubule abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0005441"}


id: PBO:0016534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub2","termid":"PBO:0016534"}


id: PBO:0108898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 11","termid":"PBO:0108898"}


id: GO:0023060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is released and/or conveyed from one location to another.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission (obsolete GO:0023060)","synonyms":[{"name":"signal transmission","type":"exact"}],"termid":"GO:0023060"}


id: PBO:0046088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 13","termid":"PBO:0046088"}


id: GO:0062026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate, frequency or extent of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, the chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.","definition_xrefs":["PMID:28007894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032435"},{"relation_name":"is_a","term_name":"regulation of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0062025"},{"relation_name":"negatively_regulates","term_name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0031146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process","termid":"GO:0062026"}


id: GO:0160008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[protein] = (2E)-2-butenoate + L-lysyl-[protein].","definition_xrefs":["PMID:30279482","PMID:28497810","PMID:34608293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"protein decrotonylase activity","secondary_identifiers":["RHEA:69172"],"termid":"GO:0160008"}


id: FYPO:0005874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of medial membrane band assembly is decreased. Medial membrane band assembly is the assembly of a sterol-rich region of the plasma membrane at the cell surface overlying the contractile ring.","definition_xrefs":["GO:0032130","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000032"],"is_obsolete":false,"name":"decreased rate of medial membrane band assembly","synonyms":[{"name":"decreased rate of medial membrane band assembly during mitotic cell cycle","type":"related"},{"name":"decreased rate of medial membrane band assembly during vegetative growth","type":"exact"},{"name":"decreased rate of medial membrane band formation","type":"exact"},{"name":"reduced rate of medial membrane band assembly","type":"exact"}],"termid":"FYPO:0005874"}


id: PBO:0003156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfiredoxin","termid":"PBO:0003156"}


id: PBO:0088832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate (Pi) transmembrane transporter Plt1","termid":"PBO:0088832"}


id: PBO:0076704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF4 antisense RNA 1","termid":"PBO:0076704"}


id: PBO:0090492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane anchored protein, claudin family, predicted membrane sensor Mac1","termid":"PBO:0090492"}


id: PBO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome c oxidase assembly Cox16 (predicted)","termid":"PBO:0001931"}


id: FYPO:0004233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but its occurrence is decreased and begins later than normal.","definition_xrefs":["PMID:21118960","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","termid":"FYPO:0000712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"decreased and delayed cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"decreased and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"decreased and delayed mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"decreased and delayed mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"decreased and delayed nitrogen deprivation-induced G1 arrest","type":"exact"},{"name":"reduced and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0004233"}


id: GO:0061754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the quantity of fibrinogen circulating in the bloodstream.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:20570858","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circulating fibrinogen levels","termid":"GO:0044537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circulating fibrinogen levels","termid":"GO:0061754"}


id: FYPO:0000084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 6-azauracil. Cells stop growing (and may die) at a concentration of 6-azauracil that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to 6-azauracil","synonyms":[{"name":"hypersensitive to 6-azauracil","type":"exact"},{"name":"sensitive to 6-azauracil during mitotic cell cycle","type":"related"},{"name":"sensitive to 6-azauracil during vegetative growth","type":"exact"}],"termid":"FYPO:0000084"}


id: PBO:0064991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photoreceptor disc component","termid":"PBO:0064991"}


id: PBO:0081887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 837","termid":"PBO:0081887"}


id: GO:1900203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of spread of virus in host, cell to cell.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of spread of virus in host, cell to cell (obsolete GO:1900203)","synonyms":[{"name":"activation of cell to cell spread of virus within host","type":"exact"},{"name":"activation of spread of virus in host, cell to cell","type":"narrow"},{"name":"activation of spread of virus within host, cell to cell","type":"exact"},{"name":"activation of viral spread within host, cell to cell","type":"exact"},{"name":"positive regulation of cell to cell spread of virus within host","type":"exact"},{"name":"positive regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"positive regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"positive regulation of viral spread within host, cell to cell","type":"exact"},{"name":"up regulation of cell to cell spread of virus within host","type":"exact"},{"name":"up regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"up regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"up regulation of viral spread within host, cell to cell","type":"exact"},{"name":"up-regulation of cell to cell spread of virus within host","type":"exact"},{"name":"up-regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"up-regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"up-regulation of viral spread within host, cell to cell","type":"exact"},{"name":"upregulation of cell to cell spread of virus within host","type":"exact"},{"name":"upregulation of spread of virus in host, cell to cell","type":"exact"},{"name":"upregulation of spread of virus within host, cell to cell","type":"exact"},{"name":"upregulation of viral spread within host, cell to cell","type":"exact"}],"termid":"GO:1900203"}


id: GO:0044489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:fj","PMID:21781281","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function in another organism","termid":"GO:0044362"},{"relation_name":"is_a","term_name":"modulation of voltage-gated sodium channel activity in another organism","termid":"GO:0044488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of voltage-gated sodium channel activity in another organism","synonyms":[{"name":"negative regulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044489"}


id: GO:0009792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell.","definition_xrefs":["GOC:mtg_sensu","GOC:isa_complete","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo development ending in birth or egg hatching","synonyms":[{"name":"embryogenesis","type":"broad"}],"termid":"GO:0009792"}


id: GO:0008490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arsenite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsenite transmembrane transporter activity","termid":"GO:0015105"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"arsenite secondary active transmembrane transporter activity","secondary_identifiers":["GO:0008491"],"synonyms":[{"name":"arsenite porter activity","type":"related"}],"termid":"GO:0008490"}


id: PBO:0074474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMU1 DNA replication regulator and spliceosomal factor","termid":"PBO:0074474"}


id: GO:0060261
data:
  {"annotated_genes":["SJAG_02391","SJAG_03573","SJAG_04647","SJAG_00150","SJAG_04820","SJAG_03421","SJAG_03590","SJAG_00904","SJAG_00909","SJAG_02551","SJAG_00766","SJAG_02849","SJAG_03622","SJAG_03061","SJAG_04099","SJAG_05203","SJAG_04705","SJAG_00342","SJAG_01952","SJAG_05341","SJAG_01403","SJAG_00297","SJAG_02494","SJAG_01771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83627,86519,86829,90469,90580,91513,91994,94801,95148,98076,99539,99800,101793,102144,102337,102469,104832,104859,105147,110836,111400,114998],"is_not":false,"summary":null,"term":"GO:0060261"},{"annotations":[85865,111291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dph","GOC:tb","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription initiation","termid":"GO:2000144"},{"relation_name":"positively_regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060261","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: PBO:0064859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R15B and PIK3C2B antisense RNA 1","termid":"PBO:0064859"}


id: PBO:0073910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A1 pseudogene 1","termid":"PBO:0073910"}


id: SO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with DNA.","definition_xrefs":["SO:ke","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_binding_site","termid":"SO:0001429"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_DNA_contact","synonyms":[{"name":"DNA_bind","type":"exact"},{"name":"polypeptide DNA contact","type":"exact"}],"termid":"SO:0100020"}


id: GO:0071198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP6 associated with the channel via interaction with the Kv alpha subunit 4.1.","definition_xrefs":["PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"Kv4.1-DPP6 channel complex","secondary_identifiers":["CORUM:600"],"synonyms":[{"name":"Kv4.1-DPPX channel complex","type":"exact"}],"termid":"GO:0071198"}


id: PBO:0041785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyphosine like","termid":"PBO:0041785"}


id: PBO:0052584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 2","termid":"PBO:0052584"}


id: MOD:00464
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N'-formyl-L-kynurenine.","definition_xrefs":["PubMed:12124932","PubMed:9252331","PubMed:12686488","Unimod:425#W","DeltaMass:356","OMSSA:45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N'-formyl-L-kynurenine","synonyms":[{"name":"Dioxidation","type":"related"},{"name":"Double oxidation of Trp","type":"exact"},{"name":"dihydroxy","type":"related"},{"name":"formylkynureninw","type":"exact"},{"name":"tryptophan oxidation to formylkynurenin","type":"related"}],"termid":"MOD:00464"}


id: PBO:0072708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 2B","termid":"PBO:0072708"}


id: PBO:0044899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derlin 1","termid":"PBO:0044899"}


id: GO:0072100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the ureteric bud such that there is a similar arrangement in form and relationship of parts along its anterior/posterior axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in ureteric bud development","termid":"GO:0072099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of ureteric bud anterior/posterior symmetry","synonyms":[{"name":"specification of ureteric bud anterior/posterior asymmetry","type":"exact"}],"termid":"GO:0072100"}


id: PBO:0044981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHX33 divergent transcript","termid":"PBO:0044981"}


id: GO:0031155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reproductive fruiting body development.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of reproductive fruiting body development","synonyms":[{"name":"regulation of fruiting body formation","type":"exact"}],"termid":"GO:0031155"}


id: PBO:0014296
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by N. tabacum Ran-AI","termid":"PBO:0014296"}


id: GO:0046107
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of uracil, 2,4-dioxopyrimidine, one of the pyrimidine bases occurring in RNA, but not in DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"uracil metabolic process","termid":"GO:0019860"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"uracil biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil anabolism","type":"exact"},{"name":"uracil biosynthesis","type":"exact"},{"name":"uracil formation","type":"exact"},{"name":"uracil synthesis","type":"exact"}],"termid":"GO:0046107","terms_by_termid":{"GO:0006223":null}}


id: GO:0072488
data:
  {"annotated_genes":["SJAG_04731","SJAG_04136"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95372,115067],"is_not":false,"summary":null,"term":"GO:0072488"}]},"cv_name":"biological_process","definition":"The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04136":null,"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"ammonium transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015696"],"synonyms":[{"name":"ammonia transport","type":"broad"},{"name":"ammonium membrane transport","type":"exact"},{"name":"ammonium transport","type":"broad"}],"termid":"GO:0072488","terms_by_termid":{"GO:0072488":null}}


id: GO:0102087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + L-glutamate + ATP = H+ + N-benzoyl-L-glutamate + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:6.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"N-benzoyl-L-glutamate synthetase activity","secondary_identifiers":["MetaCyc:RXN-10886"],"termid":"GO:0102087"}


id: GO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"RNA polymerase V is a multisubunit RNA polymerase complex found in the nucleus of plants and involved in accumulation of siRNAs and in DNA methylation-dependent silencing of endogenous repeated sequences. Pol V is composed of subunits that are paralogous or identical to the 12 subunits of Pol II. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The second largest subunit is also found in RNA polymerase IVa, while the largest subunit is found only in the IVa complex and contains an extended C-terminal domain (CTD) that includes multiple repeats of a 16 amino-acid consensus sequence as well as other sequences. The remainder of the complex is composed of smaller subunits.","definition_xrefs":["GOC:krc","PMID:16140984","GOC:mtg_sensu","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase V complex","secondary_identifiers":["GO:0080137"],"synonyms":[{"name":"DNA-directed RNA polymerase IVb complex","type":"exact"},{"name":"DNA-directed RNA polymerase V complex","type":"exact"}],"termid":"GO:0000419"}


id: SO:0001435
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons GCN (GCT, GCC, GCA and GCG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine","synonyms":[{"name":"A","type":"exact"},{"name":"Ala","type":"exact"}],"termid":"SO:0001435"}


id: PR:O74191
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fkbp39 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FK506-binding protein 39 kDa (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.02","synonyms":[{"name":"PPIase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Rotamase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fkbp39","type":"exact"},{"name":"peptidyl-prolyl cis-trans isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74191"}


id: GO:0080180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-methylguanosine.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"2-methylguanosine metabolic process","termid":"GO:0080180"}


id: FYPO:0003173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleotide-excision repair is abnormal. Nucleotide-excision repair is a DNA repair process in which a small region of the strand surrounding the damage is removed as an oligonucleotide, and the resulting small gap is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["GO:0006289","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA repair during vegetative growth","termid":"FYPO:0000188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0000298","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nucleotide-excision repair during vegetative growth","synonyms":[{"name":"abnormal NER during vegetative growth","type":"exact"},{"name":"abnormal excision repair during vegetative growth","type":"broad"},{"name":"abnormal nucleotide-excision repair during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003173"}


id: PBO:0042025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 83","termid":"PBO:0042025"}


id: PBO:0069597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 874, pseudogene","termid":"PBO:0069597"}


id: GO:1903787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutathione biosynthetic process.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of glutathione biosynthetic process","termid":"GO:1903786"},{"relation_name":"negatively_regulates","term_name":"glutathione biosynthetic process","termid":"GO:0006750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutathione biosynthetic process","synonyms":[{"name":"down regulation of glutathione anabolism","type":"exact"},{"name":"down regulation of glutathione biosynthesis","type":"exact"},{"name":"down regulation of glutathione biosynthetic process","type":"exact"},{"name":"down regulation of glutathione formation","type":"exact"},{"name":"down regulation of glutathione synthesis","type":"exact"},{"name":"down-regulation of glutathione anabolism","type":"exact"},{"name":"down-regulation of glutathione biosynthesis","type":"exact"},{"name":"down-regulation of glutathione biosynthetic process","type":"exact"},{"name":"down-regulation of glutathione formation","type":"exact"},{"name":"down-regulation of glutathione synthesis","type":"exact"},{"name":"downregulation of glutathione anabolism","type":"exact"},{"name":"downregulation of glutathione biosynthesis","type":"exact"},{"name":"downregulation of glutathione biosynthetic process","type":"exact"},{"name":"downregulation of glutathione formation","type":"exact"},{"name":"downregulation of glutathione synthesis","type":"exact"},{"name":"inhibition of glutathione anabolism","type":"narrow"},{"name":"inhibition of glutathione biosynthesis","type":"narrow"},{"name":"inhibition of glutathione biosynthetic process","type":"narrow"},{"name":"inhibition of glutathione formation","type":"narrow"},{"name":"inhibition of glutathione synthesis","type":"narrow"},{"name":"negative regulation of glutathione anabolism","type":"exact"},{"name":"negative regulation of glutathione biosynthesis","type":"exact"},{"name":"negative regulation of glutathione formation","type":"exact"},{"name":"negative regulation of glutathione synthesis","type":"exact"}],"termid":"GO:1903787"}


id: GO:0031084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules. The human complex contains the Hps3, Hps5, and Hps6 proteins; the mouse complex contains ru2 and ru.","definition_xrefs":["PMID:12548288","PMID:14718540","PMID:15031569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BLOC complex","termid":"GO:0031082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BLOC-2 complex","termid":"GO:0031084"}


id: PBO:0029959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ubiquinol-cytochrome-c_reductase_activity","termid":"PBO:0029959"}


id: PBO:0039285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 14, pseudogene","termid":"PBO:0039285"}


id: GO:0061144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a secondary alveolar septum over time, from its formation to the mature structure. A secondary alveolar septum is a specialized epithelium that subdivides the initial saccule.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelium development","termid":"GO:0060428"},{"relation_name":"part_of","term_name":"lung saccule development","termid":"GO:0060430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alveolar secondary septum development","termid":"GO:0061144"}


id: MOD:00650
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a myristoylamino group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoylated residue","termid":"MOD:00438"},{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-myristoylated residue","synonyms":[{"name":"NMyrRes","type":"exact"}],"termid":"MOD:00650"}


id: GO:0018209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-serine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine modification","termid":"GO:0018209"}


id: GO:0052375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism avoids the effects of nitric oxide produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance by organism of symbiont-produced nitric oxide (obsolete GO:0052375)","synonyms":[{"name":"evasion or tolerance by organism of symbiont NO","type":"exact"},{"name":"evasion or tolerance by organism of symbiont nitric oxide","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced NO","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced nitric oxide","type":"exact"},{"name":"evasion or tolerance of NO produced by symbiont in response to organism","type":"exact"},{"name":"evasion or tolerance of nitric oxide produced by symbiont in response to organism","type":"exact"}],"termid":"GO:0052375"}


id: GO:0048921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line neuromast cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cupula development","termid":"GO:0048887"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast cupula development","termid":"GO:0048921"}


id: PBO:0081796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 726","termid":"PBO:0081796"}


id: PBO:0087893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription cofactor; forms complexes with Swi4p and Mbp1p to regulate transcription at the G1/S transition; involved in meiotic gene expression; also binds Stb1p to regulate transcription at START; cell wall stress induces phosphorylation by Mpk1p, which regulates Swi6p localization; required for the unfolded protein response, independently of its known transcriptional coactivators","termid":"PBO:0087893"}


id: FYPO:0001912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ubiquitin ligase activity","synonyms":[{"name":"abnormal ubiquitin-protein ligase activity","type":"exact"}],"termid":"FYPO:0001912"}


id: PBO:0080197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 5","termid":"PBO:0080197"}


id: GO:0070257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of mucus from a cell or a tissue.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of mucus secretion","termid":"GO:0070255"},{"relation_name":"positively_regulates","term_name":"mucus secretion","termid":"GO:0070254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mucus secretion","synonyms":[{"name":"positive regulation of mucus production","type":"exact"}],"termid":"GO:0070257"}


id: PBO:0067364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 464, pseudogene","termid":"PBO:0067364"}


id: PBO:0039443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and KH domain containing 1","termid":"PBO:0039443"}


id: FYPO:0007647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus in the normal location, has no septum, and progression through the mitotic cell cycle is arrested in M phase.","definition_xrefs":["PMID:33506191","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"},{"relation_name":"is_a","term_name":"normal nucleus location","termid":"FYPO:0002070"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000004","FYPO:0000257","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell with cell cycle arrest in mitotic M phase and normal nucleus localization","synonyms":[{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest in M phase and normal nucleus localization during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell arrested in M with normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in M phase and normal nucleus localization during mitotic cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitosis and normal nucleus localization","type":"related"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nuclear localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nuclear position","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nucleus localisation","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic M phase arrest and normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest in M phase and normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic nuclear division arrest and normal nucleus localization","type":"exact"},{"name":"inviable mononucleate aseptate cell arrested in mitotic M phase without nuclear displacement","type":"exact"},{"name":"lethal; elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nucleus localization","type":"exact"},{"name":"mitotic M-phase arrested elongated inviable mononucleate aseptate vegetative cell with normal nucleus localization","type":"exact"},{"name":"mitotic cell cycle arrest in M-phase with elongated inviable mononucleate aseptate cell and normal nucleus localization","type":"exact"},{"name":"nuclear division arrest without septation (elongated cell) with normal nucleus localization","type":"exact"}],"termid":"FYPO:0007647"}


id: PBO:0085996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; shares a promoter with YNL194C; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YNL195C has a paralog, HBT1, that arose from the whole genome duplication","termid":"PBO:0085996"}


id: GO:0042353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fucose (6-deoxygalactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose metabolic process","termid":"GO:0006004"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"fucose biosynthetic process","synonyms":[{"name":"fucose anabolism","type":"exact"},{"name":"fucose biosynthesis","type":"exact"},{"name":"fucose formation","type":"exact"},{"name":"fucose synthesis","type":"exact"}],"termid":"GO:0042353"}


id: PBO:0076232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suv3 like RNA helicase","termid":"PBO:0076232"}


id: GO:0008024
data:
  {"annotated_genes":["SJAG_01213","SJAG_02057","SJAG_03967","SJAG_01149","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91933,107019,113089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[105143,104983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"}]},"cv_name":"cellular_component","definition":"A transcription elongation factor complex that facilitates the transition from abortive to productive elongation by phosphorylating the CTD domain of the large subunit of DNA-directed RNA polymerase II, holoenzyme. Contains a cyclin and a cyclin-dependent protein kinase catalytic subunit.","definition_xrefs":["GOC:vw","PMID:10766736","PMID:19328067","PMID:17079683","PMID:7759473","PMID:16721054","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"},{"relation_name":"is_a","term_name":"nuclear cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0019908"},{"relation_name":"is_a","term_name":"carboxy-terminal domain protein kinase complex","termid":"GO:0032806"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_03061":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin/CDK positive transcription elongation factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive transcription elongation factor complex b","type":"related"}],"termid":"GO:0008024","terms_by_termid":{"GO:0070691":null,"GO:0070692":null}}


id: GO:0003256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the differentiation of a myocardial precursor cell.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation (obsolete GO:0003256)","termid":"GO:0003256"}


id: PBO:0049373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 3","termid":"PBO:0049373"}


id: PBO:0081907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 865","termid":"PBO:0081907"}


id: SO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes for 2S ribosomal RNA, which functions as a component of the large subunit of the ribosome in Drosophila and at least some other Diptera.","definition_xrefs":["PMID:4847940","PMID:768488","PMID:10788608","PMID:407103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_2S_gene","synonyms":[{"name":"2S rRNA gene","type":"exact"},{"name":"rRNA 2S gene","type":"exact"}],"termid":"SO:0002336"}


id: GO:0048502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + thiamine(out) = ADP + H+ + phosphate + thiamine(in).","definition_xrefs":["PMID:12175925","RHEA:29811","PMID:9535878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine transmembrane transporter activity","termid":"GO:0015234"},{"relation_name":"is_a","term_name":"ABC-type azole transporter activity","termid":"GO:0140394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type thiamine transporter activity","secondary_identifiers":["MetaCyc:ABC-32-RXN","TC:3.A.1.19.1","GO:0015619","EC:7.6.2.15"],"synonyms":[{"name":"ATP-dependent thiamine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled thiamine transmembrane transporter activity","type":"related"},{"name":"TPP transporting ATPase activity","type":"related"},{"name":"thiamin pyrophosphate ABC transporter","type":"exact"},{"name":"thiamin pyrophosphate porter activity","type":"broad"},{"name":"thiamin pyrophosphate transporting ATPase activity","type":"related"},{"name":"thiamin-transporting ATPase activity","type":"related"},{"name":"thiamine ABC transporter","type":"exact"},{"name":"thiamine pyrophosphate-transporting ATPase activity","type":"related"},{"name":"thiamine-transporting ATPase activity","type":"related"}],"termid":"GO:0048502"}


id: PBO:0038687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTA2 antisense RNA 1","termid":"PBO:0038687"}


id: GO:0039649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host ubiquitin-protein ligase activity. Ubiquitin-protein ligase activity catalyzes the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.","definition_xrefs":["UniProtKB-KW:KW-1123"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host ubiquitin-protein ligase activity (obsolete GO:0039649)","synonyms":[{"name":"modulation of host E3 ubiquitin ligases by virus","type":"narrow"}],"termid":"GO:0039649"}


id: GO:0005254
data:
  {"annotated_genes":["SJAG_01168"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107771],"is_not":false,"summary":null,"term":"GO:0005254"}]},"cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a chloride ion through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01168":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"chloride channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-427570","Reactome:R-HSA-2744349","Reactome:R-HSA-9712204","Reactome:R-HSA-975340","Reactome:R-HSA-975449"],"termid":"GO:0005254","terms_by_termid":{"GO:0005254":null}}


id: PBO:0072582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 1","termid":"PBO:0072582"}


id: GO:1904103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in gastrulation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24892953","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"}


id: GO:1902949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tau-protein kinase activity.","definition_xrefs":["GOC:sjp","PMID:15897157","GOC:TermGenie","GO_REF:0000059","PMID:22986780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"},{"relation_name":"is_a","term_name":"regulation of tau-protein kinase activity","termid":"GO:1902947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tau-protein kinase activity","synonyms":[{"name":"upregulation of CDK5/p23","type":"related"},{"name":"upregulation of GSK","type":"related"},{"name":"upregulation of STK31","type":"related"},{"name":"upregulation of TPK","type":"related"},{"name":"upregulation of TPK I","type":"related"},{"name":"upregulation of TPK II","type":"related"},{"name":"upregulation of TTK","type":"related"},{"name":"activation of CDK5/p23","type":"related"},{"name":"activation of GSK","type":"related"},{"name":"activation of STK31","type":"related"},{"name":"activation of TPK","type":"related"},{"name":"activation of TPK I","type":"related"},{"name":"activation of TPK II","type":"related"},{"name":"activation of TTK","type":"related"},{"name":"activation of [Tau protein] kinase activity","type":"narrow"},{"name":"activation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"activation of cdk5/p20","type":"related"},{"name":"activation of glycogen synthase kinase-3beta activity","type":"narrow"},{"name":"activation of protein tau kinase activity","type":"narrow"},{"name":"activation of tau kinase activity","type":"narrow"},{"name":"activation of tau protein kinase activity","type":"narrow"},{"name":"activation of tau-protein kinase I activity","type":"narrow"},{"name":"activation of tau-protein kinase II activity","type":"narrow"},{"name":"activation of tau-protein kinase activity","type":"narrow"},{"name":"activation of tau-tubulin kinase activity","type":"narrow"},{"name":"positive regulation of CDK5/p23","type":"related"},{"name":"positive regulation of GSK","type":"related"},{"name":"positive regulation of STK31","type":"related"},{"name":"positive regulation of TPK","type":"related"},{"name":"positive regulation of TPK I","type":"related"},{"name":"positive regulation of TPK II","type":"related"},{"name":"positive regulation of TTK","type":"related"},{"name":"positive regulation of [Tau protein] kinase activity","type":"exact"},{"name":"positive regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"positive regulation of cdk5/p20","type":"related"},{"name":"positive regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"positive regulation of protein tau kinase activity","type":"exact"},{"name":"positive regulation of tau kinase activity","type":"exact"},{"name":"positive regulation of tau protein kinase activity","type":"exact"},{"name":"positive regulation of tau-protein kinase I activity","type":"narrow"},{"name":"positive regulation of tau-protein kinase II activity","type":"narrow"},{"name":"positive regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"up regulation of CDK5/p23","type":"related"},{"name":"up regulation of GSK","type":"related"},{"name":"up regulation of STK31","type":"related"},{"name":"up regulation of TPK","type":"related"},{"name":"up regulation of TPK I","type":"related"},{"name":"up regulation of TPK II","type":"related"},{"name":"up regulation of TTK","type":"related"},{"name":"up regulation of [Tau protein] kinase activity","type":"exact"},{"name":"up regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"up regulation of cdk5/p20","type":"related"},{"name":"up regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"up regulation of protein tau kinase activity","type":"exact"},{"name":"up regulation of tau kinase activity","type":"exact"},{"name":"up regulation of tau protein kinase activity","type":"exact"},{"name":"up regulation of tau-protein kinase I activity","type":"narrow"},{"name":"up regulation of tau-protein kinase II activity","type":"narrow"},{"name":"up regulation of tau-protein kinase activity","type":"exact"},{"name":"up regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"up-regulation of CDK5/p23","type":"related"},{"name":"up-regulation of GSK","type":"related"},{"name":"up-regulation of STK31","type":"related"},{"name":"up-regulation of TPK","type":"related"},{"name":"up-regulation of TPK I","type":"related"},{"name":"up-regulation of TPK II","type":"related"},{"name":"up-regulation of TTK","type":"related"},{"name":"up-regulation of [Tau protein] kinase activity","type":"exact"},{"name":"up-regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"up-regulation of cdk5/p20","type":"related"},{"name":"up-regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"up-regulation of protein tau kinase activity","type":"exact"},{"name":"up-regulation of tau kinase activity","type":"exact"},{"name":"up-regulation of tau protein kinase activity","type":"exact"},{"name":"up-regulation of tau-protein kinase I activity","type":"narrow"},{"name":"up-regulation of tau-protein kinase II activity","type":"narrow"},{"name":"up-regulation of tau-protein kinase activity","type":"exact"},{"name":"up-regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"upregulation of [Tau protein] kinase activity","type":"exact"},{"name":"upregulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"upregulation of cdk5/p20","type":"related"},{"name":"upregulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"upregulation of protein tau kinase activity","type":"exact"},{"name":"upregulation of tau kinase activity","type":"exact"},{"name":"upregulation of tau protein kinase activity","type":"exact"},{"name":"upregulation of tau-protein kinase I activity","type":"narrow"},{"name":"upregulation of tau-protein kinase II activity","type":"narrow"},{"name":"upregulation of tau-protein kinase activity","type":"exact"},{"name":"upregulation of tau-tubulin kinase activity","type":"narrow"}],"termid":"GO:1902949"}


id: PBO:0058431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4801","termid":"PBO:0058431"}


id: GO:1904269
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell cortex of the leading edge of a cell.","definition_xrefs":["PMID:25843030","GOC:kmv","GO_REF:0000064","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cell leading edge cell cortex","synonyms":[{"name":"cell cortex of cell leading edge","type":"exact"},{"name":"cell cortex of front of cell","type":"exact"},{"name":"cell cortex of leading edge of cell","type":"exact"},{"name":"cell periphery of cell leading edge","type":"related"},{"name":"cell periphery of front of cell","type":"related"},{"name":"cell periphery of leading edge of cell","type":"related"},{"name":"peripheral cytoplasm of cell leading edge","type":"related"},{"name":"peripheral cytoplasm of front of cell","type":"related"},{"name":"peripheral cytoplasm of leading edge of cell","type":"related"}],"termid":"GO:1904269"}


id: GO:0007503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fat body over time, from its formation to the mature structure. A fat body is an insect gland dorsal to the insect gut, with a function analogous to that of the vertebrate liver. It is a storage organ for fats, glycogen and protein and is a major site of intermediary metabolism.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat body development","termid":"GO:0007503"}


id: PR:Q10478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorting and assembly machinery component 50 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01861","PANTHER:PTHR12815:SF6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM50-like protein SPAC17C9.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.06","secondary_identifiers":["UniProtKB:Q10478"],"synonyms":[{"name":"Spom972h-SAMM50","type":"exact"}],"termid":"PR:Q10478"}


id: GO:1900686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gerfelin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"gerfelin biosynthetic process","termid":"GO:1900578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of gerfelin biosynthetic process","synonyms":[{"name":"regulation of gerfelin anabolism","type":"exact"},{"name":"regulation of gerfelin biosynthesis","type":"exact"},{"name":"regulation of gerfelin formation","type":"exact"},{"name":"regulation of gerfelin synthesis","type":"exact"}],"termid":"GO:1900686"}


id: PATO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001139 urine glucose composition (obsolete PATO:0001139)","termid":"PATO:0001139"}


id: GO:0140348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of lysophosphatidylcholine from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:26945070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lysophosphatidylcholine flippase activity","synonyms":[{"name":"lysophosphatidylcholine flippase activity (exoplasmic to cytosolic leaftlet)","type":"exact"}],"termid":"GO:0140348"}


id: PBO:0088333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas5","termid":"PBO:0088333"}


id: PBO:0042532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5 regulatory subunit 2","termid":"PBO:0042532"}


id: PBO:0049045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 36","termid":"PBO:0049045"}


id: GO:0071573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a shelterin complex. A shelterin complex is a nuclear telomere cap complex that is formed by the association of telomeric ssDNA- and dsDNA-binding proteins with telomeric DNA, and is involved in telomere protection and recruitment of telomerase.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"telomere organization","termid":"GO:0032200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0032200","GO:0044085"],"is_obsolete":false,"name":"shelterin complex assembly","synonyms":[{"name":"Pot1 complex assembly","type":"related"},{"name":"Pot1-Tpz1 complex assembly","type":"related"},{"name":"shelterin complex formation","type":"related"},{"name":"telosome assembly","type":"exact"}],"termid":"GO:0071573"}


id: PBO:0031289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_segregation","termid":"PBO:0031289"}


id: PBO:0004582
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.24.57","termid":"PBO:0004582"}


id: PBO:0091394
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small conserved C term region SMGDKMKGNMEKMAGKLTRDPELVQKGEDLKTG","termid":"PBO:0091394"}


id: PBO:0071705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 3","termid":"PBO:0071705"}


id: FYPO:0006879
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cleavage furrow ingression is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytokinesis","termid":"FYPO:0001367"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cleavage furrow ingression","synonyms":[{"name":"normal cleavage furrow ingression during mitotic cell cycle","type":"related"},{"name":"normal cleavage furrow ingression during vegetative growth","type":"exact"},{"name":"normal membrane closure during cytokinesis","type":"related"}],"termid":"FYPO:0006879"}


id: PBO:0064609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 4 homeobox 3","termid":"PBO:0064609"}


id: PATO:0001656
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A osmolarity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"osmolarity","termid":"PATO:0001655"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased osmolarity","synonyms":[{"name":"low osmolarity","type":"exact"}],"termid":"PATO:0001656"}


id: GO:0047419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-D-galactosamine 6-phosphate = acetate + D-galactosamine 6-phosphate.","definition_xrefs":["EC:3.5.1.25","MetaCyc:3.5.1.80-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810","GO:0019213"],"is_obsolete":false,"name":"N-acetylgalactosamine-6-phosphate deacetylase activity","secondary_identifiers":["RHEA:18149"],"termid":"GO:0047419"}


id: GO:1904730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intestinal lipid absorption.","definition_xrefs":["GOC:TermGenie","PMID:18768481","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intestinal absorption","termid":"GO:1904479"},{"relation_name":"is_a","term_name":"regulation of intestinal lipid absorption","termid":"GO:1904729"},{"relation_name":"negatively_regulates","term_name":"intestinal lipid absorption","termid":"GO:0098856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal lipid absorption","synonyms":[{"name":"down regulation of intestinal lipid absorption","type":"exact"},{"name":"down-regulation of intestinal lipid absorption","type":"exact"},{"name":"downregulation of intestinal lipid absorption","type":"exact"},{"name":"inhibition of intestinal lipid absorption","type":"narrow"}],"termid":"GO:1904730"}


id: GO:1904525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA amplification.","definition_xrefs":["GOC:TermGenie","PMID:26195783","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA amplification","termid":"GO:1904523"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"},{"relation_name":"positively_regulates","term_name":"DNA amplification","termid":"GO:0006277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA amplification","synonyms":[{"name":"activation of DNA amplification","type":"narrow"},{"name":"up regulation of DNA amplification","type":"exact"},{"name":"up-regulation of DNA amplification","type":"exact"},{"name":"upregulation of DNA amplification","type":"exact"}],"termid":"GO:1904525"}


id: PBO:0047187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 204 member C, pseudogene","termid":"PBO:0047187"}


id: PBO:0061634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 15 pseudogene 2","termid":"PBO:0061634"}


id: PBO:0085693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of sterol biosynthesis; specifically stabilizes Hmg2p, one of two HMG-CoA isoenzymes that catalyze the rate-limiting step in sterol biosynthesis; homolog of mammalian INSIG proteins; NSG2 has a paralog, NSG1, that arose from the whole genome duplication","termid":"PBO:0085693"}


id: FYPO:0009097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing xylose as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on xylose carbon source","synonyms":[{"name":"decreased growth on xylose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on xylose carbon source","type":"exact"},{"name":"reduced cell growth on xylose carbon source","type":"related"},{"name":"slow cell growth on xylose carbon source","type":"narrow"}],"termid":"FYPO:0009097"}


id: PR:Q09927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aca1 gene.","definition_xrefs":["UniProtKB:Q09927","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.04","synonyms":[{"name":"Spom972h-aca1","type":"exact"}],"termid":"PR:Q09927"}


id: GO:0075161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075161)","synonyms":[{"name":"negative regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075161"}


id: PBO:0069153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 405, pseudogene","termid":"PBO:0069153"}


id: GO:0051681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"6-alpha-maltosylglucose metabolic process","termid":"GO:0051679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"6-alpha-maltosylglucose catabolic process","synonyms":[{"name":"isopanose catabolic process","type":"exact"},{"name":"isopanose catabolism","type":"exact"}],"termid":"GO:0051681"}


id: GO:0010948
data:
  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id: PBO:0031356
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id: PBO:0030803
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id: PBO:0031438
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id: GO:1905528
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id: PBO:0083535
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id: SO:0001870
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id: PBO:0112592
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id: GO:0006695
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id: PBO:0082850
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id: GO:0047766
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-carbamoyl-L-serine + H2O + H+ = CO2 + 2 NH4 + pyruvate.","definition_xrefs":["RHEA:15445","EC:4.3.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"carbamoyl-serine ammonia-lyase activity","secondary_identifiers":["KEGG_REACTION:R00213","MetaCyc:CARBAMOYL-SERINE-AMMONIA-LYASE-RXN"],"synonyms":[{"name":"O-carbamoyl-L-serine ammonia-lyase (decarboxylating; pyruvate-forming)","type":"related"},{"name":"O-carbamoyl-L-serine ammonia-lyase (pyruvate-forming)","type":"related"},{"name":"O-carbamoyl-L-serine deaminase activity","type":"related"},{"name":"carbamoylserine deaminase activity","type":"related"}],"termid":"GO:0047766"}


id: PBO:0047912
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(9)(q22.1)","termid":"PBO:0047912"}


id: PBO:0005790
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex Epl1","termid":"PBO:0005790"}


id: FYPO:0007477
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the stable inheritance of heterochromatic structure is abnormal in regions of the genome where heterochromatin is normally maintained over successive generations.","definition_xrefs":["PMID:31278118","PMID:29899117","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal epigenetic heterochromatin inheritance","synonyms":[{"name":"abnormal PEV","type":"related"},{"name":"abnormal epigenetic heterochromatin propagation","type":"exact"},{"name":"abnormal epigenetic inheritance of heterochromatin","type":"exact"}],"termid":"FYPO:0007477"}


id: PBO:0069377
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 637, pseudogene","termid":"PBO:0069377"}


id: PBO:0059884
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id: GO:0018763
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id: GO:0010011
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id: GO:0014728
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id: PBO:0058956
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase interacting serine/threonine kinase 2 pseudogene 1","termid":"PBO:0058956"}


id: PBO:0046085
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 10","termid":"PBO:0046085"}


id: FYPO:0001491
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115417,115416,115420,115179],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0000648"},{"annotations":[115549,115512,115523,115517],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"},{"annotations":[115418,115419,115425],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001877"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetatively growing cell is viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02013":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null},"genotype_count":9,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"viable vegetative cell","references_by_uniquename":{"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_03048","SJAG_02013","SJAG_01794","SJAG_02819","SJAG_03453","SJAG_04280","SJAG_00514","SJAG_03581"],"single_locus_genotype_uniquenames":["scd1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","efc25delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","gef1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","ras1delta","pyp1delta","scd2delta"],"synonyms":[{"name":"viable cell during vegetative growth","type":"exact"},{"name":"viable vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001491","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: _global:reciprocal_of
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 reciprocal_of q2 if and only if : q1 and q2 are relational qualities and a phenotype e q1 e2 mutually implies a phenotype e2 q2 e.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reciprocal_of","termid":"_global:reciprocal_of"}


id: GO:0046331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling between cells of equivalent developmental potential that results in these cells adopting different developmental fates. An example is the suppression by cells with a particular fate of the adoption of the same fate by surrounding cells.","definition_xrefs":["GOC:kmv","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cell fate commitment","termid":"GO:0045168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"lateral inhibition","termid":"GO:0046331"}


id: PBO:0062575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 4 pseudogene","termid":"PBO:0062575"}


id: PBO:0083445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ALA1/YOR335C","termid":"PBO:0083445"}


id: PBO:0073529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 2","termid":"PBO:0073529"}


id: PBO:0077821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 1","termid":"PBO:0077821"}


id: PBO:0067649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 824, pseudogene","termid":"PBO:0067649"}


id: PBO:0029114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_process","termid":"PBO:0029114"}


id: GO:0035629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Addition of a carbohydrate or carbohydrate derivative unit via a nitrogen (N) atom of the N-terminal amino acid of a protein.","definition_xrefs":["GOC:bf","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-linked glycosylation","termid":"GO:0006487"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid N-linked glycosylation","termid":"GO:0035629"}


id: GO:1901388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta activation (obsolete GO:1901388)","synonyms":[{"name":"regulation of L-TGF-beta activation","type":"exact"},{"name":"regulation of TGF-B activation","type":"exact"},{"name":"regulation of TGF-beta activation","type":"exact"},{"name":"regulation of TGFB activation","type":"exact"},{"name":"regulation of TGFbeta activation","type":"exact"},{"name":"regulation of latent TGF-beta activation","type":"exact"}],"termid":"GO:1901388"}


id: PBO:0083229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps YBR223C; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083229"}


id: GO:0106007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location at the cell tip by attachment to the cell cortex.","definition_xrefs":["GOC:mah","PMID:25736293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring","termid":"GO:0034453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"microtubule anchoring at cell cortex of cell tip","termid":"GO:0106007"}


id: PBO:0077074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIA1 cytotoxic granule associated RNA binding protein like 1","termid":"PBO:0077074"}


id: FYPO:0002861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide uridylyltransferase (poly(U) polymerase) activity is decreased.","definition_xrefs":["PomBase:mah","PMID:17449726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal poly(U) polymerase activity","termid":"FYPO:0002860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased poly(U) polymerase activity","synonyms":[{"name":"decreased RNA uridylyltransferase activity","type":"exact"},{"name":"decreased polynucleotide uridylyltransferase activity","type":"exact"},{"name":"reduced poly(U) polymerase activity","type":"exact"}],"termid":"FYPO:0002861"}


id: PBO:0038494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 5","termid":"PBO:0038494"}


id: PBO:0059454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 4 with coiled-coils","termid":"PBO:0059454"}


id: GO:0050538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoyl-L-2-amino acid + H2O = L-2-amino acid + NH3 + CO2. The N-carbamoyl-L-2-amino acid is a 2-ureido carboxylate.","definition_xrefs":["EC:3.5.1.87","MetaCyc:3.5.1.87-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"N-carbamoyl-L-amino-acid hydrolase activity","secondary_identifiers":["RHEA:17581"],"synonyms":[{"name":"L-carbamoylase activity","type":"related"},{"name":"N-carbamoyl-L-amino acid amidohydrolase activity","type":"related"}],"termid":"GO:0050538"}


id: PBO:0027996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_mitotic_G2_phase","termid":"PBO:0027996"}


id: FYPO:0004934
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during G1 phase of the mitotic cell cycle is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during mitotic G1 phase","synonyms":[{"name":"increased RNA accumulation during mitotic G1 phase","type":"related"},{"name":"increased RNA level during G1 phase of mitotic cell cycle","type":"exact"},{"name":"increased RNA level during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"increased mRNA level during mitotic G1 phase","type":"narrow"},{"name":"increased transcript level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004934"}


id: FYPO:0000757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nigericin. Cells stop growing (and may die) at a concentration of nigericin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to nigericin","synonyms":[{"name":"hypersensitive to nigericin","type":"exact"},{"name":"sensitive to nigericin during mitotic cell cycle","type":"related"},{"name":"sensitive to nigericin during vegetative growth","type":"exact"}],"termid":"FYPO:0000757"}


id: FYPO:0006208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell differs from normal during a cellular response to copper ion starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level","termid":"FYPO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"altered RNA level during cellular response to copper ion starvation","synonyms":[{"name":"abnormal RNA level during cellular response to copper ion starvation","type":"exact"},{"name":"altered RNA level during cellular response to copper starvation","type":"exact"},{"name":"altered RNA level during copper starvation","type":"exact"},{"name":"altered cellular RNA level during cellular response to copper ion starvation","type":"exact"},{"name":"altered transcript level during cellular response to copper ion starvation","type":"exact"}],"termid":"FYPO:0006208"}


id: GO:0009321
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex, usually a homodimer, which directly reduces cellular levels of organic hydroperoxides.","definition_xrefs":["PMID:2649484","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alkyl hydroperoxide reductase complex","termid":"GO:0009321"}


id: PR:P0CT34
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-1 gene.","definition_xrefs":["UniProtKB:P0CT34","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-1 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.04","synonyms":[{"name":"Spom972h-Tf2-1","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT34"}


id: GO:0035522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the ubiquitin group from a monoubiquitinated histone H2A protein.","definition_xrefs":["PMID:20436459","PMID:18226187","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete monoubiquitinated histone H2A deubiquitination (obsolete GO:0035522)","synonyms":[{"name":"monoubiquitinated histone H2A deubiquitinylation","type":"exact"},{"name":"monoubiquitinated histone H2A deubiquitylation","type":"exact"}],"termid":"GO:0035522"}


id: PBO:0081453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 320","termid":"PBO:0081453"}


id: RO:HOM0000036
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves two members of a larger set of homologs.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_many_to_many_homology_relationship_with","synonyms":[{"name":"many to many homologous to","type":"exact"},{"name":"many-to-many homology","type":"exact"},{"name":"many:many homology ","type":"exact"}],"termid":"RO:HOM0000036"}


id: GO:0072387
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"flavin adenine dinucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FAD or FADH2 metabolic process","type":"exact"},{"name":"flavin adenine dinucleotide metabolism","type":"exact"},{"name":"flavin-adenine dinucleotide metabolic process","type":"exact"}],"termid":"GO:0072387","terms_by_termid":{"GO:0006747":null}}


id: PBO:0084233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydroxymethylpyrimidine (HMP) and HMP-phosphate kinase; involved in thiamine biosynthesis; member of a gene family with THI20 and THI22; functionally redundant with Thi20p","termid":"PBO:0084233"}


id: GO:1902547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to vascular endothelial growth factor stimulus.","definition_xrefs":["PMID:17895370","GOC:rl","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"cellular response to vascular endothelial growth factor stimulus","termid":"GO:0035924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to vascular endothelial growth factor stimulus","synonyms":[{"name":"regulation of cellular response to VEGF","type":"exact"},{"name":"regulation of cellular response to VEGFA","type":"narrow"},{"name":"regulation of cellular response to VEGFB","type":"narrow"},{"name":"regulation of cellular response to vascular endothelial growth factor","type":"exact"}],"termid":"GO:1902547"}


id: PBO:0005002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 2","termid":"PBO:0005002"}


id: GO:0006506
data:
  {"annotated_genes":["SJAG_01570","SJAG_03506","SJAG_06425","SJAG_02913","SJAG_04924","SJAG_01860","SJAG_04881","SJAG_03801","SJAG_05219","SJAG_02903","SJAG_05278","SJAG_02804","SJAG_01227","SJAG_03672","SJAG_04975","SJAG_01416","SJAG_04337","SJAG_03878","SJAG_02523","SJAG_04165","SJAG_00295","SJAG_03066","SJAG_02776","SJAG_00068","SJAG_06383","SJAG_00831","SJAG_02488","SJAG_05327","SJAG_03292","SJAG_04119","SJAG_00846","SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84824,85091,85706,87358,89111,89202,89656,90642,92555,94238,94785,94991,96345,96411,97721,99157,99893,102825,103657,104694,106038,107707,108468,110892,111316,112242,113327],"is_not":false,"summary":null,"term":"GO:0006506"},{"annotations":[88351,99830,110056,83613,87527],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage.","definition_xrefs":["ISBN:0198547684","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"GPI anchor metabolic process","termid":"GO:0006505"},{"relation_name":"is_a","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042158","GO:0006629"],"is_obsolete":false,"name":"GPI anchor biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015998"],"synonyms":[{"name":"GPI anchor anabolism","type":"exact"},{"name":"GPI anchor biosynthesis","type":"exact"},{"name":"GPI anchor formation","type":"exact"},{"name":"GPI anchor synthesis","type":"exact"},{"name":"GPI/GSI anchor biosynthesis","type":"broad"},{"name":"GPI/GSI anchor biosynthetic process","type":"broad"},{"name":"glycosylphosphatidylinositol biosynthesis","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthetic process","type":"exact"}],"termid":"GO:0006506","terms_by_termid":{"GO:0006506":null,"GO:0016255":null}}


id: PBO:0059548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Pro (CCN)","termid":"PBO:0059548"}


id: GO:0061951
data:
  {"annotated_genes":["SJAG_01516","SJAG_04609","SJAG_00379","SJAG_02282","SJAG_04565","SJAG_03915","SJAG_00144","SJAG_01809","SJAG_03029","SJAG_02177","SJAG_00330","SJAG_03756","SJAG_00858","SJAG_00916","SJAG_03838","SJAG_03970","SJAG_01114","SJAG_02231","SJAG_02912"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91853],"is_not":false,"summary":null,"term":"GO:0061951"},{"annotations":[108894,97247,103476,114950,87422,88408,114573,109117,91024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[91277,104905,109119,103150,103254,87303,102511,105695,94838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[84262],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a plasma membrane.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to plasma membrane","termid":"GO:0072659"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02231":null,"SJAG_02282":null,"SJAG_02912":null,"SJAG_03029":null,"SJAG_03756":null,"SJAG_03838":null,"SJAG_03915":null,"SJAG_03970":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061951","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0061951":null,"GO:0099638":null}}


id: PBO:0062894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacid CoA-transferase 1","termid":"PBO:0062894"}


id: PR:O43086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- elg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere length regulation protein elg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.11c","synonyms":[{"name":"Spom972h-elg1","type":"exact"},{"name":"telomere elongation suppressor elg1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43086"}


id: PBO:0086207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with the INO80 chromatin remodeling complex; associates with the INO80 complex under low-salt conditions; essential for growth under anaerobic conditions; protein abundance increases in response to DNA replication stress","termid":"PBO:0086207"}


id: PBO:0034685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_intergenic_meiotic_recombination","termid":"PBO:0034685"}


id: GO:0097542
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the cilium where the axoneme ends. The ciliary tip has been implicated in ciliary assembly and disassembly, as well as signal transduction.","definition_xrefs":["PMID:23970417","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary tip","synonyms":[{"name":"cilial tip","type":"exact"},{"name":"cilium tip","type":"exact"},{"name":"flagellar tip","type":"exact"},{"name":"flagellum tip","type":"exact"}],"termid":"GO:0097542"}


id: PBO:0045033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DISC1 intronic transcript 1","termid":"PBO:0045033"}


id: GO:0002409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a Langerhans cell in response to an external stimulus.","definition_xrefs":["PMID:16056255","PMID:16387601","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Langerhans cell chemotaxis","termid":"GO:0002409"}


id: PBO:0041804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 14","termid":"PBO:0041804"}


id: PBO:0089572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3e","termid":"PBO:0089572"}


id: PBO:0034421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_morphogenesis_of","termid":"PBO:0034421"}


id: RO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a colocalizes_with b if and only if  a is transiently or peripherally associated with b[GO].","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colocalizes_with","termid":"RO:0002325"}


id: GO:0015762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which rhamnose is transported across a lipid bilayer, from one side of a membrane to the other. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"rhamnose transmembrane transport","synonyms":[{"name":"rhamnose transport","type":"related"}],"termid":"GO:0015762"}


id: PBO:0072869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine N1-acetyltransferase family member 2","termid":"PBO:0072869"}


id: PATO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000191 learning_and memory (obsolete PATO:0000191)","termid":"PATO:0000191"}


id: PBO:0113443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of CPF cleavage and polyadenylation factor and E3 Ub-ligase; detects polyadenylation signal in nascent pre-mRNA and triggers 3' end formation of mRNA via cleavage and polyadenylation; binds pre-mRNA via zinc knuckle and RING finger; E3 ubiquitin ligase involved in polyubiquitination of endonuclease Ysh1p; contains a ubiquitin-like (UBL) domain, a RNA-binding zinc knuckle motif and a RING finger domain; relocalizes to cytosol in response to hypoxia; homolog of human RBBP6","termid":"PBO:0113443"}


id: GO:0048146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"positively_regulates","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast proliferation","synonyms":[{"name":"activation of fibroblast proliferation","type":"narrow"},{"name":"stimulation of fibroblast proliferation","type":"narrow"},{"name":"up regulation of fibroblast proliferation","type":"exact"},{"name":"up-regulation of fibroblast proliferation","type":"exact"},{"name":"upregulation of fibroblast proliferation","type":"exact"}],"termid":"GO:0048146"}


id: GO:0034076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidosqualene = cucurbitadienol.","definition_xrefs":["GOC:cb","PMID:18033581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"cucurbitadienol synthase activity","termid":"GO:0034076"}


id: PBO:0049877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hephaestin","termid":"PBO:0049877"}


id: MOD:01575
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01575"}


id: GO:0051759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sister chromosomes from the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during meiosis II.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"meiotic sister chromatid segregation","termid":"GO:0045144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0051179","GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"sister chromosome movement towards spindle pole involved in meiotic sister chromatid segregation","synonyms":[{"name":"meiosis II, sister chromosome movement towards spindle pole","type":"exact"},{"name":"sister chromosome movement towards spindle pole during meiosis II","type":"related"}],"termid":"GO:0051759"}


id: GO:0033195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkyl hydroperoxide stimulus. Alkyl hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH, where the substituent is an alkyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hydroperoxide","termid":"GO:0033194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alkyl hydroperoxide","termid":"GO:0033195"}


id: PBO:0026853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_centromere_inner_repeat","termid":"PBO:0026853"}


id: GO:1904038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of export of iron ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:BHF","PMID:15514116","GOC:kom","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"},{"relation_name":"regulates","term_name":"iron ion export across plasma membrane","termid":"GO:1903988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of iron export across plasma membrane","synonyms":[{"name":"regulation of ferrous iron export","type":"narrow"},{"name":"regulation of iron(2+) export","type":"narrow"}],"termid":"GO:1904038"}


id: PBO:0057901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3202-2","termid":"PBO:0057901"}


id: PBO:0081948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 2 pseudogene 2","termid":"PBO:0081948"}


id: PBO:0075722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorcin pseudogene 3","termid":"PBO:0075722"}


id: FYPO:0000470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mating type switching is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating type switching","termid":"FYPO:0000468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased mating type switching","synonyms":[{"name":"decreased mating type switching during mitotic cell cycle","type":"related"},{"name":"decreased mating type switching during vegetative growth","type":"exact"},{"name":"mating type switching: decreased","type":"related"},{"name":"reduced mating type switching","type":"exact"}],"termid":"FYPO:0000470"}


id: PBO:0064315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 4","termid":"PBO:0064315"}


id: GO:0072359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the circulatory system over time, from its formation to the mature structure. The circulatory system is the organ system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells, etc. to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis.","definition_xrefs":["UBERON:0001009","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circulatory system development","secondary_identifiers":["GO:0072358"],"synonyms":[{"name":"cardiovascular system development","type":"narrow"}],"termid":"GO:0072359"}


id: GO:0050341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thymine + 2-oxoglutarate + O2 = 5-hydroxymethyluracil + succinate + CO2.","definition_xrefs":["EC:1.14.11.6","MetaCyc:THYMINE-DIOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thymine dioxygenase activity","secondary_identifiers":["RHEA:10316"],"synonyms":[{"name":"5-hydroxy-methyluracil dioxygenase activity","type":"related"},{"name":"5-hydroxymethyluracil oxygenase activity","type":"related"},{"name":"thymine 7-hydroxylase activity","type":"related"},{"name":"thymine,2-oxoglutarate dioxygenase activity","type":"related"},{"name":"thymine,2-oxoglutarate:oxygen oxidoreductase (7-hydroxylating)","type":"related"}],"termid":"GO:0050341"}


id: SO:0000544
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A rolling circle transposon. Autonomous helitrons encode a 5'-to-3' DNA helicase and nuclease/ligase similar to those encoded by known rolling-circle replicons.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helitron","secondary_identifiers":["http://en.wikipedia.org/wiki/Helitron"],"synonyms":[{"name":"ISCR","type":"related"}],"termid":"SO:0000544"}


id: GO:0021926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to Golgi cells. A Golgi cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid","PMID:15157725","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi cell precursor proliferation","termid":"GO:0021926"}


id: PBO:0087116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome biogenesis factor; nucleolar protein associated with pre-rRNA components of the 90S preribosome, required for cleavage of pre-rRNA at A0, A1 and A2 sites; interacts with RNA helicase Dhr2p and RNA helicase-like protein Utp25p; required for incorporation of Utp25p into preribosomes","termid":"PBO:0087116"}


id: PBO:0049906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 7","termid":"PBO:0049906"}


id: GO:1902859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionyl-CoA.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","GOC:mengo_curators","PMID:15514053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"propionyl-CoA metabolic process","termid":"GO:1902858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0044248","GO:0006790","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"propionyl-CoA catabolic process","synonyms":[{"name":"propionyl-CoA breakdown","type":"exact"},{"name":"propionyl-CoA catabolism","type":"exact"},{"name":"propionyl-CoA degradation","type":"exact"}],"termid":"GO:1902859"}


id: PBO:0076106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 11","termid":"PBO:0076106"}


id: PBO:0054788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2201","termid":"PBO:0054788"}


id: PBO:0017774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Nnf1","termid":"PBO:0017774"}


id: GO:0002782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an antifungal peptide from a cell or a tissue.","definition_xrefs":["ISBN:0781735149","PMID:15638771","GOC:add","PMID:11807545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"},{"relation_name":"part_of","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0010467","GO:0006810"],"is_obsolete":false,"name":"antifungal peptide secretion","termid":"GO:0002782"}


id: PBO:0029682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_interphase_before_NETO","termid":"PBO:0029682"}


id: PBO:0055906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 30","termid":"PBO:0055906"}


id: PBO:0109611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma stem cell association long noncoding RNA","termid":"PBO:0109611"}


id: PBO:0082504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of i-AAA protease complex; complex is located in mitochondrial inner membrane; responsible for degradation of unfolded or misfolded mitochondrial gene products; serves as nonconventional translocation motor to pull PNPase into intermembrane space; also has role in intermembrane space protein folding; mutation causes elevated rate of mitochondrial turnover; human homolog YME1L1 can complement yeast null mutant","termid":"PBO:0082504"}


id: GO:0160125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A gated channel activity that enables the transmembrane transfer of a sodium ion by a channel that opens in response to a change in pH.","definition_xrefs":["PMID:34767445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated sodium channel activity","termid":"GO:0015280"},{"relation_name":"is_a","term_name":"pH-gated monoatomic ion channel activity","termid":"GO:0160128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"pH-gated sodium channel activity","synonyms":[{"name":"pH-dependent sodium channel activity","type":"related"},{"name":"pH-sensitive sodium channel activity","type":"related"}],"termid":"GO:0160125"}


id: PBO:0088164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Water channel that mediates water transport across cell membranes; only expressed in proliferating cells; controlled by osmotic signals; may be involved in freeze tolerance; disrupted by a stop codon in many S. cerevisiae strains","termid":"PBO:0088164"}


id: PBO:0034479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_synthase_(NADH)_activity","termid":"PBO:0034479"}


id: PBO:0090312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ddx27/Drs1","termid":"PBO:0090312"}


id: GO:0014712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of branchiomeric skeletal muscle development. Branchiomeric skeletal muscle development is the process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of branchiomeric skeletal muscle development","termid":"GO:0014711"},{"relation_name":"is_a","term_name":"positive regulation of muscle organ development","termid":"GO:0048636"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"positively_regulates","term_name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of branchiomeric skeletal muscle development","termid":"GO:0014712"}


id: PBO:0050334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 36","termid":"PBO:0050334"}


id: GO:0140259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a PRC1 complex.","definition_xrefs":["PMID:15280237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"PRC1 complex binding","termid":"GO:0140259"}


id: PBO:0030456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tacrolimus_during_salt_stress","termid":"PBO:0030456"}


id: GO:1904930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane that is part of an amphisome.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:17984323","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagosome membrane","termid":"GO:0000421"},{"relation_name":"part_of","term_name":"amphisome","termid":"GO:0044753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"amphisome membrane","termid":"GO:1904930"}


id: PBO:0040240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 7 interacting protein 2","termid":"PBO:0040240"}


id: GO:0097450
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal process of astrocyte abutting non-neuronal surfaces in the brain.","definition_xrefs":["NIF_Subcellular:sao388182739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte projection","termid":"GO:0097449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"astrocyte end-foot","synonyms":[{"name":"astrocyte endfoot","type":"exact"}],"termid":"GO:0097450"}


id: GO:0004299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage at peptide bonds with very broad specificity.","definition_xrefs":["EC:3.4.25.1"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome endopeptidase activity (obsolete GO:0004299)","synonyms":[{"name":"multicatalytic endopeptidase","type":"related"},{"name":"proteasome","type":"related"},{"name":"proteasome endopeptidase activity","type":"exact"},{"name":"proteasome endopeptidase complex","type":"related"}],"termid":"GO:0004299"}


id: PBO:0091009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth2","termid":"PBO:0091009"}


id: GO:0046161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of heme a, a derivative of heme found in cytochrome aa3.","definition_xrefs":["PMID:28352909","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"heme a metabolic process","termid":"GO:0046160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme a catabolic process","synonyms":[{"name":"haem a catabolic process","type":"exact"},{"name":"haem a catabolism","type":"exact"},{"name":"heme a breakdown","type":"exact"},{"name":"heme a catabolism","type":"exact"},{"name":"heme a degradation","type":"exact"}],"termid":"GO:0046161"}


id: FYPO:0006296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription by glucose (glucose repression) occurs to a greater extent than normal. Specific genes that are normally not transcribed in the presence of glucose are not derepressed in the mutant under conditions that derepress transcription in wild type cells.","definition_xrefs":["PomBase:mah","PMID:20139237","GO:0045014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription by glucose","termid":"FYPO:0000044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased negative regulation of transcription by glucose","synonyms":[{"name":"glucose repression defects","type":"related"},{"name":"increased glucose repression","type":"exact"},{"name":"increased glucose repression during vegetative growth","type":"exact"},{"name":"increased negative regulation of transcription by glucose during mitotic cell cycle","type":"related"},{"name":"increased negative regulation of transcription by glucose during vegetative growth","type":"exact"},{"name":"increased transcription of glucose starvation gene during vegetative growth","type":"related"}],"termid":"FYPO:0006296"}


