# terms

id: GO:0110063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the angiotensin-activated signaling pathway.","definition_xrefs":["PMID:28784619","GOC:lf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of angiotensin-activated signaling pathway","termid":"GO:0110061"},{"relation_name":"positively_regulates","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of angiotensin-activated signaling pathway","termid":"GO:0110063"}


id: GO:0006524
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alanine, 2-aminopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"alanine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alanine breakdown","type":"exact"},{"name":"alanine catabolism","type":"exact"},{"name":"alanine degradation","type":"exact"}],"termid":"GO:0006524","terms_by_termid":{"GO:0042853":null}}


id: GO:0031713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a B2 bradykinin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bradykinin receptor binding","termid":"GO:0031711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"B2 bradykinin receptor binding","synonyms":[{"name":"B2 bradykinin receptor ligand","type":"narrow"}],"termid":"GO:0031713"}


id: PBO:0069546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 817, pseudogene","termid":"PBO:0069546"}


id: PBO:0072295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 13","termid":"PBO:0072295"}


id: GO:0034371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a chylomicron, including the hydrolysis of triglyceride by lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:BHF","GOC:expert_pt","GOC:rl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle remodeling","termid":"GO:0034370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chylomicron remodeling","synonyms":[{"name":"chylomicron remnant formation","type":"related"},{"name":"chylomicron remodelling","type":"exact"}],"termid":"GO:0034371"}


id: PBO:0067019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 32, pseudogene","termid":"PBO:0067019"}


id: GO:0042273
data:
  {"annotated_genes":["SJAG_01339","SJAG_01954","SJAG_00932","SJAG_02868","SJAG_04492","SJAG_02952","SJAG_03713","SJAG_02759","SJAG_00689","SJAG_04180","SJAG_00841","SJAG_03905","SJAG_02754","SJAG_02275","SJAG_03458","SJAG_02374","SJAG_04304","SJAG_00749","SJAG_04414","SJAG_04940","SJAG_01839","SJAG_00537","SJAG_01494","SJAG_00390","SJAG_03666","SJAG_04847","SJAG_04004","SJAG_02475","SJAG_03466","SJAG_05679","SJAG_01606","SJAG_01420","SJAG_04919","SJAG_02644","SJAG_01752","SJAG_01161","SJAG_01621","SJAG_00752","SJAG_05223","SJAG_03413","SJAG_04562","SJAG_01581","SJAG_00271","SJAG_02417","SJAG_04330","SJAG_03658","SJAG_01568","SJAG_05190","SJAG_00323","SJAG_02535","SJAG_04599","SJAG_00479","SJAG_02508","SJAG_01122","SJAG_03496","SJAG_00921","SJAG_03012","SJAG_00722","SJAG_04395","SJAG_04669","SJAG_01364","SJAG_03080","SJAG_01813","SJAG_00166","SJAG_02830","SJAG_02745","SJAG_02427","SJAG_03789","SJAG_04308","SJAG_02890","SJAG_02840","SJAG_04289","SJAG_05248","SJAG_00882","SJAG_04108","SJAG_01811","SJAG_03697","SJAG_04992","SJAG_03773","SJAG_04176","SJAG_01454","SJAG_02436","SJAG_00949","SJAG_04346","SJAG_04066"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84111,86102,86513,86965,87192,87193,88137,94537,96593,96852,97991,99026,99520,100671,101828,101829,103078,104058,104100,104281,107173,108396,108910,112222,112661,113381,114981,115032,115033],"is_not":false,"summary":null,"term":"GO:0042273"},{"annotations":[94111,102102,106919,88927,107547,99629,111874,112271,109009,96850,85782,112758,114964,95301,89324,88510,96707,103542,108251,96523,111875,98637,105120],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[91086,87820,114632,100233],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[94112,95579,101313,93201,100906,83825,100399,106848,111455,88223,112682,100170,98638,112681,106849,90964,111454,98022,98021,100250],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[109726,112273,114966,88929,103983,89018],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000470"},{"annotations":[94081,111876,111877,96851,102104,113732,113753,85784,88511,94114,85996,106921,110951],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000463"},{"annotations":[104491],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[101655,93613,97323,98604,111816,98603,89485,93614,99795,111749,113857,114265],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":85,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00271":null,"SJAG_00323":null,"SJAG_00390":null,"SJAG_00479":null,"SJAG_00537":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00841":null,"SJAG_00882":null,"SJAG_00921":null,"SJAG_00932":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01364":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01568":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01621":null,"SJAG_01752":null,"SJAG_01811":null,"SJAG_01813":null,"SJAG_01839":null,"SJAG_01954":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02417":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02475":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02644":null,"SJAG_02745":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02890":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03413":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03658":null,"SJAG_03666":null,"SJAG_03697":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03789":null,"SJAG_03905":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04176":null,"SJAG_04180":null,"SJAG_04289":null,"SJAG_04304":null,"SJAG_04308":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04414":null,"SJAG_04492":null,"SJAG_04562":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04847":null,"SJAG_04919":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05190":null,"SJAG_05223":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"ribosomal large subunit biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal large subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042273","terms_by_termid":{"GO:0000027":null,"GO:0000448":null,"GO:0000463":null,"GO:0000470":null,"GO:0042273":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: GO:0042565
data:
  {"annotated_genes":["SJAG_01534"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92637],"is_not":false,"summary":null,"term":"GO:0042565"}]},"cv_name":"cellular_component","definition":"A complex which usually consists of three components, e.g. in Xenopus and yeast, the export receptor CRM1 (also known as exportin 1), the Ran protein and any RNA with a nuclear export sequence (NES). The complex acts to export RNA molecules with a NES from the nucleus through a nuclear pore.","definition_xrefs":["GOC:jl","PMID:9323123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport complex","termid":"GO:0031074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01534":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA nuclear export complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042565","terms_by_termid":{"GO:0042565":null}}


id: PBO:0054479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1879","termid":"PBO:0054479"}


id: PBO:0048320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 31","termid":"PBO:0048320"}


id: PBO:0055230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2656","termid":"PBO:0055230"}


id: SO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop_gained (SO:0001587) variant that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_gained","termid":"SO:0001587"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_gained_NMD_triggering","synonyms":[{"name":"stop gained variant-nonsense-mediated decay triggering","type":"exact"},{"name":"stop gained-NMD triggering","type":"exact"}],"termid":"SO:0002321"}


id: GO:0019800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a cross-link between peptide chains mediated by a chondroitin 4-sulfate glycosaminoglycan that originates from a typical O-glycosidic link to serine of one chain; the other chain is esterified, via the alpha-carbon of its C-terminal Asp, to C-6 of an internal N-acetylgalactosamine of the glycosaminoglycan chain.","definition_xrefs":["PMID:1898736","RESID:AA0219"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan (obsolete GO:0019800)","synonyms":[{"name":"peptide cross-linking via chondroitin 4-sulphate glycosaminoglycan","type":"exact"}],"termid":"GO:0019800"}


id: PBO:0077920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 11","termid":"PBO:0077920"}


id: FYPO:0003312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR formyltransferase) activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphoribosylaminoimidazolecarboxamide formyltransferase activity","termid":"FYPO:0003311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished phosphoribosylaminoimidazolecarboxamide formyltransferase activity","synonyms":[{"name":"abolished AICAR formyltransferase activity","type":"exact"},{"name":"phosphoribosylaminoimidazolecarboxamide formyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0003312"}


id: GO:0072020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proximal straight tubule over time, from its formation to the mature structure. The proximal straight tubule is the part of the descending limb that extends from the proximal convoluted tubule to the descending thin tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal straight tubule development","synonyms":[{"name":"S3 development","type":"exact"}],"termid":"GO:0072020"}


id: GO:0032951
data:
  {"annotated_genes":["SJAG_04509","SJAG_04462","SJAG_03705","SJAG_04668","SJAG_01787","SJAG_04666","SJAG_04771","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84069],"is_not":false,"summary":null,"term":"GO:0032951"},{"annotations":[88539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060635"},{"annotations":[83689,88542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[88544,98965,86917,101442,113988,88528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways relusting in the formation of beta-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of beta-glucan metabolic process","termid":"GO:0032950"},{"relation_name":"regulates","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of beta-glucan anabolism","type":"exact"},{"name":"regulation of beta-glucan biosynthesis","type":"exact"},{"name":"regulation of beta-glucan formation","type":"exact"},{"name":"regulation of beta-glucan synthesis","type":"exact"}],"termid":"GO:0032951","terms_by_termid":{"GO:0032951":null,"GO:0060635":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0042943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-amino acids from one side of a membrane to the other. D-amino acids are the D-enantiomers of amino acids.","definition_xrefs":["GOC:jl","GOC:mtg_transport","GOC:jsg","GOC:mah","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"D-amino acid transmembrane transporter activity","synonyms":[{"name":"D-amino acid transporter activity","type":"broad"}],"termid":"GO:0042943"}


id: PBO:0047835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box Q1","termid":"PBO:0047835"}


id: GO:0009576
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a leucoplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"leucoplast","termid":"GO:0009516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"leucoplast stroma","termid":"GO:0009576"}


id: PBO:0057349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 544a","termid":"PBO:0057349"}


id: PBO:0086489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative oxidoreductase involved in late endosome to Golgi transport; physical and genetical interactions with Btn2p; null mutant is viable, has extended S phase, and sensitive to expression of top1-T722A allele; similar to human FOXRED1","termid":"PBO:0086489"}


id: GO:1904379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein localization to cytosolic proteasome complex that is involved in ERAD pathway. Following their retrotranslocation out of the endoplasmic reticulum, protein substrates must be shuttled to the cytosolic proteasome for degradation.","definition_xrefs":["GOC:BHF","GOC:bf","GOC:PARL","GO_REF:0000060","GOC:TermGenie","PMID:21636303","GOC:nc"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to cytosolic proteasome complex involved in ERAD pathway (obsolete GO:1904379)","termid":"GO:1904379"}


id: PBO:0083868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein component of an SCF ubiquitin-ligase complex; modular substrate specificity factor which associates with core SCF (Cdc53p, Skp1p and Hrt1p/Rbx1p) to form the SCF(Grr1) complex; SCF(Grr1) acts as a ubiquitin-protein ligase directing ubiquitination of substrates such as: Gic2p, Mks1p, Mth1p, Cln1p, Cln2p and Cln3p; involved in carbon catabolite repression, glucose-dependent divalent cation transport, glucose transport, morphogenesis, and sulfite detoxification","termid":"PBO:0083868"}


id: PBO:0071937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 14","termid":"PBO:0071937"}


id: PATO:0002217
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality inhering in a bearer by virtue of the bearer's being combined, or impregnated, with nitric acid, or some of its compounds.","definition_xrefs":["neurolex:http://neurolex.org/wiki/Category:Nitrated_Molecular_Quality"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated","termid":"PATO:0002217"}


id: PBO:0070428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 6","termid":"PBO:0070428"}


id: PR:Q9Y7R6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- big1 gene.","definition_xrefs":["UniProtKB:Q9Y7R6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein big1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.06c","synonyms":[{"name":"Spom972h-big1","type":"exact"}],"termid":"PR:Q9Y7R6"}


id: PBO:0048990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 2","termid":"PBO:0048990"}


id: PBO:0090336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex19 protein","termid":"PBO:0090336"}


id: GO:0036406
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of gene products and protein complexes that are tethered to the periplasmic side of membrane by only a covalently attached anchor, embedded in the periplasmic side of the membrane only.","definition_xrefs":["GOC:dos","GOC:md"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of periplasmic side of cell outer membrane (obsolete GO:0036406)","synonyms":[{"name":"anchored to internal side of cell outer membrane","type":"exact"},{"name":"anchored to periplasmic side of cell outer membrane","type":"narrow"}],"termid":"GO:0036406"}


id: PBO:0016968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex assembly protein (predicted)","termid":"PBO:0016968"}


id: PBO:0072593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoschisin 1","termid":"PBO:0072593"}


id: GO:0018754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ammelide + H2O = cyanuric acid + NH3.","definition_xrefs":["PMID:1991731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"ammelide aminohydrolase activity","secondary_identifiers":["MetaCyc:RXN-8017"],"termid":"GO:0018754"}


id: PBO:0084079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-cyclohydrolase I, catalyzes first step in folic acid biosynthesis; human homolog GCH1 is implicated in dopa-responsive dystonia (DRD), and can complement yeast null mutant","termid":"PBO:0084079"}


id: PBO:0000876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1101, mitochondrial ribosomal protein Rsm22 (predicted)","termid":"PBO:0000876"}


id: GO:0102037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 4-nitrotoluene + NADH + O2 = 4-nitrobenzyl alcohol + NAD+ + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-nitrotoluene monooxygenase activity","secondary_identifiers":["MetaCyc:R361-RXN"],"termid":"GO:0102037"}


id: PBO:0045195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 8","termid":"PBO:0045195"}


id: FYPO:0009050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of hydroxyurea and methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to hydroxyurea and methyl methanesulfonate","synonyms":[{"name":"resistance to hydroxyurea and methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to hydroxyurea and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to hydroxyurea and methyl methanesulfonate in combination","type":"exact"},{"name":"resistant to hydroxyurea and methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009050"}


id: PBO:0076787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-2,3-enoyl-CoA reductase pseudogene 1","termid":"PBO:0076787"}


id: PBO:0047337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 5","termid":"PBO:0047337"}


id: GO:0045173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of O-sialoglycoproteins, glycoproteins which contain sialic acid as one of their carbohydrates. They are often found on or in the cell or tissue membranes and participate in a variety of biological activities.","definition_xrefs":["GOC:go_curators","PMID:8824323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"O-sialoglycoprotein catabolic process","synonyms":[{"name":"O-sialoglycoprotein breakdown","type":"exact"},{"name":"O-sialoglycoprotein catabolism","type":"exact"},{"name":"O-sialoglycoprotein degradation","type":"exact"}],"termid":"GO:0045173"}


id: GO:0085042
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host-derived membrane surrounding the symbiont arbuscule during symbiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"periarbuscular membrane","termid":"GO:0085042"}


id: PBO:0050533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone PARylation factor 1","termid":"PBO:0050533"}


id: PBO:0041552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 18","termid":"PBO:0041552"}


id: PBO:0073213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssemaphorin 4F","termid":"PBO:0073213"}


id: PBO:0056560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance 8 homologous recombination repair factor","termid":"PBO:0056560"}


id: FYPO:0002611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal at subtelomeric regions during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation at subtelomeric heterochromatin during mitotic S phase","synonyms":[{"name":"decreased histone H2A phosphorylation at subtelomere during mitotic S phase","type":"exact"},{"name":"decreased histone H2A phosphorylation at subtelomeric heterochromatin during S phase during vegetative growth","type":"exact"},{"name":"reduced histone H2A phosphorylation at subtelomeric heterochromatin during mitotic S phase","type":"exact"}],"termid":"FYPO:0002611"}


id: GO:0060044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell proliferation.","definition_xrefs":["GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle tissue growth","termid":"GO:0055022"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell proliferation","termid":"GO:0060043"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell proliferation","termid":"GO:0060038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell proliferation","synonyms":[{"name":"negative regulation of heart muscle cell proliferation","type":"exact"}],"termid":"GO:0060044"}


id: PBO:0029479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sterol_ester_level","termid":"PBO:0029479"}


id: PBO:0027885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_trimethylation","termid":"PBO:0027885"}


id: PBO:0080473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1B pseudogene 4","termid":"PBO:0080473"}


id: PBO:0056908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migration and invasion inhibitory protein","termid":"PBO:0056908"}


id: PBO:0042095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 167","termid":"PBO:0042095"}


id: GO:0008343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Feeding behavior in a fully developed and mature organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"},{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult feeding behavior","synonyms":[{"name":"adult feeding behaviour","type":"exact"}],"termid":"GO:0008343"}


id: GO:0048283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of determinate inflorescences are generated and organized. A determinate inflorescence is one that can produce an undefined number of floral meristems.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflorescence morphogenesis","termid":"GO:0048281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indeterminate inflorescence morphogenesis","termid":"GO:0048283"}


id: GO:0000220
data:
  {"annotated_genes":["SJAG_03406","SJAG_02023","SJAG_05294","SJAG_01913","SJAG_00516","SJAG_02782"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86000,86312,88178,91787,96052,100028],"is_not":false,"summary":null,"term":"GO:0000220"}]},"cv_name":"cellular_component","definition":"The V0 domain of a proton-transporting V-type ATPase found in the vacuolar membrane.","definition_xrefs":["PMID:16449553","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase, V0 domain","termid":"GO:0033179"},{"relation_name":"part_of","term_name":"vacuolar proton-transporting V-type ATPase complex","termid":"GO:0016471"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase, V0 domain","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar hydrogen ion-transporting ATPase V0 domain","type":"exact"}],"termid":"GO:0000220","terms_by_termid":{"GO:0000220":null}}


id: GO:0052774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucosyl-N-acetylglucosamine + H2O = glucosamine + N-acetylglucosamine.","definition_xrefs":["GOC:mengo_curators","PMID:16736587","PMID:16232910","PMID:15136574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"glucosyl-N-acetylglucosamine glucosaminidase activity","termid":"GO:0052774"}


id: GO:0035978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an phosphate group to a serine residue at position 139 of the histone.","definition_xrefs":["GOC:yaf","PMID:16061642"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-S139 phosphorylation (obsolete GO:0035978)","synonyms":[{"name":"histone H2A.x phosphorylation at S139","type":"narrow"}],"termid":"GO:0035978"}


id: FYPO:0002016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to oxygen. Cells stop growing (and may die) at a level of oxygen that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to oxygen","synonyms":[{"name":"hypersensitive to oxygen","type":"exact"},{"name":"sensitive to elemental oxygen","type":"exact"},{"name":"sensitive to oxygen during mitotic cell cycle","type":"related"},{"name":"sensitive to oxygen during vegetative growth","type":"exact"}],"termid":"FYPO:0002016"}


id: GO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Movement of a MAP kinase to the nucleus in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK (pseudohyphal growth) (obsolete GO:0000195)","synonyms":[{"name":"nuclear translocation of MAPK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000195"}


id: GO:0035870
data:
  {"annotated_genes":["SJAG_04487","SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95112,114677],"is_not":false,"summary":null,"term":"GO:0035870"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dITP + H2O = dIMP + H+ + diphosphate.","definition_xrefs":["RHEA:28342","GOC:dgf","PMID:21548881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03797":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0047429","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"dITP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.66","Reactome:R-HSA-2509838","KEGG_REACTION:R03531","MetaCyc:RXN0-1602"],"synonyms":[{"name":"2'-deoxyinosine-5'-triphosphate pyrophosphohydrolase activity","type":"exact"},{"name":"dITP pyrophosphatase activity","type":"exact"},{"name":"deoxyinosine triphosphate pyrophosphatase activity","type":"exact"}],"termid":"GO:0035870","terms_by_termid":{"GO:0035870":null}}


id: PBO:0088357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase","termid":"PBO:0088357"}


id: SO:0001194
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a GNA sequence in the (R)-GNA enantiomer.","definition_xrefs":["CHEBI:48016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GNA","termid":"SO:0001192"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R_GNA","synonyms":[{"name":"R GNA","type":"exact"}],"termid":"SO:0001194"}


id: PBO:0048152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYN proto-oncogene, Src family tyrosine kinase","termid":"PBO:0048152"}


id: GO:1905848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to oxidopamine.","definition_xrefs":["GOC:TermGenie","PMID:23721876","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidopamine","termid":"GO:1905846"},{"relation_name":"positively_regulates","term_name":"cellular response to oxidopamine","termid":"GO:1905842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to oxidopamine","synonyms":[{"name":"activation of cellular response to oxidopamine","type":"narrow"},{"name":"up regulation of cellular response to oxidopamine","type":"exact"},{"name":"up-regulation of cellular response to oxidopamine","type":"exact"},{"name":"upregulation of cellular response to oxidopamine","type":"exact"}],"termid":"GO:1905848"}


id: GO:0008335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the structural integrity of the ring canals connecting the female germline cyst.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"ovarian nurse cell to oocyte transport","termid":"GO:0007300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0006810","GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"female germline ring canal stabilization","synonyms":[{"name":"nurse cell ring canal stabilization","type":"narrow"},{"name":"ovarian ring canal stabilization","type":"narrow"}],"termid":"GO:0008335"}


id: GO:0106422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Zeaxanthin + O2 = (3R)-11-cis-3-hydroxyretinal + (3R)-all-trans-3-hydroxyretinal.","definition_xrefs":["PMID:19889630","PMID:19020100","RHEA:33931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid dioxygenase activity","termid":"GO:0010436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"carotenoid isomerooxygenase activity","secondary_identifiers":["EC:1.13.11.65"],"termid":"GO:0106422"}


id: PBO:0048033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III and SPRY domain containing 1","termid":"PBO:0048033"}


id: GO:0051841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of cytolysis of symbiont cells (obsolete GO:0051841)","synonyms":[{"name":"activation by host of cytolysis of symbiont cells","type":"narrow"},{"name":"stimulation by host of cytolysis of symbiont cells","type":"narrow"},{"name":"up regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"up-regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"upregulation by host of cytolysis of symbiont cells","type":"exact"}],"termid":"GO:0051841"}


id: GO:0140878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of griseofulvin, an important antifungal drug that has been in use for a long time for treating dermatophyte infections.","definition_xrefs":["PMID:20534346","PMID:23978092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"griseofulvin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-7653"],"synonyms":[{"name":"griseofulvin anabolism","type":"exact"},{"name":"griseofulvin biosynthesis","type":"exact"},{"name":"griseofulvin formation","type":"exact"},{"name":"griseofulvin synthesis","type":"exact"}],"termid":"GO:0140878"}


id: GO:1901885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-hydroxybenzoyl-CoA.","definition_xrefs":["GOC:TermGenie","PMID:19757094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-hydroxybenzoyl-CoA metabolic process","synonyms":[{"name":"2-hydroxybenzoyl-CoA metabolism","type":"exact"}],"termid":"GO:1901885"}


id: GO:0045818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycogen catabolic process","termid":"GO:0005981"},{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of glycogen metabolic process","termid":"GO:0070874"},{"relation_name":"negatively_regulates","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044248","GO:0006091"],"is_obsolete":false,"name":"negative regulation of glycogen catabolic process","synonyms":[{"name":"down regulation of glycogen catabolic process","type":"exact"},{"name":"down-regulation of glycogen catabolic process","type":"exact"},{"name":"downregulation of glycogen catabolic process","type":"exact"},{"name":"inhibition of glycogen catabolic process","type":"narrow"},{"name":"negative regulation of glycogen breakdown","type":"exact"},{"name":"negative regulation of glycogen catabolism","type":"exact"},{"name":"negative regulation of glycogen degradation","type":"exact"},{"name":"negative regulation of glycogenolysis","type":"exact"}],"termid":"GO:0045818"}


id: PBO:0046470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erb-b2 receptor tyrosine kinase 4","termid":"PBO:0046470"}


id: PBO:0055484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2917","termid":"PBO:0055484"}


id: GO:0000511
data:
  {"annotated_genes":["SJAG_00942","SJAG_02035","SJAG_03128","SJAG_02416","SJAG_02314"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94281,104214,107381,107382,109720,109721,113008],"is_not":false,"summary":null,"term":"GO:0000511"}]},"cv_name":"molecular_function","definition":"A histone chaperone that carries a H2A-H2B histone complex.","definition_xrefs":["PMID:28053344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone chaperone activity","termid":"GO:0140713"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00942":null,"SJAG_02035":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_03128":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140597"}],"interesting_parent_ids":["GO:0003674","GO:0140597","GO:0140104"],"is_obsolete":false,"name":"H2A-H2B histone complex chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H2A-H2B histone carrier activity","type":"exact"}],"termid":"GO:0000511","terms_by_termid":{"GO:0000511":null}}


id: PBO:0051452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-45","termid":"PBO:0051452"}


id: PBO:0069407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 667, pseudogene","termid":"PBO:0069407"}


id: PBO:0050286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H6 family homeobox 3","termid":"PBO:0050286"}


id: PATO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001118 momentum value (obsolete PATO:0001118)","termid":"PATO:0001118"}


id: GO:0000062
data:
  {"annotated_genes":["SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"}]},"cv_name":"molecular_function","definition":"Binding to a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group.","definition_xrefs":["ISBN:0198506732","GOC:krc","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA binding","termid":"GO:0120227"},{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"fatty-acyl-CoA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty-acyl binding","type":"broad"},{"name":"fatty-acyl-coenzyme A binding","type":"exact"}],"termid":"GO:0000062","terms_by_termid":{"GO:0036042":null}}


id: PBO:0089685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box protein","termid":"PBO:0089685"}


id: PBO:0109385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 16","termid":"PBO:0109385"}


id: GO:0090522
data:
  {"annotated_genes":["SJAG_03864","SJAG_04960","SJAG_02320","SJAG_02166","SJAG_01925","SJAG_04044","SJAG_03938","SJAG_03357"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84797,86896,95668,98039,109982,110264,113810,114906],"is_not":false,"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The initial, indirect interaction between a secretory vesicle membrane and a site of exocytosis in the plasma membrane. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. Interaction can occur via direct binding to membrane phospholipids or membrane proteins, or via binding to vesicle coat proteins. This process is distinct from and prior to docking and fusion.","definition_xrefs":["PMID:17488620","PMID:22420621","PMID:10559876","PMID:27243008","PMID:17052174","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering","termid":"GO:0099022"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"vesicle tethering involved in exocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vesicle tethering to plasma membrane","type":"narrow"}],"termid":"GO:0090522","terms_by_termid":{"GO:0090522":null}}


id: FYPO:0007210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total volume of all mitochondria in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrial morphology","termid":"FYPO:0003896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitochondrial volume","synonyms":[{"name":"normal mitochondrial volume during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial volume during vegetative growth","type":"exact"},{"name":"normal total mitochondrial volume","type":"exact"}],"termid":"FYPO:0007210"}


id: PR:O14064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bir1 gene.","definition_xrefs":["UniProtKB:O14064","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bir1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.02c","synonyms":[{"name":"Spom972h-bir1","type":"exact"},{"name":"chromosome segregation protein cut17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14064"}


id: GO:0045263
data:
  {"annotated_genes":["SJAG_MIT37","SJAG_04122","SJAG_00836","SJAG_MIT09","SJAG_00542","SJAG_02105","SJAG_05204","SJAG_03925","SJAG_00133","SJAG_00985","SJAG_MIT15","SJAG_07003"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104008,115131,89394,89993,90970,115122,99802,115127,97933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000276"},{"annotations":[111947,99773,103918],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000274"}]},"cv_name":"cellular_component","definition":"All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins.","definition_xrefs":["PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, proton-transporting domain","termid":"GO:0033177"},{"relation_name":"part_of","term_name":"proton-transporting ATP synthase complex","termid":"GO:0045259"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex, coupling factor F(o)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-transporting ATP synthase complex, coupling factor F(o)","type":"exact"},{"name":"hydrogen-transporting ATP synthase, F0 sector","type":"exact"},{"name":"hydrogen-transporting ATP synthase, coupling factor CF(0)","type":"narrow"},{"name":"proton-transporting ATP synthase complex, coupling factor F(0)","type":"exact"}],"termid":"GO:0045263","terms_by_termid":{"GO:0000274":null,"GO:0000276":null}}


id: PBO:0028096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_condensed_chromosomes","termid":"PBO:0028096"}


id: GO:0010837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"keratinocyte proliferation","termid":"GO:0043616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of keratinocyte proliferation","termid":"GO:0010837"}


id: GO:1900597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving demethylkotanin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"demethylkotanin metabolic process","synonyms":[{"name":"demethylkotanin metabolism","type":"exact"}],"termid":"GO:1900597"}


id: PBO:0108891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 4","termid":"PBO:0108891"}


id: PBO:0084481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Medium chain fatty acyl-CoA synthetase; activates imported fatty acids; accepts a wide range of fatty acid chain lengths with a preference for medium chains, C9:0-C13:0; localized to the peroxisome; comparative analysis suggests that a mitochondrially targeted form may result from translation starting at a non-canonical codon upstream of the annotated start codon","termid":"PBO:0084481"}


id: PBO:0004710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip2 subfamily","termid":"PBO:0004710"}


id: GO:0015698
data:
  {"annotated_genes":["SJAG_01033","SJAG_00671","SJAG_01183","SJAG_02463","SJAG_01973","SJAG_03401","SJAG_01941","SJAG_04241","SJAG_01059","SJAG_01168","SJAG_00048","SJAG_00233","SJAG_00547","SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"},{"annotations":[57095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035445"},{"annotations":[107769,101800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902476"},{"annotations":[109854,96937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"},{"annotations":[85649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098661"},{"annotations":[100723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990547"},{"annotations":[84587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[111893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[108836,112614,90170,99905,105814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035435"},{"annotations":[95515],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000185"},{"annotations":[96465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[106235,112729,63824,61311,65075,65076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"}]},"cv_name":"biological_process","definition":"The directed movement of inorganic anions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Inorganic anions are atoms or small molecules with a negative charge which do not contain carbon in covalent linkage.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00233":null,"SJAG_00547":null,"SJAG_00671":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_01168":null,"SJAG_01183":null,"SJAG_01941":null,"SJAG_01973":null,"SJAG_02463":null,"SJAG_03401":null,"SJAG_04241":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"inorganic anion transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015698","terms_by_termid":{"GO:0035435":null,"GO:0035445":null,"GO:0098661":null,"GO:0140116":null,"GO:0140159":null,"GO:0180029":null,"GO:1902358":null,"GO:1902434":null,"GO:1902476":null,"GO:1990547":null,"GO:1990557":null,"GO:2000185":null}}


id: GO:0072589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A box H/ACA RNP complex that is located in the Cajal body of the nucleoplasm. In higher eukaryotes, box H/ACA RNP located in Cajal bodies mediate pseudouridylation of spliceosomal snRNAs.","definition_xrefs":["PMID:17284456","PMID:20227365","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA RNP complex","termid":"GO:0072588"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"Cajal body","termid":"GO:0015030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"box H/ACA scaRNP complex","synonyms":[{"name":"nucleoplasmic box H/ACA RNP pseudouridylase complex","type":"exact"}],"termid":"GO:0072589"}


id: PBO:0054714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2123","termid":"PBO:0054714"}


id: PBO:0078735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 7-1","termid":"PBO:0078735"}


id: GO:0071070
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to thrombospondin-2.","definition_xrefs":["PMID:11980922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha4-beta1 integrin-thrombospondin-2 complex","synonyms":[{"name":"ITGA4-ITGB1-THBS2 complex","type":"narrow"}],"termid":"GO:0071070"}


id: PBO:0075745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 72","termid":"PBO:0075745"}


id: PBO:0048760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell-less 1, spermatogenesis associated","termid":"PBO:0048760"}


id: SO:0001222
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by histone methylation.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced_by_histone_modification","termid":"SO:0001221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_histone_methylation","synonyms":[{"name":"silenced by histone methylation","type":"exact"}],"termid":"SO:0001222"}


id: GO:0042714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins on DNA or RNA to form the complex that mediates dosage compensation on one or more X chromosomes.","definition_xrefs":["PMID:11102361","PMID:12672493","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"sex-chromosome dosage compensation","termid":"GO:0007549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"dosage compensation complex assembly","termid":"GO:0042714"}


id: GO:0048744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:mtg_muscle","GOC:lm","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle fiber development","termid":"GO:0048742"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle fiber development","synonyms":[{"name":"down regulation of skeletal muscle fiber development","type":"exact"},{"name":"down-regulation of skeletal muscle fiber development","type":"exact"},{"name":"downregulation of skeletal muscle fiber development","type":"exact"},{"name":"inhibition of skeletal muscle fiber development","type":"narrow"},{"name":"negative regulation of skeletal muscle fibre development","type":"exact"},{"name":"negative regulation of skeletal myofiber development","type":"exact"},{"name":"negative regulation of skeletal myofibre development","type":"exact"}],"termid":"GO:0048744"}


id: GO:0009628
data:
  {"annotated_genes":["SJAG_03815","SJAG_01648","SJAG_04388","SJAG_00642","SJAG_02334","SJAG_04877","SJAG_04205","SJAG_00436","SJAG_04187","SJAG_04668","SJAG_05197","SJAG_02828","SJAG_02426","SJAG_02182","SJAG_02592","SJAG_00863","SJAG_02381","SJAG_04726","SJAG_03345","SJAG_03949","SJAG_04791","SJAG_00729","SJAG_02860","SJAG_00814","SJAG_04018","SJAG_01262","SJAG_05242","SJAG_03893","SJAG_00409","SJAG_00208","SJAG_01010","SJAG_02199","SJAG_02818","SJAG_02091","SJAG_01585","SJAG_04055","SJAG_02883","SJAG_03527","SJAG_04190","SJAG_04567","SJAG_01084","SJAG_03898","SJAG_02342","SJAG_02200","SJAG_01584","SJAG_02258","SJAG_01150","SJAG_00661","SJAG_03319","SJAG_03185","SJAG_00596","SJAG_01186","SJAG_04082","SJAG_00272","SJAG_04150","SJAG_02266","SJAG_00221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[100326,100434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[88525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[115554,115553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[85664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[111595,106114,111596,101091,85007,91826,96650,86955,92611,101376,88213,106113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[97335,105961,107819,113083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[90495,113171,100637,98912,88014,92104,102598,110571,112391,106451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[96289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[86956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071502"},{"annotations":[104554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"},{"annotations":[101029,91365,98946,105221],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[112525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[85417,112501],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900039"},{"annotations":[100106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009314"},{"annotations":[108939,90092,84185,102041,91189,108387,107528,106933,100348,89785,103090,85731,93260,92151,91399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (not derived from living organisms) stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00221":null,"SJAG_00272":null,"SJAG_00409":null,"SJAG_00436":null,"SJAG_00596":null,"SJAG_00642":null,"SJAG_00661":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01084":null,"SJAG_01150":null,"SJAG_01186":null,"SJAG_01262":null,"SJAG_01584":null,"SJAG_01585":null,"SJAG_01648":null,"SJAG_02091":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02258":null,"SJAG_02266":null,"SJAG_02334":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02426":null,"SJAG_02592":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03319":null,"SJAG_03345":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03893":null,"SJAG_03898":null,"SJAG_03949":null,"SJAG_04018":null,"SJAG_04055":null,"SJAG_04082":null,"SJAG_04150":null,"SJAG_04187":null,"SJAG_04190":null,"SJAG_04205":null,"SJAG_04388":null,"SJAG_04567":null,"SJAG_04668":null,"SJAG_04726":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to abiotic stimulus","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:23873862":null},"synonyms":[{"name":"response to abiotic stress","type":"narrow"}],"termid":"GO:0009628","terms_by_termid":{"GO:0009314":null,"GO:0009785":null,"GO:0031990":null,"GO:0034605":null,"GO:0050982":null,"GO:0070370":null,"GO:0070914":null,"GO:0071456":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null,"GO:0071483":null,"GO:0071502":null,"GO:1900039":null,"GO:1904161":null}}


id: PBO:0065399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMA3 antisense RNA 1","termid":"PBO:0065399"}


id: GO:0000138
data:
  {"annotated_genes":["SJAG_03347","SJAG_03278","SJAG_01025","SJAG_00567","SJAG_03634"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86482,92183,95624,97273,109178],"is_not":false,"summary":null,"term":"GO:0000138"}]},"cv_name":"cellular_component","definition":"The Golgi cisterna farthest from the endoplasmic reticulum; the final processing compartment through which proteins pass before exiting the Golgi apparatus; the compartment in which N-linked protein glycosylation is completed.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi cisterna","termid":"GO:0031985"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00567":null,"SJAG_01025":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005794","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Golgi trans cisterna","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"late Golgi","type":"related"}],"termid":"GO:0000138","terms_by_termid":{"GO:0000138":null}}


id: PBO:0014600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triman, ribonuclease involved in priRNA formation Tri1","termid":"PBO:0014600"}


id: GO:0006925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an inflammatory cell, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory cell apoptotic process","synonyms":[{"name":"apoptosis of inflammatory cells","type":"exact"},{"name":"inflammatory cell apoptosis","type":"narrow"},{"name":"inflammatory cell programmed cell death by apoptosis","type":"exact"},{"name":"killing of inflammatory cells","type":"exact"},{"name":"programmed cell death of inflammatory cells by apoptosis","type":"exact"},{"name":"programmed cell death, inflammatory cells","type":"exact"}],"termid":"GO:0006925"}


id: PBO:0030830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoribosylamine-glycine_ligase_activity","termid":"PBO:0030830"}


id: SO:0000249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000249 six_cutter_restriction_site (obsolete SO:0000249)","synonyms":[{"name":"6-cutter_restriction_site","type":"related"},{"name":"six-cutter_restriction_site","type":"related"}],"termid":"SO:0000249"}


id: PBO:0049764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 1","termid":"PBO:0049764"}


id: GO:1990670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi cis cisterna. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["PMID:24119662","GOC:bhm","PMID:16038056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"vesicle fusion with Golgi cis cisterna membrane","termid":"GO:1990670"}


id: PBO:0083775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nuclear protein; constituent of 66S pre-ribosomal particles; required for maturation of 25S and 5.8S rRNAs; required for maintenance of M1 satellite double-stranded RNA of the L-A virus","termid":"PBO:0083775"}


id: GO:0002706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of lymphocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"regulates","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"}


id: PBO:0029985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ubiquitin_ligase_activity","termid":"PBO:0029985"}


id: FYPO:0001261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitotic cytokinesis is decreased during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cytokinesis","termid":"FYPO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"decreased cytokinesis during cellular hyperosmotic response","synonyms":[{"name":"decreased cytokinesis during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"decreased cytokinesis during cellular hyperosmotic response during vegetative growth","type":"exact"},{"name":"decreased mitotic cytokinesis during cellular hyperosmotic response","type":"exact"},{"name":"reduced cytokinesis during cellular hyperosmotic response","type":"exact"}],"termid":"FYPO:0001261"}


id: GO:0102640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: paspalicine + O2 + NADPH + H+ = paspalinine + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"paspalinine synthase activity","secondary_identifiers":["MetaCyc:RXN-15738"],"termid":"GO:0102640"}


id: FYPO:0003367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize pyridoxine, and therefore requires pyridoxine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for pyridoxine","synonyms":[{"name":"growth auxotrophic for pyridoxine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for pyridoxine during vegetative growth","type":"exact"},{"name":"pyridoxine auxotrophy","type":"exact"}],"termid":"FYPO:0003367"}


id: GO:0090630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of an inactive GTPase through the replacement of GDP by GTP.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of GTPase activity","termid":"GO:0043547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of GTPase activity","secondary_identifiers":["GO:0032860","GO:0032856","GO:0032864","GO:0032857","GO:0032858","GO:0032862","GO:0032859","GO:0032863","GO:0032861"],"synonyms":[{"name":"Ran GTPase activation","type":"narrow"},{"name":"Rap GTPase activation","type":"narrow"},{"name":"Ras GTPase activation","type":"narrow"},{"name":"Rho GTPase activation","type":"narrow"},{"name":"ARF GTPase activation","type":"narrow"},{"name":"Cdc42 GTPase activation","type":"narrow"},{"name":"Rab GTPase activation","type":"narrow"},{"name":"Rac GTPase activation","type":"narrow"},{"name":"Ral GTPase activation","type":"narrow"},{"name":"activation of ARF GTPase activity","type":"narrow"},{"name":"activation of Cdc42 GTPase activity","type":"narrow"},{"name":"activation of Rab GTPase activity","type":"narrow"},{"name":"activation of Rac GTPase activity","type":"narrow"},{"name":"activation of Ral GTPase activity","type":"narrow"},{"name":"activation of Ran GTPase activity","type":"narrow"},{"name":"activation of Rap GTPase activity","type":"narrow"},{"name":"activation of Ras GTPase activity","type":"narrow"},{"name":"activation of Rho GTPase activity","type":"narrow"}],"termid":"GO:0090630"}


id: PBO:0052540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 13","termid":"PBO:0052540"}


id: SO:1000067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, due to the deletion of a nucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000067 sequence_variant_causing_minus_1_frameshift (obsolete SO:1000067)","synonyms":[{"name":"minus 1 frameshift mutation","type":"exact"},{"name":"sequence variant causing minus 1 frameshift","type":"exact"}],"termid":"SO:1000067"}


id: MOD:02044
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-cysteine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-cysteine residue","synonyms":[{"name":"XlnkCys","type":"exact"}],"termid":"MOD:02044"}


id: PBO:0077363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 104","termid":"PBO:0077363"}


id: GO:0051418
data:
  {"annotated_genes":["SJAG_03540","SJAG_02886","SJAG_01756","SJAG_02761","SJAG_07018","SJAG_00856","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[102546,96200,113281,113045,97102,96503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051415"},{"annotations":[97103,114736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, mediated by the microtubule organizing center.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"microtubule nucleation by microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MTOC-mediated microtubule nucleation","type":"exact"},{"name":"microtubule nucleation by MTOC","type":"exact"},{"name":"microtubule nucleation by microtubule organising centre","type":"exact"},{"name":"microtubule organizing center-mediated microtubule nucleation","type":"exact"}],"termid":"GO:0051418","terms_by_termid":{"GO:0030954":null,"GO:0051415":null,"GO:0051417":null}}


id: PBO:0035943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytoplasmic_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035943"}


id: PBO:0087541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RAVE complex (Rav1p, Rav2p, Skp1p); the RAVE complex promotes assembly of the V-ATPase holoenzyme; required for transport between the early and late endosome/PVC and for localization of TGN membrane proteins; potential Cdc28p substrate","termid":"PBO:0087541"}


id: PBO:0072407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 12","termid":"PBO:0072407"}


id: GO:0106225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 2-hydroxyisobutyrylation of a lysine residue in a protein.","definition_xrefs":["GOC:sp","PMID:29775581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine 2-hydroxyisobutyrylation","termid":"GO:0106225"}


id: PBO:0054408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1804","termid":"PBO:0054408"}


id: PBO:0001902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase family Scn1","termid":"PBO:0001902"}


id: GO:0061719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucose into pyruvate, with the concomitant production of a small amount of ATP and the utilization of ADP in the initial kinase reactions.","definition_xrefs":["MetaCyc:P341-PWY","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glucose catabolic process to pyruvate utilizing ADP","termid":"GO:0061719"}


id: PATO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an entire organism or part of an organism.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organismal quality","termid":"PATO:0001995"}


id: FYPO:0007273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cortical endoplasmic reticulum (ER) remodeling occurs to a greater extent than normal. Cortical ER remodeling is the dynamic spatial rearrangement of ER tubules near the cell cortex.","definition_xrefs":["PomBase:mah","PMID:32023460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cortical endoplasmic reticulum organization","termid":"FYPO:0007571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cortical endoplasmic reticulum remodeling","synonyms":[{"name":"increased cortical ER remodeling","type":"exact"},{"name":"increased cortical endoplasmic reticulum remodeling during mitotic cell cycle","type":"related"},{"name":"increased cortical endoplasmic reticulum remodeling during vegetative growth","type":"exact"}],"termid":"FYPO:0007273"}


id: PBO:0042034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 88C","termid":"PBO:0042034"}


id: PBO:0057451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR570 host gene","termid":"PBO:0057451"}


id: FYPO:0004000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-cysteine ligase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutamate-cysteine ligase activity","termid":"FYPO:0002853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased glutamate-cysteine ligase activity","termid":"FYPO:0004000"}


id: PBO:0068917
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 160, pseudogene","termid":"PBO:0068917"}


id: GO:1900457
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id: PBO:0077995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha constant","termid":"PBO:0077995"}


id: PBO:0001095
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein Ubx3, Cdc48 cofactor","termid":"PBO:0001095"}


id: PBO:0058845
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8074","termid":"PBO:0058845"}


id: PR:Q9P3T8
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-specific chaperone C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15139:SF0","OMA:SCHPO01455","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-specific chaperone C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.08c","secondary_identifiers":["UniProtKB:Q9P3T8"],"synonyms":[{"name":"CFC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TBCC","type":"exact"},{"name":"tubulin-folding cofactor C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3T8"}


id: PR:000044705
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/Me(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044705"}


id: PBO:0031740
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mating_type_switching","termid":"PBO:0031740"}


id: _global:functionally_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_related_to","secondary_identifiers":["RO:0002328"],"termid":"_global:functionally_related_to"}


id: PBO:0083360
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene RPS2/YGL123W","termid":"PBO:0083360"}


id: PBO:0075316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 7","termid":"PBO:0075316"}


id: PBO:0089840
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Haemolysin-III family plasma membrane receptor implicated in zinc ion homeostasis Izh2","termid":"PBO:0089840"}


id: PBO:0080104
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP15 small subunit processome component","termid":"PBO:0080104"}


id: PBO:0038873
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase complexing protein 1","termid":"PBO:0038873"}


id: PBO:0038357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substance_removed","termid":"PBO:0038357"}


id: PBO:0030660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Man9GlcNAc_level","termid":"PBO:0030660"}


id: GO:0102872
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-palmitoyl-2-linoleoyl-phosphatidylcholine + O2 + a reduced electron acceptor = 1-16:0-2-18:3-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:15538555","GOC:pz","PMID:8102138"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-16:0-2-18:2-phosphatidylcholine desaturase activity (obsolete GO:0102872)","termid":"GO:0102872"}


id: PBO:0017541
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transmembrane transporter (predicted)","termid":"PBO:0017541"}


id: PBO:0031609
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G1_phase_progression","termid":"PBO:0031609"}


id: PBO:0057603
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 940","termid":"PBO:0057603"}


id: PBO:0047222
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 226 member B","termid":"PBO:0047222"}


id: GO:0015849
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id: GO:0140142
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id: GO:1905640
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id: PBO:0066399
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 1 gamma, pseudogene","termid":"PBO:0066399"}


id: PBO:0068409
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNFT1 divergent transcript","termid":"PBO:0068409"}


id: PBO:0052201
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 1","termid":"PBO:0052201"}


id: GO:0004782
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfino-L-alanine = hypotaurine + CO2.","definition_xrefs":["EC:4.1.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"sulfinoalanine decarboxylase activity","secondary_identifiers":["MetaCyc:SULFINOALANINE-DECARBOXYLASE-RXN","RHEA:16877","Reactome:R-HSA-1655443"],"synonyms":[{"name":"3-sulfino-L-alanine carboxy-lyase (hypotaurine-forming)","type":"related"},{"name":"3-sulfino-L-alanine carboxy-lyase activity","type":"related"},{"name":"CADCase/CSADCase activity","type":"related"},{"name":"CSAD","type":"related"},{"name":"CSADCase activity","type":"related"},{"name":"L-cysteinesulfinic acid decarboxylase activity","type":"related"},{"name":"cysteic decarboxylase activity","type":"related"},{"name":"cysteine-sulfinate decarboxylase activity","type":"related"},{"name":"cysteinesulfinate decarboxylase activity","type":"related"},{"name":"cysteinesulfinic acid decarboxylase activity","type":"related"},{"name":"sulfoalanine decarboxylase activity","type":"related"},{"name":"sulphinoalanine decarboxylase activity","type":"exact"}],"termid":"GO:0004782"}


id: PBO:0057701
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1289-1","termid":"PBO:0057701"}


id: PBO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion/proton antiporter Kha1 (predicted)","termid":"PBO:0001153"}


id: GO:2000692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of seed maturation","termid":"GO:2000034"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of seed maturation","termid":"GO:2000692"}


id: GO:1904487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 17alpha-ethynylestradiol stimulus.","definition_xrefs":["PMID:18805421","GO_REF:0000071","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to 17alpha-ethynylestradiol (obsolete GO:1904487)","termid":"GO:1904487"}


id: GO:2000291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myoblast proliferation","termid":"GO:2000291"}


id: PBO:0068443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 17, pseudogene","termid":"PBO:0068443"}


id: PBO:0060711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 8","termid":"PBO:0060711"}


id: GO:0070398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan.","definition_xrefs":["GOC:add","PMID:16020688","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid biosynthetic process","termid":"GO:0019350"},{"relation_name":"is_a","term_name":"wall teichoic acid metabolic process","termid":"GO:0070397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044281","GO:0044085"],"is_obsolete":false,"name":"wall teichoic acid biosynthetic process","synonyms":[{"name":"WTA biosynthetic process","type":"exact"},{"name":"wall teichoic acid anabolism","type":"exact"},{"name":"wall teichoic acid biosynthesis","type":"exact"},{"name":"wall teichoic acid formation","type":"exact"},{"name":"wall teichoic acid synthesis","type":"exact"}],"termid":"GO:0070398"}


id: PBO:0073228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 1","termid":"PBO:0073228"}


id: PBO:0081708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 628","termid":"PBO:0081708"}


id: PBO:0038403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-process_has_causal_agent","termid":"PBO:0038403"}


id: GO:0060837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell, a thin flattened cell that lines the inside surfaces of blood vessels.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell differentiation","termid":"GO:0045446"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}


id: GO:0097565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the caudal and posteriolateral basal bodies located to the left of the right nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["PMID:5961344","PMID:16607022","ISBN:9780124260207","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right middle basal body pair","termid":"GO:0097565"}


id: GO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process allowing for the production of immune receptors whose specificity is not encoded in the germline genomic sequences.","definition_xrefs":["PMID:16166509","ISBN:0781735149","GOC:add","PMID:16102575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors","termid":"GO:0002200"}


id: GO:0102570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: keto-phenylpyruvate + L-tyrosine = L-phenylalanine + 3-(4-hydroxyphenyl)pyruvate.","definition_xrefs":["EC:2.6.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"tyrosine:phenylpyruvate aminotransferase activity","secondary_identifiers":["MetaCyc:RXN-15200"],"termid":"GO:0102570"}


id: GO:0030463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell aging (sensu Fungi) (obsolete GO:0030463)","synonyms":[{"name":"cell aging (sensu Fungi)","type":"exact"}],"termid":"GO:0030463"}


id: PBO:0080325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 89 pseudogene","termid":"PBO:0080325"}


id: PBO:0065673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRT antisense RNA 1","termid":"PBO:0065673"}


id: PR:Q9UTN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ath2 gene.","definition_xrefs":["UniProtKB:Q9UTN2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C139.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.01c","synonyms":[{"name":"Spom972h-ath2","type":"exact"}],"termid":"PR:Q9UTN2"}


id: GO:0043129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of a steady-state level of a surface-active agent that maintains the surface tension of a liquid.","definition_xrefs":["PMID:23708874","PMID:9751757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level chemical homeostasis","termid":"GO:0140962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"surfactant homeostasis","secondary_identifiers":["GO:0050828"],"synonyms":[{"name":"regulation of liquid surface tension","type":"related"},{"name":"regulation of surface tension of a liquid","type":"related"},{"name":"surfactant activity","type":"related"}],"termid":"GO:0043129"}


id: PBO:0071856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 51","termid":"PBO:0071856"}


id: PATO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A relational quality of occurrent inhering in a bearer by virtue of the bearer's ability to consume a resource.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000187 consumption quality (obsolete PATO:0000187)","synonyms":[{"name":"propensity to consume","type":"related"}],"termid":"PATO:0000187"}


id: PBO:0027371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_disulfide_oxidoreductase_activity","termid":"PBO:0027371"}


id: PBO:0038871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aarF domain containing kinase 2","termid":"PBO:0038871"}


id: GO:1901633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle membrane organization","termid":"GO:1901632"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle membrane organization","termid":"GO:0048499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle membrane organization","synonyms":[{"name":"down regulation of SLMV biogenesis","type":"narrow"},{"name":"down regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"down regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"down regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"down-regulation of SLMV biogenesis","type":"narrow"},{"name":"down-regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"down-regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"down-regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"downregulation of SLMV biogenesis","type":"narrow"},{"name":"downregulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"downregulation of synaptic vesicle membrane organization","type":"exact"},{"name":"downregulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"inhibition of SLMV biogenesis","type":"narrow"},{"name":"inhibition of synaptic vesicle membrane organisation","type":"narrow"},{"name":"inhibition of synaptic vesicle membrane organization","type":"narrow"},{"name":"inhibition of synaptic vesicle membrane organization and biogenesis","type":"narrow"},{"name":"negative regulation of SLMV biogenesis","type":"narrow"},{"name":"negative regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"negative regulation of synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:1901633"}


id: PBO:0082385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 5 subunit of the 20S proteasome; responsible for the chymotryptic activity of the proteasome","termid":"PBO:0082385"}


id: GO:1901516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aspyridone A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"aspyridone A metabolic process","synonyms":[{"name":"aspyridone A metabolism","type":"exact"}],"termid":"GO:1901516"}


id: GO:0014054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid secretion","termid":"GO:0014052"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"positively_regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"activation of gamma-aminobutyric acid secretion","type":"narrow"},{"name":"positive regulation of GABA secretion","type":"exact"},{"name":"stimulation of gamma-aminobutyric acid secretion","type":"narrow"},{"name":"up regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid secretion","type":"exact"}],"termid":"GO:0014054"}


id: PBO:0070810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 40","termid":"PBO:0070810"}


id: PBO:0075889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3","termid":"PBO:0075889"}


id: PBO:0059867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 4","termid":"PBO:0059867"}


id: PBO:0078247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 24/OR9-2 (pseudogene)","termid":"PBO:0078247"}


id: GO:0102278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: n H2O + chitin = N,N'-diacetylchitobiose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete N,N'-diacetylchitobiose synthase activity (obsolete GO:0102278)","termid":"GO:0102278"}


id: GO:0000146
data:
  {"annotated_genes":["SJAG_03011","SJAG_00938","SJAG_02431","SJAG_03703","SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93788,99385,104251,112298,113967],"is_not":false,"summary":null,"term":"GO:0000146"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microfilament, driven by ATP hydrolysis.","definition_xrefs":["PMID:29716949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02431":null,"SJAG_03011":null,"SJAG_03703":null,"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003774","GO:0003674"],"is_obsolete":false,"name":"microfilament motor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9023171","Reactome:R-HSA-2316352","GO:0030898","Reactome:R-HSA-432237","EC:5.6.1.8"],"synonyms":[{"name":"actin filament motor activity","type":"exact"},{"name":"actin-activated ATPase activity","type":"exact"},{"name":"actin-dependent ATPase activity","type":"exact"},{"name":"actin-filament motor activity","type":"exact"},{"name":"muscle motor activity","type":"narrow"},{"name":"myosin ATPase activity","type":"related"}],"termid":"GO:0000146","terms_by_termid":{"GO:0000146":null}}


id: MOD:01531
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["Unimod:730#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01531"}


id: PBO:0034529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_onset_of_premeiotic_DNA_replication","termid":"PBO:0034529"}


id: PBO:0045480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 2","termid":"PBO:0045480"}


id: GO:0017130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence of cytosine residues in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-pyrimidine tract binding","termid":"GO:0008187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"poly(C) RNA binding","synonyms":[{"name":"poly(C) binding","type":"broad"},{"name":"poly(rC) binding","type":"exact"}],"termid":"GO:0017130"}


id: PBO:0028244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_SRP-dependent_cotranslational_protein_targeting_to_membrane","termid":"PBO:0028244"}


id: FYPO:0000587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000121","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of sporulation","synonyms":[{"name":"delayed onset of ascospore formation","type":"exact"},{"name":"delayed sporulation","type":"exact"},{"name":"sporulation: delayed","type":"related"}],"termid":"FYPO:0000587"}


id: FYPO:0002059
data:
  {"alleles_by_uniquename":{"SJAG_02409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02409","name":"stc1delta","uniquename":"SJAG_02409:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03916:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03916","name":"chp1delta","uniquename":"SJAG_03916:allele-1"},"SJAG_04061:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04061","name":"arb2delta","uniquename":"SJAG_04061:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002061"}],"single_locus_phenotype":[{"annotations":[115659,115662,115661,115664,115660,115675,115658,115663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002061"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which none of the cells in the population are viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":9,"genes_by_uniquename":{"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03356":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04061":null,"SJAG_04574":null},"genotype_count":9,"genotypes_by_uniquename":{"ago1delta":{"display_name":"ago1delta","display_uniquename":"ago1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]}]},"arb1delta":{"display_name":"arb1delta","display_uniquename":"arb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02594:allele-1","expression":"Null"}]}]},"arb2delta":{"display_name":"arb2delta","display_uniquename":"arb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04061:allele-1","expression":"Null"}]}]},"chp1delta":{"display_name":"chp1delta","display_uniquename":"chp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03916:allele-1","expression":"Null"}]}]},"clr4delta":{"display_name":"clr4delta","display_uniquename":"clr4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]}]},"clr4delta__leo1delta":{"display_name":"clr4delta leo1delta","display_uniquename":"clr4delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"rdp1delta":{"display_name":"rdp1delta","display_uniquename":"rdp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03356:allele-1","expression":"Null"}]}]},"stc1delta":{"display_name":"stc1delta","display_uniquename":"stc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02409:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_04574"],"name":"inviable cell population","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_04061","SJAG_03689","SJAG_02594","SJAG_04574","SJAG_03356","SJAG_03916","SJAG_02409","SJAG_02621"],"single_locus_genotype_uniquenames":["ago1delta","dcr1delta","chp1delta","arb1delta","arb2delta","clr4delta","stc1delta","rdp1delta"],"synonyms":[{"name":"essential","type":"related"},{"name":"lethal in cell population","type":"exact"}],"termid":"FYPO:0002059","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0002061":null}}


id: PBO:0071353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 12","termid":"PBO:0071353"}


id: GO:0061519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of macrophage cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:21727904","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage homeostasis","termid":"GO:0061519"}


id: FYPO:0004649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body during metaphase does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0006825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle pole body during metaphase","synonyms":[{"name":"abolished protein localization to spindle pole body during metaphase during mitotic cell cycle","type":"exact"},{"name":"protein absent from mitotic spindle pole body during metaphase","type":"related"},{"name":"protein localisation to mitotic spindle pole body abolished during metaphase","type":"exact"},{"name":"protein localization to mitotic SPB abolished during metaphase","type":"exact"},{"name":"protein localization to mitotic spindle pole body abolished during metaphase","type":"exact"},{"name":"protein localization to spindle pole body abolished during metaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0004649"}


id: SO:0002344
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mitochondrial SSU rRNA is an RNA component of the small subunit of mitochondrial ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mt_rRNA","termid":"SO:0002128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_SSU_rRNA","synonyms":[{"name":"MT SSU rRNA","type":"exact"},{"name":"mitochondrial SSU rRNA","type":"exact"},{"name":"mitochondrial small subunit rRNA","type":"exact"}],"termid":"SO:0002344"}


id: PBO:0113238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear peptidyl-prolyl cis-trans isomerase (PPIase); impacts expression of multiple genes via its role in nucleosome assembly; catalyzes isomerization of proline residues in histones H3 and H4, which affects lysine methylation of those histones; role in rDNA maintenance; PPIase domain acts as a transcriptional repressor when tethered to DNA by lexA, and repressor activity is dependent on PPIase activity; contains a nucleoplasmin-like fold and can form pentamers","termid":"PBO:0113238"}


id: PBO:0091241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, possible alternative UTR","termid":"PBO:0091241"}


id: PBO:0035712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_methyltransferase_activity","termid":"PBO:0035712"}


id: GO:0009508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circular DNA molecule containing plastid encoded genes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"},{"relation_name":"part_of","term_name":"plastid nucleoid","termid":"GO:0042646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005694"],"is_obsolete":false,"name":"plastid chromosome","termid":"GO:0009508"}


id: PBO:0046907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member B","termid":"PBO:0046907"}


id: PBO:0027518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_horsetail_movement","termid":"PBO:0027518"}


id: PR:O42644
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CTP synthase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.03c","secondary_identifiers":["UniProtKB:O42644"],"synonyms":[{"name":"CTP synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CTPS2","type":"exact"},{"name":"UTP--ammonia ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42644"}


id: GO:0072712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thiabendazole stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to thiabendazole","synonyms":[{"name":"response to TBZ","type":"exact"}],"termid":"GO:0072712"}


id: GO:0002314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell in the spleen acquires the specialized features of a germinal center B cell. Germinal center B cells are rapidly cycling B cells which have downregulated IgD expression and exhibit high levels of binding by peanut agglutinin (PNA).","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germinal center B cell differentiation","synonyms":[{"name":"germinal center B cell development","type":"related"},{"name":"germinal center B lymphocyte differentiation","type":"exact"},{"name":"germinal center B-cell differentiation","type":"exact"},{"name":"germinal center B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002314"}


id: PBO:0090101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Cut9/Apc6","termid":"PBO:0090101"}


id: PBO:0013821
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexadecameric","termid":"PBO:0013821"}


id: PBO:0081470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 343","termid":"PBO:0081470"}


id: GO:0044628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of complement activation by the classical pathway, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of complement activation, classical pathway in another organism (obsolete GO:0044628)","synonyms":[{"name":"positive regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044628"}


id: PBO:0057194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR365B and MIR4725 host gene","termid":"PBO:0057194"}


id: PBO:0012315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal family membrane transporter (predicted)","termid":"PBO:0012315"}


id: PBO:0052113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily C member 1","termid":"PBO:0052113"}


id: PBO:0088680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi mannan polymerase I complex subunit Anp1","termid":"PBO:0088680"}


id: PBO:0034147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_mutualism","termid":"PBO:0034147"}


id: PBO:0053205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 3 binding protein","termid":"PBO:0053205"}


id: PBO:0050283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor serpin domain containing","termid":"PBO:0050283"}


id: FYPO:0002283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, does not occur during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0002283)","synonyms":[{"name":"abolished protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"abolished protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"abolished protein tyrosine phosphorylation during cellular response to heat shock","type":"narrow"},{"name":"protein phosphorylation abolished during cellular response to heat","type":"exact"}],"termid":"FYPO:0002283"}


id: GO:0097299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile, and contributing to plant-type hypersensitive response, the rapid, localized death of plant cells in response to invasion by a pathogen.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete cysteine-type endopeptidase activity involved in plant-type hypersensitive response (obsolete GO:0097299)","synonyms":[{"name":"metacaspase activity involved in plant-type hypersensitive response","type":"narrow"}],"termid":"GO:0097299"}


id: PBO:0090657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 6 Pre5","termid":"PBO:0090657"}


id: PBO:0044437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 2","termid":"PBO:0044437"}


id: PBO:0026657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-heterochromatin_assembly_beyond_boundary_element_IRC1L","termid":"PBO:0026657"}


id: GO:0032547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a purine deoxyribonucleoside, a compound consisting of a purine base linked to deoxyribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside binding","termid":"GO:0001883"},{"relation_name":"is_a","term_name":"deoxyribonucleoside binding","termid":"GO:0032546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"purine deoxyribonucleoside binding","termid":"GO:0032547"}


id: PBO:0074136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A1","termid":"PBO:0074136"}


id: GO:1903398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of m7G(5')pppN diphosphatase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:22323607"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of m7G(5')pppN diphosphatase activity (obsolete GO:1903398)","synonyms":[{"name":"regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"regulation of decapase activity","type":"related"},{"name":"regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:1903398"}


id: GO:0004617
data:
  {"annotated_genes":["SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113012],"is_not":false,"summary":null,"term":"GO:0004617"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphoglycerate + NAD+ = 3-phosphohydroxypyruvate + NADH + H+.","definition_xrefs":["EC:1.1.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phosphoglycerate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-977348","RHEA:12641","MetaCyc:PGLYCDEHYDROG-RXN"],"synonyms":[{"name":"3-phospho-D-glycerate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"3-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"3-phosphoglycerate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"3-phosphoglyceric acid dehydrogenase activity","type":"related"},{"name":"3PHP reductase activity","type":"related"},{"name":"D- and L-HGA","type":"related"},{"name":"D-3-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"D-3-phosphoglycerate:NAD+ oxidoreductase activity","type":"related"},{"name":"PGDH activity","type":"related"},{"name":"SerA","type":"related"},{"name":"SerA 3PG dehydrogenase activity","type":"related"},{"name":"alpha-KG reductase activity","type":"related"},{"name":"alpha-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"alphaKG reductase activity","type":"related"},{"name":"glycerate 3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerate-1,3-phosphate dehydrogenase activity","type":"related"},{"name":"phosphoglycerate oxidoreductase activity","type":"related"},{"name":"phosphoglyceric acid dehydrogenase activity","type":"related"}],"termid":"GO:0004617","terms_by_termid":{"GO:0004617":null}}


id: PBO:0081744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF674 antisense RNA 1 (head to head)","termid":"PBO:0081744"}


id: GO:0043221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein from the structural maintenance of chromosomes (SMC) family, a group of chromosomal ATPases with a role in mitotic chromosome organization.","definition_xrefs":["GOC:jl","InterPro:IPR024704","PMID:9640531","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"SMC family protein binding","synonyms":[{"name":"structural maintenance of chromosomes family protein binding","type":"exact"}],"termid":"GO:0043221"}


id: PR:O74437
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1682.06 gene.","definition_xrefs":["UniProtKB:O74437","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C1682.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.06","synonyms":[{"name":"Spom972h-SPCC1682.06","type":"exact"}],"termid":"PR:O74437"}


id: PBO:0058577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6514","termid":"PBO:0058577"}


id: GO:2000062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ureter smooth muscle cell differentiation.","definition_xrefs":["GOC:yaf","GOC:obol","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell differentiation","termid":"GO:0051151"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of ureter smooth muscle cell differentiation","termid":"GO:2000061"},{"relation_name":"negatively_regulates","term_name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ureter smooth muscle cell differentiation","termid":"GO:2000062"}


id: PBO:0071917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 2","termid":"PBO:0071917"}


id: GO:0046014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of resting T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"regulation of T cell homeostatic proliferation","termid":"GO:0046013"},{"relation_name":"negatively_regulates","term_name":"T cell homeostatic proliferation","termid":"GO:0001777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell homeostatic proliferation","synonyms":[{"name":"down regulation of T cell homeostatic proliferation","type":"exact"},{"name":"down-regulation of T cell homeostatic proliferation","type":"exact"},{"name":"downregulation of T cell homeostatic proliferation","type":"exact"},{"name":"inhibition of T cell homeostatic proliferation","type":"narrow"},{"name":"negative regulation of T lymphocyte homeostatic proliferation","type":"exact"},{"name":"negative regulation of T-cell homeostatic proliferation","type":"exact"},{"name":"negative regulation of T-lymphocyte homeostatic proliferation","type":"exact"},{"name":"negative regulation of resting T cell proliferation","type":"exact"}],"termid":"GO:0046014"}


id: GO:0000338
data:
  {"annotated_genes":["SJAG_04948","SJAG_02341","SJAG_00795","SJAG_03733","SJAG_02764","SJAG_00720","SJAG_03325","SJAG_05977","SJAG_04011","SJAG_00776"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85794,87584,89005,89122,91425,97428,101390,102591,105105,106443],"is_not":false,"summary":null,"term":"GO:0000338"}]},"cv_name":"biological_process","definition":"The removal of a ubiquitin-like protein of the NEDD8 type from a protein.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00720":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_02341":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03733":null,"SJAG_04011":null,"SJAG_04948":null,"SJAG_05977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein deneddylation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010388"],"synonyms":[{"name":"cullin deneddylation","type":"narrow"}],"termid":"GO:0000338","terms_by_termid":{"GO:0000338":null}}


id: PBO:0064555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)","termid":"PBO:0064555"}


id: PBO:0060638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 1","termid":"PBO:0060638"}


id: PBO:0071304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 27","termid":"PBO:0071304"}


id: FYPO:0001280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to oxidative stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to oxidative stress","synonyms":[{"name":"decreased RNA accumulation during cellular response to oxidative stress","type":"related"},{"name":"decreased RNA level during cellular response to DEM","type":"narrow"},{"name":"decreased RNA level during cellular response to diethyl maleate","type":"narrow"},{"name":"decreased RNA level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"decreased RNA level during oxidative stress response","type":"exact"},{"name":"decreased mRNA level during cellular response to oxidative stress","type":"narrow"},{"name":"decreased transcript level during cellular response to oxidative stress","type":"exact"},{"name":"reduced RNA level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0001280"}


id: SO:0000650
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic SSU rRNA is an RNA component of the small subunit of cytosolic ribosomes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_small_subunit_primary_transcript","termid":"SO:0000255"},{"relation_name":"is_a","term_name":"cytosolic_rRNA","termid":"SO:0002343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_SSU_rRNA","synonyms":[{"name":"cytosolic SSU rRNA","type":"exact"},{"name":"cytosolic SSU ribosomal RNA","type":"exact"},{"name":"cytosolic small subunit rRNA","type":"exact"}],"termid":"SO:0000650"}


id: GO:0052674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-pimara-9(11),15-diene + diphosphate.","definition_xrefs":["RHEA:25544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ent-pimara-9(11),15-diene synthase activity","secondary_identifiers":["EC:4.2.3.31","MetaCyc:RXN-9299"],"synonyms":[{"name":"PMD synthase activity","type":"broad"},{"name":"ent-copalyl-diphosphate diphosphate-lyase [ent-pimara-9(11),15-diene-forming] activity","type":"exact"}],"termid":"GO:0052674"}


id: GO:1902446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shade avoidance.","definition_xrefs":["GOC:TermGenie","PMID:23763263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to red or far red light","termid":"GO:2000030"},{"relation_name":"regulates","term_name":"shade avoidance","termid":"GO:0009641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shade avoidance","termid":"GO:1902446"}


id: GO:0051133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer T cell activation.","definition_xrefs":["ISBN:0781735149","PMID:9133426","PMID:12154375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NK T cell activation","synonyms":[{"name":"regulation of NK T lymphocyte activation","type":"exact"},{"name":"regulation of NK T-cell activation","type":"exact"},{"name":"regulation of NK T-lymphocyte activation","type":"exact"},{"name":"regulation of NKT cell activation","type":"exact"},{"name":"regulation of NT cell activation","type":"exact"},{"name":"regulation of natural T cell activation","type":"exact"},{"name":"regulation of natural killer T cell activation","type":"exact"}],"termid":"GO:0051133"}


id: FYPO:0000100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chloramphenicol. Cells stop growing (and may die) at a concentration of chloramphenicol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to chloramphenicol","synonyms":[{"name":"hypersensitive to chloramphenicol","type":"exact"},{"name":"sensitive to chloramphenicol during mitotic cell cycle","type":"related"},{"name":"sensitive to chloramphenicol during vegetative growth","type":"exact"}],"termid":"FYPO:0000100"}


id: FYPO:0001980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA processing is normal (i.e. indistinguishable from wild type). RNA processing is the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.","definition_xrefs":["GO:0006396","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression phenotype","termid":"FYPO:0000142"},{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA processing","synonyms":[{"name":"normal RNA processing during mitotic cell cycle","type":"related"},{"name":"normal RNA processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001980"}


id: GO:1904604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of advanced glycation end-product receptor activity.","definition_xrefs":["PMID:16503878","GO_REF:0000059","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of advanced glycation end-product receptor activity","termid":"GO:1904603"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of advanced glycation end-product receptor activity","synonyms":[{"name":"down regulation of AGE receptor activity","type":"exact"},{"name":"down regulation of RAGE activity","type":"exact"},{"name":"down regulation of advanced glycation end-product receptor activity","type":"exact"},{"name":"down-regulation of AGE receptor activity","type":"exact"},{"name":"down-regulation of RAGE activity","type":"exact"},{"name":"down-regulation of advanced glycation end-product receptor activity","type":"exact"},{"name":"downregulation of AGE receptor activity","type":"exact"},{"name":"downregulation of RAGE activity","type":"exact"},{"name":"downregulation of advanced glycation end-product receptor activity","type":"exact"},{"name":"inhibition of AGE receptor activity","type":"narrow"},{"name":"inhibition of RAGE activity","type":"narrow"},{"name":"inhibition of advanced glycation end-product receptor activity","type":"narrow"},{"name":"negative regulation of AGE receptor activity","type":"exact"},{"name":"negative regulation of RAGE activity","type":"exact"}],"termid":"GO:1904604"}


id: SO:0000742
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A maxicircle is a replicon, part of a kinetoplast, that contains open reading frames and replicates via a rolling circle method.","definition_xrefs":["PMID:8395055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxicircle","secondary_identifiers":["SO:0000827"],"synonyms":[{"name":"maxicircle_chromosome","type":"exact"}],"termid":"SO:0000742"}


id: PBO:0064671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 6","termid":"PBO:0064671"}


id: PBO:0048063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 12","termid":"PBO:0048063"}


id: PBO:0056306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 2","termid":"PBO:0056306"}


id: GO:0019854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ascorbic acid metabolic process","termid":"GO:0019852"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006766","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"L-ascorbic acid catabolic process","secondary_identifiers":["MetaCyc:PWY0-301"],"synonyms":[{"name":"L-ascorbic acid breakdown","type":"exact"},{"name":"L-ascorbic acid catabolism","type":"exact"},{"name":"L-ascorbic acid degradation","type":"exact"},{"name":"ascorbate catabolic process","type":"exact"},{"name":"ascorbate catabolism","type":"exact"},{"name":"vitamin C catabolic process","type":"exact"},{"name":"vitamin C catabolism","type":"exact"}],"termid":"GO:0019854"}


id: PBO:0075633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2C (pseudogene)","termid":"PBO:0075633"}


id: GO:0016966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 ferricytochrome c + nitrous oxide = 2 H+ + 2 ferrocytochrome c + 2 nitric oxide.","definition_xrefs":["EC:1.7.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitric oxide reductase activity","secondary_identifiers":["GO:0016967","KEGG_REACTION:R00294","MetaCyc:NITRIC-OXIDE-REDUCTASE-RXN","GO:0016968","RHEA:30211"],"synonyms":[{"name":"CYP55","type":"narrow"},{"name":"P450 nitric oxide reductase activity","type":"narrow"},{"name":"P450nor","type":"narrow"},{"name":"cytochrome bc nitric oxide reductase activity","type":"narrow"},{"name":"nitric-oxide reductase activity","type":"related"},{"name":"nitrogen oxide reductase activity","type":"related"},{"name":"nitrous-oxide:(acceptor) oxidoreductase (NO-forming)","type":"related"},{"name":"nitrous-oxide:acceptor oxidoreductase (NO-forming)","type":"related"}],"termid":"GO:0016966"}


id: GO:1905802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["PMID:23721876","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to manganese ion","synonyms":[{"name":"regulation of cellular response to manganese","type":"exact"}],"termid":"GO:1905802"}


id: PBO:0040239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 7 interacting protein","termid":"PBO:0040239"}


id: GO:0050728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"negatively_regulates","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of inflammatory response","secondary_identifiers":["GO:0030236"],"synonyms":[{"name":"anti-inflammatory response","type":"exact"},{"name":"down regulation of inflammatory response","type":"exact"},{"name":"down-regulation of inflammatory response","type":"exact"},{"name":"downregulation of inflammatory response","type":"exact"},{"name":"inhibition of inflammatory response","type":"narrow"}],"termid":"GO:0050728"}


id: PBO:0075825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 1 pseudogene 1","termid":"PBO:0075825"}


id: PBO:0078098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 6A","termid":"PBO:0078098"}


id: FYPO:0002925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CRE promoter in a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromosome at CRE promoter","synonyms":[{"name":"decreased protein localisation to chromosome at CRE promoter","type":"exact"},{"name":"decreased protein localization to M26 site","type":"exact"},{"name":"decreased protein localization to chromosome at CRE promoter during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromosome at CRE promoter during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromosome at CRE promoter","type":"exact"}],"termid":"FYPO:0002925"}


id: PBO:0086946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor protein for the cytoplasm-to-vacuole targeting (Cvt) pathway; delivers cargo proteins aminopeptidase I (Ape1p) and alpha-mannosidase (Ams1p) to the phagophore assembly site for packaging into Cvt vesicles; interaction with Atg19p during the Cvt pathway requires phosphorylation by Hrr25p","termid":"PBO:0086946"}


id: PBO:0005235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 activated protein kinase inhibitor Skb15","termid":"PBO:0005235"}


id: PBO:0085631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in fluoride export; nearly identical to FEX2, and deletion of both proteins results in a large increase in fluoride sensitivity compared with the single mutant; contains two FEX domains connected by a linker; part of a widespread family of conserved fluoride export proteins","termid":"PBO:0085631"}


id: FYPO:0007190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is increased along the length of the chromosome arms during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:31483748","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased sister chromatid cohesion along chromosome arms during mitotic interphase","synonyms":[{"name":"increased mitotic sister chromatid cohesion along chromosome arms during interphase","type":"exact"},{"name":"increased sister chromatid cohesion along chromosome arms during interphase of mitotic cell cycle","type":"exact"},{"name":"increased sister chromatid cohesion along chromosome arms during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007190"}


id: PR:O94270
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ER lumen protein-retaining receptor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lumen protein-retaining receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.22","secondary_identifiers":["UniProtKB:O94270"],"synonyms":[{"name":"SPBP8B7.22","type":"related"},{"name":"Spom972h-KDELR1","type":"exact"}],"termid":"PR:O94270"}


id: GO:0106291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + 2 O2 = H+ + NAD+ + 2 superoxide.","definition_xrefs":["RHEA:63184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superoxide-generating NAD(P)H oxidase activity","termid":"GO:0016175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"superoxide-generating NADH oxidase activity","termid":"GO:0106291"}


id: GO:0034055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A symbiont process in which a molecule secreted by the symbiont activates a programmed cell death pathway in the host to suppress the host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense-related programmed cell death","termid":"GO:0034053"},{"relation_name":"is_a","term_name":"symbiont-mediated activation of host programmed cell death","termid":"GO:0052042"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"},{"relation_name":"is_a","term_name":"effector-mediated modulation of host process by symbiont","termid":"GO:0140418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated activation of programmed cell death in host","synonyms":[{"name":"activation by symbiont of host defense-related programmed cell death","type":"narrow"},{"name":"effector-mediated induction of programmed cell death in host","type":"exact"},{"name":"enhancement by symbiont of host defense-related programmed cell death","type":"narrow"},{"name":"positive regulation by symbiont of host defense-related PCD","type":"exact"},{"name":"positive regulation by symbiont of host defense-related programmed cell death","type":"related"},{"name":"stimulation by symbiont of host defense-related programmed cell death","type":"narrow"},{"name":"up regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"up-regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"upregulation by symbiont of host defense-related programmed cell death","type":"exact"}],"termid":"GO:0034055"}


id: GO:0070122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of an isopeptide bond. An isopeptide bond is an amide linkage between a carboxyl group of one amino acid and an amino group of another amino acid in which at least one of these groups is not on the a-carbon of one of the amino acids (for example, the link between an epsilon-amino group of a lysine molecule to a carboxyl group on a second amino acid is an isopeptide bond).","definition_xrefs":["GOC:mah","Wikipedia:Isopeptidase"],"gene_count":0,"genotype_count":0,"name":"obsolete isopeptidase activity (obsolete GO:0070122)","termid":"GO:0070122"}


id: PBO:0052053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 2","termid":"PBO:0052053"}


id: PBO:0060158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 6 (pseudogene)","termid":"PBO:0060158"}


id: PBO:0085071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonhistone component of centromeric chromatin; binds to histone H3 variant, Cse4p, and recruits it to centromeres; involved in the assembly and maintenance of Cse4-H4 at centromeres; required for kinetochore assembly and G2/M progression; may protect Cse4p from ubiquitination; homolog of mammalian HJURP","termid":"PBO:0085071"}


id: PBO:0045672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 intermediate chain 2 pseudogene 1","termid":"PBO:0045672"}


id: GO:1901823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of delta-carotene.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00801","MetaCyc:PWY-5946","PMID:8837512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"delta-carotene metabolic process","termid":"GO:1901822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"delta-carotene catabolic process","synonyms":[{"name":"delta-carotene breakdown","type":"exact"},{"name":"delta-carotene catabolism","type":"exact"},{"name":"delta-carotene degradation","type":"exact"}],"termid":"GO:1901823"}


id: PBO:0074427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 27","termid":"PBO:0074427"}


id: PBO:0061847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OLA1 pseudogene 1","termid":"PBO:0061847"}


id: GO:0015616
data:
  {"annotated_genes":["SJAG_00871","SJAG_03832","SJAG_00980","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85454,89367,99295,109500],"is_not":false,"summary":null,"term":"GO:0015616"}]},"cv_name":"molecular_function","definition":"Generation of movement along a single- or double-stranded DNA molecule, driven by ATP hydrolysis.","definition_xrefs":["PMID:16428451","PMID:17631491","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_00980":null,"SJAG_02460":null,"SJAG_03832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"DNA translocase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015616","terms_by_termid":{"GO:0015616":null}}


id: GO:0017026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the C-terminal propeptide at Ala-Asp in type I and II procollagens and at Arg-Asp in type III.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete procollagen C-endopeptidase activity (obsolete GO:0017026)","synonyms":[{"name":"BMP1","type":"narrow"},{"name":"carboxyprocollagen peptidase activity","type":"related"},{"name":"procollagen C-endopeptidase activity","type":"exact"},{"name":"procollagen C-proteinase activity","type":"related"},{"name":"procollagen C-terminal peptidase activity","type":"related"},{"name":"procollagen C-terminal proteinase activity","type":"related"},{"name":"procollagen carboxy-terminal proteinase activity","type":"related"},{"name":"procollagen carboxypeptidase activity","type":"related"},{"name":"procollagen peptidase activity","type":"related"}],"termid":"GO:0017026"}


id: PBO:0055293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2720","termid":"PBO:0055293"}


id: PBO:0030946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule_cytoskeleton_organization","termid":"PBO:0030946"}


id: PBO:0028582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_cellular_response_to_salt_stress","termid":"PBO:0028582"}


id: PBO:0113060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of small ribosomal subunit (SSU) processome; interacts with the U3 snoRNA (Snr17a/b); involved in rRNA processing and maturation; required post-transcriptionally for efficient retrotransposition; absence results in decreased Ty1 Gag:GFP protein levels; originally isolated as bud-site selection mutant that displays a random budding pattern; ortholog of human NOL7","termid":"PBO:0113060"}


id: PBO:0091351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial expression network (MIOREX) component Mrx11","termid":"PBO:0091351"}


id: GO:0004813
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89847],"is_not":false,"summary":null,"term":"GO:0004813"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala).","definition_xrefs":["EC:6.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140098","GO:0016874","GO:0140101"],"is_obsolete":false,"name":"alanine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380177","RHEA:12540","Reactome:R-HSA-379864","MetaCyc:ALANINE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"Ala-tRNA synthetase activity","type":"related"},{"name":"AlaRS","type":"related"},{"name":"L-alanine:tRNAAla ligase (AMP-forming)","type":"related"},{"name":"alanine tRNA synthetase activity","type":"related"},{"name":"alanine transfer RNA synthetase activity","type":"related"},{"name":"alanine translase activity","type":"related"},{"name":"alanine-transfer RNA ligase activity","type":"related"},{"name":"alanyl-tRNA synthetase activity","type":"exact"},{"name":"alanyl-transfer RNA synthetase activity","type":"related"},{"name":"alanyl-transfer ribonucleate synthase activity","type":"related"},{"name":"alanyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"alanyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004813","terms_by_termid":{"GO:0004813":null}}


id: PR:Q9UU88
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylate kinase isoenzyme 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12595:SF0","PRO:DNx","OMA:SCHPO04983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase isoenzyme 6 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.11c","secondary_identifiers":["UniProtKB:Q9UU88"],"synonyms":[{"name":"AK/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AK6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AK6","type":"exact"},{"name":"dual activity adenylate kinase/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU88"}


id: FYPO:0005348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body (SPB)-led chromosome movement is abnormal. SPB-led chromosome movement is a microtubule-based process in which chromosomes migrate as a result of rapid spindle pole body (SPB) and centrosome oscillations during mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body localization","termid":"FYPO:0000534"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"abnormal SPB-led chromosome movement during mitotic interphase","type":"exact"},{"name":"abnormal maintenance of SPB localization","type":"related"},{"name":"abnormal maintenance of mitotic spindle pole body localization","type":"related"},{"name":"abnormal mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"abnormal mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"abnormal mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"abnormal spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"increased spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0005348"}


id: PBO:0065392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 1","termid":"PBO:0065392"}


id: GO:1904217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CDP-diacylglycerol-serine O-phosphatidyltransferase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:16120614","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","synonyms":[{"name":"regulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"regulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"regulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of PS synthase activity","type":"exact"},{"name":"regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"regulation of phosphatidylserine synthase activity","type":"exact"},{"name":"regulation of phosphatidylserine synthetase activity","type":"exact"},{"name":"regulation of serine exchange enzyme","type":"broad"}],"termid":"GO:1904217"}


id: PBO:0029335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_phosphorylation","termid":"PBO:0029335"}


id: PBO:0034278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_end_sequence","termid":"PBO:0034278"}


id: FYPO:0003988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has actin cortical patches in one or more abnormal locations.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mislocalized actin cortical patches","termid":"FYPO:0006771"},{"relation_name":"output_of","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"mislocalized actin cortical patches during vegetative growth","synonyms":[{"name":"abnormal actin cortical patch location during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch position during vegetative growth","type":"exact"},{"name":"mislocalised actin cortical patches during vegetative growth","type":"exact"},{"name":"mislocalized F-actin patches during vegetative growth","type":"exact"},{"name":"mislocalized actin cortical patches during mitotic cell cycle","type":"related"},{"name":"mislocalized actin patches during vegetative growth","type":"exact"}],"termid":"FYPO:0003988"}


id: GO:1903067
data:
  {"annotated_genes":["SJAG_01373","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87104,91983],"is_not":false,"summary":null,"term":"GO:1903067"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell tip.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24554432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01373":null,"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to cell tip","type":"exact"},{"name":"down regulation of protein localization to cell tip","type":"exact"},{"name":"down-regulation of protein localisation to cell tip","type":"exact"},{"name":"down-regulation of protein localization to cell tip","type":"exact"},{"name":"downregulation of protein localisation to cell tip","type":"exact"},{"name":"downregulation of protein localization to cell tip","type":"exact"},{"name":"inhibition of protein localisation to cell tip","type":"narrow"},{"name":"inhibition of protein localization to cell tip","type":"narrow"},{"name":"negative regulation of protein localisation to cell tip","type":"exact"}],"termid":"GO:1903067","terms_by_termid":{"GO:1903067":null}}


id: GO:0007063
data:
  {"annotated_genes":["SJAG_03591","SJAG_01825","SJAG_00823","SJAG_05978","SJAG_00369","SJAG_01716"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102454,102359,111436,87866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"},{"annotations":[103514,102686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045875"},{"annotations":[103516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905406"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sister chromatid cohesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"regulates","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007063","terms_by_termid":{"GO:0045875":null,"GO:1905406":null,"GO:1905412":null}}


id: PBO:0013053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap130","termid":"PBO:0013053"}


id: PBO:0047846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formyl peptide receptor 2","termid":"PBO:0047846"}


id: GO:0097063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of cadmium (Cd++).","definition_xrefs":["GOC:rs","PMID:19456862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140299"],"is_obsolete":false,"name":"cadmium ion sensor activity","termid":"GO:0097063"}


id: FYPO:0000392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the metaphase/anaphase transition under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell cycle arrest at mitotic metaphase/anaphase transition (obsolete FYPO:0000392)","synonyms":[{"name":"abnormal cell cycle arrest at metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition with condensed chromosomes","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at metaphase/anaphase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase arrest","type":"exact"},{"name":"cell cycle passage through the metaphase-anaphase transition: arrested","type":"related"}],"termid":"FYPO:0000392"}


id: GO:0022624
data:
  {"annotated_genes":["SJAG_03321","SJAG_03638","SJAG_04144","SJAG_04572","SJAG_01489","SJAG_01131","SJAG_04211","SJAG_00766","SJAG_01652","SJAG_03408","SJAG_00738","SJAG_04484","SJAG_00712","SJAG_04477","SJAG_04088","SJAG_01544","SJAG_02900","SJAG_01203","SJAG_02992","SJAG_00762"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106352,109152],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005838"},{"annotations":[101435,111289,106353,109153,100188,113510,92880,103180,95067],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[90286,92528,94926,95068,100463,98222,105419,107334,111259,111367,97769,85023,93231],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"A protein complex, that caps one or both ends of the proteasome core complex and regulates entry into, or exit from, the proteasome core complex.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome complex","termid":"GO:0000502"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome accessory complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022624","terms_by_termid":{"GO:0005838":null,"GO:0008540":null,"GO:0008541":null}}


id: GO:0098702
data:
  {"annotated_genes":["SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108653],"is_not":false,"summary":null,"term":"GO:0098702"}]},"cv_name":"biological_process","definition":"The directed movement of adenine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine transport","termid":"GO:0015853"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transport","termid":"GO:1904823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"adenine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061488"],"synonyms":[{"name":"adenine import into cell","type":"exact"}],"termid":"GO:0098702","terms_by_termid":{"GO:0098702":null}}


id: PBO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase pseudogene","termid":"PBO:0002480"}


id: PBO:0048903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A7","termid":"PBO:0048903"}


id: PBO:0079863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil DNA glycosylase","termid":"PBO:0079863"}


id: GO:0043551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphatidylinositol 3-kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an inositol lipid at the 3' position of the inositol ring.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphatidylinositol 3-kinase activity (obsolete GO:0043551)","synonyms":[{"name":"regulation of phosphoinositide 3-kinase activity","type":"exact"}],"termid":"GO:0043551"}


id: PBO:0048244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12E","termid":"PBO:0048244"}


id: PBO:0089180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane magnesium ion transmembrane transporter Mrs2","termid":"PBO:0089180"}


id: GO:0097067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus.","definition_xrefs":["PMID:9916872","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to thyroid hormone","termid":"GO:0097066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thyroid hormone stimulus","termid":"GO:0097067"}


id: GO:0009537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The precursor of other plastids.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"proplastid","termid":"GO:0009537"}


id: PBO:0072954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stearoyl-CoA desaturase","termid":"PBO:0072954"}


id: PR:Q8TFG9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear envelope pore membrane protein POM 121C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored protein PB15E9.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB15E9.01c","secondary_identifiers":["UniProtKB:Q8TFG9"],"synonyms":[{"name":"Spom972h-POM121C","type":"exact"}],"termid":"PR:Q8TFG9"}


id: GO:0002736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of plasmacytoid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"regulates","term_name":"plasmacytoid dendritic cell cytokine production","termid":"GO:0002373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of plasmacytoid dendritic cell cytokine production","termid":"GO:0002736"}


id: PBO:0052946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRTCAP2 pseudogene 1","termid":"PBO:0052946"}


id: PBO:0091577
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by porcine CFL1","termid":"PBO:0091577"}


id: PBO:0088415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex, cyclin-dependent protein kinase subunit Srb10","termid":"PBO:0088415"}


id: GO:0045730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst","secondary_identifiers":["Wikipedia:Respiratory_burst"],"synonyms":[{"name":"metabolic burst","type":"exact"},{"name":"oxidative burst","type":"exact"}],"termid":"GO:0045730"}


id: FYPO:0001347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any nucleic acid metabolic process in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype","termid":"FYPO:0000292"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"nucleic acid metabolism phenotype during vegetative growth","synonyms":[{"name":"fission yeast nucleic acid metabolism phenotype during vegetative growth","type":"exact"},{"name":"nucleic acid metabolism phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001347"}


id: PATO:0001799
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's exhibiting disturbance of its smoothness or regularity.","definition_xrefs":[".thefreedictionary.com:.thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ruffled","termid":"PATO:0001799"}


id: PBO:0068442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 16, pseudogene","termid":"PBO:0068442"}


id: GO:0034726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled disassembly of chromatin outside the context of DNA replication.","definition_xrefs":["GOC:mah","PMID:17510629"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication-independent nucleosome disassembly (obsolete GO:0034726)","synonyms":[{"name":"DNA replication-independent chromatin disassembly","type":"related"}],"termid":"GO:0034726"}


id: PBO:0064332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 2","termid":"PBO:0064332"}


id: PBO:0034613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_occupancy_at_centromere_central_core","termid":"PBO:0034613"}


id: GO:0048840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the otolith over time, from its formation to the mature structure.","definition_xrefs":["GOC:sr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otolith development","termid":"GO:0048840"}


id: MOD:01870
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification reporter fragment produced by an Applied Biosystems mTRAQ reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mTRAQ reporter fragment","termid":"MOD:01870"}


id: GO:1903110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GO_REF:0000058","GOC:bhm","GOC:TermGenie","PMID:24339919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310","GO:0006281"],"is_obsolete":false,"name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"}


id: PBO:0077602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11D","termid":"PBO:0077602"}


id: PBO:0039867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene","termid":"PBO:0039867"}


id: PBO:0048522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 5","termid":"PBO:0048522"}


id: FYPO:0004167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing glycerol as the carbon source.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0001985","FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on glycerol carbon source","synonyms":[{"name":"increased growth on glycerol carbon source","type":"broad"},{"name":"increased vegetative cell growth on glycerol carbon source","type":"exact"}],"termid":"FYPO:0004167"}


id: GO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy independent passage of toxins, sized less than 1000 Da, across a membrane towards the outside of the cell. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"},{"relation_name":"is_a","term_name":"toxin transmembrane transporter activity","termid":"GO:0019534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"toxin export channel activity","termid":"GO:0000269"}


id: PBO:0066139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB1 divergent transcript","termid":"PBO:0066139"}


id: PBO:0070886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 18","termid":"PBO:0070886"}


id: GO:0047947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + L-glutamine = CoA + alpha-N-phenylacetyl-L-glutamine.","definition_xrefs":["EC:2.3.1.14","MetaCyc:GLUTAMINE-N-PHENYLACETYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamine N-phenylacetyltransferase activity","secondary_identifiers":["RHEA:21844"],"synonyms":[{"name":"glutamine phenylacetyltransferase activity","type":"related"},{"name":"phenylacetyl-CoA:L-glutamine N-acetyltransferase activity","type":"related"},{"name":"phenylacetyl-CoA:L-glutamine alpha-N-phenylacetyltransferase activity","type":"related"}],"termid":"GO:0047947"}


id: GO:0070333
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to the adaptor proteins Shc and Grb2.","definition_xrefs":["PMID:7556090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha6-beta4 integrin-Shc-Grb2 complex","synonyms":[{"name":"ITGA6-ITGB4-SHC-GRB2 complex","type":"narrow"}],"termid":"GO:0070333"}


id: PBO:0042809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"competing endogenous lncRNA 3 for miR-645","termid":"PBO:0042809"}


id: GO:0140070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of hydrogen peroxide through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:23541115","PMID:27256569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"},{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"hydrogen peroxide channel activity","synonyms":[{"name":"hydrogen peroxide transmembrane transporter activity","type":"related"}],"termid":"GO:0140070"}


id: GO:0045503
data:
  {"annotated_genes":["SJAG_02561"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76183],"is_not":false,"summary":null,"term":"GO:0045503"}]},"cv_name":"molecular_function","definition":"Binding to a light chain of the dynein complex.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02561":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dynein light chain binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0045503","terms_by_termid":{"GO:0045503":null}}


id: PBO:0042534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5 regulatory subunit associated protein 1","termid":"PBO:0042534"}


id: PBO:0051280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-13","termid":"PBO:0051280"}


id: PBO:0110239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex midasin subunit Mdn1","termid":"PBO:0110239"}


id: GO:0050590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: desacetoxyvindoline + 2-oxoglutarate + O2 = desacetylvindoline + succinate + CO2.","definition_xrefs":["EC:1.14.11.20","MetaCyc:1.14.11.20-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"desacetoxyvindoline 4-hydroxylase activity","secondary_identifiers":["RHEA:18973","KEGG_REACTION:R05857"],"synonyms":[{"name":"D17H activity","type":"related"},{"name":"deacetoxyvindoline,2-oxoglutarate:oxygen oxidoreductase (4beta-hydroxylating)","type":"related"},{"name":"desacetoxyvindoline,2-oxoglutarate:oxygen oxidoreductase (4-beta-hydroxylating) activity","type":"related"},{"name":"desacetoxyvindoline,2-oxoglutarate:oxygen oxidoreductase (4beta-hydroxylating)","type":"related"},{"name":"desacetoxyvindoline-4-hydroxylase activity","type":"related"},{"name":"desacetyoxyvindoline-17-hydroxylase activity","type":"related"}],"termid":"GO:0050590"}


id: PBO:0074608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 13","termid":"PBO:0074608"}


id: GO:0007455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the eye-antennal disc are generated and organized. This includes the transformation of an eye-antennal imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the eye, antenna, head capsule and maxillary palps.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"eye-antennal disc development","termid":"GO:0035214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye-antennal disc morphogenesis","synonyms":[{"name":"eye-antennal disc metamorphosis","type":"exact"}],"termid":"GO:0007455"}


id: GO:1903291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATP catabolic process.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","PMID:10636900","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ATP catabolic process (obsolete GO:1903291)","synonyms":[{"name":"activation of ATP breakdown","type":"narrow"},{"name":"activation of ATP catabolic process","type":"narrow"},{"name":"activation of ATP catabolism","type":"narrow"},{"name":"activation of ATP degradation","type":"narrow"},{"name":"activation of ATP hydrolysis","type":"narrow"},{"name":"positive regulation of ATP breakdown","type":"exact"},{"name":"positive regulation of ATP catabolism","type":"exact"},{"name":"positive regulation of ATP degradation","type":"exact"},{"name":"positive regulation of ATP hydrolysis","type":"narrow"},{"name":"up regulation of ATP breakdown","type":"exact"},{"name":"up regulation of ATP catabolic process","type":"exact"},{"name":"up regulation of ATP catabolism","type":"exact"},{"name":"up regulation of ATP degradation","type":"exact"},{"name":"up regulation of ATP hydrolysis","type":"narrow"},{"name":"up-regulation of ATP breakdown","type":"exact"},{"name":"up-regulation of ATP catabolic process","type":"exact"},{"name":"up-regulation of ATP catabolism","type":"exact"},{"name":"up-regulation of ATP degradation","type":"exact"},{"name":"up-regulation of ATP hydrolysis","type":"narrow"},{"name":"upregulation of ATP breakdown","type":"exact"},{"name":"upregulation of ATP catabolic process","type":"exact"},{"name":"upregulation of ATP catabolism","type":"exact"},{"name":"upregulation of ATP degradation","type":"exact"},{"name":"upregulation of ATP hydrolysis","type":"narrow"}],"termid":"GO:1903291"}


id: PBO:0067722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 20","termid":"PBO:0067722"}


id: GO:0046718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a symbiont breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the symbiont or its genome is released into the host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host","termid":"GO:0044409"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell","secondary_identifiers":["GO:0019063","VZ:936"],"synonyms":[{"name":"entry of virus into host cell","type":"narrow"},{"name":"phage translocation","type":"narrow"},{"name":"viral entry into host cell","type":"narrow"},{"name":"viral penetration","type":"narrow"},{"name":"virion penetration","type":"narrow"},{"name":"virion penetration into host cell","type":"narrow"},{"name":"virus entry into host cell","type":"narrow"}],"termid":"GO:0046718"}


id: PBO:0047336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 2","termid":"PBO:0047336"}


id: GO:0045218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining the zonula adherens junction, the cell-cell adherens junction formed near the apex of epithelial cells.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction maintenance","termid":"GO:0034334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zonula adherens maintenance","termid":"GO:0045218"}


id: PBO:0085128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein implicated in ribosome biogenesis; deletion extends chronological lifespan","termid":"PBO:0085128"}


id: GO:1900268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reverse transcription.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"regulates","term_name":"reverse transcription","termid":"GO:0001171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of reverse transcription","termid":"GO:1900268"}


id: PBO:0057318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518e","termid":"PBO:0057318"}


id: GO:1903783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion import across the plasma membrane.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","PMID:19376779","GO_REF:0000058","GOC:nc","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transport","termid":"GO:1902306"},{"relation_name":"is_a","term_name":"regulation of sodium ion import across plasma membrane","termid":"GO:1903782"},{"relation_name":"negatively_regulates","term_name":"sodium ion import across plasma membrane","termid":"GO:0098719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of sodium ion import across plasma membrane","synonyms":[{"name":"down regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"down-regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"downregulation of sodium ion import across plasma membrane","type":"exact"},{"name":"inhibition of sodium ion import across plasma membrane","type":"narrow"}],"termid":"GO:1903783"}


id: PBO:0018127
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coffin-Lowry Syndrome","termid":"PBO:0018127"}


id: GO:0000963
data:
  {"annotated_genes":["SJAG_00865","SJAG_02991","SJAG_03104","SJAG_02526","SJAG_01704","SJAG_00997","SJAG_06586","SJAG_00077","SJAG_04113","SJAG_00428","SJAG_00255","SJAG_04700","SJAG_00797","SJAG_02288","SJAG_00358","SJAG_04367","SJAG_04885","SJAG_02302"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99729],"is_not":false,"summary":null,"term":"GO:0000963"},{"annotations":[92381,106719,86114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090615"},{"annotations":[106009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140040"},{"annotations":[110536,95075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000965"},{"annotations":[110000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000964"},{"annotations":[114004,83910,106010,79216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[97494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[110350,114690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[90395,113058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[104584,88918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"}]},"cv_name":"biological_process","definition":"The conversion of a primary RNA molecule transcribed from a mitochondrial genome into one or more mature RNA molecules; occurs in the mitochondrion.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"mitochondrial gene expression","termid":"GO:0140053"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00255":null,"SJAG_00358":null,"SJAG_00428":null,"SJAG_00797":null,"SJAG_00865":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_02526":null,"SJAG_02991":null,"SJAG_03104":null,"SJAG_04113":null,"SJAG_04367":null,"SJAG_04700":null,"SJAG_04885":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0140053","GO:0008150"],"is_obsolete":false,"name":"mitochondrial RNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000963","terms_by_termid":{"GO:0000963":null,"GO:0000964":null,"GO:0000965":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0090615":null,"GO:0140040":null,"GO:1990180":null,"GO:1990799":null}}


id: PR:O59816
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23151:SF9","OMA:SCHPO04244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.07","secondary_identifiers":["UniProtKB:O59816"],"synonyms":[{"name":"PDC-E2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PDCE2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DLAT","type":"exact"},{"name":"dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pyruvate dehydrogenase complex component E2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59816"}


id: GO:0072166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the posterior mesonephric tubule over time, from its initial formation to the mature structure. The posterior mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior mesonephric tubule development","termid":"GO:0072166"}


id: PBO:0078274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-2","termid":"PBO:0078274"}


id: GO:0000263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Subunit of a heterotrimeric G-protein GTPase that contains the guanine nucleotide binding site and possesses GTPase activity.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete heterotrimeric G-protein GTPase, alpha-subunit (obsolete GO:0000263)","synonyms":[{"name":"heterotrimeric G-protein GTPase, alpha-subunit","type":"exact"}],"termid":"GO:0000263"}


id: MOD:01284
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:10825247","PubMed:9254591","Unimod:206#C","PubMed:15541752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrolein addition +56","termid":"MOD:00557"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +56 - site C","synonyms":[{"name":"Acrolein addition +56","type":"related"},{"name":"Delta:H(4)C(3)O(1)","type":"related"}],"termid":"MOD:01284"}


id: PBO:0078613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64D, pseudogene","termid":"PBO:0078613"}


id: PATO:0000559
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000559 absolute size value (obsolete PATO:0000559)","termid":"PATO:0000559"}


id: GO:1904925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of autophagy of the mitochondrion in response to mitochondrial depolarization.","definition_xrefs":["GOC:pad","GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:22020285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion in response to mitochondrial depolarization","termid":"GO:1904923"},{"relation_name":"positively_regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0007005","GO:0044248"],"is_obsolete":false,"name":"positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization","synonyms":[{"name":"activation of mitophagy in response to mitochondrial depolarization","type":"narrow"},{"name":"up regulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"up-regulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"upregulation of mitophagy in response to mitochondrial depolarization","type":"exact"}],"termid":"GO:1904925"}


id: PBO:0070305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 11","termid":"PBO:0070305"}


id: PBO:0080111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urotensin 2B","termid":"PBO:0080111"}


id: GO:1901430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of syringal lignin biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of syringal lignin biosynthetic process","termid":"GO:1901428"},{"relation_name":"positively_regulates","term_name":"syringal lignin biosynthetic process","termid":"GO:1901066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of syringal lignin biosynthetic process","synonyms":[{"name":"activation of S-lignin biosynthetic process","type":"exact"},{"name":"activation of syringal lignin anabolism","type":"exact"},{"name":"activation of syringal lignin biosynthesis","type":"exact"},{"name":"activation of syringal lignin biosynthetic process","type":"narrow"},{"name":"activation of syringal lignin formation","type":"exact"},{"name":"activation of syringal lignin synthesis","type":"exact"},{"name":"positive regulation of S-lignin biosynthetic process","type":"exact"},{"name":"positive regulation of syringal lignin anabolism","type":"exact"},{"name":"positive regulation of syringal lignin biosynthesis","type":"exact"},{"name":"positive regulation of syringal lignin formation","type":"exact"},{"name":"positive regulation of syringal lignin synthesis","type":"exact"},{"name":"up regulation of S-lignin biosynthetic process","type":"exact"},{"name":"up regulation of syringal lignin anabolism","type":"exact"},{"name":"up regulation of syringal lignin biosynthesis","type":"exact"},{"name":"up regulation of syringal lignin biosynthetic process","type":"exact"},{"name":"up regulation of syringal lignin formation","type":"exact"},{"name":"up regulation of syringal lignin synthesis","type":"exact"},{"name":"up-regulation of S-lignin biosynthetic process","type":"exact"},{"name":"up-regulation of syringal lignin anabolism","type":"exact"},{"name":"up-regulation of syringal lignin biosynthesis","type":"exact"},{"name":"up-regulation of syringal lignin biosynthetic process","type":"exact"},{"name":"up-regulation of syringal lignin formation","type":"exact"},{"name":"up-regulation of syringal lignin synthesis","type":"exact"},{"name":"upregulation of S-lignin biosynthetic process","type":"exact"},{"name":"upregulation of syringal lignin anabolism","type":"exact"},{"name":"upregulation of syringal lignin biosynthesis","type":"exact"},{"name":"upregulation of syringal lignin biosynthetic process","type":"exact"},{"name":"upregulation of syringal lignin formation","type":"exact"},{"name":"upregulation of syringal lignin synthesis","type":"exact"}],"termid":"GO:1901430"}


id: GO:0019227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The propagation of an action potential along an axon, away from the soma.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"is_a","term_name":"action potential propagation","termid":"GO:0098870"},{"relation_name":"part_of","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal action potential propagation","termid":"GO:0019227"}


id: PBO:0040356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 5","termid":"PBO:0040356"}


id: PBO:0084399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lumazine synthase (DMRL synthase); catalyzes synthesis of immediate precursor to riboflavin; DMRL synthase stands for 6,7-dimethyl-8-ribityllumazine synthase","termid":"PBO:0084399"}


id: PBO:0088085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX (ubiquitin regulatory X) domain-containing protein; interacts with Cdc48p, transcription is repressed when cells are grown in media containing inositol and choline; UBX6 has a paralog, UBX7, that arose from the whole genome duplication","termid":"PBO:0088085"}


id: GO:0035338
data:
  {"annotated_genes":["SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103580],"is_not":false,"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a long-chain fatty-acyl-CoA any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty-acyl-CoA metabolic process","termid":"GO:0035336"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0006790","GO:0006629"],"is_obsolete":false,"name":"long-chain fatty-acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"long-chain fatty acyl CoA biosynthetic process","type":"exact"},{"name":"long-chain fatty-acyl-CoA anabolism","type":"exact"},{"name":"long-chain fatty-acyl-CoA biosynthesis","type":"exact"},{"name":"long-chain fatty-acyl-CoA formation","type":"exact"},{"name":"long-chain fatty-acyl-CoA synthesis","type":"exact"}],"termid":"GO:0035338","terms_by_termid":{"GO:0035338":null}}


id: FYPO:0001639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-methionine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular sulfur level","termid":"FYPO:0001544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular methionine level","synonyms":[{"name":"normal cellular L-methionine level","type":"exact"},{"name":"normal cellular methionine level during mitotic cell cycle","type":"related"},{"name":"normal cellular methionine level during vegetative growth","type":"exact"},{"name":"normal level of methionine in cell","type":"exact"}],"termid":"FYPO:0001639"}


id: PBO:0078159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 37 (pseudogene)","termid":"PBO:0078159"}


id: PBO:0064936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase domain and WD repeat containing 1","termid":"PBO:0064936"}


id: SO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A constant (C) gene, a gene that codes the constant region of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_C_gene","synonyms":[{"name":"IGC_gene","type":"exact"},{"name":"Immunoglobulin_Constant_germline_Gene","type":"exact"},{"name":"immunoglobulin_C_gene","type":"exact"}],"termid":"SO:0002123"}


id: GO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus during erythrocyte maturation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enucleation","termid":"GO:0090601"},{"relation_name":"part_of","term_name":"enucleate erythrocyte maturation","termid":"GO:0043354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte enucleation","termid":"GO:0043131"}


id: GO:0072217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of metanephros development. Metanephros development is the process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"negatively_regulates","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephros development","termid":"GO:0072217"}


id: PBO:0071960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A1","termid":"PBO:0071960"}


id: PBO:0085577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 2'-O-methylation of C32 of substrate tRNAs; interacts with 2'-O-ribose methyltransferase Trm7p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; non-essential gene; yeast null mutant can be functionally complemented by human THADA, mutations in which have been implicated in epithelial thyroid adenomas, type 2 diabetes, and polycystic ovary syndrome (PCOS)","termid":"PBO:0085577"}


id: PBO:0062273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 4 pseudogene","termid":"PBO:0062273"}


id: PBO:0055233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2660","termid":"PBO:0055233"}


id: PBO:0064120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 2, transient receptor potential cation channel","termid":"PBO:0064120"}


id: GO:0031944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid metabolic process","termid":"GO:0031943"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"negatively_regulates","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of glucocorticoid metabolic process","synonyms":[{"name":"down regulation of glucocorticoid metabolic process","type":"exact"},{"name":"down-regulation of glucocorticoid metabolic process","type":"exact"},{"name":"downregulation of glucocorticoid metabolic process","type":"exact"},{"name":"inhibition of glucocorticoid metabolic process","type":"narrow"},{"name":"negative regulation of glucocorticoid metabolism","type":"exact"}],"termid":"GO:0031944"}


id: PBO:0074584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 2C","termid":"PBO:0074584"}


id: PBO:0039349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy and beclin 1 regulator 1","termid":"PBO:0039349"}


id: PR:O74364
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion defective protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.03c","synonyms":[{"name":"Spom972h-adn1","type":"exact"}],"termid":"PR:O74364"}


id: GO:0015795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sorbitol across a membrane. Sorbitol, also known as glucitol, is the hexitol derived by the reduction of the aldehyde group of glucose.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"sorbitol transmembrane transport","synonyms":[{"name":"glucitol transport","type":"exact"},{"name":"sorbitol transport","type":"broad"}],"termid":"GO:0015795"}


id: GO:1901769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carbapenem.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00182","PMID:9402024","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic biosynthetic process","termid":"GO:0030654"},{"relation_name":"is_a","term_name":"carbapenem metabolic process","termid":"GO:1901767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"carbapenem biosynthetic process","synonyms":[{"name":"carbapenem anabolism","type":"exact"},{"name":"carbapenem biosynthesis","type":"exact"},{"name":"carbapenem formation","type":"exact"},{"name":"carbapenem synthesis","type":"exact"}],"termid":"GO:1901769"}


id: PBO:0075075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 125","termid":"PBO:0075075"}


id: GO:0045272
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A subcomplex of the respiratory chain located in the plasma membrane. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone. Examples of this component are found in bacterial species.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respiratory chain complex I (obsolete GO:0045272)","synonyms":[{"name":"NADH dehydrogenase (ubiquinone) complex","type":"broad"},{"name":"respiratory chain complex I","type":"broad"}],"termid":"GO:0045272"}


id: GO:0060297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"sarcomere organization","termid":"GO:0045214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"regulation of sarcomere organization","synonyms":[{"name":"regulation of sarcomere organisation","type":"exact"}],"termid":"GO:0060297"}


id: PR:O94693
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CD2 cytoplasmic tail-binding protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02904","PANTHER:PTHR13138:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIN1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.09c","secondary_identifiers":["UniProtKB:O94693"],"synonyms":[{"name":"Spom972h-CD2BP2","type":"exact"}],"termid":"PR:O94693"}


id: PBO:0066375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 2","termid":"PBO:0066375"}


id: PBO:0087406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase; assists Cdc48p in the dislocation of misfolded, polyubiquitinated ERAD substrates that are subsequently delivered to the proteasome for degradation; also involved in the regulated destruction of resident ER membrane proteins, such as HMG-CoA reductase (Hmg1/2p) and cytoplasmic proteins (Fbp1p); role in mobilizing membrane bound transcription factors by regulated ubiquitin/proteasome-dependent processing (RUP)","termid":"PBO:0087406"}


id: PBO:0042943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD2 adjacent suppressive regulatory RNA","termid":"PBO:0042943"}


id: PBO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"appears to be part of transcript of adjacent gene","termid":"PBO:0002159"}


id: PBO:0089020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-methyltransferase Trm13","termid":"PBO:0089020"}


id: PBO:0068372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF157 antisense RNA 1","termid":"PBO:0068372"}


id: PBO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 4 (pseudogene)","termid":"PBO:0060156"}


id: PBO:0063310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCGF3 antisense RNA 1","termid":"PBO:0063310"}


id: PR:Q9USP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug1 gene.","definition_xrefs":["UniProtKB:Q9USP4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 1 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.03","synonyms":[{"name":"Spom972h-mug1","type":"exact"}],"termid":"PR:Q9USP4"}


id: PBO:0046293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMP2 pseudogene 1","termid":"PBO:0046293"}


id: PBO:0054783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2196","termid":"PBO:0054783"}


id: PBO:0000530
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.2","termid":"PBO:0000530"}


id: PBO:0113186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity vacuolar phosphate transporter; exports phosphate from vacuolar lumen to cytosol; regulates phosphate and polyphosphate metabolism; acts upstream of Pho81p in regulation of PHO pathway; localizes to sites of contact between vacuole and mitochondria (vCLAMPs); targeted to vacuole via AP-3 pathway; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth","termid":"PBO:0113186"}


id: PBO:0040456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 11C","termid":"PBO:0040456"}


id: SO:0001456
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A relatively rare amino acid encoded by the codon UAG in some contexts, whereas UAG is a termination codon in other contexts.","definition_xrefs":["PMID:15788401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrrolysine","synonyms":[{"name":"O","type":"exact"},{"name":"Pyl","type":"exact"}],"termid":"SO:0001456"}


id: FYPO:0006933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of butylated hydroxytoluene (dibutylhydroxytoluene; BHT) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to butylated hydroxytoluene","synonyms":[{"name":"resistance to 2,6-di-tert-butyl-4-methylphenol","type":"exact"},{"name":"resistance to BHT","type":"exact"},{"name":"resistance to butylated hydroxytoluene during mitotic cell cycle","type":"related"},{"name":"resistance to butylated hydroxytoluene during vegetative growth","type":"exact"},{"name":"resistance to dibutylhydroxytoluene","type":"exact"},{"name":"resistant to BHT","type":"exact"},{"name":"resistant to butylated hydroxytoluene","type":"exact"}],"termid":"FYPO:0006933"}


id: PBO:0013744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family membrane transporter Mfs2 (predicted)","termid":"PBO:0013744"}


id: PBO:0018179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic (sorulation) septin Spn6","termid":"PBO:0018179"}


id: GO:0010751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of nitric oxide mediated signal transduction. Nitric oxide mediated signal transduction is The series of molecular signals mediated by the detection of nitric oxide (NO).","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitric oxide mediated signal transduction","termid":"GO:0010749"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nitric oxide mediated signal transduction","synonyms":[{"name":"negative regulation of nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0010751"}


id: GO:0020002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane surrounding a host cell.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell plasma membrane","termid":"GO:0020002"}


id: PBO:0060929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 5","termid":"PBO:0060929"}


id: GO:0030121
data:
  {"annotated_genes":["SJAG_00379","SJAG_01809","SJAG_04565","SJAG_04609"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97242,108890,109108,114946],"is_not":false,"summary":null,"term":"GO:0030121"}]},"cv_name":"cellular_component","definition":"A heterotetrameric AP-type membrane coat adaptor complex that consists of beta1, gamma, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-1-containing coats are normally found primarily in the trans-Golgi network. In at least humans, the AP-1 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (gamma1 and gamma2, mu1A and mu1B, and sigma1A, sigma1B and sigma1C).","definition_xrefs":["PMID:10611976","GOC:mah","PMID:21097499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin adaptor complex","termid":"GO:0030131"},{"relation_name":"part_of","term_name":"clathrin coat of trans-Golgi network vesicle","termid":"GO:0030130"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01809":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0032991","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"AP-1 adaptor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AP-1 related adapter complex","type":"related"},{"name":"HA1","type":"exact"},{"name":"HA1 clathrin adaptor","type":"exact"}],"termid":"GO:0030121","terms_by_termid":{"GO:0030121":null}}


id: PBO:0067971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 273","termid":"PBO:0067971"}


id: PBO:0068966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 210, pseudogene","termid":"PBO:0068966"}


id: PBO:0072551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pseudouridine synthase D3","termid":"PBO:0072551"}


id: PBO:0028492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_post-anaphase_array","termid":"PBO:0028492"}


id: PBO:0044976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 16","termid":"PBO:0044976"}


id: PBO:0078669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-4","termid":"PBO:0078669"}


id: PBO:0051646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 1","termid":"PBO:0051646"}


id: RO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity influences the severity with which a condition manifests in an individual.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_condition","termid":"RO:0003304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_severity_of_condition","termid":"RO:0003305"}


id: PBO:0089053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb3","termid":"PBO:0089053"}


id: PBO:0055644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3083","termid":"PBO:0055644"}


id: GO:1904977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a lymphatic endothelial cell from one site to another in the wall of a lymphatic vessel.","definition_xrefs":["GO_REF:0000091","PMID:25745057","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell migration","termid":"GO:0043542"},{"relation_name":"part_of","term_name":"lymph vessel morphogenesis","termid":"GO:0036303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphatic endothelial cell migration","termid":"GO:1904977"}


id: GO:0097478
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the two layers of lipid molecules that constitute a membrane.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane","termid":"GO:0016020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"leaflet of membrane bilayer","synonyms":[{"name":"membrane leaflet","type":"exact"}],"termid":"GO:0097478"}


id: SO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute to describe a feature that is independently known - not predicted.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"independently_known","synonyms":[{"name":"independently known","type":"exact"}],"termid":"SO:0000906"}


id: PBO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-conjugate-exporting ATPase Abc2","termid":"PBO:0001764"}


id: PBO:0068957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 201, pseudogene","termid":"PBO:0068957"}


id: PBO:0081780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 707","termid":"PBO:0081780"}


id: PATO:0001961
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's touching another entity.","definition_xrefs":["PATOC:wdahdul"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in contact with","synonyms":[{"name":"contiguous","type":"related"}],"termid":"PATO:0001961"}


id: PBO:0075318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOD1 divergent transcript","termid":"PBO:0075318"}


id: GO:0035005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4-phosphate + ATP = 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.154","RHEA:18373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"1-phosphatidylinositol-4-phosphate 3-kinase activity","secondary_identifiers":["Reactome:R-HSA-8868072","KEGG_REACTION:R05795","MetaCyc:2.7.1.154-RXN","Reactome:R-HSA-1676206","Reactome:R-HSA-1676109","Reactome:R-HSA-1675928"],"synonyms":[{"name":"ATP:1-phosphatidyl-1D-myo-inositol-4-phosphate 3-phosphotransferase activity","type":"related"},{"name":"C2-domain-containing phosphoinositide 3-kinase activity","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class I","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"narrow"},{"name":"phosphatidylinositol 3-kinase, class I, catalyst activity","type":"narrow"},{"name":"phosphatidylinositol-4-phosphate 3-kinase activity","type":"exact"},{"name":"type II phosphoinositide 3-kinase activity","type":"related"}],"termid":"GO:0035005"}


id: PBO:0042769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 72","termid":"PBO:0042769"}


id: GO:0004596
data:
  {"annotated_genes":["SJAG_04631","SJAG_04179","SJAG_01826","SJAG_04131","SJAG_03537","SJAG_02726"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99703,106530,111445,114068],"is_not":false,"summary":null,"term":"GO:0004596"},{"annotations":[85553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990190"},{"annotations":[85554,114622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990189"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + peptide = CoA + N-alpha-acetylpeptide. This reaction is the acetylation of the N-terminal amino acid residue of a peptide or protein.","definition_xrefs":["PMID:30054468","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide N-acetyltransferase activity","termid":"GO:0034212"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01826":null,"SJAG_02726":null,"SJAG_03537":null,"SJAG_04131":null,"SJAG_04179":null,"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674","GO:0034212"],"is_obsolete":false,"name":"peptide alpha-N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.255","Reactome:R-HSA-6814090"],"synonyms":[{"name":"N(alpha)-acetyltransferase activity","type":"related"},{"name":"NAT activity","type":"related"},{"name":"acetyl-CoA:peptide alpha-N-acetyltransferase activity","type":"exact"},{"name":"acetyl-CoA:peptide nalpha-acetyltransferase activity","type":"exact"},{"name":"amino-terminal amino acid-acetylating enzyme activity","type":"related"},{"name":"beta-endorphin acetyltransferase activity","type":"narrow"},{"name":"nalpha-acetyltransferase activity","type":"exact"},{"name":"peptide acetyltransferase activity","type":"related"},{"name":"protein N-terminal acetyltransferase activity","type":"exact"}],"termid":"GO:0004596","terms_by_termid":{"GO:0004596":null,"GO:1990189":null,"GO:1990190":null}}


id: GO:0009017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-succinyl-L-glutamate + H2O = L-glutamate + succinate.","definition_xrefs":["EC:3.5.1.96","RHEA:15169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"succinylglutamate desuccinylase activity","secondary_identifiers":["KEGG_REACTION:R00411","MetaCyc:SUCCGLUDESUCC-RXN"],"synonyms":[{"name":"AstE","type":"related"},{"name":"N-succinyl-L-glutamate amidohydrolase activity","type":"related"},{"name":"N2-succinylglutamate desuccinylase activity","type":"exact"},{"name":"SGDS","type":"related"}],"termid":"GO:0009017"}


id: PBO:0027767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytosolic_calcium_level","termid":"PBO:0027767"}


id: PBO:0054754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2165","termid":"PBO:0054754"}


id: PR:O14019
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase hal4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.16","secondary_identifiers":["UniProtKB:O14019"],"synonyms":[{"name":"Spom972h-CDK16","type":"exact"},{"name":"halotolerance protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine/threonine-protein kinase ppk10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14019"}


id: PBO:0088083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein that interacts with Cdc48p; ubiquitin regulatory X is also known as UBX","termid":"PBO:0088083"}


id: GO:0102920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octanoyl-CoA + isopenicillin N + H2O = H+ + coenzyme A + penicillin K + L-2-aminoadipate.","definition_xrefs":["EC:2.3.1.164","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"acyl coenzyme A: isopenicillin N acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8809"],"termid":"GO:0102920"}


id: GO:0007621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the receptiveness of a female to male advances.","definition_xrefs":["GOC:bf","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female receptivity","termid":"GO:0045924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of female receptivity","synonyms":[{"name":"down regulation of female receptivity","type":"exact"},{"name":"down-regulation of female receptivity","type":"exact"},{"name":"downregulation of female receptivity","type":"exact"},{"name":"inhibition of female receptivity","type":"narrow"}],"termid":"GO:0007621"}


id: GO:0035376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a sterol into a cell or organelle. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["PMID:19793923","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sterol import","synonyms":[{"name":"sterol influx","type":"exact"},{"name":"sterol uptake","type":"exact"}],"termid":"GO:0035376"}


id: FYPO:0005244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing arabinose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth on arabinose carbon source","synonyms":[{"name":"decreased growth on arabinose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on arabinose carbon source","type":"exact"},{"name":"reduced cell growth on arabinose carbon source","type":"related"},{"name":"slow cell growth on arabinose carbon source","type":"narrow"}],"termid":"FYPO:0005244"}


id: PBO:0053054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINC00240 antisense RNA regulating promoter methylation","termid":"PBO:0053054"}


id: PBO:0049803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocretin receptor 2","termid":"PBO:0049803"}


id: PBO:0072937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 17","termid":"PBO:0072937"}


id: PBO:0011121
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Chromsome segregation in Meiosis","termid":"PBO:0011121"}


id: PBO:0075250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 2","termid":"PBO:0075250"}


id: GO:0004855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xanthine + H2O + O2 = urate + hydrogen peroxide.","definition_xrefs":["EC:1.17.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"xanthine oxidase activity","secondary_identifiers":["UM-BBD_enzymeID:e0781","RHEA:21132","Reactome:R-HSA-74258","Reactome:R-HSA-9748991","MetaCyc:XANTHINE-OXIDASE-RXN"],"synonyms":[{"name":"Schardinger enzyme activity","type":"related"},{"name":"hypoxanthine-xanthine oxidase activity","type":"broad"},{"name":"schardinger enzyme","type":"related"},{"name":"xanthine oxidoreductase activity","type":"broad"},{"name":"xanthine:O2 oxidoreductase activity","type":"related"},{"name":"xanthine:oxygen oxidoreductase activity","type":"related"},{"name":"xanthine:xanthine oxidase activity","type":"related"}],"termid":"GO:0004855"}


id: PBO:0074337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2","termid":"PBO:0074337"}


id: GO:0035227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of glutamate-cysteine ligase.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ligase activity","termid":"GO:0051340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glutamate-cysteine ligase activity","termid":"GO:0035227"}


id: PBO:0082766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SMC5-SMC6 complex; this complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; protein abundance increases in response to DNA replication stress","termid":"PBO:0082766"}


id: SO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion from the Line1 family of mobile elements.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L1_LINE_retrotransposon","termid":"SO:0002272"},{"relation_name":"is_a","term_name":"mobile_element_insertion","termid":"SO:0001837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE1_insertion","synonyms":[{"name":"line1 insertion","type":"related"}],"termid":"SO:0002064"}


id: PBO:0071232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 73","termid":"PBO:0071232"}


id: MOD:01221
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-formyl-L-threonine.","definition_xrefs":["PubMed:15799070","Unimod:122#T","PubMed:11861642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-formylated residue","termid":"MOD:01483"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-formyl-L-threonine","synonyms":[{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"}],"termid":"MOD:01221"}


id: GO:0047057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phylloquinol + a protein with a disulfide bond = phylloquinone + a protein with reduced L-cysteine residues.","definition_xrefs":["RHEA:57744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor","termid":"GO:0016728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"vitamin-K-epoxide reductase (warfarin-sensitive) activity","secondary_identifiers":["Reactome:R-HSA-159790","EC:1.17.4.4","MetaCyc:1.1.4.1-RXN","Reactome:R-HSA-6806647"],"synonyms":[{"name":"phylloquinone epoxide reductase activity","type":"related"},{"name":"vitamin K1 epoxide reductase activity","type":"narrow"}],"termid":"GO:0047057"}


id: PBO:0076939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIP11 divergent transcript","termid":"PBO:0076939"}


id: PBO:0065409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 7","termid":"PBO:0065409"}


id: PBO:0077659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF10A antisense RNA 1","termid":"PBO:0077659"}


id: PATO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flexibility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"flexible","termid":"PATO:0001544"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased flexibility","synonyms":[{"name":"low flexibility","type":"exact"}],"termid":"PATO:0001777"}


id: PBO:0083415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the essential ORF SEC61/YLR378C","termid":"PBO:0083415"}


id: MOD:00255
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-histidine residue and an L-tyrosine residue by a carbon-nitrogen bond to form 3-(3'-L-histidyl)-L-tyrosine.","definition_xrefs":["PubMed:9144772","RESID:AA0250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(3'-L-histidyl)-L-tyrosine","synonyms":[{"name":"(2S,3R)-2-amino-3-(5-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"3-(3'-L-histidyl)-L-tyrosine","type":"exact"},{"name":"3-(N3'-histidyl)tyrosine","type":"exact"},{"name":"3-(pi-histidyl)tyrosine","type":"exact"},{"name":"3-(pros-histidyl)tyrosine","type":"exact"},{"name":"CROSSLNK 3'-histidyl-3-tyrosine (His-Tyr)","type":"exact"},{"name":"beta-(N(delta)-histidyl)tyrosine","type":"exact"},{"name":"beta-(N3'-histidyl)tyrosine","type":"exact"}],"termid":"MOD:00255"}


id: GO:0039524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts mRNA processing in its host. mRNA processing is the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:sp","VZ:903","GOC:bf","PMID:16571812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host gene expression","termid":"GO:0039657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA processing","synonyms":[{"name":"inhibition by virus of host mRNA processing","type":"narrow"},{"name":"inhibition of host mRNA processing","type":"exact"},{"name":"inhibition of host pre-mRNA processing by virus","type":"narrow"},{"name":"negative regulation of host mRNA processing","type":"broad"},{"name":"suppression by virus of host mRNA processing","type":"narrow"}],"termid":"GO:0039524"}


id: PBO:0048874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A5 pseudogene 1","termid":"PBO:0048874"}


id: PBO:0089815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome passenger complex subunit, INCENP ortholog Pic1","termid":"PBO:0089815"}


id: FYPO:0002137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of an RNA catabolic process is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"},{"relation_name":"is_a","term_name":"decreased RNA catabolic process","termid":"FYPO:0003552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA catabolic process during vegetative growth","synonyms":[{"name":"decreased RNA breakdown during vegetative growth","type":"exact"},{"name":"decreased RNA catabolic process during mitotic cell cycle","type":"related"},{"name":"decreased RNA catabolism during vegetative growth","type":"exact"},{"name":"decreased RNA degradation during vegetative growth","type":"exact"},{"name":"reduced RNA catabolic process during vegetative growth","type":"exact"}],"termid":"FYPO:0002137"}


id: PBO:0028650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rRNA_precursor_level","termid":"PBO:0028650"}


id: PBO:0078781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 6-1","termid":"PBO:0078781"}


id: GO:0044872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a lipoprotein is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lipoprotein localization","termid":"GO:0044872"}


id: GO:0044634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the alternative pathway, in a different organism.","definition_xrefs":["PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of complement activation, alternative pathway in another organism (obsolete GO:0044634)","synonyms":[{"name":"negative regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044634"}


id: _global:overlaps
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"X overlaps Y iff there exists some Z such that Z contained_by X and Z contained_by Y.","definition_xrefs":["PMID:20226267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"_global:mereotopologically_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlaps","secondary_identifiers":["RO:0002131"],"termid":"_global:overlaps"}


id: GO:0072260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric interstitial fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast fate commitment","termid":"GO:0072153"},{"relation_name":"part_of","term_name":"metanephric interstitial fibroblast differentiation","termid":"GO:0072258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast fate commitment","synonyms":[{"name":"metanephros interstitial cell fate commitment","type":"exact"}],"termid":"GO:0072260"}


id: PBO:0058084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4301","termid":"PBO:0058084"}


id: PBO:0071894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 32","termid":"PBO:0071894"}


id: PBO:0042537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 6","termid":"PBO:0042537"}


id: FYPO:0008182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding by a gene product to the Spt5 CTD domain is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased Spt5-CTD binding","termid":"FYPO:0008182"}


id: PBO:0055507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2941","termid":"PBO:0055507"}


id: GO:1990672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a medial-Golgi-derived vesicle to the lipid bilayer membrane around the Golgi trans cisterna. Vesicles are involved in anterograde transport.","definition_xrefs":["GOC:bhm","PMID:24119662","PMID:16038056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"inter-Golgi cisterna vesicle-mediated transport","termid":"GO:0048219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"medial-Golgi-derived vesicle fusion with Golgi trans cisterna membrane","termid":"GO:1990672"}


id: GO:0070816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group on to an amino acid residue in the C-terminal domain of RNA polymerase II. Typically, this occurs during the transcription cycle and results in production of an RNA polymerase II enzyme where the carboxy-terminal domain (CTD) of the largest subunit is extensively phosphorylated, often referred to as hyperphosphorylated or the II(0) form. Specific types of phosphorylation within the CTD are usually associated with specific regions of genes, though there are exceptions. The phosphorylation state regulates the association of specific complexes such as the capping enzyme or 3'-RNA processing machinery to the elongating RNA polymerase complex.","definition_xrefs":["GOC:mah","GOC:krc","PMID:17079683"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:0070816)","synonyms":[{"name":"CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:0070816"}


id: GO:0045840
data:
  {"annotated_genes":["SJAG_00883","SJAG_02380","SJAG_04259","SJAG_03353","SJAG_02169","SJAG_01679","SJAG_02451","SJAG_01805","SJAG_04573","SJAG_04968","SJAG_01297","SJAG_03126","SJAG_02498","SJAG_02336","SJAG_03681","SJAG_00666","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100013,109895,110376,108069,104361,112004,103339,95706,86870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[96255,110377,107481,89932,98228,98502,93831,110875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic nuclear division","termid":"GO:0007088"},{"relation_name":"is_a","term_name":"positive regulation of nuclear division","termid":"GO:0051785"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitosis","type":"narrow"},{"name":"mitogenic activity","type":"narrow"},{"name":"positive regulation of mitosis","type":"exact"},{"name":"stimulation of mitosis","type":"narrow"},{"name":"up regulation of mitosis","type":"exact"},{"name":"up-regulation of mitosis","type":"exact"},{"name":"upregulation of mitosis","type":"exact"}],"termid":"GO:0045840","terms_by_termid":{"GO:0045842":null,"GO:0140499":null,"GO:1902426":null}}


id: PR:O74959
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinol dehydrogenase 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C736.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.13","secondary_identifiers":["UniProtKB:O74959"],"synonyms":[{"name":"Spom972h-RDH13","type":"exact"}],"termid":"PR:O74959"}


id: PBO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds UAS 5'-CCAGCC-3'","termid":"PBO:0001963"}


id: PBO:0074580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 1","termid":"PBO:0074580"}


id: PBO:0089691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly protein Nas2","termid":"PBO:0089691"}


id: PBO:0091131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H Rnh1","termid":"PBO:0091131"}


id: FYPO:0003529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that enters the cell cycle and undergoes two or more rounds of cell division, but then becomes elongated and undergoes cell cycle arrest in interphase of the mitotic cell cycle, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, cell cycle arrest in mitotic interphase, elongated cells","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated aseptate cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated cell arrested at interphase","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, cell cycle arrest in mitotic interphase, elongated cells","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, cell cycle arrest in mitotic interphase, elongated cells","type":"exact"}],"termid":"FYPO:0003529"}


id: PBO:0004093
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.6.2.4","termid":"PBO:0004093"}


id: SO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"RNA secondary structure that affects the stability of an RNA molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001957 RNA_stability_element (obsolete SO:0001957)","synonyms":[{"name":"rna stability element","type":"related"}],"termid":"SO:0001957"}


id: PBO:0077874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase pseudogene 1","termid":"PBO:0077874"}


id: PR:Q9UST7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfc3 gene.","definition_xrefs":["UniProtKB:Q9UST7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.07","synonyms":[{"name":"Spom972h-sfc3","type":"exact"},{"name":"TFIIIC subunit sfc3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UST7"}


id: GO:0044000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism or its progeny spreads from one location to another within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete movement in host (obsolete GO:0044000)","synonyms":[{"name":"movement in host environment","type":"related"},{"name":"movement of symbiont in host","type":"exact"},{"name":"movement of symbiont within host","type":"exact"},{"name":"movement within host","type":"exact"},{"name":"symbiont movement in host","type":"exact"},{"name":"symbiont movement within host","type":"related"}],"termid":"GO:0044000"}


id: GO:2000135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of regulation of secondary heart field cardioblast proliferation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of regulation of secondary heart field cardioblast proliferation (obsolete GO:2000135)","synonyms":[{"name":"positive regulation of regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"positive regulation of regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:2000135"}


id: GO:0021820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the deposition of extracellular matrix signals in the marginal zone of the developing cerebral cortex. This extracellular matrix controls the movement of migrating cells. In mammals, the matrix is modified by Cajal-Retzius cells.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","PMID:12626695","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"},{"relation_name":"part_of","term_name":"layer formation in cerebral cortex","termid":"GO:0021819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extracellular matrix organization in marginal zone involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"extracellular matrix organisation in marginal zone involved in cerebral cortex radial glia guided migration","type":"exact"},{"name":"organization of extracellular matrix in the marginal zone involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021820"}


id: GO:0075502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Induction of endosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus through the endosomal pathway, and results in delivery of the virus contents into the host cell cytoplasm.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeabilization of host organelle membrane involved in viral entry into host cell","termid":"GO:0039665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome membrane permeabilization involved in viral entry into host cell","secondary_identifiers":["GO:0075518"],"synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by endosome membrane","type":"related"},{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by endosome membrane permeabilization","type":"related"}],"termid":"GO:0075502"}


id: PBO:0002679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease Rex3 (predicted)","termid":"PBO:0002679"}


id: PBO:0051395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 3","termid":"PBO:0051395"}


id: PBO:0030087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuolated","termid":"PBO:0030087"}


id: PBO:0073742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC2A1 divergent transcript","termid":"PBO:0073742"}


id: PBO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic RNA (predicted), possible alternative UTR","termid":"PBO:0000209"}


id: PBO:0074152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E1 pseudogene 1","termid":"PBO:0074152"}


id: PBO:0086030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; YLL033W is not an essential gene but mutant is defective in spore formation; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0086030"}


id: PBO:0034261
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-positively_regulated_by","termid":"PBO:0034261"}


id: GO:0036505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prosaposin to initiate a change in cell activity. Prosaposin is the glycoprotein precursor of four cleavage products (saposins A, B, C and D).","definition_xrefs":["GOC:bf","GOC:PARL","PMID:23690594","PMID:9388493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prosaposin receptor activity","synonyms":[{"name":"prosaposin-activated receptor activity","type":"exact"}],"termid":"GO:0036505"}


id: GO:0051108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-carnitine + CoA + ATP = AMP + diphosphate + D-carnitinyl-CoA.","definition_xrefs":["MetaCyc:DCARNCOALIG-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"carnitine-CoA ligase activity","secondary_identifiers":["RHEA:30543"],"synonyms":[{"name":"carnitine synthetase activity","type":"exact"},{"name":"crotonobetaine/carnitine-CoA ligase activity","type":"broad"}],"termid":"GO:0051108"}


id: PBO:0066877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 177","termid":"PBO:0066877"}


id: PBO:0077780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tonsoku like, DNA repair protein","termid":"PBO:0077780"}


id: PBO:0052541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 14","termid":"PBO:0052541"}


id: PBO:0085661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in negative regulation of iron regulon transcription; forms an iron independent complex with Fra2p, Grx3p, and Grx4p; cytosolic; mutant fails to repress transcription of iron regulon and is defective in spore formation","termid":"PBO:0085661"}


id: PBO:0026870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_methylation_at_mating_type_locus","termid":"PBO:0026870"}


id: MOD:00139
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N2-succinyl-L-tryptophan.","definition_xrefs":["PubMed:12175151","PubMed:11857757","PubMed:8471040","RESID:AA0130","Unimod:64#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N2-succinyl-L-tryptophan","synonyms":[{"name":"(2S)-2-(3-carboxypropanoyl)amino-3-(1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"(2S)-2-amino-(6,7-dihydro-6,7-dioxo-1H-indole)-3-propanoic acid","type":"exact"},{"name":"MOD_RES N2-succinyltryptophan","type":"exact"},{"name":"N2-succinyl-L-tryptophan","type":"exact"},{"name":"Succinic anhydride labeling reagent light form (N-term)","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:00139"}


id: GO:0055109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infolding of the epithelial sheet into the embryo involved in deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invagination involved in gastrulation with mouth forming second","termid":"GO:0055109"}


id: PBO:0061329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B7","termid":"PBO:0061329"}


id: SO:1000081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that alters the rate a which transcription of the sequence occurs.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000081 sequence_variant_affecting_rate_of_transcription (obsolete SO:1000081)","synonyms":[{"name":"mutation affecting rate of transcription","type":"related"},{"name":"sequence variant affecting rate of transcription","type":"exact"}],"termid":"SO:1000081"}


id: GO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process contributing to anergy, a state of functional inactivation that occurs as part of tolerance induction, in B cells in the bone marrow.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell anergy","termid":"GO:0002515"},{"relation_name":"part_of","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"part_of","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell anergy","synonyms":[{"name":"central B lymphocyte anergy","type":"exact"},{"name":"central B-cell anergy","type":"exact"},{"name":"central B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002341"}


id: PBO:0051919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 3","termid":"PBO:0051919"}


id: PBO:0075194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 6","termid":"PBO:0075194"}


id: GO:0055068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of cobalt ions within an organism or cell.","definition_xrefs":["GOC:ai","GOC:mah","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete cobalt ion homeostasis (obsolete GO:0055068)","synonyms":[{"name":"cobalt homeostasis","type":"broad"}],"termid":"GO:0055068"}


id: PBO:0087414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (60 kDa) of TFIID and SAGA complexes; involved in transcription initiation of RNA polymerase II and in chromatin modification, similar to histone H4; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087414"}


id: GO:0075273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of zygosporangium development","termid":"GO:0075272"},{"relation_name":"positively_regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zygosporangium development","termid":"GO:0075273"}


id: PBO:0039499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 22","termid":"PBO:0039499"}


id: PBO:0075389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp3 transcription factor","termid":"PBO:0075389"}


id: GO:0015661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-lysine from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"},{"relation_name":"is_a","term_name":"L-amino acid efflux transmembrane transporter activity","termid":"GO:0034639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-lysine efflux transmembrane transporter activity","synonyms":[{"name":"L-lysine exporter activity","type":"exact"},{"name":"L-lysine, 2,6-diaminohexanoic acid efflux transmembrane transporter activity","type":"exact"}],"termid":"GO:0015661"}


id: PBO:0069961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1255, pseudogene","termid":"PBO:0069961"}


id: GO:0032013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ARF protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ARF protein signal transduction","termid":"GO:0032012"},{"relation_name":"is_a","term_name":"negative regulation of small GTPase mediated signal transduction","termid":"GO:0051058"},{"relation_name":"negatively_regulates","term_name":"ARF protein signal transduction","termid":"GO:0032011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ARF protein signal transduction","synonyms":[{"name":"down regulation of ARF protein signal transduction","type":"exact"},{"name":"down-regulation of ARF protein signal transduction","type":"exact"},{"name":"downregulation of ARF protein signal transduction","type":"exact"},{"name":"inhibition of ARF protein signal transduction","type":"narrow"}],"termid":"GO:0032013"}


id: GO:0072062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the S1 cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"proximal convoluted tubule segment 1 development","termid":"GO:0072031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal convoluted tubule segment 1 cell differentiation","synonyms":[{"name":"S1 cell differentiation","type":"exact"}],"termid":"GO:0072062"}


id: GO:0031640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell killing","termid":"GO:0001906"},{"relation_name":"is_a","term_name":"disruption of cell in another organism","termid":"GO:0141061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"killing of cells of another organism","secondary_identifiers":["GO:0001908"],"synonyms":[{"name":"killing of cells of other organism","type":"exact"}],"termid":"GO:0031640"}


id: GO:0043484
data:
  {"annotated_genes":["SJAG_01040","SJAG_01799","SJAG_04782","SJAG_00996","SJAG_00249","SJAG_01919","SJAG_02018","SJAG_01511","SJAG_02058"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[74390,107033,88285,72988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[91509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000381"},{"annotations":[94698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905744"},{"annotations":[89869,114789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of RNA splicing, the process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00249":null,"SJAG_00996":null,"SJAG_01040":null,"SJAG_01511":null,"SJAG_01799":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_04782":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of RNA splicing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043484","terms_by_termid":{"GO:0000381":null,"GO:0048024":null,"GO:0048026":null,"GO:1905744":null,"GO:1905746":null}}


id: GO:0102307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + erythromycin C = S-adenosyl-L-homocysteine + erythromycin A + H+.","definition_xrefs":["EC:2.1.1.254","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"erythromycin C 3''-o-methyltransferase activity","secondary_identifiers":["RHEA:32647","MetaCyc:RXN-12923"],"termid":"GO:0102307"}


id: PBO:0088145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088145"}


id: PBO:0039984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 5C","termid":"PBO:0039984"}


id: PBO:0002538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAP family protein (predicted)","termid":"PBO:0002538"}


id: GO:0044151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism occurring on or near the exterior of its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete growth of host on or near symbiont surface (obsolete GO:0044151)","synonyms":[{"name":"growth of organism on or near symbiont surface","type":"exact"}],"termid":"GO:0044151"}


id: PBO:0003822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BolA domain UV induced protein Uvi31","termid":"PBO:0003822"}


id: PBO:0043741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2","termid":"PBO:0043741"}


id: GO:0033218
data:
  {"annotated_genes":["SJAG_01246","SJAG_01714","SJAG_01458","SJAG_00869","SJAG_04352","SJAG_04031","SJAG_03238","SJAG_02413","SJAG_03690","SJAG_01351","SJAG_05181"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097001"},{"annotations":[76829,103749,88108,100779,109769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016018"},{"annotations":[93153,95395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043295"},{"annotations":[99595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"},{"annotations":[97319,90236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031177"}]},"cv_name":"molecular_function","definition":"Binding to an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00869":null,"SJAG_01246":null,"SJAG_01351":null,"SJAG_01458":null,"SJAG_01714":null,"SJAG_02413":null,"SJAG_03238":null,"SJAG_03690":null,"SJAG_04031":null,"SJAG_04352":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"amide binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033218","terms_by_termid":{"GO:0016018":null,"GO:0031177":null,"GO:0036042":null,"GO:0043295":null,"GO:0097001":null}}


id: PBO:0050331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 33","termid":"PBO:0050331"}


id: GO:0044640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant negative regulation of complement activation via the lectin pathway in the bitten/stung organism.","definition_xrefs":["PMID:20837040","GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in negative regulation of complement activation, lectin pathway in another organism (obsolete GO:0044640)","synonyms":[{"name":"envenomation resulting in negative regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044640"}


id: GO:1904045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aldosterone stimulus.","definition_xrefs":["PMID:17644563","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to mineralocorticoid stimulus","termid":"GO:0071389"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to aldosterone","termid":"GO:1904044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to aldosterone","termid":"GO:1904045"}


id: GO:0021717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the inferior olivary nucleus to attain its fully functional state. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","ISBN:0838580343","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"medulla oblongata maturation","termid":"GO:0021582"},{"relation_name":"part_of","term_name":"inferior olivary nucleus development","termid":"GO:0021713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus maturation","synonyms":[{"name":"inferior olive maturation","type":"related"}],"termid":"GO:0021717"}


id: GO:0003824
data:
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