# terms

id: FYECO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which myristic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ myristic acid","termid":"FYECO:0000044"}


id: PBO:0035913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_medial_membrane_band_assembly","termid":"PBO:0035913"}


id: FYPO:0004912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in the vacuole is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytochelatin absent from cell","termid":"FYPO:0002722"},{"relation_name":"is_a","term_name":"decreased vacuolar phytochelatin level","termid":"FYPO:0004369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"phytochelatin absent from vacuole","synonyms":[{"name":"cadystin absent from vacuole","type":"exact"},{"name":"phytochelatin absent from vacuole during mitotic cell cycle","type":"related"},{"name":"phytochelatin absent from vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0004912"}


id: PBO:0062737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 4","termid":"PBO:0062737"}


id: FYPO:0008151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal in the pericentromeres. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:21211723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in heterochromatin","termid":"FYPO:0000855"},{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleosome occupancy at centromeric heterochromatin","synonyms":[{"name":"decreased nucleosome occupancy at centromeric region","type":"related"}],"termid":"FYPO:0008151"}


id: FYECO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that describes a defined growth medium, i.e. one in which all constituent substances and their concentrations are known.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping defined medium","termid":"FYECO:0000013"}


id: GO:0016176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme superoxide-generating NADPH oxidase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"superoxide-generating NADPH oxidase activator activity","synonyms":[{"name":"neutrophil cytosol factor 2","type":"narrow"}],"termid":"GO:0016176"}


id: PBO:0086106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of succinate dehydrogenase; interacts with flavinylated Sdh1p and may function as a chaperone for free Sdh1p, protecting its FAD cofactor from redox reactions before assembly of the complex; soluble protein of the mitochondrial matrix; respiratory defect of null mutant is functionally complemented by Drosophila and human orthologs","termid":"PBO:0086106"}


id: PBO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial heat shock protein Hsp60/Mcp60","termid":"PBO:0000300"}


id: PBO:0063351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNX4 divergent transcript","termid":"PBO:0063351"}


id: PBO:0056458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS1 proto-oncogene, G protein-coupled receptor","termid":"PBO:0056458"}


id: GO:0034356
data:
  {"annotated_genes":["SJAG_04693","SJAG_01359","SJAG_01500","SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86800,87210,95462,109205],"is_not":false,"summary":null,"term":"GO:0034356"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD) from the vitamin precursor nicotinamide riboside.","definition_xrefs":["PMID:17482543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD biosynthetic process","termid":"GO:0009435"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"NAD biosynthesis via nicotinamide riboside salvage pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NR salvage pathway","type":"exact"},{"name":"nicotinamide riboside salvage pathway","type":"exact"}],"termid":"GO:0034356","terms_by_termid":{"GO:0034356":null}}


id: GO:0048024
data:
  {"annotated_genes":["SJAG_01799","SJAG_02058","SJAG_01040","SJAG_01919","SJAG_00996","SJAG_02018","SJAG_00249","SJAG_04782","SJAG_01511"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89869,114789],"is_not":false,"summary":null,"term":"GO:0048024"},{"annotations":[114487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[74390,88285,72988,107033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[91509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000381"},{"annotations":[94698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905744"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA splicing via a spliceosomal mechanism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA splicing","termid":"GO:0043484"},{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"regulates","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00249":null,"SJAG_00996":null,"SJAG_01040":null,"SJAG_01511":null,"SJAG_01799":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_04782":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0035055"],"synonyms":[{"name":"regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"regulation of pre-mRNA splicing","type":"broad"}],"termid":"GO:0048024","terms_by_termid":{"GO:0000381":null,"GO:0048024":null,"GO:0048026":null,"GO:1905744":null,"GO:1905746":null}}


id: PBO:0004662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase epsilon subunit (predicted)","termid":"PBO:0004662"}


id: GO:1902322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methyl-branched fatty acid biosynthetic process.","definition_xrefs":["GOC:kmv","PMID:15340492","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"regulates","term_name":"methyl-branched fatty acid biosynthetic process","termid":"GO:1902321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"regulation of methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902322"}


id: GO:0014010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell proliferation","termid":"GO:0014010"}


id: GO:0060285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility due to the motion of one or more eukaryotic cilia. A eukaryotic cilium is a specialized organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:mlg","GOC:mtg_cambridge_2013","GOC:dph","GOC:cilia","GOC:krc","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium or flagellum-dependent cell motility","termid":"GO:0001539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium-dependent cell motility","secondary_identifiers":["GO:0071974"],"synonyms":[{"name":"ciliary cell motility","type":"related"},{"name":"cilium cell motility","type":"exact"},{"name":"microtubule-based flagellar cell motility","type":"exact"}],"termid":"GO:0060285"}


id: PBO:0111757
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide 3-kinase family protein","termid":"PBO:0111757"}


id: GO:0046189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol-containing compound biosynthetic process","synonyms":[{"name":"phenol-containing compound anabolism","type":"exact"},{"name":"phenol-containing compound biosynthesis","type":"exact"},{"name":"phenol-containing compound formation","type":"exact"},{"name":"phenol-containing compound synthesis","type":"exact"}],"termid":"GO:0046189"}


id: PBO:0050103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 13","termid":"PBO:0050103"}


id: PBO:0050568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H4","termid":"PBO:0050568"}


id: PR:Q9UTK0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein NOB1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01341","PANTHER:PTHR12814:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S-pre-rRNA D-site endonuclease nob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.09","secondary_identifiers":["UniProtKB:Q9UTK0"],"synonyms":[{"name":"Spom972h-NOB1","type":"exact"},{"name":"pre-rRNA-processing endonuclease nob1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTK0"}


id: PBO:0044109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 66","termid":"PBO:0044109"}


id: GO:0002619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of non-professional antigen presenting cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002619"}


id: PBO:0028421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_coenzyme_Q10_level","termid":"PBO:0028421"}


id: PBO:0002942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidophosphoribosyltransferase Ade4","termid":"PBO:0002942"}


id: MOD:00058
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine to N-acetyl-L-methionine.","definition_xrefs":["RESID:AA0049","PubMed:7944406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-methionine","synonyms":[{"name":"(2S)-2-acetamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-acetylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-acetylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-acetylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"AcMet","type":"exact"},{"name":"MOD_RES N-acetylmethionine","type":"exact"},{"name":"N-acetyl-L-methionine","type":"exact"},{"name":"N-acetylated L-methionine","type":"exact"},{"name":"acetylmethionine","type":"exact"},{"name":"methionamine","type":"exact"}],"termid":"MOD:00058"}


id: GO:0071392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to estradiol","termid":"GO:0032355"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to estradiol stimulus","synonyms":[{"name":"cellular response to E2 stimulus","type":"exact"}],"termid":"GO:0071392"}


id: GO:0006700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C21-steroid hormone metabolic process","termid":"GO:0008207"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"C21-steroid hormone biosynthetic process","synonyms":[{"name":"C21-steroid hormone anabolism","type":"exact"},{"name":"C21-steroid hormone biosynthesis","type":"exact"},{"name":"C21-steroid hormone formation","type":"exact"},{"name":"C21-steroid hormone synthesis","type":"exact"}],"termid":"GO:0006700"}


id: PBO:0035898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_anaerobic_cell_population_growth","termid":"PBO:0035898"}


id: PBO:0078509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 3","termid":"PBO:0078509"}


id: PBO:0060347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVB","termid":"PBO:0060347"}


id: PBO:0046932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM47E-STBD1 readthrough","termid":"PBO:0046932"}


id: PATO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's dependence on oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity to oxygen","termid":"PATO:0001454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aerobic","termid":"PATO:0001455"}


id: PBO:0064163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVA","termid":"PBO:0064163"}


id: PBO:0085231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS domain-containing serine/threonine protein kinase; coordinately regulates protein synthesis and carbohydrate metabolism and storage in response to a unknown metabolite that reflects nutritional status; PSK1 has a paralog, PSK2, that arose from the whole genome duplication","termid":"PBO:0085231"}


id: GO:0070377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK5 cascade.","definition_xrefs":["ISBN:0121245462","ISBN:0896039986","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of ERK5 cascade","termid":"GO:0070376"},{"relation_name":"negatively_regulates","term_name":"ERK5 cascade","termid":"GO:0070375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERK5 cascade","synonyms":[{"name":"down regulation of BMK cascade","type":"exact"},{"name":"down-regulation of BMK cascade","type":"exact"},{"name":"downregulation of BMK cascade","type":"exact"},{"name":"inhibition of BMK cascade","type":"narrow"},{"name":"negative regulation of BMK cascade","type":"exact"},{"name":"negative regulation of BMK signaling pathway","type":"exact"},{"name":"negative regulation of BMK signalling pathway","type":"exact"},{"name":"negative regulation of BMK1 cascade","type":"exact"},{"name":"negative regulation of ERK5 signaling pathway","type":"exact"},{"name":"negative regulation of MAPK7 cascade","type":"exact"}],"termid":"GO:0070377"}


id: GO:1905426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie","PMID:17244647"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt-mediated midbrain dopaminergic neuron differentiation (obsolete GO:1905426)","synonyms":[{"name":"activation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wg signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wg signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"activation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"activation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"activation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"activation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"activation of Wnt-mediated midbrain DA neuron differentiation","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"positive regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"positive regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of midbrain dopaminergic neuron differentiation by positive regulation of Wnt signaling","type":"related"},{"name":"up regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"up regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"up regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"up regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"up regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"up regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"up-regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"up-regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"up-regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"up-regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"up-regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"upregulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"upregulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"upregulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"upregulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"upregulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1905426"}


id: GO:0071224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptidoglycan","termid":"GO:0032494"},{"relation_name":"is_a","term_name":"cellular response to molecule of bacterial origin","termid":"GO:0071219"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to peptidoglycan","termid":"GO:0071224"}


id: PBO:0047247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 238 member A","termid":"PBO:0047247"}


id: GO:0035048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a pre-mRNA splicing factor from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete splicing factor protein import into nucleus (obsolete GO:0035048)","synonyms":[{"name":"splicing factor protein transport from cytoplasm to nucleus","type":"exact"},{"name":"splicing factor protein-nucleus import","type":"exact"}],"termid":"GO:0035048"}


id: PBO:0066084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginyl-tRNA synthetase 1","termid":"PBO:0066084"}


id: PBO:0050323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 25","termid":"PBO:0050323"}


id: PBO:0110988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, DUF34 family, possible chaperone or insertase (PMID: 34572495)","termid":"PBO:0110988"}


id: PBO:0067688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 5","termid":"PBO:0067688"}


id: PBO:0047571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 22","termid":"PBO:0047571"}


id: PBO:0034567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_during_meiotic_cell_cycle","termid":"PBO:0034567"}


id: PBO:0065338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteinase 3","termid":"PBO:0065338"}


id: GO:0009171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate biosynthetic process","termid":"GO:0009127"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009157"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate biosynthetic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate anabolism","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate formation","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009171"}


id: PBO:0000875
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplicated in S. pombe","termid":"PBO:0000875"}


id: PBO:0089681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit Rpp21","termid":"PBO:0089681"}


id: GO:0051042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of calcium-independent cell-cell adhesion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of calcium-independent cell-cell adhesion","termid":"GO:0051040"},{"relation_name":"negatively_regulates","term_name":"calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules","termid":"GO:0016338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of calcium-independent cell-cell adhesion","synonyms":[{"name":"down regulation of calcium-independent cell-cell adhesion","type":"exact"},{"name":"down-regulation of calcium-independent cell-cell adhesion","type":"exact"},{"name":"downregulation of calcium-independent cell-cell adhesion","type":"exact"},{"name":"inhibition of calcium-independent cell-cell adhesion","type":"narrow"}],"termid":"GO:0051042"}


id: GO:0034929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-hydroxypyrene + O2 + 2 H+ + 2 e- = 1-hydroxypyrene-7,8-oxide + H2O.","definition_xrefs":["UM-BBD_reactionID:r0949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-hydroxypyrene 7,8-monooxygenase activity","termid":"GO:0034929"}


id: GO:0016123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"xanthophyll biosynthetic process","synonyms":[{"name":"xanthophyll anabolism","type":"exact"},{"name":"xanthophyll biosynthesis","type":"exact"},{"name":"xanthophyll formation","type":"exact"},{"name":"xanthophyll synthesis","type":"exact"}],"termid":"GO:0016123"}


id: PBO:0069997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1292, pseudogene","termid":"PBO:0069997"}


id: PBO:0036244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex ubiquitin-protein ligase E3 subunit Mot2","termid":"PBO:0036244"}


id: GO:0008907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the integration of one DNA segment into another.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"integrase activity","secondary_identifiers":["Reactome:R-HSA-164523"],"termid":"GO:0008907"}


id: GO:0080175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in phragmoplast, a plant cell specific structure that forms during late cytokinesis. Phragmoplast serves as a scaffold for cell plate assembly and subsequent formation of a new cell wall separating the two daughter cells.","definition_xrefs":["PMID:19383896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"phragmoplast microtubule organization","synonyms":[{"name":"phragmoplast microtubule cytoskeleton organization","type":"exact"},{"name":"phragmoplast microtubule organisation","type":"exact"}],"termid":"GO:0080175"}


id: GO:0032097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains, or increases the rate of a response to a food stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to food","termid":"GO:0032095"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"positively_regulates","term_name":"response to food","termid":"GO:0032094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to food","synonyms":[{"name":"activation of response to food","type":"narrow"},{"name":"stimulation of response to food","type":"narrow"},{"name":"up regulation of response to food","type":"exact"},{"name":"up-regulation of response to food","type":"exact"},{"name":"upregulation of response to food","type":"exact"}],"termid":"GO:0032097"}


id: PBO:0060740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 5","termid":"PBO:0060740"}


id: GO:0035593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the Wnt signaling pathway by the directed movement of a Wnt protein within the extracellular region.","definition_xrefs":["GOC:BHF","PMID:19906850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of Wnt signaling pathway","termid":"GO:0030177"},{"relation_name":"is_a","term_name":"establishment of protein localization to extracellular region","termid":"GO:0035592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Wnt signaling pathway by establishment of Wnt protein localization to extracellular region","synonyms":[{"name":"positive regulation of Wnt diffusion","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway by establishment of Wnt protein localisation in extracellular region","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway by establishment of Wnt protein localization in extracellular region","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway by establishment of Wnt protein localization to extracellular region","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway by establishment of Wnt protein localization in extracellular region","type":"exact"},{"name":"positive regulation of Wnt signaling range","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway by establishment of Wnt protein localization to extracellular region","type":"exact"}],"termid":"GO:0035593"}


id: PBO:0048510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 11","termid":"PBO:0048510"}


id: GO:0102960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta-hydroxy-9beta-pimara-7,15-diene-19,6beta-olide + NAD(P) = momilactone A + H+ + NAD(P)H.","definition_xrefs":["GOC:pz","RHEA:25367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"momilactone-A synthase activity","secondary_identifiers":["EC:1.1.1.295","MetaCyc:RXN-9290"],"termid":"GO:0102960"}


id: PBO:0061056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipsnap homolog 3B","termid":"PBO:0061056"}


id: GO:1904898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:15358192","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast proliferation","termid":"GO:0048147"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell proliferation","termid":"GO:1904897"},{"relation_name":"negatively_regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatic stellate cell proliferation","synonyms":[{"name":"down regulation of Ito cell proliferation","type":"exact"},{"name":"down regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"down regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"down regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"down-regulation of Ito cell proliferation","type":"exact"},{"name":"down-regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"down-regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"down-regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"downregulation of Ito cell proliferation","type":"exact"},{"name":"downregulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"downregulation of hepatic stellate cell proliferation","type":"exact"},{"name":"downregulation of perisinusoidal cell proliferation","type":"exact"},{"name":"inhibition of Ito cell proliferation","type":"narrow"},{"name":"inhibition of hepatic perisinusoidal cell proliferation","type":"narrow"},{"name":"inhibition of hepatic stellate cell proliferation","type":"narrow"},{"name":"inhibition of perisinusoidal cell proliferation","type":"narrow"},{"name":"negative regulation of Ito cell proliferation","type":"exact"},{"name":"negative regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"negative regulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904898"}


id: PBO:0070917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 25","termid":"PBO:0070917"}


id: PBO:0086065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that interacts with Msb2p; may play a role in activation of the filamentous growth pathway","termid":"PBO:0086065"}


id: PBO:0073601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shroom family member 2","termid":"PBO:0073601"}


id: PBO:0045681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 1","termid":"PBO:0045681"}


id: GO:0045264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All non-F1 subunits of the plasma membrane hydrogen-transporting ATP synthase, including integral and peripheral plasma membrane proteins.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex, coupling factor F(o)","termid":"GO:0045263"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane proton-transporting ATP synthase complex","termid":"GO:0045260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"plasma membrane proton-transporting ATP synthase complex, coupling factor F(o)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F0 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, coupling factor F(0)","type":"broad"},{"name":"proton-transporting ATP synthase complex, coupling factor F(o)","type":"broad"}],"termid":"GO:0045264"}


id: PATO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Absence of a tissue or organ due to failure to develop.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absent","termid":"PATO:0000462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis","termid":"PATO:0002291"}


id: PBO:0077545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 255B","termid":"PBO:0077545"}


id: GO:0044679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which catalyzes the conversion of methanophenazine and hydrogen to form dihydromethanophenazine. This typically consists of three polypeptides.","definition_xrefs":["GOC:mengo_curators","PMID:9555882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methanophenazine reducing hydrogenase complex","termid":"GO:0044679"}


id: GO:1990065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in the MEP pathway of IPP biosynthesis. It catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).","definition_xrefs":["GOC:bhm","PMID:15339150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Dxr protein complex","synonyms":[{"name":"1-deoxy-D-xylulose 5-phosphate reductoisomerase complex","type":"exact"}],"termid":"GO:1990065"}


id: GO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["GOC:rn","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acid chemical","synonyms":[{"name":"response to acid","type":"broad"},{"name":"response to acid anion","type":"related"},{"name":"response to oxoanion","type":"related"}],"termid":"GO:0001101"}


id: GO:0010816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the peptide calcitonin.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"calcitonin catabolic process","termid":"GO:0010816"}


id: PBO:0048335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 46","termid":"PBO:0048335"}


id: MOD:00724
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom on a nitrogen of an L-histidine residue with one methyl group.","definition_xrefs":["OMSSA:74","Unimod:34#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated histidine","termid":"MOD:00661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated L-histidine","synonyms":[{"name":"Methyl","type":"related"},{"name":"NMeHis","type":"exact"},{"name":"methylh","type":"exact"}],"termid":"MOD:00724"}


id: FYPO:0005582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains monoacylglycerol phosphates (also called lysophospholipids) that have normal length fatty acid chain residues.","definition_xrefs":["PMID:27053105","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal monoacylglycerol phosphate chain length","synonyms":[{"name":"normal lysophospholipid chain length","type":"exact"},{"name":"normal lysophospholipid fatty acid chain length","type":"exact"},{"name":"normal monoacylglycerol phosphate chain length during mitotic cell cycle","type":"related"},{"name":"normal monoacylglycerol phosphate chain length during vegetative growth","type":"exact"},{"name":"normal monoacylglycerol phosphate fatty acid chain length","type":"exact"}],"termid":"FYPO:0005582"}


id: PBO:0071183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 24","termid":"PBO:0071183"}


id: GO:0035755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of cardiolipin (1,3-bis(3-phosphatidyl)glycerol), releasing phosphatidic acid (PA).","definition_xrefs":["PMID:17028579","PMID:21397848","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"cardiolipin hydrolase activity","secondary_identifiers":["Reactome:R-HSA-8954398"],"termid":"GO:0035755"}


id: PR:O13614
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1002 gene.","definition_xrefs":["UniProtKB:O13614","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S10-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.08","synonyms":[{"name":"Spom972h-rps1002","type":"exact"}],"termid":"PR:O13614"}


id: PBO:0075948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 3 (pseudogene)","termid":"PBO:0075948"}


id: GO:0061271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the mesonephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition involved in renal vesicle formation","termid":"GO:0072036"},{"relation_name":"part_of","term_name":"mesonephric renal vesicle formation","termid":"GO:0061262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in mesonephric renal vesicle formation","termid":"GO:0061271"}


id: PBO:0039539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 36C","termid":"PBO:0039539"}


id: GO:0051679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["PubChem_Compound:439991","LIGAND:C03367","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"6-alpha-maltosylglucose metabolic process","synonyms":[{"name":"6-alpha-maltosylglucose metabolism","type":"exact"},{"name":"isopanose metabolic process","type":"exact"},{"name":"isopanose metabolism","type":"exact"}],"termid":"GO:0051679"}


id: FYPO:0003390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the medial cortex is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to medial cortex during vegetative growth","synonyms":[{"name":"ectopic protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalised to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to medial cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003390"}


id: PBO:0085315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylglycerol phospholipase C; regulates phosphatidylglycerol (PG) accumulation via a phospholipase C-type degradation mechanism; PG levels affect mitochondrial function; contains glycerophosphodiester phosphodiesterase motifs","termid":"PBO:0085315"}


id: PR:Q9Y823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2-isopropylmalate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocitrate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.02c","secondary_identifiers":["UniProtKB:Q9Y823"],"synonyms":[{"name":"Spom972h-leuA","type":"exact"}],"termid":"PR:Q9Y823"}


id: PBO:0048682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 1","termid":"PBO:0048682"}


id: GO:0051080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the nuclear membranes during the second division of meiosis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane disassembly","termid":"GO:0051078"},{"relation_name":"part_of","term_name":"meiosis II","termid":"GO:0007135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"meiosis II nuclear membrane disassembly","synonyms":[{"name":"meiosis II nuclear envelope breakdown","type":"related"},{"name":"meiosis II nuclear envelope catabolism","type":"related"},{"name":"meiosis II nuclear envelope degradation","type":"related"},{"name":"meiosis II nuclear envelope disassembly","type":"related"}],"termid":"GO:0051080"}


id: PBO:0047697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLYWCH-type zinc finger 1","termid":"PBO:0047697"}


id: GO:0072290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to metanephric nephron tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in metanephros development","termid":"GO:0035788"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in nephron tubule morphogenesis","termid":"GO:0072155"},{"relation_name":"part_of","term_name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in metanephric nephron tubule morphogenesis","termid":"GO:0072290"}


id: PBO:0054982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2396","termid":"PBO:0054982"}


id: GO:0006768
data:
  {"annotated_genes":["SJAG_00673","SJAG_01935"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75171,110208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving biotin, cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid; the (+) enantiomer is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00673":null,"SJAG_01935":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"biotin metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Biotin"],"synonyms":[{"name":"biotin metabolism","type":"exact"},{"name":"vitamin B7 metabolic process","type":"exact"},{"name":"vitamin B7 metabolism","type":"exact"},{"name":"vitamin H metabolic process","type":"exact"},{"name":"vitamin H metabolism","type":"exact"}],"termid":"GO:0006768","terms_by_termid":{"GO:0009102":null}}


id: GO:0044217
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"other organism part","termid":"GO:0044217"}


id: PBO:0034399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_formation_of","termid":"PBO:0034399"}


id: GO:0002107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of extra uridine residues from the 3' end of a 5S pre-rRNA generated by transcription by RNA polymerase III to generate the mature 3'-end.","definition_xrefs":["PMID:1902221","GOC:hjd","PMID:16387655","PMID:8389357","PMID:1748637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5S rRNA","termid":"GO:0000481"},{"relation_name":"is_a","term_name":"rRNA 3'-end processing","termid":"GO:0031125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"generation of mature 3'-end of 5S rRNA generated by RNA polymerase III","termid":"GO:0002107"}


id: PBO:0040055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 3","termid":"PBO:0040055"}


id: GO:0052132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis on or near host (obsolete GO:0052132)","termid":"GO:0052132"}


id: PBO:0071598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 15","termid":"PBO:0071598"}


id: GO:0005082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein tyrosine phosphatase signaling protein activity (obsolete GO:0005082)","synonyms":[{"name":"receptor signaling protein tyrosine phosphatase signaling protein activity","type":"exact"},{"name":"receptor signalling protein tyrosine phosphatase signalling protein activity","type":"exact"}],"termid":"GO:0005082"}


id: PBO:0083717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein that functions in assembly of the V0 sector of V-ATPase; functions with other assembly factors; null mutation enhances the vacuolar ATPase (V-ATPase) deficiency of a vma21 mutant impaired in endoplasmic reticulum (ER) retrieval","termid":"PBO:0083717"}


id: GO:1900814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monodictyphenone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"monodictyphenone metabolic process","termid":"GO:1900813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monodictyphenone catabolic process","synonyms":[{"name":"monodictyphenone breakdown","type":"exact"},{"name":"monodictyphenone catabolism","type":"exact"},{"name":"monodictyphenone degradation","type":"exact"}],"termid":"GO:1900814"}


id: GO:1904263
data:
  {"annotated_genes":["SJAG_02605","SJAG_02424","SJAG_00457","SJAG_04496","SJAG_03371","SJAG_03405","SJAG_00561","SJAG_00209","SJAG_02231","SJAG_05184","SJAG_04910"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84196,84487,85576,90449,92231,94142,103256,105376,106652,108970,114440],"is_not":false,"summary":null,"term":"GO:1904263"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["PMID:25366275","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of TOR signaling","termid":"GO:0032008"},{"relation_name":"is_a","term_name":"regulation of TORC1 signaling","termid":"GO:1903432"},{"relation_name":"positively_regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of TORC1 signal transduction","type":"narrow"},{"name":"activation of TORC1 signaling","type":"narrow"},{"name":"positive regulation of TORC1 signal transduction","type":"exact"},{"name":"up regulation of TORC1 signal transduction","type":"exact"},{"name":"up regulation of TORC1 signaling","type":"exact"},{"name":"up-regulation of TORC1 signal transduction","type":"exact"},{"name":"up-regulation of TORC1 signaling","type":"exact"},{"name":"upregulation of TORC1 signal transduction","type":"exact"},{"name":"upregulation of TORC1 signaling","type":"exact"}],"termid":"GO:1904263","terms_by_termid":{"GO:1904263":null}}


id: PBO:0043268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin domain containing 1","termid":"PBO:0043268"}


id: GO:1902983
data:
  {"annotated_genes":["SJAG_00863","SJAG_03495","SJAG_04190","SJAG_00814","SJAG_00884","SJAG_00874","SJAG_01010","SJAG_04877","SJAG_02908","SJAG_04210","SJAG_02182","SJAG_02818","SJAG_02199","SJAG_00272","SJAG_03780","SJAG_05197","SJAG_02667","SJAG_00729","SJAG_01823","SJAG_04879","SJAG_01762"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91186,103353,103456,106057,108386,108626,109270,109677,111209,111379,111504,85729,90089,91364,91397,98945,100341,101028,103088,105220],"is_not":false,"summary":null,"term":"GO:1902983"},{"annotations":[101030,105222,100345,114256,91366,98947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[91367,103089,101031,85730,103458,91398,100346,90091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any DNA strand elongation involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in nuclear cell cycle DNA replication","termid":"GO:1902319"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"DNA strand elongation involved in mitotic DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA strand elongation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902983","terms_by_termid":{"GO:1902983":null,"GO:1903459":null,"GO:1903460":null}}


id: PBO:0018237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Sqt1 (predicted)","termid":"PBO:0018237"}


id: GO:0060350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized as a result of the conversion of initial cartilaginous anlage into bone.","definition_xrefs":["GOC:dph","PMID:11680679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endochondral bone morphogenesis","termid":"GO:0060350"}


id: PBO:0038596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase short chain","termid":"PBO:0038596"}


id: GO:0034465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon monoxide (CO) stimulus.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbon monoxide","termid":"GO:0034465"}


id: GO:2000346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatocyte proliferation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of hepatocyte proliferation","termid":"GO:2000345"},{"relation_name":"negatively_regulates","term_name":"hepatocyte proliferation","termid":"GO:0072574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatocyte proliferation","termid":"GO:2000346"}


id: PBO:0041135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 18","termid":"PBO:0041135"}


id: GO:0033239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"negatively_regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amine metabolic process","synonyms":[{"name":"negative regulation of amine metabolism","type":"exact"},{"name":"negative regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033239"}


id: PBO:0081844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 778","termid":"PBO:0081844"}


id: PBO:0057716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-2","termid":"PBO:0057716"}


id: PBO:0064534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit K pseudogene 2","termid":"PBO:0064534"}


id: FYPO:0008130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translational readthough of a stop codon increases during cytoplasmic translation.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoplasmic translation","termid":"FYPO:0003124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased stop codon readthrough","termid":"FYPO:0008130"}


id: PBO:0074066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 41","termid":"PBO:0074066"}


id: PR:O59826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A voltage-gated potassium channel subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage-gated potassium channel subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.06","secondary_identifiers":["UniProtKB:O59826"],"synonyms":[{"name":"K(+) channel subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-KCNAB1","type":"exact"}],"termid":"PR:O59826"}


id: GO:0036213
data:
  {"annotated_genes":["SJAG_03581","SJAG_00268","SJAG_02700","SJAG_03379","SJAG_04498","SJAG_01665","SJAG_02431","SJAG_00845","SJAG_02645","SJAG_01894","SJAG_04597","SJAG_03703","SJAG_03936","SJAG_04887","SJAG_04077","SJAG_04776","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84434,113962,93783,96818,95022,91417,97049,98545,94168,108417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902404"},{"annotations":[99820],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[106634,90710,90542,83706,109473],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[77046],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031991"}]},"cv_name":"biological_process","definition":"The process of an actomyosin ring getting smaller in diameter.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00268":null,"SJAG_00845":null,"SJAG_01665":null,"SJAG_01894":null,"SJAG_02431":null,"SJAG_02645":null,"SJAG_02700":null,"SJAG_03379":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03703":null,"SJAG_03936":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"contractile ring contraction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"contractile ring constriction","type":"exact"}],"termid":"GO:0036213","terms_by_termid":{"GO:0031991":null,"GO:1902404":null,"GO:1903472":null,"GO:1903473":null}}


id: MOD:00960
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxylic acid group with a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decarboxylated residue","termid":"MOD:00960"}


id: MOD:01049
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-histidine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated histidine","synonyms":[{"name":"HalHis","type":"exact"}],"termid":"MOD:01049"}


id: PBO:0030931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyruvate_dehydrogenase_activity","termid":"PBO:0030931"}


id: MOD:00100
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to L-leucine amide.","definition_xrefs":["PubMed:2578459","RESID:AA0091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-leucine amide","synonyms":[{"name":"(2S)-2-amino-4-methylpentanamide","type":"exact"},{"name":"2-amino-4-methylvaleramide","type":"exact"},{"name":"2-azanyl-4-methylpentanamide","type":"exact"},{"name":"L-leucine amide","type":"exact"},{"name":"LeuN","type":"exact"},{"name":"MOD_RES Leucine amide","type":"exact"},{"name":"alpha-aminoisocaproamide","type":"exact"},{"name":"amidated L-leucine","type":"exact"},{"name":"leucinamide","type":"exact"}],"termid":"MOD:00100"}


id: GO:0005550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odorant binding","termid":"GO:0005549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pheromone binding","termid":"GO:0005550"}


id: PBO:0083005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Daughter cell-specific protein; may regulate cross-talk between the mating and filamentation pathways; deletion affects cell separation after division and sensitivity to alpha-factor and drugs affecting the cell wall; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0083005"}


id: GO:0120185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MBF transcription complex.","definition_xrefs":["PMID:9303312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"MBF transcription complex assembly","synonyms":[{"name":"DSC1 transcription factor complex assembly","type":"exact"},{"name":"MBF complex assembly","type":"exact"},{"name":"Mlu1-box binding factor assembly","type":"exact"}],"termid":"GO:0120185"}


id: PBO:0064137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 4","termid":"PBO:0064137"}


id: PBO:0046748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 3 like 4","termid":"PBO:0046748"}


id: PBO:0041665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACTIN antisense RNA 1","termid":"PBO:0041665"}


id: PBO:0072269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 7","termid":"PBO:0072269"}


id: GO:0050447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-acetyl-L-serine + zeatin = L-lupinate + acetate + H+.","definition_xrefs":["EC:2.5.1.50","RHEA:17333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"zeatin 9-aminocarboxyethyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03133","MetaCyc:BETA-9-CYTOKININ-ALANINE-SYNTHASE-RXN"],"synonyms":[{"name":"3-O-acetyl-L-serine:zeatin 2-amino-2-carboxyethyltransferase activity","type":"related"},{"name":"O-acetyl-L-serine acetate-lyase (adding N(6)-substituted adenine) activity","type":"related"},{"name":"O-acetyl-L-serine acetate-lyase (adding N6-substituted adenine)","type":"related"},{"name":"O3-acetyl-L-serine:zeatin 2-amino-2-carboxyethyltransferase activity","type":"related"},{"name":"beta-(9-cytokinin)-alanine synthase activity","type":"exact"},{"name":"beta-(9-cytokinin)alanine synthase activity","type":"related"},{"name":"lupinate synthetase activity","type":"related"},{"name":"lupinic acid synthase activity","type":"related"},{"name":"lupinic acid synthetase activity","type":"related"}],"termid":"GO:0050447"}


id: PBO:0068205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 512","termid":"PBO:0068205"}


id: PBO:0039168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 1","termid":"PBO:0039168"}


id: GO:0043720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-keto-5-aminohexanoate + acetyl-CoA = L-3-aminobutyryl-CoA + acetoacetate.","definition_xrefs":["PMID:13064","MetaCyc:R125-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"3-keto-5-aminohexanoate cleavage activity","secondary_identifiers":["RHEA:31555"],"synonyms":[{"name":"3-keto-5-aminohexanoate cleavage enzyme","type":"exact"}],"termid":"GO:0043720"}


id: FYECO:0000073
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where DHA (dihydroxyacetone) is the main carbon source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHA minimal medium","synonyms":[{"name":"DHA MM","type":"exact"},{"name":"dihydroxyacetone MM","type":"exact"},{"name":"dihydroxyactone minimal medium","type":"exact"}],"termid":"FYECO:0000073"}


id: PBO:0091733
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously thought to be a ribosomal protein","termid":"PBO:0091733"}


id: FYPO:0002621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of malate dehydrogenase (decarboxylating) (NAD+) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"abnormal 'malic' enzyme activity","type":"related"},{"name":"abnormal (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"abnormal NAD-linked malic enzyme activity","type":"related"},{"name":"abnormal NAD-malic enzyme activity","type":"broad"},{"name":"abnormal NAD-specific malic enzyme activity","type":"related"},{"name":"abnormal malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"FYPO:0002621"}


id: GO:0034305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore formation from the products of mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation","termid":"GO:0043937"},{"relation_name":"is_a","term_name":"regulation of asexual reproduction","termid":"GO:1903664"},{"relation_name":"regulates","term_name":"asexual sporulation","termid":"GO:0030436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of asexual sporulation","synonyms":[{"name":"regulation of asexual spore formation","type":"exact"},{"name":"regulation of mitotic spore formation","type":"exact"},{"name":"regulation of mitotic sporulation","type":"exact"}],"termid":"GO:0034305"}


id: PBO:0062158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 6 pseudogene","termid":"PBO:0062158"}


id: GO:0003054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the suprachiasmatic nucleus modulates blood pressure at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"is_a","term_name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure by the suprachiasmatic nucleus","synonyms":[{"name":"SCN regulation of blood pressure","type":"exact"},{"name":"master pacemaker clock regulation of blood pressure","type":"exact"}],"termid":"GO:0003054"}


id: PBO:0063690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphogluconate dehydrogenase pseudogene 2","termid":"PBO:0063690"}


id: PBO:0068468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 45, pseudogene","termid":"PBO:0068468"}


id: PBO:0052247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 16","termid":"PBO:0052247"}


id: GO:0045300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + O2 + octadecanoyl-[ACP] + 2 reduced [2Fe-2S]-[ferredoxin] = (9Z)-octadecenoyl-[ACP] + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:11776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"stearoyl-[ACP] desaturase activity","secondary_identifiers":["KEGG_REACTION:R03370","MetaCyc:RXN-7903","EC:1.14.19.2"],"synonyms":[{"name":"acyl-[acyl-carrier-protein] desaturase activity","type":"related"},{"name":"acyl-acyl-carrier-protein desaturase activity","type":"related"},{"name":"acyl-acyl-carrier-protein, hydrogen-donor:oxygen oxidoreductase activity","type":"related"},{"name":"stearyl acyl carrier protein desaturase activity","type":"related"},{"name":"stearyl-ACP desaturase activity","type":"related"}],"termid":"GO:0045300"}


id: GO:0015245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fatty acids from one side of a membrane to the other. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"fatty acid transmembrane transporter activity","secondary_identifiers":["GO:0015246","Reactome:R-HSA-879585","Reactome:R-HSA-5627891"],"synonyms":[{"name":"fatty acid transporter activity","type":"related"},{"name":"fatty acyl transporter activity","type":"exact"},{"name":"fatty-acyl group transporter activity","type":"broad"},{"name":"peroxisomal fatty acyl transporter","type":"narrow"}],"termid":"GO:0015245"}


id: PBO:0082580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cholinephosphotransferase; required for phosphatidylcholine biosynthesis and for inositol-dependent regulation of EPT1 transcription; CPT1 has a paralog, EPT1, that arose from the whole genome duplication","termid":"PBO:0082580"}


id: PBO:0005829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf13 (predicted)","termid":"PBO:0005829"}


id: PR:O59829
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC965.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase C965.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.09","synonyms":[{"name":"Spom972h-SPCC965.09","type":"exact"}],"termid":"PR:O59829"}


id: PBO:0068920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 163, pseudogene","termid":"PBO:0068920"}


id: PBO:0076162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1P4-STRA6LP-CCDC180 readthrough","termid":"PBO:0076162"}


id: PBO:0031175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe,_elongated_cell","termid":"PBO:0031175"}


id: PBO:0034109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-realizes","termid":"PBO:0034109"}


id: PBO:0054503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1903","termid":"PBO:0054503"}


id: GO:0052233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in other organism involved in symbiotic interaction (obsolete GO:0052233)","synonyms":[{"name":"positive aerotaxis in other organism during symbiotic interaction","type":"related"},{"name":"positive aerotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052233"}


id: GO:1901505
data:
  {"annotated_genes":["SJAG_02050","SJAG_04406","SJAG_00434","SJAG_00612","SJAG_00276","SJAG_01177","SJAG_00339","SJAG_03452","SJAG_04697","SJAG_03334","SJAG_04325","SJAG_04162","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[97474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[102807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[107007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[86976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[59041,89458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[85143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[108372,89227,89460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071917"},{"annotations":[111665,84543,108485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[108486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[101080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[101081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of carbohydrate derivative from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"carbohydrate derivative transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative transporter activity","type":"related"}],"termid":"GO:1901505","terms_by_termid":{"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0008521":null,"GO:0015228":null,"GO:0046964":null,"GO:0071917":null,"GO:0140987":null,"GO:1902557":null}}


id: GO:0015219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of protein-DNA complexes from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA complex transmembrane transporter activity (obsolete GO:0015219)","synonyms":[{"name":"DNA-protein complex transmembrane transporter activity","type":"exact"}],"termid":"GO:0015219"}


id: GO:0060971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the left/right axis of the embryonic heart tube in space to define an area or volume in which specific patterns of cell differentiation will take place.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left/right pattern formation","termid":"GO:0060972"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube left/right pattern formation","termid":"GO:0060971"}


id: MOD:00287
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a (2S,3R,4S)-3,4-dihydroxyproline.","definition_xrefs":["DeltaMass:0","ChEBI:141803","Unimod:425#P","PubMed:12686488","RESID:AA0282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated proline","termid":"MOD:00866"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R,4S)-3,4-dihydroxyproline","synonyms":[{"name":"(2S,3R,4S)-3,4-dihydroxyproline","type":"exact"},{"name":"(2S,3R,4S)-3,4-dihydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"2,3-trans-3,4-cis-3,4-dihydroxy-L-proline","type":"exact"},{"name":"2-alpha-3-beta-4-beta-3,4-dihydroxyproline","type":"exact"},{"name":"3,4-Dihydroxylation (of Proline)","type":"exact"},{"name":"3,4-dihydroxylated L-proline","type":"exact"},{"name":"34Hy2Pro","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"MOD_RES (3R,4S)-3,4-dihydroxyproline","type":"exact"},{"name":"dihydroxy","type":"related"},{"name":"trans-2,3-cis-3,4-dihydroxy-L-proline","type":"exact"}],"termid":"MOD:00287"}


id: GO:0034154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 7.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 7 signaling pathway","synonyms":[{"name":"TLR7 signaling pathway","type":"exact"},{"name":"toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034154"}


id: PBO:0058300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4674","termid":"PBO:0058300"}


id: PBO:0065354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 4","termid":"PBO:0065354"}


id: SO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A reading frame that could encode a full-length protein but which contains obvious mid-sequence disablements (frameshifts or premature stop codons).","definition_xrefs":["SGD:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reading_frame","termid":"SO:0000717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disabled_reading_frame","synonyms":[{"name":"dORF","type":"exact"},{"name":"disabled ORF","type":"exact"},{"name":"disabled_reading frame","type":"related"}],"termid":"SO:0002048"}


id: PBO:0030929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_citrate_(Si)-synthase_activity","termid":"PBO:0030929"}


id: GO:0050708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of a protein from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of protein secretion","termid":"GO:0050708"}


id: PBO:0005066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein Ent3 (predicted)","termid":"PBO:0005066"}


id: FYPO:0005289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of the mitotic actomyosin contractile ring in the correct location is abnormal.","definition_xrefs":["GO:0032189","PomBase:mah","PMID:26132084"],"direct_ancestors":[{"relation_name":"has_output","term_name":"actomyosin contractile ring displaced from midpoint","termid":"FYPO:0002026"},{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"actomyosin contractile ring sliding","synonyms":[{"name":"abnormal cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"abnormal maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"actomyosin contractile ring sliding during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring sliding during vegetative growth","type":"exact"}],"termid":"FYPO:0005289"}


id: GO:0052866
data:
  {"annotated_genes":["SJAG_03248","SJAG_02706","SJAG_02289","SJAG_00063","SJAG_03131","SJAG_00880","SJAG_03375","SJAG_04545"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016314"},{"annotations":[104412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"},{"annotations":[104413,107274,83907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043813"},{"annotations":[87618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004438"},{"annotations":[97069,104414,107275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004439"},{"annotations":[102087,93037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylinositol phosphate(n) + H2O = phosphatidylinositol phosphate(n-1) + phosphate. This reaction is the removal of a phosphate group from a phosphatidylinositol phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_00880":null,"SJAG_02289":null,"SJAG_02706":null,"SJAG_03131":null,"SJAG_03248":null,"SJAG_03375":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphoinositide phosphatase activity","type":"exact"}],"termid":"GO:0052866","terms_by_termid":{"GO:0004438":null,"GO:0004439":null,"GO:0016314":null,"GO:0034485":null,"GO:0043812":null,"GO:0043813":null}}


id: PBO:0113539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"v-SNARE component of vacuolar SNARE complex; involved in vesicle fusion; inhibits ATP-dependent Ca(2+) transport activity of Pmc1p in vacuolar membrane; targeted to vacuole via AP-3 pathway","termid":"PBO:0113539"}


id: GO:0030091
data:
  {"annotated_genes":["SJAG_00365","SJAG_00419","SJAG_01628"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91700,102711,109575],"is_not":false,"summary":null,"term":"GO:0030091"}]},"cv_name":"biological_process","definition":"The process of restoring a protein to its original state after damage by such things as oxidation or spontaneous decomposition of residues.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00365":null,"SJAG_00419":null,"SJAG_01628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030091","terms_by_termid":{"GO:0030091":null}}


id: GO:0030207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan catabolic process","termid":"GO:0006027"},{"relation_name":"is_a","term_name":"chondroitin sulfate metabolic process","termid":"GO:0030204"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate catabolic process","secondary_identifiers":["MetaCyc:PWY-6573","MetaCyc:PWY-6572"],"synonyms":[{"name":"chondroitin sulfate breakdown","type":"exact"},{"name":"chondroitin sulfate catabolism","type":"exact"},{"name":"chondroitin sulfate degradation","type":"exact"},{"name":"chondroitin sulphate catabolic process","type":"exact"},{"name":"chondroitin sulphate catabolism","type":"exact"}],"termid":"GO:0030207"}


id: GO:0010518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of phospholipase activity, the hydrolysis of a phospholipid.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipase activity","termid":"GO:0010517"},{"relation_name":"is_a","term_name":"positive regulation of lipase activity","termid":"GO:0060193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipase activity","termid":"GO:0010518"}


id: PR:Q09748
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dnm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin-related protein dnm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.08","synonyms":[{"name":"Spom972h-dnm1","type":"exact"}],"termid":"PR:Q09748"}


id: PBO:0074563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 17","termid":"PBO:0074563"}


id: PBO:0079897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 6","termid":"PBO:0079897"}


id: GO:1903271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational elongation through polyproline stretches.","definition_xrefs":["GOC:TermGenie","PMID:24923804","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational elongation","termid":"GO:1900248"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation through polyproline stretches","termid":"GO:1903270"},{"relation_name":"negatively_regulates","term_name":"cytoplasmic translational elongation through polyproline stretches","termid":"GO:0097622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translational elongation through polyproline stretches","synonyms":[{"name":"down regulation of cytoplasmic translational elongation through polyproline stretches","type":"exact"},{"name":"down-regulation of cytoplasmic translational elongation through polyproline stretches","type":"exact"},{"name":"downregulation of cytoplasmic translational elongation through polyproline stretches","type":"exact"},{"name":"inhibition of cytoplasmic translational elongation through polyproline stretches","type":"narrow"}],"termid":"GO:1903271"}


id: PBO:0039514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B pseudogene 2","termid":"PBO:0039514"}


id: PBO:0090028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, metallo-beta-lactamase/beta-CASP protein Cft2","termid":"PBO:0090028"}


id: PBO:0074601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11B","termid":"PBO:0074601"}


id: PBO:0012017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialar to S. pombe SPAC1F8.07c (paralog)","termid":"PBO:0012017"}


id: PBO:0062260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 16","termid":"PBO:0062260"}


id: PBO:0081012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 46","termid":"PBO:0081012"}


id: PBO:0061381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 41","termid":"PBO:0061381"}


id: SO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DsrA RNA regulates both transcription, by overcoming transcriptional silencing by the nucleoid-associated H-NS protein, and translation, by promoting efficient translation of the stress sigma factor, RpoS. These two activities of DsrA can be separated by mutation: the first of three stem-loops of the 85 nucleotide RNA is necessary for RpoS translation but not for anti-H-NS action, while the second stem-loop is essential for antisilencing and less critical for RpoS translation. The third stem-loop, which behaves as a transcription terminator, can be substituted by the trp transcription terminator without loss of either DsrA function. The sequence of the first stem-loop of DsrA is complementary with the upstream leader portion of RpoS messenger RNA, suggesting that pairing of DsrA with the RpoS message might be important for translational regulation.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DsrA_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/DsrA_RNA"],"synonyms":[{"name":"DsrA RNA","type":"exact"}],"termid":"SO:0000378"}


id: PBO:0111760
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family","termid":"PBO:0111760"}


id: GO:0045726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin biosynthetic process","synonyms":[{"name":"activation of integrin biosynthetic process","type":"narrow"},{"name":"positive regulation of integrin anabolism","type":"exact"},{"name":"positive regulation of integrin biosynthesis","type":"exact"},{"name":"positive regulation of integrin formation","type":"exact"},{"name":"positive regulation of integrin synthesis","type":"exact"},{"name":"stimulation of integrin biosynthetic process","type":"narrow"},{"name":"up regulation of integrin biosynthetic process","type":"exact"},{"name":"up-regulation of integrin biosynthetic process","type":"exact"},{"name":"upregulation of integrin biosynthetic process","type":"exact"}],"termid":"GO:0045726"}


id: PBO:0070275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 15","termid":"PBO:0070275"}


id: PR:000050476
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein kinase wis1 (Schizosaccharomyces pombe) that has not been phosphorylated on residues equivalent to Ser-469 and Thr-473 of the amino acid sequence represented by UniProtKB:P33886. Example: UniProtKB:P33886, Ser-469/Thr-473, PR:000026291.","definition_xrefs":["PMID:12181336","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase wis1 (Schizosaccharomyces pombe)","termid":"PR:000050474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wis1/UnPhos:(S469,T473)","pombase_gene_id":"SPBC409.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: protein kinase wis1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-wis1/UnPhos:1","type":"exact"},{"name":"UniProtKB:P33886, Ser-469/Thr-473, PR:000026291","type":"narrow"},{"name":"wis1/UnPhos:(S469,T473)","type":"exact"}],"termid":"PR:000050476"}


id: GO:0045283
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound flavoenzyme complex consisting of four subunits, A, B, C, and D. A and B comprise the membrane-extrinsic catalytic domain and C (InterPro:IPR003510; InterPro:IPR004224) and D (InterPro:IPR003418) link the catalytic centers to the electron-transport chain. This family consists of the 13 kDa hydrophobic subunit D. This component may be required to anchor the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. Fumarate reductase couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, in a reaction opposite to that catalyzed by the related complex II of the respiratory chain (succinate dehydrogenase-(ubiquinone)).","definition_xrefs":["InterPro:IPR003418","InterPro:IPR004224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"respiratory chain complex II (succinate dehydrogenase)","termid":"GO:0045273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"fumarate reductase complex","termid":"GO:0045283"}


id: PBO:0028462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_lemon-shaped_cell","termid":"PBO:0028462"}


id: PBO:0069754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1037, pseudogene","termid":"PBO:0069754"}


id: MOD:01259
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9448752","Unimod:314#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylmaleimide derivatized residue","termid":"MOD:00625"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylmaleimide - site K","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:01259"}


id: GO:0102236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hexen-3-one + NADPH + H+ = hexan-3-one + NADP.","definition_xrefs":["PMID:21169366","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"trans-4-hexen-3-one reductase activity","secondary_identifiers":["MetaCyc:RXN-12296"],"termid":"GO:0102236"}


id: GO:0035917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a calcium channel in another organism.","definition_xrefs":["GOC:bf","GOC:fj","PMID:20920515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of calcium channel activity in another organism","termid":"GO:0035916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium channel activity in another organism","synonyms":[{"name":"down-regulation of calcium channel activity in other organism","type":"exact"},{"name":"downregulation of calcium channel activity in other organism","type":"exact"},{"name":"inhibition of calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035917"}


id: PBO:0070981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 5","termid":"PBO:0070981"}


id: PBO:0040601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 5","termid":"PBO:0040601"}


id: PBO:0052043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kalirin RhoGEF kinase","termid":"PBO:0052043"}


id: GO:0071335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of hair follicle cells, resulting in the expansion of a cell population.","definition_xrefs":["PMID:16086254","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair follicle cell proliferation","termid":"GO:0071335"}


id: PBO:0075959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroidogenic acute regulatory protein","termid":"PBO:0075959"}


id: GO:0106234
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is part of the bacterial outer membrane. An example In E.coli, is RcsF associated with any one of several outer membrane beta-barrel proteins (OMPs), such as OmpA, OmpF, or OmpcC.","definition_xrefs":["GOC:am","PMID:27282389","PMID:25267629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"outer membrane protein complex","termid":"GO:0106234"}


id: PBO:0061587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin G2","termid":"PBO:0061587"}


id: PBO:0065565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 5","termid":"PBO:0065565"}


id: FYPO:0005462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule-based movement occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased microtubule-based movement during vegetative growth","synonyms":[{"name":"decreased microtubule-based movement during mitotic cell cycle","type":"related"},{"name":"reduced microtubule-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005462"}


id: GO:1905396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a flavonoid stimulus.","definition_xrefs":["PMID:22700048","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to flavonoid","termid":"GO:1905395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to flavonoid","termid":"GO:1905396"}


id: PBO:0045361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 1","termid":"PBO:0045361"}


id: GO:0050202
data:
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id: GO:0141188
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id: PBO:0002948
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id: SO:0000422
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id: GO:0051701
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id: PBO:0002601
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id: GO:0003027
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id: GO:1900806
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id: FYPO:0001397
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id: GO:0071840
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id: PBO:0039958
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id: GO:0050054
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id: GO:0010727
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id: GO:0072070
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id: PBO:0045500
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id: PBO:0060685
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id: PBO:0064222
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id: PBO:0004574
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id: GO:0035181
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Digging into the substrate by non-feeding larvae in search for food-free sites suitable for pupation.","definition_xrefs":["PMID:12848927","PMID:12848939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval locomotory behavior","termid":"GO:0008345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval burrowing behavior","synonyms":[{"name":"larval burrowing behaviour","type":"exact"}],"termid":"GO:0035181"}


id: PR:Q9P7N9
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR20902:SF0","OMA:SCHPO03727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.05","secondary_identifiers":["UniProtKB:Q9P7N9"],"synonyms":[{"name":"Spom972h-TRAPPC5","type":"exact"},{"name":"TRAPP subunit trs31 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7N9"}


id: FYPO:0007586
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id: PBO:0077221
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id: PBO:0031135
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id: PBO:0042550
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id: PBO:0078554
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id: PBO:0071639
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id: GO:1901038
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanidin 3-O-beta-D-glucoside.","definition_xrefs":["GOC:TermGenie","PMID:21899608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside metabolic process","synonyms":[{"name":"cyanidin 3-O-beta-D-glucoside metabolic process","type":"exact"},{"name":"cyanidin 3-O-beta-D-glucoside metabolism","type":"exact"}],"termid":"GO:1901038"}


id: PBO:0048568
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GGCT pseudogene 1","termid":"PBO:0048568"}


id: PBO:0036288
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id: PBO:0083527
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SAS10/YDL153C, a component of the small ribosomal subunit processosome","termid":"PBO:0083527"}


id: PBO:0044231
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain containing 2","termid":"PBO:0044231"}


id: PBO:0079651
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 U","termid":"PBO:0079651"}


id: PBO:0053978
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1290","termid":"PBO:0053978"}


id: GO:2001294
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of malonyl-CoA, the S-malonyl derivative of coenzyme A.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate catabolic process","termid":"GO:0034031"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate catabolic process","termid":"GO:0034034"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"malonyl-CoA metabolic process","termid":"GO:2001293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"malonyl-CoA catabolic process","synonyms":[{"name":"malonyl-CoA breakdown","type":"exact"},{"name":"malonyl-CoA catabolism","type":"exact"},{"name":"malonyl-CoA degradation","type":"exact"}],"termid":"GO:2001294"}


id: PBO:0088143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar serine-type carboxypeptidase; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of the autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; localizes to the vacuole lumen; expression induced by nitrogen limitation in a GLN3, GAT1-independent manner; N-glycosylated","termid":"PBO:0088143"}


id: GO:0070814
data:
  {"annotated_genes":["SJAG_04060","SJAG_03475","SJAG_01693","SJAG_05027","SJAG_00084"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83942,84938,86172,103621,113566],"is_not":false,"summary":null,"term":"GO:0070814"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hydrogen sulfide, H2S.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"hydrogen sulfide metabolic process","termid":"GO:0070813"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00084":null,"SJAG_01693":null,"SJAG_03475":null,"SJAG_04060":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"hydrogen sulfide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen sulfide anabolism","type":"exact"},{"name":"hydrogen sulfide biosynthesis","type":"exact"},{"name":"hydrogen sulfide formation","type":"exact"},{"name":"hydrogen sulfide synthesis","type":"exact"},{"name":"hydrogen sulphide biosynthesis","type":"exact"},{"name":"hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:0070814","terms_by_termid":{"GO:0070814":null}}


id: PBO:0110155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome-associated protein, implicated in ribosome assembly or ribosome quality control","termid":"PBO:0110155"}


id: GO:0097267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which arachidonic acid is converted to other compounds initially by omega-hydroxylation.","definition_xrefs":["PMID:10681399","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid metabolic process","termid":"GO:0019369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"omega-hydroxylase P450 pathway","synonyms":[{"name":"P450 omega-hydroxylase pathway","type":"exact"}],"termid":"GO:0097267"}


id: GO:0098746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fast, initial phase of calcium ion-induced neurotransmitter release, via exocytosis, into the synaptic cleft. This depends on low affinity calcium sensors and typically begins a fraction of a millisecond after Ca2+ influx, and decays rapidly (1-10ms) with a decay constant of around 5-10ms. The underlying molecular mechanisms of this process are distinct from those of the later, slow phase of release.","definition_xrefs":["PMID:4405553","GOC:PARL","PMID:7809151","PMID:7954835","GOC:pad","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fast, calcium ion-dependent exocytosis of neurotransmitter","synonyms":[{"name":"synchronous, calcium ion-dependent exocytosis of neurotransmitter","type":"exact"}],"termid":"GO:0098746"}


id: GO:0140459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a Gram-positive bacterium.","definition_xrefs":["PMID:23664307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Gram-positive bacterium","termid":"GO:0140459"}


id: GO:0075325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism disseminates its spores.","definition_xrefs":["Wikipedia:Spore"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore dispersal","secondary_identifiers":["GO:0075326","GO:0075327"],"synonyms":[{"name":"active spore dispersal on or near host","type":"narrow"},{"name":"active spore dispersal on or near host during symbiotic interaction","type":"narrow"},{"name":"passive spore dispersal on or near host","type":"narrow"},{"name":"spore dispersal on or near host","type":"narrow"},{"name":"spore dispersal on or near host during symbiotic interaction","type":"exact"}],"termid":"GO:0075325"}


id: GO:1905209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiocyte differentiation.","definition_xrefs":["GOC:TermGenie","GOC:bc","PMID:23069713","GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"positively_regulates","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiocyte differentiation","synonyms":[{"name":"activation of cardiac cell differentiation","type":"narrow"},{"name":"activation of cardiocyte differentiation","type":"narrow"},{"name":"activation of heart cell differentiation","type":"narrow"},{"name":"positive regulation of cardiac cell differentiation","type":"exact"},{"name":"positive regulation of heart cell differentiation","type":"exact"},{"name":"up regulation of cardiac cell differentiation","type":"exact"},{"name":"up regulation of cardiocyte differentiation","type":"exact"},{"name":"up regulation of heart cell differentiation","type":"exact"},{"name":"up-regulation of cardiac cell differentiation","type":"exact"},{"name":"up-regulation of cardiocyte differentiation","type":"exact"},{"name":"up-regulation of heart cell differentiation","type":"exact"},{"name":"upregulation of cardiac cell differentiation","type":"exact"},{"name":"upregulation of cardiocyte differentiation","type":"exact"},{"name":"upregulation of heart cell differentiation","type":"exact"}],"termid":"GO:1905209"}


id: PBO:0039264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 9 family member A1","termid":"PBO:0039264"}


id: PBO:0091794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane siderophore-iron transmembrane transporter Str1","termid":"PBO:0091794"}


id: PBO:0081854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 787","termid":"PBO:0081854"}


id: PATO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000747 coordination value (obsolete PATO:0000747)","termid":"PATO:0000747"}


id: FYPO:0004418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, and in which the export of polyadenylated mRNA from the nucleus is decreased. The daughter cells produced by septation are both inviable. Export of all polyadenylated mRNAs or a specific mRNA may be affected.","definition_xrefs":["PMID:14511667","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"has_part","term_name":"decreased poly(A)+ mRNA export from nucleus","termid":"FYPO:0002522"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000337","FYPO:0006551","FYPO:0000004","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"cut cell with decreased poly(A)+ mRNA export from nucleus","synonyms":[{"name":"cut cell with decreased poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"cut cell with decreased poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"cut cell with reduced poly(A)+ mRNA export from nucleus","type":"exact"},{"name":"cut with decreased poly(A)+ mRNA export from nucleus","type":"exact"},{"name":"decreased poly(A) mRNA export in cut","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation with decreased poly(A)+ mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0004418"}


id: GO:0016658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on NADH or NADPH, flavin as acceptor (obsolete GO:0016658)","synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, flavin as acceptor","type":"exact"}],"termid":"GO:0016658"}


id: PBO:0038462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 2","termid":"PBO:0038462"}


id: PBO:0085337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoglucomutase; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; functions as the acceptor for a Glc-phosphotransferase; protein abundance increases in response to DNA replication stress; PGM2 has a paralog, PGM1, that arose from the whole genome duplication","termid":"PBO:0085337"}


id: GO:0071654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 1 production","termid":"GO:0071652"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 1 production","termid":"GO:0071610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"positive regulation of CCL1 production","type":"exact"},{"name":"positive regulation of T cell activation 3 production","type":"exact"},{"name":"positive regulation of TCA-3 production","type":"exact"}],"termid":"GO:0071654"}


id: PBO:0016550
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cereviaiae YKR002W","termid":"PBO:0016550"}


id: PBO:0080243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 6, pseudogene","termid":"PBO:0080243"}


id: GO:0017042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycosyl-N-acylsphingosine + H2O = a sugar + N-acylsphingosine.","definition_xrefs":["PMID:9762914","PMID:10692580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"glycosylceramidase activity","secondary_identifiers":["MetaCyc:GLYCOSYLCERAMIDASE-RXN","MetaCyc:GALACTOSYLCERAMIDASE-RXN","MetaCyc:RXN-22900","EC:3.2.1.62"],"synonyms":[{"name":"cerebrosidase activity","type":"related"},{"name":"glycosyl ceramide glycosylhydrolase activity","type":"related"},{"name":"glycosyl-N-acylsphingosine glycohydrolase activity","type":"related"}],"termid":"GO:0017042"}


id: GO:0034586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 21U-RNAs, a class of single-stranded RNA molecules of about 21 nucleotides in length characterized by a uridine 5'-monophosphate and a modified 3' end resistant to periodate degradation. 21U-RNAs are derived from distinct, autonomously expressed loci within the genome.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"21U-RNA metabolic process","termid":"GO:0034585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"21U-RNA catabolic process","synonyms":[{"name":"21U-RNA breakdown","type":"exact"},{"name":"21U-RNA catabolism","type":"exact"},{"name":"21U-RNA degradation","type":"exact"}],"termid":"GO:0034586"}


id: PBO:0041781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caprin family member 2","termid":"PBO:0041781"}


id: MOD:01958
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a two-iron two-sulfur cluster to bis-L-cysteinyl bisglutathion-S-yl diiron disulfide.","definition_xrefs":["PubMed:17121859","RESID:AA0603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis-L-cysteinyl bisglutathion-S-yl diiron disulfide","synonyms":[{"name":"bis-L-cysteinyl bisglutathion-S-yl diiron disulfide","type":"exact"},{"name":"di-mu-sulfido-bis(cysteinato)-1kappaS,2kappaS-bis(glutathionato)-1kappaS,2kappaS-diiron","type":"exact"},{"name":"mitochondrial glutaredoxin 2 dimer iron-sulfur cluster","type":"exact"},{"name":"plant glutaredoxin C1 dimer iron-sulfur cluster","type":"exact"}],"termid":"MOD:01958"}


id: FYPO:0007158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3 binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:31584934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone binding","termid":"FYPO:0007157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased histone H3 binding","synonyms":[{"name":"decreased protein-histone H3 interaction","type":"exact"},{"name":"reduced histone H3 binding","type":"exact"}],"termid":"FYPO:0007158"}


id: PBO:0088174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xylose and arabinose reductase; member of the aldo-keto reductase (AKR) family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS","termid":"PBO:0088174"}


id: GO:0005054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome integral membrane receptor (obsolete GO:0005054)","synonyms":[{"name":"Pas20p","type":"related"},{"name":"peroxisome integral membrane receptor","type":"exact"}],"termid":"GO:0005054"}


id: FYPO:0006330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the attachment of an endoplasmic reticulum membrane to the plasma membrane via molecular tethers occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0061817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased endoplasmic reticulum-plasma membrane tethering","synonyms":[{"name":"abnormal ER-PM contact formation","type":"related"},{"name":"decreased ER-PM tethering","type":"exact"},{"name":"decreased ER-plasma membrane tethering","type":"exact"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during mitotic cell cycle","type":"related"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during vegetative growth","type":"exact"},{"name":"increased ER-PM contact removal","type":"related"},{"name":"increased ER-PM uncoupling","type":"related"},{"name":"reduced endoplasmic reticulum-plasma membrane tethering","type":"exact"}],"termid":"FYPO:0006330"}


id: PBO:0081849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 782","termid":"PBO:0081849"}


id: PBO:0087747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the THO and TREX complexes; THO connects transcription elongation and mitotic recombination, and TREX is recruited to activated genes and couples transcription to mRNA export; involved in telomere maintenance","termid":"PBO:0087747"}


id: GO:0000709
data:
  {"annotated_genes":["SJAG_00623","SJAG_01708","SJAG_03751","SJAG_04950","SJAG_02708","SJAG_02267","SJAG_03221","SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84654,88997,93052,96662,97636,103776,106413,113195],"is_not":false,"summary":null,"term":"GO:0000709"}]},"cv_name":"biological_process","definition":"The conversion of the paired broken DNA and homologous duplex DNA into a four-stranded branched intermediate, known as a joint molecule, formed during meiotic recombination. These joint molecules contain Holliday junctions on either side of heteroduplex DNA.","definition_xrefs":["GOC:elh","PMID:8521495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null,"SJAG_01708":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150","GO:0006310","GO:0140013"],"is_obsolete":false,"name":"meiotic joint molecule formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000709","terms_by_termid":{"GO:0000709":null}}


id: GO:0003159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of an endothelium is generated and organized. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"endothelium development","termid":"GO:0003158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an endothelium","termid":"GO:0003159"}


id: PBO:0068431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 1","termid":"PBO:0068431"}


id: PBO:0088882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H4-K20 methyltransferase Set9","termid":"PBO:0088882"}


id: GO:0039655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transport of a virus between adjacent cells in a multicellular organism using plasmodesmata. Plasmodesma is a fine cytoplasmic channel found in all higher plants, which connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["UniProtKB-KW:KW-0916","VZ:1018"],"gene_count":0,"genotype_count":0,"name":"obsolete transport of virus in host, cell to cell via plasmodesmata (obsolete GO:0039655)","synonyms":[{"name":"spread of virus in host, cell to cell via plasmodesmata","type":"related"},{"name":"viral movement protein","type":"related"}],"termid":"GO:0039655"}


id: PBO:0005232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase Pin1","termid":"PBO:0005232"}


id: PBO:0000192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein Asl1, predicted O-glucosyl hydrolase","termid":"PBO:0000192"}


id: GO:0070495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thrombin-activated receptor protein signaling pathway activity. A thrombin receptor signaling pathway is the series of molecular signals generated as a consequence of a thrombin-activated receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of thrombin-activated receptor signaling pathway","termid":"GO:0070494"},{"relation_name":"negatively_regulates","term_name":"thrombin-activated receptor signaling pathway","termid":"GO:0070493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of thrombin-activated receptor signaling pathway","synonyms":[{"name":"negative regulation of thrombin receptor signaling pathway","type":"exact"},{"name":"negative regulation of thrombin receptor signalling pathway","type":"related"}],"termid":"GO:0070495"}


id: GO:1905087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bioluminescence.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:10913092","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of bioluminescence","termid":"GO:1905085"},{"relation_name":"positively_regulates","term_name":"bioluminescence","termid":"GO:0008218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bioluminescence","synonyms":[{"name":"activation of bioluminescence","type":"narrow"},{"name":"up regulation of bioluminescence","type":"exact"},{"name":"up-regulation of bioluminescence","type":"exact"},{"name":"upregulation of bioluminescence","type":"exact"}],"termid":"GO:1905087"}


id: PBO:0061320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member A7","termid":"PBO:0061320"}


id: PBO:0060360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoferlin","termid":"PBO:0060360"}


id: PBO:0065212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripherin 2","termid":"PBO:0065212"}


id: GO:0046511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphinganine, D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine metabolic process","termid":"GO:0006667"},{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"sphingoid biosynthetic process","termid":"GO:0046520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphinganine biosynthetic process","synonyms":[{"name":"dihydrosphingosine biosynthesis","type":"exact"},{"name":"dihydrosphingosine biosynthetic process","type":"exact"},{"name":"sphinganine anabolism","type":"exact"},{"name":"sphinganine biosynthesis","type":"exact"},{"name":"sphinganine formation","type":"exact"},{"name":"sphinganine synthesis","type":"exact"}],"termid":"GO:0046511"}


id: PBO:0059848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1","termid":"PBO:0059848"}


id: PBO:0066411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reelin","termid":"PBO:0066411"}


id: GO:0102038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-nitrobenzyl alcohol + O2 = 4-nitrobenzaldehyde + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-nitrobenzyl alcohol oxidase activity","secondary_identifiers":["MetaCyc:R362-RXN"],"termid":"GO:0102038"}


id: GO:0033838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol 3-O-beta-D-glucoside = UDP + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"flavonol-3-O-glucoside glucosyltransferase activity","secondary_identifiers":["RHEA:18893","MetaCyc:2.4.1.239-RXN"],"synonyms":[{"name":"UDP-glucose:flavonol-3-O-glucoside 2''-O-beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033838"}


id: GO:0141086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of inflammasome-mediated signaling pathway","termid":"GO:0141085"},{"relation_name":"negatively_regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"negative regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141086"}


id: GO:1900372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of purine nucleotide biosynthetic processes.","definition_xrefs":["GOC:TermGenie","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide biosynthetic process","termid":"GO:0030809"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"negatively_regulates","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"negative regulation of purine nucleotide biosynthetic process","synonyms":[{"name":"down regulation of purine nucleotide anabolism","type":"exact"},{"name":"down regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"down regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"down regulation of purine nucleotide formation","type":"exact"},{"name":"down regulation of purine nucleotide synthesis","type":"exact"},{"name":"down-regulation of purine nucleotide anabolism","type":"exact"},{"name":"down-regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"down-regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of purine nucleotide formation","type":"exact"},{"name":"down-regulation of purine nucleotide synthesis","type":"exact"},{"name":"downregulation of purine nucleotide anabolism","type":"exact"},{"name":"downregulation of purine nucleotide biosynthesis","type":"exact"},{"name":"downregulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of purine nucleotide formation","type":"exact"},{"name":"downregulation of purine nucleotide synthesis","type":"exact"},{"name":"inhibition of purine nucleotide anabolism","type":"exact"},{"name":"inhibition of purine nucleotide biosynthesis","type":"exact"},{"name":"inhibition of purine nucleotide biosynthetic process","type":"narrow"},{"name":"inhibition of purine nucleotide formation","type":"exact"},{"name":"inhibition of purine nucleotide synthesis","type":"exact"},{"name":"negative regulation of purine nucleotide anabolism","type":"exact"},{"name":"negative regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of purine nucleotide formation","type":"exact"},{"name":"negative regulation of purine nucleotide synthesis","type":"exact"}],"termid":"GO:1900372"}


id: PBO:0068792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 29, pseudogene","termid":"PBO:0068792"}


id: GO:1905322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal stem cell migration.","definition_xrefs":["PMID:26846297","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell migration","termid":"GO:1905320"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell migration","termid":"GO:1905319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal stem cell migration","synonyms":[{"name":"activation of mesenchymal stem cell migration","type":"narrow"},{"name":"up regulation of mesenchymal stem cell migration","type":"exact"},{"name":"up-regulation of mesenchymal stem cell migration","type":"exact"},{"name":"upregulation of mesenchymal stem cell migration","type":"exact"}],"termid":"GO:1905322"}


id: GO:1903666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asexual reproduction.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24390142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual reproduction","termid":"GO:1903664"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asexual reproduction","synonyms":[{"name":"activation of asexual reproduction","type":"narrow"},{"name":"up regulation of asexual reproduction","type":"exact"},{"name":"up-regulation of asexual reproduction","type":"exact"},{"name":"upregulation of asexual reproduction","type":"exact"}],"termid":"GO:1903666"}


id: PBO:0051693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80B-WBP1 readthrough (NMD candidate)","termid":"PBO:0051693"}


id: GO:2000722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905063"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac vascular smooth muscle cell differentiation","synonyms":[{"name":"regulation of heart vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000722"}


id: PR:Q92342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F8.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.04c","synonyms":[{"name":"Spom972h-SPAC1F8.04c","type":"exact"}],"termid":"PR:Q92342"}


id: FYPO:0007742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring assembly begins during interphase of the mitotic cell cycle. Contractile ring assembly normally begins during M phase.","definition_xrefs":["PomBase:mah","PMID:20226666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature actomyosin contractile ring assembly","termid":"FYPO:0007211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"premature actomyosin contractile ring assembly during mitotic interphase","synonyms":[{"name":"advanced actomyosin contractile ring assembly during mitotic interphase","type":"exact"},{"name":"premature actomyosin contractile ring assembly during interphase during vegetative growth","type":"exact"},{"name":"premature actomyosin contractile ring assembly during interphase of mitotic cell cycle","type":"exact"},{"name":"premature actomyosin contractile ring formation during mitotic interphase","type":"related"},{"name":"premature contractile ring assembly during mitotic interphase","type":"exact"},{"name":"premature cytokinetic contractile ring assembly during mitotic interphase","type":"exact"},{"name":"premature mitotic actomyosin contractile ring assembly during mitotic interphase","type":"exact"},{"name":"premature mitotic contractile ring assembly during mitotic interphase","type":"exact"}],"termid":"FYPO:0007742"}


id: GO:0047608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylindoxyl + O2 = N-acetylisatin + unknown.","definition_xrefs":["MetaCyc:ACETYLINDOXYL-OXIDASE-RXN","EC:1.7.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","termid":"GO:0016663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetylindoxyl oxidase activity","secondary_identifiers":["RHEA:16941"],"synonyms":[{"name":"N-acetylindoxyl:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047608"}


id: GO:0031253
data:
  {"annotated_genes":["SJAG_02989","SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95098,84311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070250"}]},"cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a plasma membrane bounded cell surface projection.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01978":null,"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cell projection membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane extension","type":"related"},{"name":"membrane projection","type":"related"}],"termid":"GO:0031253","terms_by_termid":{"GO:0070250":null}}


id: MOD:01885
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a biotinyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"biotinylated residue","synonyms":[{"name":"5-((3aS,4S,6aR)-hexahydro-2-oxo-1H-thieno[3,4-d]imidazol-4-yl)-1-oxopentyl","type":"exact"},{"name":"Biotinylation","type":"exact"},{"name":"BtnRes","type":"exact"}],"termid":"MOD:01885"}


id: GO:0050343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NAD+ = trans-didehydroacyl-CoA + NADH.","definition_xrefs":["EC:1.3.1.44","MetaCyc:TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"trans-2-enoyl-CoA reductase (NADH) activity","secondary_identifiers":["RHEA:18177"],"synonyms":[{"name":"acyl-CoA:NAD+ trans-2-oxidoreductase activity","type":"related"}],"termid":"GO:0050343"}


id: GO:0030352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,4,5,6-tetrakisphosphate + H2O = inositol-1,4,5-trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"inositol-1,4,5,6-tetrakisphosphate 6-phosphatase activity","termid":"GO:0030352"}


id: PBO:0074700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70J","termid":"PBO:0074700"}


id: MOD:01087
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a 2,4,5-trichlorophenyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,4,5-trichlorophenyl modified residue","termid":"MOD:01087"}


id: FYPO:0000495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal mitochondrial transport","synonyms":[{"name":"abnormal mitochondrial transport during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial transport during vegetative growth","type":"exact"},{"name":"mitochondrial transport: abnormal","type":"related"}],"termid":"FYPO:0000495"}


id: GO:0051401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a calponin homology protein domain, a domain of 100 residues that occurs in signaling and cytoskeletal proteins.","definition_xrefs":["Prosite:PDOC50021","PMID:11911887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"CH domain binding","synonyms":[{"name":"calponin homology domain binding","type":"exact"}],"termid":"GO:0051401"}


id: GO:0045820
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72047,75038],"is_not":false,"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glycolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycolytic process","termid":"GO:0006110"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide catabolic process","termid":"GO:0033122"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of ATP metabolic process","termid":"GO:1903579"},{"relation_name":"negatively_regulates","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0008150","GO:0055086","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glycolytic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of glycolysis","type":"exact"},{"name":"down-regulation of glycolysis","type":"exact"},{"name":"downregulation of glycolysis","type":"exact"},{"name":"inhibition of glycolysis","type":"narrow"}],"termid":"GO:0045820","terms_by_termid":{"GO:0045820":null}}


id: PBO:0011409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_output_o_axis_of","termid":"PBO:0011409"}


id: GO:0050831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A set of reactions, specific to males, that are triggered in response to the presence of a bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male-specific defense response to bacterium","synonyms":[{"name":"male-specific antibacterial peptide activity","type":"related"},{"name":"male-specific defence response to bacteria","type":"exact"},{"name":"male-specific defence response to bacterium","type":"exact"},{"name":"male-specific defense response to bacteria","type":"exact"}],"termid":"GO:0050831"}


id: PBO:0003431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monooxygenase Coq6 (predicted)","termid":"PBO:0003431"}


id: PBO:0074039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 24","termid":"PBO:0074039"}


id: PBO:0077618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 4 Y-linked","termid":"PBO:0077618"}


id: PBO:0038507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 2","termid":"PBO:0038507"}


id: PBO:0065062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2","termid":"PBO:0065062"}


id: PBO:0067071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 100, pseudogene","termid":"PBO:0067071"}


id: GO:0045232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an S-layer enveloping the cell. The S-layer is a crystalline protein layer surrounding some bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"S-layer organization","synonyms":[{"name":"S-layer organisation","type":"exact"},{"name":"S-layer organization and biogenesis","type":"related"}],"termid":"GO:0045232"}


id: PBO:0026745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_glucose_starvation","termid":"PBO:0026745"}


id: GO:0046834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing one or more phosphate groups into a lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents.","definition_xrefs":["GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid phosphorylation","termid":"GO:0046834"}


id: GO:0047502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-cis-sabinol + NAD+ = (1S,5S)-sabinone + H+ + NADH.","definition_xrefs":["RHEA:18329","EC:1.1.1.228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(+)-sabinol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03745","MetaCyc:+-SABINOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(+)-cis-sabinol dehydrogenase activity","type":"related"},{"name":"(+)-cis-sabinol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047502"}


id: FYPO:0002764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which tRNA (guanine(9)-N(1))-methyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished tRNA methyltransferase activity","termid":"FYPO:0001773"},{"relation_name":"is_a","term_name":"abnormal tRNA (guanine(9)-N(1))-methyltransferase activity","termid":"FYPO:0002763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished tRNA (guanine(9)-N(1))-methyltransferase activity","synonyms":[{"name":"tRNA (guanine(9)-N(1))-methyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0002764"}


id: GO:0050231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carbamoyl phosphate + putrescine = N-carbamoylputrescine + H+ + phosphate.","definition_xrefs":["RHEA:21936","EC:2.1.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"putrescine carbamoyltransferase activity","secondary_identifiers":["MetaCyc:PUTRESCINE-CARBAMOYLTRANSFERASE-RXN","KEGG_REACTION:R01399"],"synonyms":[{"name":"PTCase activity","type":"related"},{"name":"carbamoyl-phosphate:putrescine carbamoyltransferase activity","type":"related"},{"name":"putrescine synthase activity","type":"related"},{"name":"putrescine transcarbamylase activity","type":"related"}],"termid":"GO:0050231"}


id: PBO:0088094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uncharacterized protein of unknown function","termid":"PBO:0088094"}


id: PBO:0079698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBL7 divergent transcript","termid":"PBO:0079698"}


id: GO:0009529
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the plastid envelope.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope lumen","termid":"GO:0031970"},{"relation_name":"part_of","term_name":"plastid envelope","termid":"GO:0009526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid intermembrane space","synonyms":[{"name":"plastid envelope lumen","type":"exact"}],"termid":"GO:0009529"}


id: PR:P58234
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1901 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P58234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S19-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.13","synonyms":[{"name":"S16-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps1901","type":"exact"}],"termid":"PR:P58234"}


id: GO:0072240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the distal convoluted tubule cells of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DCT cell differentiation","termid":"GO:0072069"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric DCT cell differentiation","synonyms":[{"name":"metanephric distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:0072240"}


id: PBO:0088722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA demethylase","termid":"PBO:0088722"}


id: PBO:0045531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene","termid":"PBO:0045531"}


id: GO:0009213
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine deoxyribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate catabolic process","termid":"GO:0009149"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside triphosphate breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009213","terms_by_termid":{"GO:0046081":null}}


id: PBO:0056563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance 10 replication initiation factor","termid":"PBO:0056563"}


id: GO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner layer of a double or triple concentric icosahedral capsid. Inner capsids are part of reoviridae and cystoviridae virions.","definition_xrefs":["UniProtKB-KW:KW-1153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral inner capsid","synonyms":[{"name":"inner capsid","type":"exact"}],"termid":"GO:0039625"}


id: PBO:0084806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; MLO1 is not an essential gene","termid":"PBO:0084806"}


id: PBO:0091420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD binding dehydrogenase family protein, human DHDH ortholog, unknown biological role, implicated in carbohydrate metabolic process","termid":"PBO:0091420"}


id: PBO:0030789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spherical_vegetative_cell","termid":"PBO:0030789"}


id: PBO:0080046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 19","termid":"PBO:0080046"}


id: PBO:0088573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex cyclin subunit Srb11","termid":"PBO:0088573"}


id: PBO:0056203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A11","termid":"PBO:0056203"}


id: PBO:0005423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur protein Isa1","termid":"PBO:0005423"}


id: PBO:0074093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 8","termid":"PBO:0074093"}


id: PBO:0071437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 43","termid":"PBO:0071437"}


id: PBO:0034187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_orthology_relationship_with","termid":"PBO:0034187"}


id: PBO:0059155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallophosphoesterase 1","termid":"PBO:0059155"}


id: PBO:0085229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of the CCR4-NOT transcriptional regulatory complex; involved in controlling mRNA initiation, elongation, and degradation; contains a PH-like domain; CAF120 has a paralog, SKG3, that arose from the whole genome duplication","termid":"PBO:0085229"}


id: PATO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence quality inhering in a bearer by virtue of the bearer's having a course that occurs occasionally.","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic","termid":"PATO:0002630"}


id: FYPO:0001852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal when the cell is subject to iron ion starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level during cellular response to iron ion starvation","termid":"FYPO:0002042"},{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"decreased transcription during iron starvation","synonyms":[{"name":"decreased transcription during iron depletion","type":"exact"},{"name":"decreased transcription during iron deprivation","type":"exact"},{"name":"decreased transcription during iron ion starvation","type":"exact"},{"name":"decreased transcription during iron starvation during mitotic cell cycle","type":"related"},{"name":"decreased transcription during iron starvation during vegetative growth","type":"exact"},{"name":"reduced transcription during iron starvation","type":"exact"}],"termid":"FYPO:0001852"}


id: GO:0004228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of gelatin type I and collagen types IV, V, VII, X. Cleaves the collagen-like sequence Pro-Gln-Gly-Ile-Ala-Gly-Gln at the Gly-Ile bond.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gelatinase A activity (obsolete GO:0004228)","synonyms":[{"name":"3/4 collagenase activity","type":"related"},{"name":"72 kDa gelatinase type A","type":"related"},{"name":"72-kDa gelatinase activity","type":"narrow"},{"name":"MMP 2","type":"related"},{"name":"MMP-2","type":"exact"},{"name":"collagenase IV","type":"related"},{"name":"collagenase type IV","type":"related"},{"name":"gelatinase A activity","type":"exact"},{"name":"matrix metalloproteinase 2 activity","type":"related"},{"name":"matrix metalloproteinase 5","type":"related"},{"name":"type IV collagen metalloproteinase","type":"broad"},{"name":"type IV collagenase activity","type":"related"},{"name":"type IV collagenase/gelatinase activity","type":"related"}],"termid":"GO:0004228"}


id: PBO:0077381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 121B","termid":"PBO:0077381"}


id: PBO:0061635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16","termid":"PBO:0061635"}


id: PBO:0079108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22 domain family member 3","termid":"PBO:0079108"}


id: PBO:0076942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFPI2 divergent transcript","termid":"PBO:0076942"}


id: PBO:0077243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 4","termid":"PBO:0077243"}


id: SO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001051 nested_region (obsolete SO:0001051)","termid":"SO:0001051"}


