# terms

id: PBO:0002633
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.46","termid":"PBO:0002633"}


id: PBO:0054659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2065","termid":"PBO:0054659"}


id: GO:0047449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-L-arabinonate = 2,5-dioxopentanoate + H2O.","definition_xrefs":["RHEA:17201","EC:4.2.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-L-arabinonate dehydratase activity","secondary_identifiers":["MetaCyc:4.2.1.43-RXN","KEGG_REACTION:R02278"],"synonyms":[{"name":"2-dehydro-3-deoxy-L-arabinonate hydro-lyase (2,5-dioxopentanoate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-L-arabinonate hydro-lyase activity","type":"related"},{"name":"2-keto-3-deoxy-L-arabinonate dehydratase activity","type":"related"}],"termid":"GO:0047449"}


id: MOD:01096
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-benzyl-L-threonine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-benzyl-L-threonine","termid":"MOD:01096"}


id: PBO:0060721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A9","termid":"PBO:0060721"}


id: PBO:0060312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYLK antisense RNA 2","termid":"PBO:0060312"}


id: PR:O94262
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vac7 gene.","definition_xrefs":["UniProtKB:O94262","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar segregation protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.13","synonyms":[{"name":"Spom972h-vac7","type":"exact"}],"termid":"PR:O94262"}


id: GO:0002022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurological process in which the brain senses excessive caloric intake.","definition_xrefs":["PMID:12161655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"part_of","term_name":"response to dietary excess","termid":"GO:0002021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of dietary excess","termid":"GO:0002022"}


id: PBO:0062125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 5","termid":"PBO:0062125"}


id: GO:0019568
data:
  {"annotated_genes":["SJAG_03958","SJAG_02010","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91149,91884,97295],"is_not":false,"summary":null,"term":"GO:0019568"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arabinose, arabino-pentose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose catabolic process","termid":"GO:0019323"},{"relation_name":"is_a","term_name":"arabinose metabolic process","termid":"GO:0019566"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"arabinose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arabinose breakdown","type":"exact"},{"name":"arabinose catabolism","type":"exact"},{"name":"arabinose degradation","type":"exact"}],"termid":"GO:0019568","terms_by_termid":{"GO:0019568":null}}


id: PBO:0113465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2, a regulator of plasma membrane (PM) homeostasis; TORC2 also regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; interacts with Slm1p and Slm2p, homologous PH domain-containing TORC2 substrates; BIT2 has a paralog, BIT61, that arose from the whole genome duplication","termid":"PBO:0113465"}


id: SO:1000032
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence alteration which included an insertion and a deletion, affecting 2 or more bases.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delins","secondary_identifiers":["http://en.wikipedia.org/wiki/Indel","loinc:LA9659-9"],"synonyms":[{"name":"deletion-insertion","type":"exact"},{"name":"indel","type":"exact"}],"termid":"SO:1000032"}


id: GO:0045716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of low-density lipoprotein receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045716)","synonyms":[{"name":"activation of low-density lipoprotein receptor biosynthetic process","type":"narrow"},{"name":"positive regulation of low-density lipoprotein receptor anabolism","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor formation","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor synthesis","type":"exact"},{"name":"stimulation of low-density lipoprotein receptor biosynthetic process","type":"narrow"},{"name":"up regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor biosynthetic process","type":"exact"}],"termid":"GO:0045716"}


id: GO:0043515
data:
  {"annotated_genes":["SJAG_00684"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115444],"is_not":false,"summary":null,"term":"GO:0043515"}]},"cv_name":"molecular_function","definition":"Binding to a kinetochore, a proteinaceous structure on a condensed chromosome, beside the centromere, to which the spindle fibers are attached.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"kinetochore binding","references_by_uniquename":{"PMID:32109380":null},"termid":"GO:0043515","terms_by_termid":{"GO:0043515":null}}


id: PBO:0073112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1","termid":"PBO:0073112"}


id: GO:0036113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of very long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a very long-chain fatty-acyl group. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"very long-chain fatty-acyl-CoA metabolic process","termid":"GO:0036111"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248","GO:0044281","GO:0006790","GO:0055086"],"is_obsolete":false,"name":"very long-chain fatty-acyl-CoA catabolic process","synonyms":[{"name":"very long-chain fatty-acyl-CoA breakdown","type":"exact"},{"name":"very long-chain fatty-acyl-CoA catabolism","type":"exact"},{"name":"very long-chain fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036113"}


id: GO:0019612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-toluenecarboxylate metabolic process","termid":"GO:0019611"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"4-toluenecarboxylate catabolic process","secondary_identifiers":["MetaCyc:4TOLCARBDEG-PWY"],"synonyms":[{"name":"4-toluenecarboxylate breakdown","type":"exact"},{"name":"4-toluenecarboxylate catabolism","type":"exact"},{"name":"4-toluenecarboxylate degradation","type":"exact"},{"name":"p-toluate catabolic process","type":"exact"},{"name":"p-toluate catabolism","type":"exact"}],"termid":"GO:0019612"}


id: PBO:0087703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme","termid":"PBO:0087703"}


id: GO:0070493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by thrombin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","PMID:1672265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"thrombin-activated receptor signaling pathway","synonyms":[{"name":"thrombin receptor signaling pathway","type":"exact"},{"name":"thrombin receptor signalling pathway","type":"exact"}],"termid":"GO:0070493"}


id: PBO:0058018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3944","termid":"PBO:0058018"}


id: GO:0042254
data:
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id: GO:0018353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycocyanobilin to phycocyanin or allophycocyanin via S-phycocyanobilin-L-cysteine.","definition_xrefs":["RESID:AA0131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phycocyanobilin linkage","termid":"GO:0017009"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycocyanobilin linkage via S-phycocyanobilin-L-cysteine","secondary_identifiers":["GO:0018380"],"termid":"GO:0018353"}


id: PR:O94354
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An argininosuccinate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02459","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.05c","secondary_identifiers":["UniProtKB:O94354"],"synonyms":[{"name":"Spom972h-ASS1","type":"exact"},{"name":"citrulline--aspartate ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94354"}


id: GO:0070806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phialide development, a process that leads to the formation of phialides. Phialides are specialized cells that bud from the ends of metulae on the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of conidiophore development","termid":"GO:0070794"},{"relation_name":"is_a","term_name":"regulation of phialide development","termid":"GO:0070805"},{"relation_name":"negatively_regulates","term_name":"phialide development","termid":"GO:0070790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phialide development","termid":"GO:0070806"}


id: GO:2000988
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemicellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"regulates","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of hemicellulose catabolic process","synonyms":[{"name":"regulation of hemicellulose catabolism","type":"exact"}],"termid":"GO:2000988"}


id: MOD:00270
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to an internal 1-thioglycine.","definition_xrefs":["RESID:AA0265#INT","PubMed:11463785","PubMed:9367957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-thioglycine","termid":"MOD:01625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-thioglycine (internal)","synonyms":[{"name":"1-thioglycine","type":"exact"},{"name":"2-amino-1-sulfanylethanone","type":"exact"},{"name":"Carboxy->Thiocarboxy","type":"related"},{"name":"MOD_RES 1-thioglycine","type":"exact"},{"name":"S(O)Gly","type":"exact"},{"name":"aminoethanethioic O-acid","type":"exact"},{"name":"aminoethanethioic acid","type":"exact"},{"name":"aminoethanethionic acid","type":"exact"},{"name":"aminothioacetic acid","type":"exact"},{"name":"thiocarboxylic acid","type":"related"}],"termid":"MOD:00270"}


id: GO:1990575
data:
  {"annotated_genes":["SJAG_00626","SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94356,104015],"is_not":false,"summary":null,"term":"GO:1990575"}]},"cv_name":"biological_process","definition":"The process in which L-ornithine is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:9237680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ornithine transmembrane transport","termid":"GO:1903352"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_00626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"mitochondrial L-ornithine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000066"],"synonyms":[{"name":"mitochondrial ornithine transmembrane transport","type":"broad"},{"name":"mitochondrial ornithine transport","type":"related"}],"termid":"GO:1990575","terms_by_termid":{"GO:1990575":null}}


id: GO:0090585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + L-ascorbate(out) = protein cysteine + L-ascorbate-6-phosphate(in).","definition_xrefs":["PMID:15153772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003824","GO:0022857","GO:0005215","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein-phosphocysteine-L-ascorbate-phosphotransferase system transporter activity","termid":"GO:0090585"}


id: PBO:0028809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_autophosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028809"}


id: GO:0060389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group on to a pathway restricted SMAD protein. A pathway restricted SMAD protein is an effector protein that acts directly downstream of the transforming growth factor family receptor.","definition_xrefs":["GOC:dph","ISBN:3527303782"],"gene_count":0,"genotype_count":0,"name":"obsolete pathway-restricted SMAD protein phosphorylation (obsolete GO:0060389)","synonyms":[{"name":"R-SMAD protein phosphorylation","type":"exact"},{"name":"pathway restricted SMAD protein phosphorylation","type":"exact"},{"name":"receptor regulated SMAD protein phosphorylation","type":"exact"},{"name":"receptor-regulated SMAD protein phosphorylation","type":"exact"}],"termid":"GO:0060389"}


id: PBO:0110243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex histone fold subunit Php5","termid":"PBO:0110243"}


id: PBO:0087272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase involved in salt tolerance, nutrient response; functions in regulation of Trk1p-Trk2p potassium transporter; overexpression affects the Fe-S and lipoamide containing proteins in the mitochondrion; required for lipoylation of Lat1p, Kgd2p and Gcv3p; partially redundant with Hal5p; has similarity to Npr1p; localizes to the cytoplasm and mitochondrion","termid":"PBO:0087272"}


id: PBO:0032745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B delta subunit","termid":"PBO:0032745"}


id: PBO:0078430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 1-1","termid":"PBO:0078430"}


id: GO:0010757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of plasminogen activation. Plasminogen activation is the process in which plasminogen is processed to plasmin.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasminogen activation","termid":"GO:0010755"},{"relation_name":"is_a","term_name":"negative regulation of protein processing","termid":"GO:0010955"},{"relation_name":"negatively_regulates","term_name":"plasminogen activation","termid":"GO:0031639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"negative regulation of plasminogen activation","synonyms":[{"name":"inhibition of plasminogen activation","type":"narrow"}],"termid":"GO:0010757"}


id: GO:0031271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of a pseudopodium from the lateral area of a cell.","definition_xrefs":["GOC:mah","GOC:dph","GOC:pg","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"lateral pseudopodium assembly","synonyms":[{"name":"lateral pseudopodium formation","type":"related"}],"termid":"GO:0031271"}


id: FYPO:0003118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of reactive oxygen species (ROS) measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular reactive oxygen species level during vegetative growth","synonyms":[{"name":"normal cellular ROS level","type":"exact"},{"name":"normal cellular reactive oxygen species level during mitotic cell cycle","type":"related"},{"name":"normal level of reactive oxygen species in cell","type":"exact"}],"termid":"FYPO:0003118"}


id: PATO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000164 relative temporal (obsolete PATO:0000164)","termid":"PATO:0000164"}


id: PBO:0003116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domains","termid":"PBO:0003116"}


id: GO:0047016
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 7-alpha-hydroxycholesterol = NADH + H+ + 7-alpha-hydroxycholest-4-en-3-one.","definition_xrefs":["MetaCyc:1.1.1.181-RXN","EC:1.1.1.181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase activity","secondary_identifiers":["RHEA:11896"],"synonyms":[{"name":"3-beta-hydroxy-Delta(5)-C(27)-steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid oxidoreductase","type":"broad"},{"name":"cholest-5-ene-3beta,7alpha-diol 3beta-dehydrogenase activity","type":"related"},{"name":"cholest-5-ene-3beta,7alpha-diol:NAD+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047016"}


id: GO:1905887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which (2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol (autoinducer AI-2) is transported across a membrane. AI-2 is produced by prokaryotes and is believed to play a role in quorum sensing.","definition_xrefs":["PMID:15601708","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"autoinducer AI-2 transmembrane transport","synonyms":[{"name":"(2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol transmembrane transport","type":"exact"},{"name":"AI-2 transmembrane transport","type":"exact"},{"name":"autoinducer 2 transmembrane transport","type":"exact"}],"termid":"GO:1905887"}


id: PBO:0052865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-8","termid":"PBO:0052865"}


id: PBO:0049242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulin precursor","termid":"PBO:0049242"}


id: PBO:0028912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_abnormal_septum","termid":"PBO:0028912"}


id: PBO:0060989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-homologous end joining factor 1","termid":"PBO:0060989"}


id: PBO:0065117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C theta","termid":"PBO:0065117"}


id: PBO:0062788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 2","termid":"PBO:0062788"}


id: GO:0014063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of serotonin.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of serotonin secretion","termid":"GO:0014062"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"serotonin secretion","termid":"GO:0001820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of serotonin secretion","synonyms":[{"name":"down regulation of serotonin secretion","type":"exact"},{"name":"down-regulation of serotonin secretion","type":"exact"},{"name":"downregulation of serotonin secretion","type":"exact"},{"name":"inhibition of serotonin secretion","type":"narrow"},{"name":"positive regulation of serotonin release","type":"related"}],"termid":"GO:0014063"}


id: GO:0018756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ammeline + H2O = ammelide + NH3.","definition_xrefs":["PMID:1991731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"ammeline aminohydrolase activity","secondary_identifiers":["MetaCyc:RXN-8016","RHEA:26201"],"termid":"GO:0018756"}


id: GO:0045794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases cell volume.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell volume homeostasis","termid":"GO:0006884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell volume","synonyms":[{"name":"RVD","type":"related"},{"name":"cell regulatory volume decrease","type":"related"}],"termid":"GO:0045794"}


id: MOD:01904
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and an L-threonine residue to form L-serine 5-methyloxazoline-4-carboxylic acid.","definition_xrefs":["PubMed:21568297","PubMed:21950656","RESID:AA0575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Thr)","termid":"MOD:01422"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine 5-methyloxazoline-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-5-methyl-1,3-oxazoline-4-carboxylic acid","type":"exact"},{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-5-methyl-4,5-dihydro-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S)-1-azanyl-2-hydroxyethyl]-5-methyl-4,5-dihydro-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methyloxazoline-4-carboxylic acid (Ser-Thr)","type":"exact"},{"name":"L-serine 5-methyloxazoline-4-carboxylic acid","type":"exact"}],"termid":"MOD:01904"}


id: PBO:0026643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_kinetochore_during_mitotic_spindle_assembly_checkpoint_signaling","termid":"PBO:0026643"}


id: PBO:0080063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32","termid":"PBO:0080063"}


id: GO:0060615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which a bud forms from the mammary placode. A mammary bud is bulb of epithelial cells that is distinct from the surrounding epidermis.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"mammary gland bud morphogenesis","termid":"GO:0060648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland bud formation","termid":"GO:0060615"}


id: GO:1900369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of post-transcriptional gene silencing by RNA.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:22412382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-transcriptional gene silencing","termid":"GO:0060149"},{"relation_name":"is_a","term_name":"negative regulation of gene silencing by regulatory ncRNA","termid":"GO:0060967"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing by regulatory ncRNA","termid":"GO:1900368"},{"relation_name":"negatively_regulates","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-transcriptional gene silencing by regulatory ncRNA","synonyms":[{"name":"down regulation of RNA interference","type":"exact"},{"name":"down regulation of RNAi","type":"exact"},{"name":"down-regulation of RNA interference","type":"exact"},{"name":"down-regulation of RNAi","type":"exact"},{"name":"downregulation of RNA interference","type":"exact"},{"name":"downregulation of RNAi","type":"exact"},{"name":"inhibition of RNA interference","type":"narrow"},{"name":"inhibition of RNAi","type":"exact"},{"name":"negative regulation of PTGS","type":"exact"},{"name":"negative regulation of RNA interference","type":"exact"},{"name":"negative regulation of RNAi","type":"exact"},{"name":"negative regulation of post-transcriptional gene silencing by RNA","type":"related"},{"name":"negative regulation of post-transcriptional gene silencing by ncRNA","type":"related"},{"name":"negative regulation of posttranscriptional gene silencing by siRNA","type":"narrow"}],"termid":"GO:1900369"}


id: GO:1990413
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small pigmented organelle used in single-celled organisms to detect light.","definition_xrefs":["Wikipedia:Eyespot_apparatus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"eyespot apparatus","synonyms":[{"name":"eyespot","type":"related"},{"name":"stigma","type":"related"}],"termid":"GO:1990413"}


id: GO:0170023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific soluble sweet compound has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:24474785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic taste receptor activity","termid":"GO:0170021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"ionotropic sweet taste receptor activity","termid":"GO:0170023"}


id: PBO:0081768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 700","termid":"PBO:0081768"}


id: PBO:0047164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 192 member B, pseudogene","termid":"PBO:0047164"}


id: GO:0016133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of brassinosteroids, any of a group of steroid derivatives that occur at very low concentrations in plant tissues and may have hormone-like effects.","definition_xrefs":["ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytosteroid catabolic process","termid":"GO:0016130"},{"relation_name":"is_a","term_name":"brassinosteroid metabolic process","termid":"GO:0016131"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"brassinosteroid catabolic process","synonyms":[{"name":"brassinosteroid breakdown","type":"exact"},{"name":"brassinosteroid catabolism","type":"exact"},{"name":"brassinosteroid degradation","type":"exact"}],"termid":"GO:0016133"}


id: MOD:02049
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-isoleucine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-isoleucine residue","synonyms":[{"name":"XlnkIle","type":"exact"}],"termid":"MOD:02049"}


id: GO:0072035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell adhesion process in which mesenchyme cells adhere to one another in the initial stages of the formation of the pre-tubular aggregate, the earliest recognizable structure of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"renal vesicle formation","termid":"GO:0072033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"pre-tubular aggregate formation","synonyms":[{"name":"mesenchymal cell condensation involved in renal vesicle formation","type":"exact"},{"name":"nephron epithelium formation","type":"related"}],"termid":"GO:0072035"}


id: MOD:00457
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a succinyl group.","definition_xrefs":["PubMed:12175151","Unimod:64#N-term","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"succinylated residue","termid":"MOD:01029"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent light form (N-term)","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:00457"}


id: PATO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000222 muscle elevation (obsolete PATO:0000222)","termid":"PATO:0000222"}


id: GO:0051119
data:
  {"annotated_genes":["SJAG_03820","SJAG_03608","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005354"},{"annotations":[99101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015149"},{"annotations":[110285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[113302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a sugar from one side of a membrane to the other. A sugar is any member of a class of sweet, water-soluble, crystallizable carbohydrates, which are the monosaccharides and smaller oligosaccharides.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sugar transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8875902","Reactome:R-HSA-428779","Reactome:R-HSA-8876319"],"synonyms":[{"name":"sugar/polyol channel activity","type":"narrow"}],"termid":"GO:0051119","terms_by_termid":{"GO:0005354":null,"GO:0005358":null,"GO:0015149":null,"GO:0140108":null}}


id: GO:0050423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine + 2 O2 = thiamine acetic acid + 2 H2O2.","definition_xrefs":["EC:1.1.3.23","MetaCyc:THIAMIN-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"thiamine oxidase activity","secondary_identifiers":["RHEA:21280"],"synonyms":[{"name":"thiamin dehydrogenase activity","type":"related"},{"name":"thiamin oxidase activity","type":"exact"},{"name":"thiamin:oxygen 5-oxidoreductase activity","type":"related"},{"name":"thiamine dehydrogenase activity","type":"related"},{"name":"thiamine:oxygen 5-oxidoreductase activity","type":"related"}],"termid":"GO:0050423"}


id: GO:0140481
data:
  {"annotated_genes":["SJAG_02457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85430],"is_not":false,"summary":null,"term":"GO:0140481"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + iron-sulfur cluster(in) = ADP + phosphate + iron-sulfur cluster(out).","definition_xrefs":["PMID:31040179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type iron-sulfur cluster transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:3.A.1.210.1"],"synonyms":[{"name":"ATPase-coupled Fe-S cluster transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled iron-sulfur cluster transmembrane transporter activity","type":"related"}],"termid":"GO:0140481","terms_by_termid":{"GO:0140481":null}}


id: GO:0061924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of radial glial scaffolds. The scaffolds are used as a substrate for the radial migration of cells.","definition_xrefs":["PMID:22076441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"regulates","term_name":"formation of radial glial scaffolds","termid":"GO:0021943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation of radial glial scaffolds","synonyms":[{"name":"regulation of Bergmann fiber biosynthesis","type":"related"},{"name":"regulation of Bergmann fiber formation","type":"related"},{"name":"regulation of radial glial scaffold formation","type":"exact"}],"termid":"GO:0061924"}


id: GO:0004082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glyceroyl phosphate = 2,3-bisphospho-D-glycerate.","definition_xrefs":["EC:5.4.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"bisphosphoglycerate mutase activity","secondary_identifiers":["Reactome:R-HSA-6798335","MetaCyc:BISPHOSPHOGLYCERATE-MUTASE-RXN","RHEA:17765"],"synonyms":[{"name":"2,3-bisphosphoglycerate mutase activity","type":"related"},{"name":"2,3-bisphosphoglycerate synthase activity","type":"related"},{"name":"2,3-diphosphoglycerate mutase activity","type":"related"},{"name":"2,3-diphosphoglycerate synthase activity","type":"related"},{"name":"2,3-diphosphoglyceromutase activity","type":"related"},{"name":"3-phospho-D-glycerate 1,2-phosphomutase activity","type":"related"},{"name":"BPGM activity","type":"related"},{"name":"DPGM","type":"related"},{"name":"biphosphoglycerate synthase activity","type":"related"},{"name":"bisphosphoglycerate synthase activity","type":"related"},{"name":"bisphosphoglyceromutase","type":"broad"},{"name":"diphosphoglycerate mutase activity","type":"related"},{"name":"diphosphoglyceric mutase activity","type":"related"},{"name":"diphosphoglyceromutase activity","type":"related"},{"name":"glycerate phosphomutase activity","type":"related"}],"termid":"GO:0004082"}


id: GO:0106430
data:
  {"annotated_genes":["SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94628],"is_not":false,"summary":null,"term":"GO:0106430"}]},"cv_name":"molecular_function","definition":"(S)-dihydroorotate + a quinone = orotate + a quinol.","definition_xrefs":["RHEA:30187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.3.5.2"],"termid":"GO:0106430","terms_by_termid":{"GO:0106430":null}}


id: GO:0034106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["GOC:add","PMID:12905029","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte clearance","synonyms":[{"name":"regulation of RBC clearance","type":"exact"},{"name":"regulation of neocytolysis","type":"narrow"},{"name":"regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034106"}


id: PBO:0004320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf5-like","termid":"PBO:0004320"}


id: PBO:0089052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase family V, transmembrane protein dislocase/calcium transporting ATPase Cta4","termid":"PBO:0089052"}


id: PBO:0000869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase Ggt2","termid":"PBO:0000869"}


id: PBO:0074316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD5 antisense RNA 1","termid":"PBO:0074316"}


id: PBO:0041139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3","termid":"PBO:0041139"}


id: PBO:0013089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease positive effector Dbl8","termid":"PBO:0013089"}


id: SO:0005841
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A snoRNA that specifies the site of 2'-O-ribose methylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"methylation_guide_snoRNA_primary_transcript","termid":"SO:0000580"},{"relation_name":"is_a","term_name":"C_D_box_snoRNA","termid":"SO:0000593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylation_guide_snoRNA","synonyms":[{"name":"methylation guide snoRNA","type":"exact"}],"termid":"SO:0005841"}


id: PBO:0036162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_prophase","termid":"PBO:0036162"}


id: PBO:0071982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 11","termid":"PBO:0071982"}


id: GO:0018801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-glutaconyl-CoA + H+ = but-2-enoyl-CoA + CO2.","definition_xrefs":["RHEA:23972","PMID:11248185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decarboxylation-driven active transmembrane transporter activity","termid":"GO:0015451"},{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glutaconyl-CoA decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03028","MetaCyc:GLUTACONYL-COA-DECARBOXYLASE-RXN","EC:7.2.4.5","UM-BBD_reactionID:r0199"],"synonyms":[{"name":"4-carboxybut-2-enoyl-CoA carboxy-lyase (but-2-enoyl-CoA-forming)","type":"exact"},{"name":"4-carboxybut-2-enoyl-CoA carboxy-lyase activity","type":"related"},{"name":"glutaconyl coenzyme A decarboxylase activity","type":"related"},{"name":"pent-2-enoyl-CoA carboxy-lyase activity","type":"related"}],"termid":"GO:0018801"}


id: PBO:0068209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 516","termid":"PBO:0068209"}


id: GO:0099631
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasmic component of the postsynaptic endocytic zone.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"postsynaptic endocytic zone","termid":"GO:0098843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"postsynaptic endocytic zone cytoplasmic component","termid":"GO:0099631"}


id: GO:0003863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyl-2-oxobutanoate + lipoamide = S-(2-methylpropanoyl)dihydrolipoamide + CO2.","definition_xrefs":["EC:1.2.4.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","termid":"GO:0016624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity","secondary_identifiers":["RHEA:13457","GO:0003826","MetaCyc:1.2.4.4-RXN"],"synonyms":[{"name":"2-oxoisocaproate dehydrogenase activity","type":"related"},{"name":"2-oxoisovalerate (lipoate) dehydrogenase activity","type":"related"},{"name":"3-methyl-2-oxobutanoate dehydrogenase (lipoamide) activity","type":"related"},{"name":"3-methyl-2-oxobutanoate:dihydrolipoyllysine-residue (2-methylpropanoyl)transferase-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-2-methylpropanoylating)","type":"related"},{"name":"3-methyl-2-oxobutanoate:lipoamide oxidoreductase (decarboxylating and acceptor-2-methylpropanoylating) activity","type":"related"},{"name":"BCKDH activity","type":"related"},{"name":"BCOAD activity","type":"related"},{"name":"alpha-keto-alpha-methylvalerate dehydrogenase activity","type":"related"},{"name":"alpha-ketoacid dehydrogenase activity","type":"narrow"},{"name":"alpha-ketoisocaproate dehydrogenase activity","type":"related"},{"name":"alpha-ketoisocaproic dehydrogenase activity","type":"related"},{"name":"alpha-ketoisocaproic-alpha-keto-alpha-methylvaleric dehydrogenase activity","type":"related"},{"name":"alpha-ketoisovalerate dehydrogenase activity","type":"related"},{"name":"alpha-oxoisocaproate dehydrogenase activity","type":"related"},{"name":"branched chain keto acid dehydrogenase activity","type":"related"},{"name":"branched-chain (-2-oxoacid) dehydrogenase (BCD) activity","type":"related"},{"name":"branched-chain 2-keto acid dehydrogenase activity","type":"related"},{"name":"branched-chain 2-oxo acid dehydrogenase activity","type":"related"},{"name":"branched-chain alpha-keto acid dehydrogenase activity","type":"related"},{"name":"branched-chain alpha-oxo acid dehydrogenase activity","type":"related"},{"name":"branched-chain keto acid dehydrogenase activity","type":"related"},{"name":"branched-chain ketoacid dehydrogenase activity","type":"related"},{"name":"dehydrogenase, 2-oxoisovalerate (lipoate) activity","type":"related"},{"name":"dehydrogenase, branched chain alpha-keto acid activity","type":"related"}],"termid":"GO:0003863"}


id: PBO:0036077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stubby_vegetative_cell","termid":"PBO:0036077"}


id: GO:0004102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + choline = acetylcholine + CoA.","definition_xrefs":["RHEA:18821","EC:2.3.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"choline O-acetyltransferase activity","secondary_identifiers":["Reactome:R-HSA-264622","MetaCyc:CHOLINE-O-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R01023"],"synonyms":[{"name":"CHOACTase activity","type":"related"},{"name":"acetyl-CoA:choline O-acetyltransferase activity","type":"related"},{"name":"choline acetylase activity","type":"related"},{"name":"choline acetyltransferase activity","type":"related"}],"termid":"GO:0004102"}


id: GO:0061051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle hypertrophy","termid":"GO:0010613"},{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle tissue growth","termid":"GO:0055023"},{"relation_name":"is_a","term_name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"},{"relation_name":"positively_regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061051"}


id: GO:0032588
data:
  {"annotated_genes":["SJAG_03953","SJAG_05330","SJAG_02168","SJAG_00296","SJAG_02912"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86882,87349,89335,91864,103475],"is_not":false,"summary":null,"term":"GO:0032588"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments that make up the trans-Golgi network.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"trans-Golgi network","termid":"GO:0005802"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_02168":null,"SJAG_02912":null,"SJAG_03953":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005794","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"trans-Golgi network membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi trans face membrane","type":"related"},{"name":"trans Golgi network membrane","type":"exact"}],"termid":"GO:0032588","terms_by_termid":{"GO:0032588":null}}


id: PBO:0050788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3B","termid":"PBO:0050788"}


id: PBO:0072286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 4","termid":"PBO:0072286"}


id: GO:0006779
data:
  {"annotated_genes":["SJAG_03173","SJAG_01841","SJAG_03961","SJAG_01155","SJAG_02896","SJAG_02876","SJAG_04944","SJAG_01786","SJAG_00097","SJAG_01372","SJAG_05283","SJAG_04109","SJAG_03862","SJAG_01192","SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105642,89308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[101288,112744,109990,91906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[91907,87112,66676,90565,88967,92503,113079,88466],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[111531,93931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[92504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["GOC:jl","ISBN:0198506732","Wikipedia:Porphyrin#Natural_formation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"porphyrin-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin anabolism","type":"related"},{"name":"porphyrin biosynthesis","type":"related"},{"name":"porphyrin biosynthetic process","type":"related"},{"name":"porphyrin formation","type":"related"},{"name":"porphyrin synthesis","type":"related"}],"termid":"GO:0006779","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null}}


id: GO:0019032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral glycoprotein (obsolete GO:0019032)","synonyms":[{"name":"viral glycoprotein","type":"exact"}],"termid":"GO:0019032"}


id: PATO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001039 absolute ratio (obsolete PATO:0001039)","termid":"PATO:0001039"}


id: PBO:0087323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP protein component of spliceosomal snRNPs; required for pre-mRNA splicing and snRNP biogenesis; in null mutant newly-synthesized snRNAs are destabilized and 3'-end processing is slowed","termid":"PBO:0087323"}


id: PBO:0039809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF4 antisense RNA 1","termid":"PBO:0039809"}


id: PBO:0059172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin protein zero like 3","termid":"PBO:0059172"}


id: GO:0032538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any behavior associated with finding a host organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"host-seeking behavior","termid":"GO:0032537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of host-seeking behavior","synonyms":[{"name":"regulation of host-seeking behaviour","type":"exact"}],"termid":"GO:0032538"}


id: GO:1901915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"positively_regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of capsule organization","synonyms":[{"name":"activation of capsule organisation","type":"narrow"},{"name":"activation of capsule organization","type":"narrow"},{"name":"activation of capsule organization and biogenesis","type":"related"},{"name":"positive regulation of capsule organisation","type":"exact"},{"name":"positive regulation of capsule organization and biogenesis","type":"related"},{"name":"up regulation of capsule organisation","type":"exact"},{"name":"up regulation of capsule organization","type":"exact"},{"name":"up regulation of capsule organization and biogenesis","type":"related"},{"name":"up-regulation of capsule organisation","type":"exact"},{"name":"up-regulation of capsule organization","type":"exact"},{"name":"up-regulation of capsule organization and biogenesis","type":"related"},{"name":"upregulation of capsule organisation","type":"exact"},{"name":"upregulation of capsule organization","type":"exact"},{"name":"upregulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901915"}


id: FYPO:0005152
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115316],"is_not":false,"summary":null,"term":"FYPO:0005152"}]},"cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caspofungin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to caspofungin","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"resistance to caspofungin during mitotic cell cycle","type":"related"},{"name":"resistance to caspofungin during vegetative growth","type":"exact"},{"name":"resistant to caspofungin","type":"exact"}],"termid":"FYPO:0005152","terms_by_termid":{"FYPO:0005152":null,"FYPO_EXT:0000002":null}}


id: PATO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar EM radiation quality which obtains by the capacity of the bearer to retain radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"full-spectrum EM radiation quality","termid":"PATO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absorption quality","termid":"PATO:0001293"}


id: FYPO:0004068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 5 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal.","definition_xrefs":["GO:0071620","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during vegetative growth","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during mitotic cell cycle","type":"related"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 5 residues during vegetative growth","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0004068"}


id: GO:0086061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of a bundle of His cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated sodium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated sodium channel activity involved in bundle of His cell action potential","synonyms":[{"name":"voltage-gated sodium channel activity involved in bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086061"}


id: PBO:0078485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-5","termid":"PBO:0078485"}


id: GO:1900643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chanoclavine-I biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chanoclavine-I biosynthetic process (obsolete GO:1900643)","synonyms":[{"name":"regulation of chanoclavine-I anabolism","type":"exact"},{"name":"regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"regulation of chanoclavine-I formation","type":"exact"},{"name":"regulation of chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900643"}


id: PBO:0072186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 2","termid":"PBO:0072186"}


id: PBO:0050765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 27","termid":"PBO:0050765"}


id: GO:0080074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a caffeoyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"spermidine:caffeoyl CoA N-acyltransferase activity","termid":"GO:0080074"}


id: PBO:0078249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 25/OR9-2 (pseudogene)","termid":"PBO:0078249"}


id: PBO:0059922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 8","termid":"PBO:0059922"}


id: PBO:0050746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 8","termid":"PBO:0050746"}


id: GO:0070480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs independent of deadenylation, but requires decapping followed by transcript decay.","definition_xrefs":["GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-independent decay (obsolete GO:0070480)","termid":"GO:0070480"}


id: GO:0048462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the carpel. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"carpel morphogenesis","termid":"GO:0048445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carpel formation","secondary_identifiers":["GO:0048431"],"termid":"GO:0048462"}


id: FYECO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ketoconazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ketoconazole","termid":"FYECO:0000350"}


id: GO:2000878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oligopeptide transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of oligopeptide transport","termid":"GO:0090088"},{"relation_name":"positively_regulates","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of oligopeptide transport","termid":"GO:2000878"}


id: GO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aging dependent sterility (sensu Fungi) (obsolete GO:0030464)","synonyms":[{"name":"aging dependent sterility (sensu Fungi)","type":"exact"}],"termid":"GO:0030464"}


id: PBO:0071699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 5","termid":"PBO:0071699"}


id: GO:0010376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the stomatal complex. This process pertains to the initial formation of a structure from unspecified parts. The stomatal complex is the stomatal guard cells and their associated epidermal cells.","definition_xrefs":["PMID:17259259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"stomatal complex morphogenesis","termid":"GO:0010103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal complex formation","termid":"GO:0010376"}


id: FYPO:0004828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to nucleus during mitosis","synonyms":[{"name":"normal protein localisation to nucleus during mitosis","type":"exact"},{"name":"normal protein localization to nucleus during mitosis during vegetative growth","type":"exact"},{"name":"normal protein localization to nucleus during mitotic M phase","type":"related"},{"name":"normal protein localization to nucleus during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004828"}


id: GO:0097061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dendritic spine. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission.","definition_xrefs":["GOC:BHF","PMID:20410104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynapse organization","termid":"GO:0099173"},{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic spine organization","synonyms":[{"name":"dendritic spine organisation","type":"exact"}],"termid":"GO:0097061"}


id: PBO:0011413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_dependent_on","termid":"PBO:0011413"}


id: PBO:0084295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intra-Golgi v-SNARE; required for transport of proteins between an early and a later Golgi compartment","termid":"PBO:0084295"}


id: PBO:0088050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin ligase that modifies and regulates RNA Pol II; involved in a putative alcohol-responsive signaling pathway; accumulates in the nucleus under alcohol stress; has a role in organization of septins and the actin cytoskeleton; contains a Ring/PHD finger domain similar to the mammalian rA9 protein","termid":"PBO:0088050"}


id: PBO:0004926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetra spanning protein 1, Tts1","termid":"PBO:0004926"}


id: GO:0034637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular carbohydrate biosynthetic process (obsolete GO:0034637)","termid":"GO:0034637"}


id: PBO:0055387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2817","termid":"PBO:0055387"}


id: GO:0050798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a T cell population following activation by an antigenic stimulus.","definition_xrefs":["GOC:dph","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated T cell proliferation","synonyms":[{"name":"activated T lymphocyte proliferation","type":"exact"},{"name":"activated T-cell proliferation","type":"exact"},{"name":"activated T-lymphocyte proliferation","type":"exact"},{"name":"proliferation of activated T cells","type":"exact"}],"termid":"GO:0050798"}


id: PATO:0001685
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A magnetic quality inhering in a bearer by virtue of the bearer's ability to exert magnitism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnetism","termid":"PATO:0001682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnetic","termid":"PATO:0001685"}


id: FYPO:0008154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric heterochromatin is normal (i.e. indistinguishable from wild type.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric chromatin","termid":"FYPO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to centromeric heterochromatin","termid":"FYPO:0008154"}


id: GO:1900933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nonadec-1-ene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene metabolic process","termid":"GO:1900932"},{"relation_name":"negatively_regulates","term_name":"nonadec-1-ene metabolic process","termid":"GO:1900876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nonadec-1-ene metabolic process","synonyms":[{"name":"down regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"down regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"down-regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"down-regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"downregulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"downregulation of nonadec-1-ene metabolism","type":"exact"},{"name":"inhibition of nonadec-1-ene metabolic process","type":"narrow"},{"name":"inhibition of nonadec-1-ene metabolism","type":"exact"},{"name":"negative regulation of nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900933"}


id: PBO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.68","termid":"PBO:0002352"}


id: GO:0002888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated immunity","termid":"GO:0002705"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"positively_regulates","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid leukocyte mediated immunity","synonyms":[{"name":"activation of myeloid leukocyte mediated immunity","type":"narrow"},{"name":"stimulation of myeloid leukocyte mediated immunity","type":"narrow"},{"name":"up regulation of myeloid leukocyte mediated immunity","type":"exact"},{"name":"up-regulation of myeloid leukocyte mediated immunity","type":"exact"},{"name":"upregulation of myeloid leukocyte mediated immunity","type":"exact"}],"termid":"GO:0002888"}


id: GO:0004866
data:
  {"annotated_genes":["SJAG_04398","SJAG_01072","SJAG_00460","SJAG_04633"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85566,99401,112933],"is_not":false,"summary":null,"term":"GO:0004866"},{"annotations":[89303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004867"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of an endopeptidase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase inhibitor activity","termid":"GO:0030414"},{"relation_name":"is_a","term_name":"endopeptidase regulator activity","termid":"GO:0061135"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_01072":null,"SJAG_04398":null,"SJAG_04633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0004857","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"endopeptidase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-2 macroglobulin","type":"related"},{"name":"endoproteinase inhibitor","type":"narrow"},{"name":"proteinase inhibitor","type":"narrow"}],"termid":"GO:0004866","terms_by_termid":{"GO:0004866":null,"GO:0004867":null}}


id: PBO:0050364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 67","termid":"PBO:0050364"}


id: PBO:0018210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase inhibitor (predicted)","termid":"PBO:0018210"}


id: PBO:0005121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding involved in ER to Golgi vesicle transport (predicted)","termid":"PBO:0005121"}


id: GO:0043679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters. The axon terminus is considered to be the whole region of thickening and the terminal button is a specialized region of it.","definition_xrefs":["GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection terminus","termid":"GO:0044306"},{"relation_name":"is_a","term_name":"presynapse","termid":"GO:0098793"},{"relation_name":"part_of","term_name":"distal axon","termid":"GO:0150034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon terminus","secondary_identifiers":["NIF_Subcellular:nlx_subcell_20090512"],"synonyms":[{"name":"axon terminal","type":"exact"},{"name":"axon terminal specialization","type":"related"},{"name":"nerve ending","type":"exact"}],"termid":"GO:0043679"}


id: PBO:0029012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029012"}


id: PBO:0036317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human C12orf45 ortholog, domain architectures indicate a possible role in translation","termid":"PBO:0036317"}


id: PBO:0043438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondromodulin","termid":"PBO:0043438"}


id: PBO:0090712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase SIN pathway Cdc7","termid":"PBO:0090712"}


id: PBO:0029065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_riboflavin_binding","termid":"PBO:0029065"}


id: PBO:0028834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_homologous_chromosome_pairing_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028834"}


id: FYPO:0005346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is abolished, and the protein is instead present in the nucleus, during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:9635190","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to cytoplasm, with protein mislocalized to nucleus during mitotic interphase","synonyms":[{"name":"abolished protein localisation to cytoplasm, with protein mislocalised to nucleus during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cytoplasm, with protein mislocalized to nucleus during interphase during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cytoplasm, with protein mislocalized to nucleus during mitotic interphase during vegetative growth","type":"exact"},{"name":"protein localization to cytoplasm abolished, with protein mislocalized to nucleus during mitotic interphase","type":"exact"}],"termid":"FYPO:0005346"}


id: PBO:0072015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 1","termid":"PBO:0072015"}


id: PBO:0077498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 217","termid":"PBO:0077498"}


id: GO:0070848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to growth factor","synonyms":[{"name":"response to growth factor stimulus","type":"exact"}],"termid":"GO:0070848"}


id: GO:1905224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form a clathrin-coated pit.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","PMID:26589353","GO_REF:0000079"],"gene_count":0,"genotype_count":0,"name":"obsolete clathrin-coated pit assembly (obsolete GO:1905224)","synonyms":[{"name":"clathrin-coated pit formation","type":"exact"},{"name":"coated pit assembly","type":"exact"},{"name":"coated pit formation","type":"exact"}],"termid":"GO:1905224"}


id: PBO:0012289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LAMTOR2 ortholog","termid":"PBO:0012289"}


id: PBO:0056486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATR3 pseudogene 3","termid":"PBO:0056486"}


id: GO:0072288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric proximal tubule are generated and organized. The metanephric proximal tubule is a metanephric nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle in the metanephros. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"},{"relation_name":"is_a","term_name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"},{"relation_name":"part_of","term_name":"metanephric proximal tubule development","termid":"GO:0072237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal tubule morphogenesis","termid":"GO:0072288"}


id: GO:1904927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a palmitoleic acid stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mr","GO_REF:0000071","PMID:25429233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"response to palmitoleic acid","termid":"GO:1904926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to palmitoleic acid","termid":"GO:1904927"}


id: PBO:0081956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida glycoprotein 3","termid":"PBO:0081956"}


id: GO:0007134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows anaphase I of meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telophase","termid":"GO:0051326"},{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic telophase I","termid":"GO:0007134"}


id: GO:0005665
data:
  {"annotated_genes":["SJAG_04261","SJAG_02101","SJAG_02506","SJAG_01436","SJAG_04894","SJAG_04030","SJAG_00119","SJAG_00458","SJAG_04559","SJAG_01765","SJAG_02070","SJAG_01713","SJAG_01313"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88154,90029,90220,92942,97120,97892,99458,101889,103803,105381,108956,109910,110771],"is_not":false,"summary":null,"term":"GO:0005665"}]},"cv_name":"cellular_component","definition":"RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.","definition_xrefs":["GOC:krc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00458":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02506":null,"SJAG_04030":null,"SJAG_04261":null,"SJAG_04559":null,"SJAG_04894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase II, core complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase II, core complex","type":"exact"},{"name":"RNA polymerase II complex","type":"broad"},{"name":"RNAP II complex","type":"broad"}],"termid":"GO:0005665","terms_by_termid":{"GO:0005665":null}}


id: PBO:0034084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-expressed_in","termid":"PBO:0034084"}


id: PBO:0063981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 15","termid":"PBO:0063981"}


id: GO:0102417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: apigenin 7-O-beta-D-glucoside + UDP-alpha-D-glucose = apigenin-7-O-gentiobioside + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"apigenin-7-O-glucoside 1,6-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13800"],"termid":"GO:0102417"}


id: PBO:0041882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 1","termid":"PBO:0041882"}


id: GO:0009203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleoside triphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate catabolic process","termid":"GO:0009143"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate metabolic process","termid":"GO:0009199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ribonucleoside triphosphate catabolic process","synonyms":[{"name":"ribonucleoside triphosphate breakdown","type":"exact"},{"name":"ribonucleoside triphosphate catabolism","type":"exact"},{"name":"ribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009203"}


id: PBO:0003095
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.44","termid":"PBO:0003095"}


id: GO:1901564
data:
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id: PBO:0027086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_midzone_during_anaphase","termid":"PBO:0027086"}


id: GO:0010004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A complex and coordinated series of cellular movements, including germ band extension, that occurs at the end of cleavage during embryonic development. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrulation with mouth forming first","termid":"GO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation involving germ band extension","termid":"GO:0010004"}


id: FYPO:0003269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more microtubules does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to microtubule during vegetative growth","synonyms":[{"name":"abolished protein localisation to microtubule during vegetative growth","type":"exact"},{"name":"abolished protein localization to microtubule during mitotic cell cycle","type":"related"},{"name":"protein absent from microtubule","type":"related"},{"name":"protein localization to microtubule abolished","type":"exact"}],"termid":"FYPO:0003269"}


id: MOD:00118
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-histidine residue by a thioether bond to form 2'-(S-L-cysteinyl)-L-histidine.","definition_xrefs":["RESID:AA0109","PubMed:6210696","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-(S-L-cysteinyl)-L-histidine","synonyms":[{"name":"(2R)-2-amino-3-[(4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-2-yl)sulfanyl]propanoic acid","type":"exact"},{"name":"(2S)-2-amino-3-[2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-1H-imidazol-4-yl]propanoic acid","type":"exact"},{"name":"2'-(L-cystein-S-yl)-L-histidine","type":"exact"},{"name":"CROSSLNK 2'-(S-cysteinyl)-histidine (Cys-His)","type":"exact"},{"name":"S-(2'-histidyl)cysteine","type":"exact"},{"name":"S-(2-histidyl)- (crosslinked to cysteine)","type":"exact"},{"name":"XLNK-SCys-2'His","type":"exact"}],"termid":"MOD:00118"}


id: GO:0016558
data:
  {"annotated_genes":["SJAG_01165","SJAG_00891","SJAG_02034","SJAG_02693","SJAG_00702","SJAG_02619","SJAG_03324","SJAG_05315","SJAG_03440","SJAG_01854","SJAG_02997","SJAG_00326","SJAG_02797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62858,86378,86581,92602,94363,101338,106157,107497],"is_not":false,"summary":null,"term":"GO:0016558"},{"annotations":[93090,99209,107961],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[113398,97421],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"}]},"cv_name":"biological_process","definition":"The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported. The cargo protein is then released into the peroxisome matrix.","definition_xrefs":["PMID:11687502","ISBN:0716731363","PMID:11988772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal membrane transport","termid":"GO:0015919"},{"relation_name":"is_a","term_name":"protein transmembrane import into intracellular organelle","termid":"GO:0044743"},{"relation_name":"is_a","term_name":"intracellular protein transmembrane transport","termid":"GO:0065002"},{"relation_name":"is_a","term_name":"establishment of protein localization to peroxisome","termid":"GO:0072663"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_01854":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179","GO:0007031"],"is_obsolete":false,"name":"protein import into peroxisome matrix","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"peroxisome matrix protein import","type":"exact"},{"name":"protein transport to peroxisome matrix","type":"exact"}],"termid":"GO:0016558","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null}}


id: GO:0015324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of peptide-acetyl-CoA from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide-acetyl-CoA secondary active transmembrane transporter activity (obsolete GO:0015324)","synonyms":[{"name":"peptide-acetyl-CoA transporter activity","type":"related"}],"termid":"GO:0015324"}


id: FYPO:0002827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased chromatin silencing at silent mating-type cassette","synonyms":[{"name":"decreased chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"decreased chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"reduced chromatin silencing at silent mating-type cassette","type":"exact"}],"termid":"FYPO:0002827"}


id: SO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Y RNAs are components of the Ro ribonucleoprotein particle (Ro RNP), in association with Ro60 and La proteins. The Y RNAs and Ro60 and La proteins are well conserved, but the function of the Ro RNP is not known. In humans the RNA component can be one of four small RNAs: hY1, hY3, hY4 and hY5. These small RNAs are predicted to fold into a conserved secondary structure containing three stem structures. The largest of the four, hY1, contains an additional hairpin.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Y_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:Y_RNA","type":"exact"},{"name":"Y RNA","type":"exact"}],"termid":"SO:0000405"}


id: GO:0047474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acid + ATP + L-cysteinyl-[protein] = AMP + diphosphate + S-(long-chain fatty acyl)-L-cysteinyl-[protein]. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["MetaCyc:6.2.1.19-RXN","EC:6.2.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid ligase activity","termid":"GO:0015645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty acid--protein ligase activity","secondary_identifiers":["RHEA:20101"],"synonyms":[{"name":"acyl-protein synthetase activity","type":"related"},{"name":"long-chain fatty acid luciferin component ligase activity","type":"exact"},{"name":"long-chain-fatty-acid luciferin component ligase activity","type":"exact"},{"name":"long-chain-fatty-acid-luciferin-component ligase activity","type":"exact"},{"name":"long-chain-fatty-acid:protein ligase (AMP-forming)","type":"related"}],"termid":"GO:0047474"}


id: PBO:0027692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology,_indistinct_DNA","termid":"PBO:0027692"}


id: PBO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Lsb6 (predicted)","termid":"PBO:0001119"}


id: PBO:0075228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 3 pseudogene 1 Y-linked","termid":"PBO:0075228"}


id: PBO:0078582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 55","termid":"PBO:0078582"}


id: GO:0071756
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circulating form of IgM consisting of a pentamer of IgM core units with a single J chain polypeptide.","definition_xrefs":["PMID:20176268","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM immunoglobulin complex, circulating","termid":"GO:0071754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"pentameric IgM immunoglobulin complex","synonyms":[{"name":"pentameric IgM antibody","type":"exact"}],"termid":"GO:0071756"}


id: PR:P0CT58
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2201 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S22-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.04c","synonyms":[{"name":"Spom972h-rps2201","type":"exact"}],"termid":"PR:P0CT58"}


id: PBO:0047051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM111A divergent transcript","termid":"PBO:0047051"}


id: MOD:00379
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-serine microcin E492 siderophore ester.","definition_xrefs":["PubMed:15102848","RESID:AA0374","Unimod:448#C-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine microcin E492 siderophore ester","synonyms":[{"name":"L-serine microcin E492 siderophore ester","type":"exact"},{"name":"MOD_RES Serine microcin E492 siderophore ester","type":"exact"},{"name":"Microcin","type":"related"},{"name":"N-[5-(6-O-seryl-beta-glucosyl)-2,3-dihydroxybenzoyl]-O-[N-(2,3-dihydroxybenzoyl)-O-[N-(2,3-dihydroxybenzoyl)seryl]seryl]serine","type":"exact"},{"name":"microcin E492 siderophore ester from serine","type":"related"}],"termid":"MOD:00379"}


id: PBO:0074707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 73A","termid":"PBO:0074707"}


id: GO:0042619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly-hydroxybutyrate (PHB), a polymer of beta-hydroxybutyrate and a common storage material of prokaryotic cells.","definition_xrefs":["PMID:18640095","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-hydroxybutyrate metabolic process","termid":"GO:0042618"},{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) biosynthetic process","termid":"GO:1901441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly-hydroxybutyrate biosynthetic process","synonyms":[{"name":"PHB biosynthesis","type":"exact"},{"name":"PHB biosynthetic process","type":"exact"},{"name":"poly-hydroxybutyrate anabolism","type":"exact"},{"name":"poly-hydroxybutyrate biosynthesis","type":"exact"},{"name":"poly-hydroxybutyrate formation","type":"exact"},{"name":"poly-hydroxybutyrate synthesis","type":"exact"}],"termid":"GO:0042619"}


id: PBO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Sck1","termid":"PBO:0001534"}


id: GO:0048100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the wing disc, a precursor to the wing.","definition_xrefs":["GOC:jid","PMID:10625531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"},{"relation_name":"is_a","term_name":"wing disc pattern formation","termid":"GO:0035222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc anterior/posterior pattern formation","termid":"GO:0048100"}


id: PBO:0051566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 13","termid":"PBO:0051566"}


id: GO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the labyrinthine layer of the placenta.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"labyrinthine layer morphogenesis","termid":"GO:0060713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labyrinthine layer formation","termid":"GO:0060714"}


id: GO:0018764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-isopropylammelide + H2O = cyanuric acid + isopropylamine.","definition_xrefs":["EC:3.5.4.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"N-isopropylammelide isopropylaminohydrolase activity","secondary_identifiers":["RHEA:23608","UM-BBD_enzymeID:e0086","MetaCyc:R123-RXN"],"synonyms":[{"name":"AtzC","type":"related"}],"termid":"GO:0018764"}


id: GO:0033862
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111678],"is_not":false,"summary":null,"term":"GO:0033862"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UMP = ADP + UDP.","definition_xrefs":["EC:2.7.4.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP/dUMP kinase activity","termid":"GO:0009041"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"UMP kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.4.14","RHEA:24400","MetaCyc:2.7.4.22-RXN"],"synonyms":[{"name":"ATP:UMP phosphotransferase activity","type":"related"},{"name":"PyrH","type":"related"},{"name":"SmbA","type":"related"},{"name":"UMP-kinase activity","type":"related"},{"name":"UMPK","type":"related"},{"name":"uridine monophosphate kinase activity","type":"related"}],"termid":"GO:0033862","terms_by_termid":{"GO:0033862":null}}


id: PBO:0052939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 23-1","termid":"PBO:0052939"}


id: GO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of an immature B cell.","definition_xrefs":["ISBN:0781735149","GOC:jal","PMID:16551251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature B cell differentiation","synonyms":[{"name":"immature B cell development","type":"related"},{"name":"immature B lymphocyte differentiation","type":"exact"},{"name":"immature B-cell differentiation","type":"exact"},{"name":"immature B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002327"}


id: PBO:0060829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN3 antisense RNA 1","termid":"PBO:0060829"}


id: GO:0005027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete NGF/TNF (6 C-domain) receptor activity (obsolete GO:0005027)","synonyms":[{"name":"NGF/TNF (6 C-domain) receptor activity","type":"exact"}],"termid":"GO:0005027"}


id: GO:0033225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of 2-aminoethylphosphonate from one side of a membrane to the other by catalysis of the reaction: ATP + H2O + 2-aminoethylphosphonate(out) = ADP + phosphate + 2-aminoethylphosphonate(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled 2-aminoethylphosphonate transporter activity","secondary_identifiers":["GO:0033224","RHEA:32775"],"synonyms":[{"name":"2-aminoethylphosphonate transmembrane transporter activity","type":"related"},{"name":"2-aminoethylphosphonate transporting ATPase activity","type":"related"},{"name":"2-aminoethylphosphonate-transporting ATPase activity","type":"exact"},{"name":"2-phosphonoethylamine transmembrane transporter activity","type":"related"},{"name":"2-phosphonoethylamine transporting ATPase activity","type":"exact"},{"name":"ATP-dependent 2-aminoethylphosphonate transporter activity","type":"exact"},{"name":"ciliatine transporter activity","type":"related"},{"name":"ciliatine transportingATPase activity","type":"exact"}],"termid":"GO:0033225"}


id: GO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle).","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth","termid":"GO:0001545"}


id: FYPO:0000624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which any process of negative regulation of transcription is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abnormal negative regulation of transcription during vegetative growth","synonyms":[{"name":"abnormal down regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal down regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal down-regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal down-regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal downregulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal downregulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal inhibition of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal inhibition of transcription, DNA-dependent, during vegetative growth","type":"narrow"},{"name":"abnormal negative regulation of cellular transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal negative regulation of transcription during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"}],"termid":"FYPO:0000624"}


id: SO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 2KB 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upstream_gene_variant","termid":"SO:0001631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2KB_upstream_variant","synonyms":[{"name":"2KB upstream variant","type":"exact"},{"name":"near-gene-5","type":"exact"}],"termid":"SO:0001636"}


id: GO:0005664
data:
  {"annotated_genes":["SJAG_02394","SJAG_05301","SJAG_01267","SJAG_03927","SJAG_03451","SJAG_02800"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93458,93459,103939,103940,104153,104154,107487,107488,107746,107747,109286,109287],"is_not":false,"summary":null,"term":"GO:0005664"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that is located at the replication origins of a chromosome in the nucleus.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin recognition complex","termid":"GO:0000808"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01267":null,"SJAG_02394":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nuclear origin of replication recognition complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eukaryotic ORC","type":"exact"},{"name":"nuclear ORC","type":"exact"}],"termid":"GO:0005664","terms_by_termid":{"GO:0005664":null}}


id: GO:0043621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a domain within the same polypeptide.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein self-association (obsolete GO:0043621)","synonyms":[{"name":"intramolecular protein binding","type":"exact"},{"name":"protein self association","type":"exact"},{"name":"protein self binding","type":"exact"}],"termid":"GO:0043621"}


id: SO:0000686
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal translocation whereby the chromosomes carrying non-homologous centromeres may be recovered independently. These chromosomes are described as translocation elements. This occurs for some translocations, particularly but not exclusively, reciprocal translocations.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation_element","synonyms":[{"name":"translocation element","type":"exact"}],"termid":"SO:0000686"}


id: PBO:0005261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication checkpoint kinase Cds1","termid":"PBO:0005261"}


id: FYPO:0002711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the haploid nuclei formed by meiotic nuclear division do not separate normally. Nuclei may be closer together than normal, or remain attached by an incompletely separated outer nuclear membrane, or both.","definition_xrefs":["PomBase:mah","PMID:1417417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000121","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal nuclear separation after meiosis","synonyms":[{"name":"abnormal nuclear distribution after meiosis","type":"exact"},{"name":"abnormal nuclear separation after meiotic nuclear division","type":"exact"},{"name":"abnormal nuclear separation during sporulation","type":"related"},{"name":"abnormal nuclear separation in ascus","type":"exact"},{"name":"abnormal separation of nuclei in ascus","type":"exact"}],"termid":"FYPO:0002711"}


id: PBO:0064668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 3","termid":"PBO:0064668"}


id: GO:0017162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an aryl hydrocarbon receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"aryl hydrocarbon receptor binding","termid":"GO:0017162"}


id: GO:0052894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: norspermine + oxygen + H2O = norspermidine + 3-aminopropanal + hydrogen peroxide.","definition_xrefs":["MetaCyc:RXN-10464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"norspermine:oxygen oxidoreductase activity","secondary_identifiers":["RHEA:25816","EC:1.5.3.16"],"synonyms":[{"name":"norspermine oxidase activity","type":"broad"}],"termid":"GO:0052894"}


id: PBO:0029476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shortened_telomeres","termid":"PBO:0029476"}


id: PBO:0080324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 88 pseudogene","termid":"PBO:0080324"}


id: GO:1901357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-D-galactofuranose.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose catabolic process","termid":"GO:0019388"},{"relation_name":"is_a","term_name":"beta-D-galactofuranose metabolic process","termid":"GO:1901356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"beta-D-galactofuranose catabolic process","synonyms":[{"name":"beta-D-galactofuranose breakdown","type":"exact"},{"name":"beta-D-galactofuranose catabolism","type":"exact"},{"name":"beta-D-galactofuranose degradation","type":"exact"}],"termid":"GO:1901357"}


id: PBO:0048041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSIP2 antisense RNA 2","termid":"PBO:0048041"}


id: PBO:0040705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 11","termid":"PBO:0040705"}


id: GO:1905283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epidermal growth factor receptor signaling pathway involved in heart process.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie","GOC:bc","PMID:23069713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905282"},{"relation_name":"negatively_regulates","term_name":"epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"down regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"down regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"down regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"down-regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"down-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"downregulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"downregulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"downregulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"downregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"inhibition of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of EGF receptor signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"inhibition of EGF receptor signalling pathway involved in heart process","type":"narrow"},{"name":"inhibition of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of EGFR signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of ERBB1 signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of epidermal growth factor receptor signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"inhibition of epidermal growth factor receptor signalling pathway involved in heart process","type":"narrow"},{"name":"inhibition of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"narrow"},{"name":"negative regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905283"}


id: PBO:0085182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of three alternate beta-subunits of the Snf1 kinase complex; allows nuclear localization of the Snf1 kinase complex in the presence of a nonfermentable carbon source; necessary and sufficient for phosphorylation of the Mig2p transcription factor in response to alkaline stress; functionally redundant with SIP1 and SIP2 for the phosphorylation of Mig1p in response to glucose deprivation; contains a glycogen-binding domain","termid":"PBO:0085182"}


id: GO:0086016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in an atrioventricular node cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"},{"relation_name":"part_of","term_name":"AV node cell to bundle of His cell signaling","termid":"GO:0086027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"AV node cell action potential","synonyms":[{"name":"AV node cardiac muscle cell action potential","type":"exact"},{"name":"atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086016"}


id: PR:O94752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An enhancer of mRNA-decapping protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13612:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of mRNA-decapping protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.11c","secondary_identifiers":["UniProtKB:O94752"],"synonyms":[{"name":"SPBC18E5.11c","type":"related"},{"name":"Spom972h-EDC3","type":"exact"}],"termid":"PR:O94752"}


id: GO:1990472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dual-strand piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs) where piRNAs originate from both DNA strands via noncanonical transcription.","definition_xrefs":["GOC:bhm","PMID:24906153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA cluster binding","termid":"GO:1990470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"piRNA dual-strand cluster binding","termid":"GO:1990472"}


id: SO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short hairpin RNA (shRNA) is an RNA transcript that makes a tight hairpin turn that can be used to silence target gene expression via RNA interference.","definition_xrefs":["PMID:6699500","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shRNA","secondary_identifiers":["http:http\\:en.wikipedia.org/wiki/Small_hairpin_RNA"],"synonyms":[{"name":"short hairpin RNA","type":"exact"},{"name":"small hairpin RNA","type":"exact"}],"termid":"SO:0002031"}


id: GO:0033447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"AGA codon-amino acid adaptor activity","synonyms":[{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033447"}


id: PBO:0017853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Aat1","termid":"PBO:0017853"}


id: PBO:0071873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 11","termid":"PBO:0071873"}


id: PBO:0046767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 7","termid":"PBO:0046767"}


id: PBO:0073326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 2 (gene/pseudogene)","termid":"PBO:0073326"}


id: PR:G2TRR0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC336.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C336.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.16","synonyms":[{"name":"Spom972h-SPBC336.16","type":"exact"}],"termid":"PR:G2TRR0"}


id: GO:0039536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the RIG-I signaling pathway.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of RIG-I signaling pathway","termid":"GO:0039535"},{"relation_name":"negatively_regulates","term_name":"RIG-I signaling pathway","termid":"GO:0039529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of RIG-I signaling pathway","synonyms":[{"name":"negative regulation of DDX58 signaling pathway","type":"exact"},{"name":"negative regulation of RIG-I signalling pathway","type":"exact"},{"name":"negative regulation of retinoic acid inducible gene I signaling pathway","type":"exact"}],"termid":"GO:0039536"}


id: GO:0035480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to heart induction.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Notch signaling pathway involved in heart induction (obsolete GO:0035480)","synonyms":[{"name":"regulation of Notch signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0035480"}


id: PBO:0089594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp4","termid":"PBO:0089594"}


id: PBO:0004564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein Sog2 (predicted)","termid":"PBO:0004564"}


id: SO:0001199
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ss_RNA_viral_sequence is a viral_sequence that is the sequence of a virus that exists as single stranded RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ss_RNA_viral_sequence","synonyms":[{"name":"single strand RNA virus","type":"exact"},{"name":"ss RNA viral sequence","type":"exact"}],"termid":"SO:0001199"}


id: GO:0031227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the endoplasmic reticulum membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of endoplasmic reticulum membrane (obsolete GO:0031227)","synonyms":[{"name":"intrinsic to endoplasmic reticulum membrane","type":"narrow"}],"termid":"GO:0031227"}


id: PBO:0074499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptosome associated protein 47","termid":"PBO:0074499"}


id: PBO:0075270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 23","termid":"PBO:0075270"}


id: PBO:0039231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT interacting protein","termid":"PBO:0039231"}


id: GO:1901612
data:
  {"annotated_genes":["SJAG_03563","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102310,102699],"is_not":false,"summary":null,"term":"GO:1901612"}]},"cv_name":"molecular_function","definition":"Binding to cardiolipin.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol binding","termid":"GO:1901611"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cardiolipin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901612","terms_by_termid":{"GO:1901612":null}}


id: PBO:0074553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 6","termid":"PBO:0074553"}


id: FYPO:0001154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of methylamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular methylamine level","synonyms":[{"name":"increased cellular methylamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular methylamine level during vegetative growth","type":"exact"},{"name":"increased methylamine accumulation","type":"related"}],"termid":"FYPO:0001154"}


id: PBO:0090977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway protein Sec39","termid":"PBO:0090977"}


id: PBO:0056888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake family member 3","termid":"PBO:0056888"}


id: GO:0008389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coumarin + O2 + NADPH + H+ = hydroxycoumarin + H2O + NADP+.","definition_xrefs":["PMID:10490589","PMID:2733794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"coumarin 7-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-211881","Reactome:R-HSA-76453"],"synonyms":[{"name":"cytochrome P450 CYP2A5","type":"narrow"}],"termid":"GO:0008389"}


id: PBO:0052482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 8A","termid":"PBO:0052482"}


id: PBO:0078240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 21-1 (pseudogene)","termid":"PBO:0078240"}


id: FYPO:0004933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore membrane formation is increased.","definition_xrefs":["PomBase:mah","PMID:20410137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"increased prospore membrane formation","synonyms":[{"name":"increased ascospore-type prospore membrane assembly","type":"exact"},{"name":"increased forespore membrane formation","type":"exact"}],"termid":"FYPO:0004933"}


id: PBO:0075848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssu-2 homolog","termid":"PBO:0075848"}


id: PBO:0031765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_glycerol/ethanol_carbon_source","termid":"PBO:0031765"}


id: PBO:0069532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 801, pseudogene","termid":"PBO:0069532"}


id: PBO:0070916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 24","termid":"PBO:0070916"}


id: PBO:0041966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 9","termid":"PBO:0041966"}


id: PBO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.31","termid":"PBO:0005241"}


id: MOD:01125
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dThymidinyl","termid":"MOD:01125"}


id: PBO:0084710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane citrate transporter; member of the mitochondrial carrier family","termid":"PBO:0084710"}


id: GO:2000463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that enhances the establishment or increases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:BHF","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"positively_regulates","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of excitatory postsynaptic potential","synonyms":[{"name":"positive regulation of EPSP","type":"related"},{"name":"positive regulation of excitatory post-synaptic membrane potential","type":"exact"}],"termid":"GO:2000463"}


id: PBO:0068318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 19A, RBR E3 ubiquitin protein ligase","termid":"PBO:0068318"}


id: PBO:0017468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-formed_as_result_of","termid":"PBO:0017468"}


id: PBO:0046412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectopic P-granules 5 autophagy tethering factor","termid":"PBO:0046412"}


id: FYPO:0000093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to an arsenic-containing substance. Cells stop growing (and may die) at a concentration of arsenic that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to arsenic","synonyms":[{"name":"hypersensitive to arsenic","type":"exact"},{"name":"sensitive to arsenic during mitotic cell cycle","type":"related"},{"name":"sensitive to arsenic during vegetative growth","type":"exact"},{"name":"sensitive to arsenic molecular entity","type":"exact"},{"name":"sensitive to arsenic-containing substance","type":"exact"}],"termid":"FYPO:0000093"}


id: GO:0150129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-33 production.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-33 production","termid":"GO:0150127"},{"relation_name":"positively_regulates","term_name":"interleukin-33 production","termid":"GO:0072639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-33 production","secondary_identifiers":["GO:0150125","GO:0150132"],"synonyms":[{"name":"positive regulation of interleukin-33 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-33 secretion","type":"narrow"}],"termid":"GO:0150129"}


id: GO:0120337
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the radial spoke 2 that is orthogonal to the elongated stalk and which projects towards the central pair of microtubules within the ciliary axoneme.","definition_xrefs":["PMID:22754630","PMID:348711799","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke head","termid":"GO:0001535"},{"relation_name":"part_of","term_name":"radial spoke 2","termid":"GO:0120334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"radial spoke head 2","synonyms":[{"name":"radial spokehead 2","type":"exact"}],"termid":"GO:0120337"}


id: PBO:0084918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Molecular chaperone involved in protein folding in ER; mutation causes defects in cell wall synthesis and lysis of autophagic bodies, suppresses tor2 mutations, and is synthetically lethal with kar2-1 and with rot2 mutations; involved in N-linked glycosylation and O-mannosylation; transmembrane helix Ser250 is essential for Rot1p to interact with other membrane components and exert its functional role, avoiding exposure of Ser H-bonding group at lipid-exposed surface","termid":"PBO:0084918"}


id: PR:Q9HDT9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDT9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0768 protein PB2B2.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.18","synonyms":[{"name":"Spom972h-SPBPB2B2.18","type":"exact"}],"termid":"PR:Q9HDT9"}


id: GO:0016343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The direct or indirect linkage of cytoskeletal filaments to the plasma membrane.","definition_xrefs":["ISBN:0198599323"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal anchoring activity (obsolete GO:0016343)","synonyms":[{"name":"cytoskeletal anchoring activity","type":"exact"}],"termid":"GO:0016343"}


id: GO:0052687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-isopropenyl-6-oxoheptanoate + CoA-SH + ATP = H2O + ADP + phosphate + (3R)-3-isopropenyl-6-oxoheptanoyl-CoA.","definition_xrefs":["KEGG_REACTION:R06396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(3R)-3-isopropenyl-6-oxoheptanoate:CoA ligase (ADP-forming) activity","synonyms":[{"name":"3-isopropenyl-6-oxoheptanoyl-CoA synthetase activity","type":"broad"}],"termid":"GO:0052687"}


id: FYECO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at standard temperature (in the range around 25-32 degrees Celsius) followed by growth at a high temperature (above 32 degrees Celsius).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, standard to high","termid":"FYECO:0000300"}


id: GO:0009439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanate, NCO-, the anion of cyanic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cyanate metabolic process","secondary_identifiers":["MetaCyc:CYANCAT-PWY"],"synonyms":[{"name":"cyanate metabolism","type":"exact"}],"termid":"GO:0009439"}


id: PBO:0058520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5708","termid":"PBO:0058520"}


id: PBO:0065512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline-serine-threonine phosphatase interacting protein 2","termid":"PBO:0065512"}


id: GO:0030521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by an androgen binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"androgen receptor signaling pathway","synonyms":[{"name":"androgen receptor signalling pathway","type":"exact"},{"name":"nuclear-receptor-mediated androgen receptor signaling pathway","type":"exact"}],"termid":"GO:0030521"}


id: PBO:0041347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 80","termid":"PBO:0041347"}


id: PBO:0074994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-5","termid":"PBO:0074994"}


id: GO:0071704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance metabolic process (obsolete GO:0071704)","synonyms":[{"name":"organic molecular entity metabolic process","type":"exact"},{"name":"organic molecular entity metabolism","type":"exact"},{"name":"organic substance metabolism","type":"exact"}],"termid":"GO:0071704"}


id: PBO:0086550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YEL028W is not an essential gene","termid":"PBO:0086550"}


id: PBO:0002834
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA Elimiation Defective","termid":"PBO:0002834"}


id: PR:Q9UUH4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg25 gene.","definition_xrefs":["UniProtKB:Q9UUH4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylsterol monooxygenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.08c","synonyms":[{"name":"C-4 methylsterol oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-erg25","type":"exact"}],"termid":"PR:Q9UUH4"}


id: FYPO:0007779
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115192],"is_not":false,"summary":null,"term":"FYPO:0007779"}],"single_locus_phenotype":[{"annotations":[115183,115320],"is_not":false,"summary":null,"term":"FYPO:0007779"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the mycelium formed by fission yeast undergoing hyphal growth covers a larger area than normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_01787":null,"SJAG_02592":null},"genotype_count":3,"genotypes_by_uniquename":{"SJAG_00124delta__sty1delta":{"display_name":"SJAG_00124delta sty1delta","display_uniquename":"SJAG_00124delta__sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00124:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0007773"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00124","SJAG_02592"],"name":"increased mycelial expansion","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta","sty1delta"],"termid":"FYPO:0007779","terms_by_termid":{"FYPO:0007779":null,"FYPO_EXT:0000002":null}}


id: PBO:0017700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein Spa2","termid":"PBO:0017700"}


id: GO:0047837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylose + NADP+ = D-xylono-1,5-lactone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.179","RHEA:22000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-xylose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R01430","MetaCyc:D-XYLOSE-1-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"D-xylose (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"},{"name":"D-xylose-NADP dehydrogenase activity","type":"related"},{"name":"D-xylose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"D-xylose:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047837"}


id: PBO:0048516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial cell derived neurotrophic factor","termid":"PBO:0048516"}


id: GO:1905324
data:
  {"annotated_genes":["SJAG_01378","SJAG_03685","SJAG_00939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95839,104229,112052],"is_not":false,"summary":null,"term":"GO:1905324"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a telomere-telomerase complex.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:26305931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"telomere organization","termid":"GO:0032200"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01378":null,"SJAG_03685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0032200","GO:0044085"],"is_obsolete":false,"name":"telomere-telomerase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"telomere-telomerase complex formation","type":"exact"}],"termid":"GO:1905324","terms_by_termid":{"GO:1905324":null}}


id: PBO:0089630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-X ortholog, FANCM-MHF complex subunit Mhf2","termid":"PBO:0089630"}


id: PR:O74500
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup60 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup60 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.13c","synonyms":[{"name":"Spom972h-nup60","type":"exact"},{"name":"nuclear pore protein nup60 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74500"}


id: PBO:0091555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein alpha subunit EtfA","termid":"PBO:0091555"}


id: PBO:0062322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 4","termid":"PBO:0062322"}


id: PR:O94683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA-processing protein 7 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03610","PANTHER:PTHR13191:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.17","secondary_identifiers":["UniProtKB:O94683"],"synonyms":[{"name":"Spom972h-RRP7A","type":"exact"}],"termid":"PR:O94683"}


id: PBO:0067453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 577, pseudogene","termid":"PBO:0067453"}


id: FYPO:0001286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphoinositide measured in a cell is higher than normal. A phosphoinositide is any phosphatidylinositol that is phosphorylated at one or more of the hydroxy groups of inositol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"},{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular phosphoinositide level","synonyms":[{"name":"increased PI accumulation","type":"related"},{"name":"increased cellular PI level","type":"related"},{"name":"increased cellular phosphoinositide level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphoinositide level during vegetative growth","type":"exact"}],"termid":"FYPO:0001286"}


id: GO:0071690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the myosin-based thick filaments of myofibrils in cardiac muscle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle myosin thick filament assembly","termid":"GO:0071688"},{"relation_name":"part_of","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0030036","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"cardiac muscle myosin thick filament assembly","termid":"GO:0071690"}


id: GO:0061533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of norepinephrine by a cell, in which the norepinephrine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine secretion","termid":"GO:0048243"},{"relation_name":"is_a","term_name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"norepinephrine secretion, neurotransmission","synonyms":[{"name":"noradrenaline secretion, neurotransmission","type":"exact"}],"termid":"GO:0061533"}


id: PBO:0003994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit Cdm1","termid":"PBO:0003994"}


id: PBO:0109137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3039","termid":"PBO:0109137"}


id: PBO:0043531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COBL pseudogene 1","termid":"PBO:0043531"}


id: PBO:0059256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L22","termid":"PBO:0059256"}


id: PBO:0058105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4320","termid":"PBO:0058105"}


id: PBO:0051135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-7","termid":"PBO:0051135"}


id: PBO:0059388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S23 pseudogene 1","termid":"PBO:0059388"}


id: PBO:0039884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 1","termid":"PBO:0039884"}


id: PBO:0110316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF for Sar1, WD repeat protein Spo14","termid":"PBO:0110316"}


id: MOD:01869
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems mTRAQ light reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"mTRAQ light reporter+balance reagent acylated residue","termid":"MOD:01864"},{"relation_name":"is_a","term_name":"mTRAQ reporter fragment","termid":"MOD:01870"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mTRAQ light reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01869"}


id: PBO:0079055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 11-1","termid":"PBO:0079055"}


id: PBO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine O-acetyltransferase activity (predicted)","termid":"PBO:0000267"}


id: PBO:0040934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 5","termid":"PBO:0040934"}


id: PBO:0046454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 like 2","termid":"PBO:0046454"}


id: PBO:0077925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane phosphatase with tensin homology","termid":"PBO:0077925"}


id: PBO:0057397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-5","termid":"PBO:0057397"}


id: PATO:0001356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a cell by virtue of the bearer's ability to take on two or more different shapes during its life cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleomorphic","termid":"PATO:0001356"}


id: PBO:0036177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-S10_phosphorylation_during_vegetative_growth","termid":"PBO:0036177"}


id: MOD:00459
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 4x(13)C labeled succinyl group.","definition_xrefs":["PubMed:12175151","Unimod:66#N-term","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"4x(13)C labeled alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4C13), N-term & K","type":"related"},{"name":"Succinyl:13C(4)","type":"related"}],"termid":"MOD:00459"}


id: PBO:0068946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 190, pseudogene","termid":"PBO:0068946"}


id: PBO:0055093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2511","termid":"PBO:0055093"}


id: PBO:0044418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP2U1 and SGMS2 antisense RNA 1","termid":"PBO:0044418"}


id: PBO:0031393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_asparagine","termid":"PBO:0031393"}


id: PBO:0089793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Npr2","termid":"PBO:0089793"}


id: PBO:0071695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 1","termid":"PBO:0071695"}


id: GO:1901890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell junction assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"positively_regulates","term_name":"cell junction assembly","termid":"GO:0034329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of cell junction assembly","synonyms":[{"name":"activation of cell junction assembly","type":"narrow"},{"name":"up regulation of cell junction assembly","type":"exact"},{"name":"up-regulation of cell junction assembly","type":"exact"},{"name":"upregulation of cell junction assembly","type":"exact"}],"termid":"GO:1901890"}


id: GO:0006071
data:
  {"annotated_genes":["SJAG_04192","SJAG_04048","SJAG_00409","SJAG_04320","SJAG_01012","SJAG_03609"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64720,89180],"is_not":false,"summary":null,"term":"GO:0006071"},{"annotations":[84779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[102599,90105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[89179,112461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[84780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null,"SJAG_03609":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycerol metabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLYCEROLMETAB-PWY"],"synonyms":[{"name":"glycerol metabolism","type":"exact"}],"termid":"GO:0006071","terms_by_termid":{"GO:0006071":null,"GO:0006114":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null}}


id: FYPO:0006308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form actin cables that are thicker than normal in the medial region of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thick actin cables","termid":"FYPO:0002437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"thick actin cables in medial region","synonyms":[{"name":"increased actin cable thickness in medial region","type":"exact"},{"name":"thick actin cables in medial region during mitotic cell cycle","type":"related"},{"name":"thick actin cables in medial region during vegetative growth","type":"exact"},{"name":"thick actin cables in medial region of cell","type":"exact"},{"name":"thick formin-nucleated actin cables in medial region","type":"exact"}],"termid":"FYPO:0006308"}


id: PBO:0050224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 2","termid":"PBO:0050224"}


id: SO:0000831
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"member_of","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_member_region","synonyms":[{"name":"gene member region","type":"exact"}],"termid":"SO:0000831"}


id: GO:0031506
data:
  {"annotated_genes":["SJAG_02519","SJAG_00816","SJAG_01021","SJAG_01276","SJAG_04316","SJAG_01491","SJAG_03082","SJAG_04906","SJAG_04770","SJAG_00598","SJAG_01264"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101161,89149,100200,100617,114449,105130,102059,101046,83675,94020,96880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cell wall glycoproteins, any cell wall protein that contains covalently bound sugar residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01491":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04316":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall glycoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall glycoprotein anabolism","type":"exact"},{"name":"cell wall glycoprotein biosynthesis","type":"exact"},{"name":"cell wall glycoprotein formation","type":"exact"},{"name":"cell wall glycoprotein synthesis","type":"exact"}],"termid":"GO:0031506","terms_by_termid":{"GO:0000032":null}}


id: GO:0097163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Covalently binding to sulfur and delivering it to an acceptor molecule.","definition_xrefs":["PMID:16387657","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"sulfur carrier activity","termid":"GO:0097163"}


id: PBO:0003576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GIDA family tRNA uridine 5-carboxymethylaminomethyl modification enzyme (predicted)","termid":"PBO:0003576"}


id: PBO:0061217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 8 pseudogene 1","termid":"PBO:0061217"}


id: PBO:0028065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcriptional_response_to_pheromone","termid":"PBO:0028065"}


id: PBO:0039072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC component 4","termid":"PBO:0039072"}


id: PBO:0076976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 7","termid":"PBO:0076976"}


id: GO:0045594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ovarian cumulus cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of cumulus cell differentiation","termid":"GO:0045592"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"cumulus cell differentiation","termid":"GO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cumulus cell differentiation","synonyms":[{"name":"activation of cumulus cell differentiation","type":"narrow"},{"name":"positive regulation of ovarian cumulus cell differentiation","type":"exact"},{"name":"stimulation of cumulus cell differentiation","type":"narrow"},{"name":"up regulation of cumulus cell differentiation","type":"exact"},{"name":"up-regulation of cumulus cell differentiation","type":"exact"},{"name":"upregulation of cumulus cell differentiation","type":"exact"}],"termid":"GO:0045594"}


id: GO:0030148
data:
  {"annotated_genes":["SJAG_02168","SJAG_01219","SJAG_04178","SJAG_04878","SJAG_04913","SJAG_02885","SJAG_00176","SJAG_01057","SJAG_02305","SJAG_05311","SJAG_03953","SJAG_00506","SJAG_02706","SJAG_00880","SJAG_01356","SJAG_03076","SJAG_03015","SJAG_04986","SJAG_01300","SJAG_04550","SJAG_02488","SJAG_02590","SJAG_01857","SJAG_03690","SJAG_02085","SJAG_02842","SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85660,86746,87932,88071,89678,91272,93635,96363,97529,98277,101984,105737,105826,108647,110893,113603],"is_not":false,"summary":null,"term":"GO:0030148"},{"annotations":[88901,88030,104926,105825,106182,101641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"},{"annotations":[86883,91865,91381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[93036,88902,93795,101642,105827,102086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"membrane lipid biosynthetic process","termid":"GO:0046467"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00506":null,"SJAG_00880":null,"SJAG_01057":null,"SJAG_01219":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01857":null,"SJAG_02085":null,"SJAG_02168":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02488":null,"SJAG_02590":null,"SJAG_02706":null,"SJAG_02842":null,"SJAG_02885":null,"SJAG_03015":null,"SJAG_03076":null,"SJAG_03690":null,"SJAG_03953":null,"SJAG_04178":null,"SJAG_04550":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_04986":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingolipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5129"],"synonyms":[{"name":"sphingolipid anabolism","type":"exact"},{"name":"sphingolipid biosynthesis","type":"exact"},{"name":"sphingolipid formation","type":"exact"},{"name":"sphingolipid synthesis","type":"exact"}],"termid":"GO:0030148","terms_by_termid":{"GO:0030148":null,"GO:0046512":null,"GO:0046513":null,"GO:0051999":null}}


id: FYPO:0004986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription does not occur during the meiotic cell cycle. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription","termid":"FYPO:0002877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abolished transcription during meiotic cell cycle","synonyms":[{"name":"abolished meiotic cell cycle gene expression","type":"related"},{"name":"transcription abolished during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004986"}


id: GO:0150105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained, in a location within a cell-cell junction.","definition_xrefs":["PMID:26706435","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell junction","termid":"GO:1902414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell-cell junction","termid":"GO:0150105"}


id: GO:0015032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of hemolymph proteins by cells of the fat body of holometabolous insects, during the final larval stage. Uptake of these proteins prepares the insect for pupation and metamorphosis, since insect pupae do not feed and therefore depend on material that has been accumulated during larval life.","definition_xrefs":["PMID:10231363","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein import into fat body (obsolete GO:0015032)","synonyms":[{"name":"fat body metabolic process","type":"broad"},{"name":"fat body metabolism","type":"broad"},{"name":"fat body storage protein uptake","type":"exact"},{"name":"import of storage protein into fat body","type":"exact"},{"name":"storage protein import by fat body cells","type":"exact"},{"name":"storage protein import into fat body cells","type":"exact"},{"name":"storage protein transport into fat body cells","type":"exact"},{"name":"storage protein uptake into fat body cells","type":"exact"}],"termid":"GO:0015032"}


id: PBO:0034183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_inhibits","termid":"PBO:0034183"}


id: PBO:0031715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_transport","termid":"PBO:0031715"}


id: GO:0150077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuroinflammatory response.","definition_xrefs":["GOC:bc","PMID:18164423","GOC:aruk","PMID:10981966","PMID:11099416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"regulates","term_name":"neuroinflammatory response","termid":"GO:0150076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuroinflammatory response","termid":"GO:0150077"}


id: GO:0045062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of T cell selection that occurs in extrathymic locations, often resulting T cells of distinct specificities from those selected in the thymus.","definition_xrefs":["ISBN:0781735149","PMID:7880383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"},{"relation_name":"part_of","term_name":"extrathymic T cell differentiation","termid":"GO:0033078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extrathymic T cell selection","synonyms":[{"name":"extrathymic T lymphocyte selection","type":"exact"},{"name":"extrathymic T-cell selection","type":"exact"},{"name":"extrathymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045062"}


id: PBO:0017946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam8","termid":"PBO:0017946"}


id: SO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Archaeosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"archaeosine","secondary_identifiers":["RNAMOD:049"],"synonyms":[{"name":"G+","type":"exact"}],"termid":"SO:0001323"}


id: PATO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001089 elasticity value (obsolete PATO:0001089)","termid":"PATO:0001089"}


id: GO:0006193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ITP, inosine (5'-)triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate catabolic process","termid":"GO:0009207"},{"relation_name":"is_a","term_name":"ITP metabolic process","termid":"GO:0046041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ITP catabolic process","synonyms":[{"name":"ITP breakdown","type":"exact"},{"name":"ITP catabolism","type":"exact"},{"name":"ITP degradation","type":"exact"},{"name":"ITP hydrolysis","type":"exact"}],"termid":"GO:0006193"}


id: PBO:0077262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 10 pseudogene 2","termid":"PBO:0077262"}


id: PBO:0038324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malacards_disease_slug","termid":"PBO:0038324"}


id: PBO:0004397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ste13","termid":"PBO:0004397"}


id: GO:0035109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of limbs that are derived from an imaginal disc are generated and organized. A limb is an appendage of an animal used for locomotion or grasping. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete imaginal disc-derived limb morphogenesis (obsolete GO:0035109)","synonyms":[{"name":"imaginal disc-derived limb morphogenesis","type":"exact"}],"termid":"GO:0035109"}


id: FYECO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was carried out in vivo.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in vivo","termid":"FYECO:0000141"}


id: GO:0007144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the first meiotic division occurs in the female germline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I","termid":"GO:0007127"},{"relation_name":"is_a","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"female meiosis I","synonyms":[{"name":"female meiosis I nuclear division","type":"exact"}],"termid":"GO:0007144"}


id: PBO:0049422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GULP PTB domain containing engulfment adaptor 1","termid":"PBO:0049422"}


id: PBO:0027752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus","termid":"PBO:0027752"}


id: PBO:0029773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_cells_with_abnormal_morphology_(obsolete_FYPO:0002466)","termid":"PBO:0029773"}


id: PBO:0043126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding family member 4","termid":"PBO:0043126"}


id: FYPO:0007345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from euchromatic regions measured in a cell is higher than normal.","definition_xrefs":["PMID:18957202","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased euchromatin-derived RNA level","synonyms":[{"name":"increased accumulation of euchromatin-derived RNAs","type":"related"},{"name":"increased euchromatin-derived RNA accumulation","type":"related"},{"name":"increased euchromatin-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased euchromatin-derived RNA level during vegetative growth","type":"exact"},{"name":"increased euchromatin-derived transcript level","type":"exact"},{"name":"increased level of RNA transcribed from euchromatin","type":"exact"}],"termid":"FYPO:0007345"}


id: PBO:0017086
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously incorrectly annotated as the ortholog Sae2p","termid":"PBO:0017086"}


id: PBO:0050312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 14","termid":"PBO:0050312"}


id: PBO:0054973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2387","termid":"PBO:0054973"}


id: GO:0030295
data:
  {"annotated_genes":["SJAG_04020","SJAG_02057","SJAG_00333","SJAG_04502","SJAG_01213","SJAG_03699","SJAG_02332","SJAG_02232","SJAG_01411","SJAG_00439","SJAG_02026","SJAG_04140","SJAG_03371","SJAG_03936","SJAG_01000","SJAG_04200","SJAG_02605","SJAG_00457","SJAG_03618","SJAG_04614","SJAG_03340","SJAG_00142","SJAG_00236","SJAG_04509","SJAG_01605","SJAG_02785","SJAG_00318","SJAG_03453","SJAG_03695","SJAG_03090","SJAG_05017","SJAG_01401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84012,85374,87440,95208,95209,95314,103249,105946,105947,106637,107542,108594,112429,113368,114857,114973,114974],"is_not":false,"summary":null,"term":"GO:0030295"},{"annotations":[88266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019912"},{"annotations":[108195,107026,104987,101112,107310,97743,109082,113168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[106658,109083,114443,87002,87323,105379,87277,113369,101222,84080,96101,85389,87322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a protein kinase, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activator activity","termid":"GO:0019209"},{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00236":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_01000":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02605":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03936":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_05017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"protein kinase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030295","terms_by_termid":{"GO:0019912":null,"GO:0030295":null,"GO:0043539":null,"GO:0061575":null}}


id: GO:0008387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a steroid + donor-H2 + O2 = 7-alpha-hydroxysteroid + H2O.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"steroid 7-alpha-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2A12","type":"narrow"}],"termid":"GO:0008387"}


id: PBO:0041049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7","termid":"PBO:0041049"}


id: GO:0032909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of transforming growth factor-beta2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"regulates","term_name":"transforming growth factor beta2 production","termid":"GO:0032906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of transforming growth factor beta2 production","synonyms":[{"name":"regulation of TGF-B2 production","type":"exact"},{"name":"regulation of TGFB2 production","type":"exact"},{"name":"regulation of transforming growth factor-beta2 production","type":"exact"}],"termid":"GO:0032909"}


id: PBO:0039555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD49 pseudogene 2","termid":"PBO:0039555"}


id: RO:0002554
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of hyperparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"host_of","termid":"RO:0002453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparasitized_by","synonyms":[{"name":"has epiparasite","type":"related"},{"name":"has hyperparasite","type":"related"},{"name":"hyperparasitoidized by","type":"related"}],"termid":"RO:0002554"}


id: PBO:0070661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 32","termid":"PBO:0070661"}


id: GO:0014734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of an organ due to an increase in size (not length) of individual muscle fibers without cell division. In the case of skeletal muscle cells this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle hypertrophy","termid":"GO:0014897"},{"relation_name":"is_a","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle hypertrophy","termid":"GO:0014734"}


id: GO:0050982
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104554],"is_not":false,"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events by which a mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"},{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0050982","terms_by_termid":{"GO:0050982":null}}


id: PBO:0067491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 625, pseudogene","termid":"PBO:0067491"}


id: PBO:0078647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 2-3","termid":"PBO:0078647"}


id: SO:0000867
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift caused by deleting two bases.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift","termid":"SO:0000865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_2_frameshift","synonyms":[{"name":"minus 2 frameshift","type":"exact"}],"termid":"SO:0000867"}


id: PBO:0073806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 12","termid":"PBO:0073806"}


id: GO:0097493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell, providing elasticity and recoiling.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:23283722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural molecule activity conferring elasticity","termid":"GO:0097493"}


id: PBO:0081356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 181","termid":"PBO:0081356"}


id: GO:0035000
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligosaccharyltransferase (OST) complex that contains the seven polypeptides found in OST complex I, plus heterotrimeric Sec61alpha-beta-gamma and the tetrameric TRAP complex. Of the three forms of mammalian OST complexes identified, the OSTIII complex has the strongest affinity for ribosomes.","definition_xrefs":["PMID:15835887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharyltransferase complex","termid":"GO:0008250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575","GO:0005789","GO:0032991"],"is_obsolete":false,"name":"oligosaccharyltransferase III complex","synonyms":[{"name":"OSTCIII","type":"exact"}],"termid":"GO:0035000"}


id: GO:1900340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from formic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from formic acid","termid":"GO:1900339"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from formic acid","termid":"GO:2001127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from formic acid","synonyms":[{"name":"down regulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"down-regulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"downregulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"inhibition of methane biosynthetic process from formic acid","type":"narrow"}],"termid":"GO:1900340"}


id: PBO:0068820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 58, pseudogene","termid":"PBO:0068820"}


id: PATO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in two dimensions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-D extent","synonyms":[{"name":"2-D size","type":"exact"}],"termid":"PATO:0001709"}


id: PBO:0111069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fbp1 upstream regulatory lncRNA a","termid":"PBO:0111069"}


id: GO:0001635
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id: FYPO:0004622
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle disassembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle disassembly","termid":"FYPO:0004621"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0000337","FYPO:0000631"],"is_obsolete":false,"name":"abolished mitotic spindle disassembly","synonyms":[{"name":"abolished mitotic spindle disassembly during vegetative growth","type":"exact"},{"name":"abolished spindle disassembly during mitotic cell cycle","type":"related"},{"name":"spindle disassembly involved in mitosis abolished","type":"exact"}],"termid":"FYPO:0004622"}


id: GO:0075216
data:
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id: PBO:0034623
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cleavage_furrow","termid":"PBO:0034623"}


id: PBO:0068729
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 18, pseudogene","termid":"PBO:0068729"}


id: GO:0180008
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id: PBO:0090363
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP2 subunit Alp4","termid":"PBO:0090363"}


id: GO:0000375
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id: PBO:0076325
data:
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id: GO:0090340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of secretion of lysosomal enzymes","termid":"GO:0090182"},{"relation_name":"positively_regulates","term_name":"secretion of lysosomal enzymes","termid":"GO:0033299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of secretion of lysosomal enzymes","termid":"GO:0090340"}


id: _global:finished_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Xy is finished_by Y if Y part of X, and X and Y share a 3' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finished_by","termid":"_global:finished_by"}


id: PBO:0076925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFDP1 pseudogene 1","termid":"PBO:0076925"}


id: PBO:0057304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 515-1","termid":"PBO:0057304"}


id: PBO:0074033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 20","termid":"PBO:0074033"}


id: PBO:0004407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Pmh1","termid":"PBO:0004407"}


id: GO:0033786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-beta-D-heptose-1-phosphate + ATP = ADP-D-glycero-D-manno-heptose.","definition_xrefs":["MetaCyc:RXN0-4342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"heptose-1-phosphate adenylyltransferase activity","secondary_identifiers":["RHEA:27465"],"synonyms":[{"name":"D-beta-D-heptose 1-phosphate adenylyltransferase activity","type":"exact"},{"name":"heptose 1-phosphate adenyltransferase activity","type":"exact"}],"termid":"GO:0033786"}


id: PBO:0074610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 14B","termid":"PBO:0074610"}


id: GO:0006991
data:
  {"annotated_genes":["SJAG_05286","SJAG_02682","SJAG_01150","SJAG_01585","SJAG_04151","SJAG_04384","SJAG_03345","SJAG_02703","SJAG_03568","SJAG_02104","SJAG_01657","SJAG_00293","SJAG_00642","SJAG_01632","SJAG_05304","SJAG_03302","SJAG_03501","SJAG_04573","SJAG_01307","SJAG_04018","SJAG_01253","SJAG_00718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101995,87372,107820],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000639"},{"annotations":[109546,89809,89810,109547,113084,89808,109548],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000640"},{"annotations":[112503,90012,108673,114516,93960,85420,101940,98230,88756,108926,85151,100090,113086,114303,105964,85807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032933"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating deprivation of sterols. Sterols are a group of steroids characterized by the presence of one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_00718":null,"SJAG_01150":null,"SJAG_01253":null,"SJAG_01307":null,"SJAG_01585":null,"SJAG_01632":null,"SJAG_01657":null,"SJAG_02104":null,"SJAG_02682":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_03345":null,"SJAG_03501":null,"SJAG_03568":null,"SJAG_04018":null,"SJAG_04151":null,"SJAG_04384":null,"SJAG_04573":null,"SJAG_05286":null,"SJAG_05304":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sterol depletion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sterol depletion response","type":"exact"}],"termid":"GO:0006991","terms_by_termid":{"GO:0032933":null,"GO:2000639":null,"GO:2000640":null}}


id: PBO:0069478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 745, pseudogene","termid":"PBO:0069478"}


id: PBO:0040734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR activator of RhoGEF and GTPase","termid":"PBO:0040734"}


id: PBO:0084914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic spindle midzone-localized microtubule bundling protein; microtubule-associated protein (MAP) family member; required for spindle elongation and stabilization; undergoes cell cycle-regulated degradation by anaphase promoting complex; potential Cdc28p substrate; relative distribution to microtubules decreases upon DNA replication stress","termid":"PBO:0084914"}


id: GO:0150047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"G protein-coupled neurotransmitter receptor activity, occurring in the presynaptic membrane, involved in regulation of presynaptic membrane potential.","definition_xrefs":["GOC:bc","PMID:11498050","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential","type":"exact"}],"termid":"GO:0150047"}


id: PBO:0031087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_expression_regulation_phenotype","termid":"PBO:0031087"}


id: GO:0071700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory placode to attain its fully functional state. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"olfactory placode development","termid":"GO:0071698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode maturation","termid":"GO:0071700"}


id: GO:1904422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a D-galactosamine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:12057922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to D-galactosamine","termid":"GO:1904421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to D-galactosamine","termid":"GO:1904422"}


id: GO:0072382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a vesicle towards the minus end of a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"minus-end-directed organelle transport along microtubule","termid":"GO:0072385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"minus-end-directed vesicle transport along microtubule","synonyms":[{"name":"microtubule minus-end-directed vesicle distribution","type":"narrow"},{"name":"microtubule minus-end-directed vesicle localization","type":"exact"}],"termid":"GO:0072382"}


id: GO:0140910
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of ADAM17 in complex with regulatory iRhoms and FERM domain containing proteins.","definition_xrefs":["PMID:29897336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"iRhom2/ADAM17 sheddase complex","termid":"GO:0140910"}


id: GO:0030758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5-trihydroxy-3,7-dimethoxyflavone + S-adenosyl-L-methionine(1+) = 3',5-dihydroxy-3,4',7-trimethoxyflavone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:21832","EC:2.1.1.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3,7-dimethylquercitin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.83-RXN","KEGG_REACTION:R03456"],"synonyms":[{"name":"3,7-dimethylquercetin 4'-O-methyltransferase activity","type":"related"},{"name":"4'-OMT activity","type":"related"},{"name":"S-adenosyl-L-methionine:3',4',5-trihydroxy-3,7-dimethoxyflavone 4'-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:5,3',4'-trihydroxy-3,7-dimethoxyflavone 4'-O-methyltransferase activity","type":"related"},{"name":"flavonol 4'-O-methyltransferase activity","type":"related"},{"name":"flavonol 4'-methyltransferase activity","type":"related"}],"termid":"GO:0030758"}


id: GO:0060244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of cell proliferation in response to cell density.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"part_of","term_name":"contact inhibition","termid":"GO:0060242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in contact inhibition","termid":"GO:0060244"}


id: PBO:0066797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 96","termid":"PBO:0066797"}


id: PBO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 2","termid":"PBO:0046139"}


id: GO:0032628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-24 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-24 production","secondary_identifiers":["GO:0072622","GO:0045524"],"synonyms":[{"name":"IL-24 production","type":"exact"},{"name":"MDA7 production","type":"narrow"},{"name":"ST16 production","type":"narrow"},{"name":"interleukin-24 biosynthetic process","type":"narrow"},{"name":"interleukin-24 secretion","type":"narrow"}],"termid":"GO:0032628"}


id: MOD:01593
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01593"}


id: FYPO:0002177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell has normal volume, dimensions and shape, and is viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"},{"relation_name":"is_a","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000004","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"viable vegetative cell with normal cell morphology","synonyms":[{"name":"viable vegetative cell with normal cell shape and size","type":"exact"},{"name":"viable vegetative cell with normal morphology","type":"exact"}],"termid":"FYPO:0002177"}


id: GO:0007156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}


id: PR:P0CT39
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-6 gene.","definition_xrefs":["UniProtKB:P0CT39","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-6 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.08","synonyms":[{"name":"Spom972h-Tf2-6","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT39"}


