# terms

id: PBO:0072585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 7 homolog B, pseudogene","termid":"PBO:0072585"}


id: PBO:0049667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan binding protein 2","termid":"PBO:0049667"}


id: GO:1902351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an imidacloprid stimulus.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:23922869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to imidacloprid","termid":"GO:1902351"}


id: GO:1901503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ether.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ether biosynthetic process","synonyms":[{"name":"ether anabolism","type":"exact"},{"name":"ether biosynthesis","type":"exact"},{"name":"ether formation","type":"exact"},{"name":"ether synthesis","type":"exact"}],"termid":"GO:1901503"}


id: PBO:0054716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2125","termid":"PBO:0054716"}


id: PBO:0078252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 27","termid":"PBO:0078252"}


id: PBO:0040314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 8","termid":"PBO:0040314"}


id: PBO:0086395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cytochrome b5 reductase, localized to the plasma membrane; may be involved in regulation of lifespan; required for maturation of Gas1p and Pho8p, proposed to be involved in protein trafficking; PGA3 has a paralog, AIM33, that arose from the whole genome duplication","termid":"PBO:0086395"}


id: GO:0008954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan synthetase activity (obsolete GO:0008954)","synonyms":[{"name":"peptidoglycan synthetase activity","type":"exact"}],"termid":"GO:0008954"}


id: GO:0090078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a smooth muscle cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:dph","GOC:add","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foam cell differentiation","termid":"GO:0090077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle derived foam cell differentiation","termid":"GO:0090078"}


id: PR:Q09755
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24H6.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.10c","synonyms":[{"name":"3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAHP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC24H6.10c","type":"exact"},{"name":"phospho-2-keto-3-deoxyheptonate aldolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09755"}


id: PBO:0067609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 778, pseudogene","termid":"PBO:0067609"}


id: PBO:0039513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B pseudogene 1","termid":"PBO:0039513"}


id: GO:0036384
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110078],"is_not":false,"summary":null,"term":"GO:0036384"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP + H2O = CMP + phosphate.","definition_xrefs":["GOC:al","RHEA:64880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"CDP phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CDP diphosphatase activity","type":"broad"},{"name":"CDPase activity","type":"exact"},{"name":"cytidine diphosphatase activity","type":"exact"},{"name":"cytidine-diphosphatase activity","type":"exact"}],"termid":"GO:0036384","terms_by_termid":{"GO:0036384":null}}


id: PBO:0054979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2393","termid":"PBO:0054979"}


id: PBO:0085434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; specific for spermine; localizes to the plasma membrane; transcription of TPO2 is regulated by Haa1p; TPO2 has a paralog, TPO3, that arose from the whole genome duplication","termid":"PBO:0085434"}


id: PBO:0031264
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_G2/M_transition_of_mitotic_cell_cycle","termid":"PBO:0031264"}


id: PBO:0043166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class II major histocompatibility complex transactivator","termid":"PBO:0043166"}


id: PBO:0073675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein delta","termid":"PBO:0073675"}


id: PBO:0044855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 136","termid":"PBO:0044855"}


id: GO:1901432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to cycloalkane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to cycloalkane","termid":"GO:1901431"},{"relation_name":"negatively_regulates","term_name":"response to cycloalkane","termid":"GO:0014071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to cycloalkane","synonyms":[{"name":"down regulation of response to cycloalkane","type":"exact"},{"name":"down-regulation of response to cycloalkane","type":"exact"},{"name":"downregulation of response to cycloalkane","type":"exact"},{"name":"inhibition of response to cycloalkane","type":"narrow"}],"termid":"GO:1901432"}


id: PR:G2TRJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cx9C motif-containing protein 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.22","synonyms":[{"name":"Spom972h-cmc4","type":"exact"},{"name":"transcripts altered in meiosis protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRJ8"}


id: PBO:0051959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR interacting domain containing 2","termid":"PBO:0051959"}


id: PBO:0068343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 114","termid":"PBO:0068343"}


id: PBO:0089172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein repair carboxyl methyl esterase","termid":"PBO:0089172"}


id: PBO:0052753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 45","termid":"PBO:0052753"}


id: _global:exists_during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","direct_ancestors":[{"relation_name":"is_a","term_name":"during","termid":"_global:during"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exists_during","secondary_identifiers":["GOREL:0000032"],"synonyms":[{"name":"during","type":"broad"}],"termid":"_global:exists_during"}


id: PBO:0056638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MED14 opposite strand","termid":"PBO:0056638"}


id: PBO:0070007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1304, pseudogene","termid":"PBO:0070007"}


id: FYPO:0002805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which sodium ion import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal sodium import","synonyms":[{"name":"normal sodium import across plasma membrane","type":"exact"},{"name":"normal sodium import during mitotic cell cycle","type":"related"},{"name":"normal sodium import during vegetative growth","type":"exact"},{"name":"normal sodium import into cell","type":"exact"},{"name":"normal sodium ion import into cell","type":"exact"},{"name":"normal sodium uptake","type":"exact"}],"termid":"FYPO:0002805"}


id: FYPO:0004170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in centromeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0007886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"abolished centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 dimethylation at centromeric region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at centromere during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0004170"}


id: PBO:0059186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRFAP1 pseudogene 1","termid":"PBO:0059186"}


id: GO:0017181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of peptidyl-diphthine, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthine catabolic process (obsolete GO:0017181)","synonyms":[{"name":"peptidyl-diphthine breakdown","type":"exact"},{"name":"peptidyl-diphthine catabolism","type":"exact"},{"name":"peptidyl-diphthine degradation","type":"exact"}],"termid":"GO:0017181"}


id: PBO:0089557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic tetraspan protein, claudin Dni2","termid":"PBO:0089557"}


id: PBO:0084694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA polymerase gamma; single subunit of mitochondrial DNA polymerase in yeast, in contrast to metazoan complex of catalytic and accessory subunits; polymorphic in yeast, petites occur more frequently in some lab strains; human ortholog POLG complements yeast mip1 mutant; mutations in human POLG associated with Alpers-Huttenlocher syndrome (AHS), progressive external ophthalmoplegia (PEO), parkinsonism, other mitochondrial diseases","termid":"PBO:0084694"}


id: FYPO:0006117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid and has two or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"septated spheroid vegetative cell","termid":"FYPO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0000631"],"is_obsolete":false,"name":"multiseptate spheroid vegetative cell","synonyms":[{"name":"multiseptate rounded vegetative cell","type":"exact"}],"termid":"FYPO:0006117"}


id: PBO:0017890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II binding AAA family ATPase Npa3 (predicted)","termid":"PBO:0017890"}


id: PBO:0084285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for V-ATPase function; not an actual component of the vacuolar H+-ATPase (V-ATPase) complex; diverged ortholog of human XMEA (X-linked Myopathy with Excessive Autophagy); functions in the assembly of the V-ATPase; localized to the yeast endoplasmic reticulum (ER)","termid":"PBO:0084285"}


id: GO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hatching of the cellular blastocyst from the zona pellucida.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hatching","termid":"GO:0035188"},{"relation_name":"part_of","term_name":"blastocyst development","termid":"GO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastocyst hatching","termid":"GO:0001835"}


id: PBO:0057067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 148b","termid":"PBO:0057067"}


id: PBO:0005896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal small subunit (predicted)","termid":"PBO:0005896"}


id: GO:0001546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of follicles surrounded by two or more layers of granulosa cells up to the onset of antrum formation.","direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"},{"relation_name":"part_of","term_name":"multi-layer follicle stage","termid":"GO:0048162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"preantral ovarian follicle growth","termid":"GO:0001546"}


id: PBO:0042737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPN antisense RNA 1","termid":"PBO:0042737"}


id: FYPO:0007060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin filament polymerization, i.e. the addition of actin monomers to a filament, occurs to a lower extent than normal as part of contractile ring assembly during cytokinesis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased actin filament depolymerization involved in actomyosin contractile ring assembly","synonyms":[{"name":"decreased actin filament depolymerisation involved in actomyosin contractile ring assembly","type":"exact"},{"name":"decreased actin filament depolymerization involved in actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"decreased actin filament depolymerization involved in actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"decreased actin filament depolymerization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"reduced actin filament depolymerization involved in actomyosin contractile ring assembly","type":"exact"}],"termid":"FYPO:0007060"}


id: PR:Q9UTC5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YggC that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00205","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase C227.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.14","secondary_identifiers":["UniProtKB:Q9UTC5"],"synonyms":[{"name":"Spom972h-yggC","type":"exact"}],"termid":"PR:Q9UTC5"}


id: PBO:0053184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LENG8 antisense RNA 1","termid":"PBO:0053184"}


id: MOD:01918
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to (2S,5S)-5-hydroxylysine.","definition_xrefs":["PubMed:22238144","PubMed:19574390","RESID:AA0578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-hydroxy-L-lysine","termid":"MOD:00037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,5S)-5-hydroxylysine","synonyms":[{"name":"(2S,5S)-2,6-diamino-5-hydroxyhexanoic acid","type":"exact"},{"name":"(2S,5S)-5-hydroxylysine","type":"exact"},{"name":"2,6-bisazanyl-5-hydroxyhexanoic acid","type":"exact"},{"name":"2,6-diamino-2,3,4,6-tetradeoxyhexonic acid","type":"exact"},{"name":"L-allo-delta-hydroxylysine","type":"exact"},{"name":"L-threo-delta-hydroxylysine","type":"exact"},{"name":"MOD_RES (5S)-5-hydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-delta-hydroxycaproic acid","type":"exact"}],"termid":"MOD:01918"}


id: PBO:0087176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II third largest subunit B44; part of central core; similar to prokaryotic alpha subunit","termid":"PBO:0087176"}


id: SO:0000518
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene and one DJ-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_DJ_cluster","synonyms":[{"name":"V DJ cluster","type":"exact"},{"name":"V-(DJ)-CLUSTER","type":"exact"}],"termid":"SO:0000518"}


id: GO:0031845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5 neuropeptide Y receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor binding","termid":"GO:0031841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 5 neuropeptide Y receptor binding","synonyms":[{"name":"type 5 neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031845"}


id: PBO:0058156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4451","termid":"PBO:0058156"}


id: GO:0009442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways by which allantoin is processed and converted to ureidoglycolate, and then into metabolically useful substrates. E. coli are able to utilize allantoin as a sole nitrogen source under anaerobic conditions by converting it to ureidoglycolate; this may be further metabolized to produce glyoxylate and thence 3-phosphoglycerate, or alternatively oxidized to oxolureate, which can converted into oxamate and carbamoylphosphate. This may then be further metabolized to CO2, NH4+ and ATP.","definition_xrefs":["MetaCyc:PWY0-41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin catabolic process","termid":"GO:0000256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantoin assimilation pathway","synonyms":[{"name":"allantoin catabolic process via ureidoglycolate","type":"exact"},{"name":"allantoin catabolism via ureidoglycolate","type":"exact"},{"name":"allantoin degradation pathway","type":"related"}],"termid":"GO:0009442"}


id: GO:0032398
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of a MHC class Ib alpha chain and, in most cases, an invariant beta2-microglobin chain, and with or without a bound peptide or lipid antigen. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["PMID:15928678","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"MHC class Ib protein complex","termid":"GO:0032398"}


id: PBO:0005533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cu metalloregulatory transcription factor Cuf2 (predicted)","termid":"PBO:0005533"}


id: GO:0033292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of the T-tubule. A T-tubule is an invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"muscle cell development","termid":"GO:0055001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"T-tubule organization","synonyms":[{"name":"T-tubule organisation","type":"exact"},{"name":"T-tubule organization and biogenesis","type":"related"},{"name":"transverse tubule organization","type":"exact"}],"termid":"GO:0033292"}


id: PBO:0042967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 5","termid":"PBO:0042967"}


id: PBO:0066380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radixin","termid":"PBO:0066380"}


id: PBO:0091168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIIa","termid":"PBO:0091168"}


id: GO:0102480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + flucytosine + H2O = 5-fluorouracil + ammonium.","definition_xrefs":["GOC:pz","EC:3.5.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"5-fluorocytosine deaminase activity","secondary_identifiers":["MetaCyc:RXN-14129"],"termid":"GO:0102480"}


id: PBO:0082404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the oligosaccharyl transferase glycoprotein complex; required for N-linked glycosylation of proteins in the endoplasmic reticulum; human homolog DDOST can complement yeast growth defect during down-regulation of yeast gene","termid":"PBO:0082404"}


id: PBO:0074997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-8","termid":"PBO:0074997"}


id: GO:0141096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription repressor activity regulated by binding to a ligand and that inhibits the transcription of specific genes and gene sets.","definition_xrefs":["PMID:21555518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"},{"relation_name":"is_a","term_name":"ligand-activated transcription factor activity","termid":"GO:0098531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0001217"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0003700","GO:0140110","GO:0003674","GO:0001217"],"is_obsolete":false,"name":"ligand-activated transcription repressor activity","termid":"GO:0141096"}


id: PBO:0046905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member E, pseudogene","termid":"PBO:0046905"}


id: PBO:0047691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fms related receptor tyrosine kinase 3 ligand","termid":"PBO:0047691"}


id: PBO:0048204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit beta2","termid":"PBO:0048204"}


id: GO:1905639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrial mRNA catabolic process.","definition_xrefs":["PMID:27122350","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial RNA catabolic process","termid":"GO:0000962"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of mitochondrial mRNA catabolic process","termid":"GO:1905637"},{"relation_name":"positively_regulates","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial mRNA catabolic process","synonyms":[{"name":"activation of mitochondrial mRNA catabolic process","type":"narrow"},{"name":"up regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"up-regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"upregulation of mitochondrial mRNA catabolic process","type":"exact"}],"termid":"GO:1905639"}


id: GO:1904892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor signaling via STAT.","definition_xrefs":["PMID:24587195","GOC:rjd","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor signaling pathway via STAT","synonyms":[{"name":"regulation of STAT signalling pathway","type":"exact"},{"name":"regulation of kinase activated-STAT cascade","type":"exact"},{"name":"regulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904892"}


id: PBO:0070086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear variant sequence with SNRPE pseudogene sequence","termid":"PBO:0070086"}


id: PBO:0056054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like 3 pre-mRNA splicing factor pseudogene 1","termid":"PBO:0056054"}


id: PBO:0014243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit Mdm10 (predicted)","termid":"PBO:0014243"}


id: PBO:0030975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methylation","termid":"PBO:0030975"}


id: GO:1905825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of selenocysteine metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:19716792","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"regulates","term_name":"selenocysteine metabolic process","termid":"GO:0016259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"regulation of selenocysteine metabolic process","synonyms":[{"name":"regulation of selenocysteine metabolism","type":"exact"}],"termid":"GO:1905825"}


id: FYPO:0007372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of chlorpromazine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to chlorpromazine","synonyms":[{"name":"resistance to chlorpromazine during mitotic cell cycle","type":"related"},{"name":"resistance to chlorpromazine during vegetative growth","type":"exact"},{"name":"resistant to chlorpromazine","type":"exact"}],"termid":"FYPO:0007372"}


id: FYPO:0007620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal when the cell is subject to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to oxidative stress","synonyms":[{"name":"decreased protein phosphorylation during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during oxidative stress response","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007620"}


id: PBO:0058442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5007","termid":"PBO:0058442"}


id: PBO:0081777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705E, pseudogene","termid":"PBO:0081777"}


id: GO:1901006
data:
  {"annotated_genes":["SJAG_01820"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111965],"is_not":false,"summary":null,"term":"GO:1901006"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ubiquinone-6.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"},{"relation_name":"is_a","term_name":"ubiquinone-6 metabolic process","termid":"GO:1901004"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006744"}],"interesting_parent_ids":["GO:0006744","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ubiquinone-6 biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ubiquinone-6 anabolism","type":"exact"},{"name":"ubiquinone-6 biosynthesis","type":"exact"},{"name":"ubiquinone-6 formation","type":"exact"},{"name":"ubiquinone-6 synthesis","type":"exact"}],"termid":"GO:1901006","terms_by_termid":{"GO:1901006":null}}


id: PBO:0073165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC63 homolog, protein translocation regulator pseudogene 2","termid":"PBO:0073165"}


id: GO:1990476
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool that remain unreleased even after prolonged stimulation causes a saturating degree of vesicular turnover. 50-80% of the total number of synaptic vesicles at a resting terminal bouton are in this pool.","definition_xrefs":["PMID:22745285","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"synaptic vesicle, resting pool","synonyms":[{"name":"reserve pool of synaptic vesicles","type":"exact"},{"name":"resting pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990476"}


id: PBO:0089705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase beta subunit Atp2","termid":"PBO:0089705"}


id: PATO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The period before death of the organism.","definition_xrefs":["merriam-webster:merriam-webster"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0002085 pre-mortem (obsolete PATO:0002085)","termid":"PATO:0002085"}


id: PATO:0001792
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located on left side of from the a another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left side of","termid":"PATO:0001792"}


id: PBO:0071709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 7","termid":"PBO:0071709"}


id: GO:0042947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucosides from one side of a membrane to the other. Glucosides are glycosides in which the sugar group is a glucose residue.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}


id: GO:0097314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of the apoptosome, a multisubunit protein complex involved in the signaling phase of the apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0023052","GO:0065003"],"is_obsolete":false,"name":"apoptosome assembly","synonyms":[{"name":"apoptosome formation","type":"exact"}],"termid":"GO:0097314"}


id: PBO:0087371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spt4p/5p (DSIF) transcription elongation factor complex subunit; the Spt4/5 complex binds to ssRNA in a sequence-specific manner, and in concert with RNAP I and II has multiple roles regulating transcriptional elongation, RNA processing, quality control, and transcription-coupled repair; interacts with DNA upstream of RNAPII and the non-template strand of the transcription bubble; Spt5p is the only transcription elongation factor conserved in all domains of life","termid":"PBO:0087371"}


id: PBO:0059343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S10 pseudogene 2","termid":"PBO:0059343"}


id: PBO:0063298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily C, 5","termid":"PBO:0063298"}


id: PBO:0052225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 3","termid":"PBO:0052225"}


id: PBO:0075966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 7","termid":"PBO:0075966"}


id: FYPO:0001971
data:
  {"alleles_by_uniquename":{"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115510],"is_not":false,"summary":null,"term":"FYPO:0001971"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal, and results in the formation of a chain of cells. Cells in the chain visually resemble wild-type cells, except that they remain connected, often via remnants of septum edging material, and may continue to undergo normal mitosis and septum formation.","definition_xrefs":["PomBase:vw","PMID:8873452","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03444":null},"genotype_count":1,"genotypes_by_uniquename":{"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis resulting in chained cells","references_by_uniquename":{"PMID:24699070":null},"single_locus_annotated_genes":["SJAG_03444"],"single_locus_genotype_uniquenames":["agn1delta"],"synonyms":[{"name":"abnormal cell separation after cytokinesis resulting in chained cells during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis resulting in chained cells during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation resulting in chained cells","type":"exact"},{"name":"cell clumping","type":"related"},{"name":"clumped cells","type":"related"}],"termid":"FYPO:0001971","terms_by_termid":{"FYPO:0001971":null}}


id: PBO:0063685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 5","termid":"PBO:0063685"}


id: PBO:0089481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topoisomerase II-associated deadenylation-dependent mRNA-decapping factor Pdc2","termid":"PBO:0089481"}


id: GO:1904919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-cystine from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["GO_REF:0000078","PMID:22822152","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"L-cystine transport","termid":"GO:0015811"},{"relation_name":"is_a","term_name":"neutral amino acid transmembrane export from vacuole","termid":"GO:0034489"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"transmembrane L-cystine transport from lysosomal lumen to cytosol","termid":"GO:1904919"}


id: PBO:0063249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 14 pseudogene","termid":"PBO:0063249"}


id: PBO:0046865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 2C, pseudogene","termid":"PBO:0046865"}


id: PBO:0091585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga9","termid":"PBO:0091585"}


id: GO:0030558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of pseudouridylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA pseudouridylation guide activity","termid":"GO:0030558"}


id: GO:0098717
data:
  {"annotated_genes":["SJAG_05175"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104396],"is_not":false,"summary":null,"term":"GO:0098717"}]},"cv_name":"biological_process","definition":"The directed movement of pantothenate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pantothenate transmembrane transport","termid":"GO:0015887"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"pantothenate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901688","GO:0044755"],"synonyms":[{"name":"pantothenate import","type":"related"},{"name":"pantothenate import into cell","type":"exact"}],"termid":"GO:0098717","terms_by_termid":{"GO:0098717":null}}


id: PBO:0042180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1 interacting protein 1","termid":"PBO:0042180"}


id: PBO:0074355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 3","termid":"PBO:0074355"}


id: PBO:0061950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 2","termid":"PBO:0061950"}


id: GO:0046620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of growth of an organ of an organism.","definition_xrefs":["GOC:bf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"organ growth","termid":"GO:0035265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of organ growth","termid":"GO:0046620"}


id: GO:0048290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to biosynthesis of an IgA isotype, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and one of the IgA constant region gene segments in the immunoglobulin heavy chain locus.","definition_xrefs":["PMID:9186655","PMID:12370374","ISBN:0781735149","PMID:2113175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"isotype switching to IgA isotypes","synonyms":[{"name":"class switching to IgA isotypes","type":"exact"},{"name":"isotype switch recombination to IgA isotypes","type":"exact"}],"termid":"GO:0048290"}


id: PBO:0082044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyglutarate transhydrogenase, and minor D-lactate dehydrogenase; converts D-2-hydroxyglutarate (D-2HG), an oncometabolite, to alpha-ketoglutarate in the presence of FAD, with concomitant reduction of pyruvate to D-lactate; minor lactate dehydrogenase activity; component of the retrograde regulon that consists of genes whose expression are stimulated by damage to mitochondria and reduced in cells grown with glutamate as the sole nitrogen source; located in the cytoplasm","termid":"PBO:0082044"}


id: PBO:0061114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 5","termid":"PBO:0061114"}


id: GO:0009603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a symbiotic fungus, a fungus living in close physical association with another organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of symbiont","termid":"GO:0009602"},{"relation_name":"is_a","term_name":"response to symbiotic fungus","termid":"GO:0009610"},{"relation_name":"is_a","term_name":"detection of fungus","termid":"GO:0016046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of symbiotic fungus","synonyms":[{"name":"detection of symbiotic fungi","type":"exact"},{"name":"perception of symbiotic fungi","type":"related"},{"name":"perception of symbiotic fungus","type":"related"}],"termid":"GO:0009603"}


id: PBO:0049901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 2","termid":"PBO:0049901"}


id: GO:0014737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle atrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle atrophy","termid":"GO:0014735"},{"relation_name":"is_a","term_name":"positive regulation of muscle adaptation","termid":"GO:0014744"},{"relation_name":"positively_regulates","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle atrophy","termid":"GO:0014737"}


id: PBO:0048107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far upstream element binding protein 3","termid":"PBO:0048107"}


id: PBO:0060076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 23","termid":"PBO:0060076"}


id: FYPO:0005669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype with abnormal chromosome segregation that is observed when a cell is exposed to hydroxyurea. In this type of cut phenotype, a cell undergoes septation despite abnormal chromosome segregation such that the nucleus forms a single mass through which the septum forms.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut with abnormal chromosome segregation during cellular response to hydroxyurea (obsolete FYPO:0005669)","synonyms":[{"name":"cut with abnormal chromosome segregation during cellular response to HU","type":"exact"},{"name":"cut with abnormal chromosome segregation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"cut with abnormal chromosome segregation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"cut with abnormal chromosome segregation in response to hydroxyurea","type":"exact"},{"name":"cut with abnormal mitotic chromosome segregation during cellular response to hydroxyurea","type":"exact"},{"name":"septation following abnormal chromosome segregation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005669"}


id: GO:0070152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling isoleucine to isoleucyl-tRNA in a mitochondrion, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoleucyl-tRNA aminoacylation","termid":"GO:0006428"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0140053","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mitochondrial isoleucyl-tRNA aminoacylation","termid":"GO:0070152"}


id: PATO:0001292
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An EM radiation quality that is independent of the EM wavelength range.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"full-spectrum EM radiation quality","termid":"PATO:0001292"}


id: GO:0030602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the lysis of peptide bonds with broad specificity similar to that of pepsin A. Clots milk by cleavage of a single Ser-Phe-l-Met-Ala bond in kappa-casein.","definition_xrefs":["EC:3.4.23.4"],"gene_count":0,"genotype_count":0,"name":"obsolete chymosin activity (obsolete GO:0030602)","synonyms":[{"name":"chymosin activity","type":"exact"},{"name":"rennin","type":"related"},{"name":"rennin (but this should be avoided since it leads to confusion with renin)","type":"related"}],"termid":"GO:0030602"}


id: PBO:0071469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 10","termid":"PBO:0071469"}


id: GO:0050081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + maltose 6'-phosphate = D-glucose + D-glucose 6-phosphate.","definition_xrefs":["EC:3.2.1.122","MetaCyc:MALTOSE-6-PHOSPHATE-GLUCOSIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"maltose-6'-phosphate glucosidase activity","secondary_identifiers":["RHEA:20421"],"synonyms":[{"name":"maltose-6'-phosphate 6-phosphoglucohydrolase activity","type":"related"},{"name":"phospho-alpha-glucosidase activity","type":"related"}],"termid":"GO:0050081"}


id: PBO:0028337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028337"}


id: PBO:0001487
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telomere-associated in Yarrowia lipolytica","termid":"PBO:0001487"}


id: PBO:0090151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, coenzyme A, Leu5","termid":"PBO:0090151"}


id: PBO:0082868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core subunit of the RENT complex; involved in nucleolar silencing and telophase exit; stimulates transcription by RNA polymerase I and regulates nucleolar structure; NET1 has a paralog, TOF2, that arose from the whole genome duplication","termid":"PBO:0082868"}


id: PBO:0045007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 2","termid":"PBO:0045007"}


id: PBO:0047624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIGNL2 divergent transcript","termid":"PBO:0047624"}


id: FYPO:0005762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which homocitrate synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished homocitrate synthase activity","synonyms":[{"name":"homocitrate synthase activity abolished","type":"exact"}],"termid":"FYPO:0005762"}


id: GO:0015423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + maltose(out) = ADP + phosphate + maltose(in).","definition_xrefs":["RHEA:22132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"ABC-type oligosaccharide transporter activity","termid":"GO:0015422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type maltose transporter activity","secondary_identifiers":["EC:7.5.2.1","MetaCyc:ABC-16-RXN"],"synonyms":[{"name":"ABC-type maltose transporter","type":"exact"},{"name":"ATP-dependent maltose transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled maltose transmembrane transporter activity","type":"related"},{"name":"maltooligosaccharide-importing ATPase activity","type":"related"},{"name":"maltose ABC transporter","type":"exact"},{"name":"maltose-transporting ATPase activity","type":"related"}],"termid":"GO:0015423"}


id: PBO:0026793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_spheroid_vegetative_cell","termid":"PBO:0026793"}


id: GO:0002238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octamer oligosaccharide.","definition_xrefs":["GOC:sm","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external biotic stimulus","termid":"GO:0043207"},{"relation_name":"part_of","term_name":"response to fungus","termid":"GO:0009620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to molecule of fungal origin","synonyms":[{"name":"response to fungus associated molecule","type":"exact"}],"termid":"GO:0002238"}


id: GO:0000086
data:
  {"annotated_genes":["SJAG_03854","SJAG_01076","SJAG_01084","SJAG_01000","SJAG_01901","SJAG_00117","SJAG_04486","SJAG_01605","SJAG_04671","SJAG_01146","SJAG_00216","SJAG_02592","SJAG_01118","SJAG_03126","SJAG_01456","SJAG_02074","SJAG_06592","SJAG_00318","SJAG_02723","SJAG_01805","SJAG_03927","SJAG_02342","SJAG_04140","SJAG_00364","SJAG_00082","SJAG_02332","SJAG_01044","SJAG_01680","SJAG_00214","SJAG_00883","SJAG_03695","SJAG_03486","SJAG_03073","SJAG_02576","SJAG_01429","SJAG_02858","SJAG_02098","SJAG_01837","SJAG_03026","SJAG_00256","SJAG_04597","SJAG_03942","SJAG_03067","SJAG_04287","SJAG_02771","SJAG_00640","SJAG_03309","SJAG_03048","SJAG_03602","SJAG_03592","SJAG_01205","SJAG_04394","SJAG_04280","SJAG_02392","SJAG_01010","SJAG_00526","SJAG_01855","SJAG_00600","SJAG_02266","SJAG_03160","SJAG_01873","SJAG_05373","SJAG_02563","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98479,107538],"is_not":false,"summary":null,"term":"GO:0000086"},{"annotations":[86149,90538,96651,97549,112109],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0044878"},{"annotations":[95311,113196,90090,105428,103945,87560,96652,112168,90068,85279,108143,95477,112906,102723,113365,88648,99442],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033314"},{"annotations":[94562,91980,90669,112111],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031569"},{"annotations":[90070,84719,110368,102724,113115,87561,107837,85280,87919,86365,113794,105429,97167,95478,96653],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0007095"},{"annotations":[103119,102755,107540,108590,86150,100607,104682,107670,110369,91982,89042,90498,89688,97111,112112,89329,110574,107931],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010972"},{"annotations":[112593,88262,94563,90671,84230,87859,90540,84221,107307,99612,95120,97877,104684,89929,90501,106453,103342,92457,112781],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010971"},{"annotations":[84027,97500],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905287"},{"annotations":[98511,107309,108074],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010389"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle transition by which a cell in G2 commits to M phase. The process begins when the kinase activity of M cyclin/CDK complex reaches a threshold high enough for the cell cycle to proceed. This is accomplished by activating a positive feedback loop that results in the accumulation of unphosphorylated and active M cyclin/CDK complex.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle phase transition","termid":"GO:0044772"},{"relation_name":"is_a","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01456":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_01901":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02342":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04486":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"G2/M transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic G2/M transition","type":"exact"}],"termid":"GO:0000086","terms_by_termid":{"GO:0000086":null,"GO:0007095":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0044878":null,"GO:1905287":null}}


id: PBO:0042851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 61","termid":"PBO:0042851"}


id: PBO:0048490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 2","termid":"PBO:0048490"}


id: PR:Q9Y7P6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug72 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7P6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 72 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1902.02","synonyms":[{"name":"Spom972h-mug72","type":"exact"}],"termid":"PR:Q9Y7P6"}


id: PBO:0028684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_of_mitotic_spindle_pole_body_localization_to_nuclear_envelope","termid":"PBO:0028684"}


id: GO:0002933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a hydroxyl group to one or more fatty acids in a lipid.","definition_xrefs":["GOC:hjd","PMID:15658937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid hydroxylation","synonyms":[{"name":"fatty acid hydroxylation","type":"related"}],"termid":"GO:0002933"}


id: MOD:01320
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:16078144","Unimod:176#K","PubMed:9448752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to lysine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01320"}


id: PBO:0079549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 2","termid":"PBO:0079549"}


id: PBO:0017487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates","termid":"PBO:0017487"}


id: GO:0004982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an N-formyl peptide to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"N-formyl peptide receptor activity","synonyms":[{"name":"Fmet-leu-phe receptor","type":"exact"}],"termid":"GO:0004982"}


id: PBO:0039279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 8, pseudogene","termid":"PBO:0039279"}


id: PBO:0110336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V1F pseudogene 2","termid":"PBO:0110336"}


id: GO:0061512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cilium","termid":"GO:0061512"}


id: PBO:0065431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 4","termid":"PBO:0065431"}


id: PBO:0048457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaryl-CoA dehydrogenase","termid":"PBO:0048457"}


id: PBO:0057926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3651","termid":"PBO:0057926"}


id: GO:0071279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cobalt ion","termid":"GO:0032025"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cobalt ion","termid":"GO:0071279"}


id: PBO:0049733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HCLS1 associated protein X-1","termid":"PBO:0049733"}


id: GO:0097625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of basic amino acids from one side of a membrane to the other. Basic amino acids have a pH above 7. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"low-affinity basic amino acid transmembrane transporter activity","synonyms":[{"name":"low affinity basic amino acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0097625"}


id: GO:0015171
data:
  {"annotated_genes":["SJAG_00149","SJAG_04296","SJAG_04984","SJAG_04295","SJAG_02133","SJAG_02029","SJAG_00019","SJAG_03829","SJAG_01096","SJAG_04637","SJAG_02150","SJAG_00015","SJAG_02941","SJAG_02062","SJAG_04787","SJAG_00522","SJAG_00543","SJAG_02144","SJAG_00626","SJAG_03400","SJAG_01994","SJAG_04718","SJAG_03899","SJAG_02946","SJAG_06598","SJAG_04725","SJAG_04588","SJAG_02113","SJAG_04903","SJAG_00051","SJAG_02947","SJAG_04957","SJAG_00877","SJAG_01770","SJAG_05342","SJAG_03256","SJAG_01998","SJAG_03827","SJAG_04135","SJAG_02955"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74569,75628,76511,83741,83742,83743,83744,83745,83746,83747,83748,83785,83786,83787,83788,85863,96141,99650,99887,102136,105544,105551,106700,109812,114330,114331,114332,114333,114334,114335,114336,114337,114432,114527,115072],"is_not":false,"summary":null,"term":"GO:0015171"},{"annotations":[91836,90727,86550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015174"},{"annotations":[115076,109806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[94357,96360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[92160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[92161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015179"},{"annotations":[99961,96482,93498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[106136,98922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[92694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[94358,99962,92695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[93499,99963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[106137,98923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[93500,96483,99964,106138,98924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[104016,94359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[96474,97330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[99965,86767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[99966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00015":null,"SJAG_00019":null,"SJAG_00051":null,"SJAG_00149":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00877":null,"SJAG_01096":null,"SJAG_01770":null,"SJAG_01994":null,"SJAG_01998":null,"SJAG_02029":null,"SJAG_02062":null,"SJAG_02113":null,"SJAG_02133":null,"SJAG_02144":null,"SJAG_02150":null,"SJAG_02941":null,"SJAG_02946":null,"SJAG_02947":null,"SJAG_02955":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03827":null,"SJAG_03829":null,"SJAG_03899":null,"SJAG_04135":null,"SJAG_04295":null,"SJAG_04296":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04787":null,"SJAG_04903":null,"SJAG_04957":null,"SJAG_04984":null,"SJAG_05342":null,"SJAG_06598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-352108","Reactome:R-HSA-351963","Reactome:R-HSA-352385","Reactome:R-HSA-352103","Reactome:R-HSA-352232","Reactome:R-HSA-375770","Reactome:R-HSA-379432","Reactome:R-HSA-352059","Reactome:R-HSA-375776","Reactome:R-HSA-379415","Reactome:R-HSA-888592","Reactome:R-HSA-352174","Reactome:R-HSA-352158","Reactome:R-HSA-5660890","Reactome:R-HSA-376200","Reactome:R-HSA-352119","Reactome:R-HSA-352191","Reactome:R-HSA-352379","Reactome:R-HSA-352364","Reactome:R-HSA-210439","Reactome:R-HSA-352107","Reactome:R-HSA-352347","Reactome:R-HSA-375405","Reactome:R-HSA-375768","Reactome:R-HSA-379426","Reactome:R-HSA-5659755","Reactome:R-HSA-378513","Reactome:R-HSA-375417","Reactome:R-HSA-5655702","Reactome:R-HSA-352029","Reactome:R-HSA-8952726","Reactome:R-HSA-352052","GO:0015359","Reactome:R-HSA-5659674","Reactome:R-HSA-5660694","Reactome:R-HSA-212642","Reactome:R-HSA-375473","Reactome:R-HSA-352136","Reactome:R-HSA-352354","Reactome:R-HSA-352371","Reactome:R-HSA-375790","Reactome:R-HSA-351987","Reactome:R-HSA-352182","Reactome:R-HSA-375487","Reactome:R-HSA-5653850","Reactome:R-HSA-5659734","Reactome:R-HSA-5660910"],"synonyms":[{"name":"amino acid permease activity","type":"exact"},{"name":"amino acid transporter activity","type":"broad"},{"name":"amino acid/choline transmembrane transporter activity","type":"narrow"},{"name":"general amino acid permease activity","type":"related"},{"name":"hydroxy/aromatic amino acid permease activity","type":"related"}],"termid":"GO:0015171","terms_by_termid":{"GO:0000064":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0015171":null,"GO:0015174":null,"GO:0015179":null,"GO:0015182":null,"GO:0015183":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0033229":null,"GO:0034639":null,"GO:0061459":null}}


id: GO:0008811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chloramphenicol + acetyl-CoA = chloramphenicol 3-acetate + CoA.","definition_xrefs":["EC:2.3.1.28","RHEA:18421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"chloramphenicol O-acetyltransferase activity","secondary_identifiers":["MetaCyc:CHLORAMPHENICOL-O-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R03065"],"synonyms":[{"name":"CAT I","type":"related"},{"name":"CAT II","type":"related"},{"name":"CAT III","type":"related"},{"name":"acetyl-CoA:chloramphenicol 3-O-acetyltransferase activity","type":"related"},{"name":"chloramphenicol acetylase activity","type":"related"},{"name":"chloramphenicol acetyltransferase activity","type":"related"},{"name":"chloramphenicol transacetylase activity","type":"related"}],"termid":"GO:0008811"}


id: PBO:0001027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Usp (universal stress protein) family protein, implicated in meiotic chromosome segregation","termid":"PBO:0001027"}


id: PBO:0077367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 106C","termid":"PBO:0077367"}


id: PBO:0072234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 9","termid":"PBO:0072234"}


id: PR:G2TRR1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gem7 gene.","definition_xrefs":["UniProtKB:G2TRR1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem-associated protein 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.16","synonyms":[{"name":"Spom972h-gem7","type":"exact"}],"termid":"PR:G2TRR1"}


id: GO:0046970
data:
  {"annotated_genes":["SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100318],"is_not":false,"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.","definition_xrefs":["GOC:vw","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone deacetylase activity","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H4K16 deacetylase activity","termid":"GO:0034739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0019213","GO:0033558","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"NAD-dependent histone H4K16 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone H4-K16 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0046970","terms_by_termid":{"GO:0046970":null}}


id: GO:1903677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cap-independent translational initiation.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"regulates","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"regulation of cap-independent translational initiation","termid":"GO:1903677"}


id: PBO:0061974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AM member 1 pseudogene","termid":"PBO:0061974"}


id: PBO:0060291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6B antisense RNA 1","termid":"PBO:0060291"}


id: PBO:0045287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 38","termid":"PBO:0045287"}


id: MOD:00759
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"fucosylated biantennary (-1 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Fucosylated biantennary (-1 galactose)","type":"related"},{"name":"dHex(1)Hex(4)HexNAc(4)","type":"related"}],"termid":"MOD:00759"}


id: GO:0072379
data:
  {"annotated_genes":["SJAG_03865","SJAG_01496"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111197,84096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072380"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the post-translational delivery of tail-anchored (TA) membrane proteins to the endoplasmic reticulum. TA membrane proteins, also called type II transmembrane proteins, contain a single C-terminal transmembrane region. Some ER membrane insertion complex subunits are conserved between different species such as mammals and budding yeast.","definition_xrefs":["PMID:20850366","GOC:mah","PMID:20676083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01496":null,"SJAG_03865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"ER membrane insertion complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endoplasmic reticulum membrane insertion complex","type":"exact"}],"termid":"GO:0072379","terms_by_termid":{"GO:0072380":null}}


id: PBO:0031368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_morphology_during_vegetative_growth","termid":"PBO:0031368"}


id: GO:0046477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"},{"relation_name":"is_a","term_name":"glycosphingolipid catabolic process","termid":"GO:0046479"},{"relation_name":"is_a","term_name":"ceramide catabolic process","termid":"GO:0046514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"glycosylceramide catabolic process","synonyms":[{"name":"glycosylceramide breakdown","type":"exact"},{"name":"glycosylceramide catabolism","type":"exact"},{"name":"glycosylceramide degradation","type":"exact"}],"termid":"GO:0046477"}


id: PBO:0005090
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undergoes depletion in translin deficient cells via a translin-dependent proteasome independent pathway","termid":"PBO:0005090"}


id: SO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a tryptophan anticodon, and a 3' tryptophan binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tryptophan_tRNA_primary_transcript","termid":"SO:0000228"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl_tRNA","synonyms":[{"name":"tryptophanyl tRNA","type":"exact"},{"name":"tryptophanyl-transfer RNA","type":"exact"},{"name":"tryptophanyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000271"}


id: PBO:0076994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 9","termid":"PBO:0076994"}


id: PBO:0061154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide adenylyltransferase 2","termid":"PBO:0061154"}


id: GO:0021719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the superior olivary nucleus is generated and organized. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"},{"relation_name":"part_of","term_name":"superior olivary nucleus development","termid":"GO:0021718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus morphogenesis","synonyms":[{"name":"superior olive morphogenesis","type":"related"}],"termid":"GO:0021719"}


id: PBO:0085874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified as a high-copy suppressor of a dbp5 mutation; GFD2 has a paralog, YDR514C, that arose from the whole genome duplication","termid":"PBO:0085874"}


id: GO:0090347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"cellular organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular organohalogen metabolic process","termid":"GO:0090347"}


id: PBO:0087927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transferrin receptor-like protein; functions with Tre1p to regulate ubiquitination and vacuolar degradation of the metal transporter Smf1p; inviability of null mutant in systematic studies is due to proximity to CDC31; TRE2 has a paralog, TRE1, that arose from the whole genome duplication","termid":"PBO:0087927"}


id: GO:0120102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the bacterial-type flagellum that is located at the cytoplasmic side of the MS ring and composed of six membrane proteins (FlhA, FlhB, FliP, FliQ, FliR, and FliO, or orthologs thereof) and three soluble proteins (FliI, FliH, and FliJ, or orthologs thereof) in the cytoplasm. It is responsible for secretion of flagellar type III protein substrates, including the proteins of the flagellar rod, hook, and filament.","definition_xrefs":["GOC:cilia","PMID:24697492","PMID:10572114","PMID:12624192","PMID:25251856","DOI:10.1002/9780470015902.a0000744.pub4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body","termid":"GO:0009425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum secretion apparatus","synonyms":[{"name":"bacterial-type flagellum export apparatus","type":"exact"}],"termid":"GO:0120102"}


id: GO:0060753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mast cell chemotaxis. Mast cell chemotaxis is the movement of a mast cell in response to an external stimulus.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"regulates","term_name":"mast cell chemotaxis","termid":"GO:0002551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell chemotaxis","termid":"GO:0060753"}


id: GO:1901035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-glutamine import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of L-glutamine import across plasma membrane","termid":"GO:1901034"},{"relation_name":"is_a","term_name":"negative regulation of glutamine transport","termid":"GO:2000486"},{"relation_name":"negatively_regulates","term_name":"L-glutamine import across plasma membrane","termid":"GO:1903803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of L-glutamine import across plasma membrane","synonyms":[{"name":"down regulation of L-glutamine import","type":"exact"},{"name":"down regulation of L-glutamine uptake","type":"exact"},{"name":"down-regulation of L-glutamine import","type":"broad"},{"name":"down-regulation of L-glutamine uptake","type":"exact"},{"name":"downregulation of L-glutamine import","type":"exact"},{"name":"downregulation of L-glutamine uptake","type":"exact"},{"name":"inhibition of L-glutamine import","type":"narrow"},{"name":"inhibition of L-glutamine uptake","type":"exact"},{"name":"negative regulation of L-glutamine import","type":"broad"},{"name":"negative regulation of L-glutamine uptake","type":"exact"}],"termid":"GO:1901035"}


id: PBO:0047880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(5)(p13)","termid":"PBO:0047880"}


id: FYPO:0001343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA replication is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abnormal mitotic DNA replication","synonyms":[{"name":"abnormal DNA replication during mitotic cell cycle","type":"exact"},{"name":"abnormal DNA replication during vegetative growth","type":"exact"},{"name":"abnormal DNA-dependent DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0001343"}


id: GO:0180038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin L and cyclin-dependent kinase 11 (CDK11). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:23122962","PMID:32446654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin L-CDK11 complex","synonyms":[{"name":"Cdk11-Cyclin L complex","type":"exact"}],"termid":"GO:0180038"}


id: PBO:0079049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 5-1","termid":"PBO:0079049"}


id: PBO:0108581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, human ATXN10 ortholog","termid":"PBO:0108581"}


id: PBO:0046757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exo/endonuclease G","termid":"PBO:0046757"}


id: PBO:0054591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1994","termid":"PBO:0054591"}


id: PBO:0082826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved phosphatase acting as a metabolite repair enzyme; shows specific dephosphorylating activity on two side-products of central carbohydrate metabolism, 2-phosphoglycolate and 4-phosphoerythronate; alkaline phosphatase specific for p-nitrophenyl phosphate; also has protein phosphatase activity; human ortholog PGP shows similar substrate specificity, deletion causes similar metabolite accumulation phenotypes, suggesting conserved role in eliminating glycolytic byproducts","termid":"PBO:0082826"}


id: GO:0032221
data:
  {"annotated_genes":["SJAG_01804","SJAG_04758","SJAG_00581","SJAG_00349","SJAG_01110","SJAG_03884"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85951,89905,90434,91579,92015,105577],"is_not":false,"summary":null,"term":"GO:0032221"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved histone deacetylase complex which deacetylates histones across gene coding regions. Composed of a catalytic histone deacetylase subunit, a chromodomain protein, a SIN3 family co-repressor, and a WD repeat protein (Clr6p, Alp13p, Pst2p, and Prw1p respectively in Schizosaccharomyces; Rpd3p, Sin3p, Ume1p, Rco1p and Eaf3 in Saccharomyces; homologs thereof in other species).","definition_xrefs":["PMID:12773392","PMID:17450151","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sin3-type complex","termid":"GO:0070822"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00349":null,"SJAG_00581":null,"SJAG_01110":null,"SJAG_01804":null,"SJAG_03884":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005654","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Rpd3S complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000509"],"synonyms":[{"name":"Clr6 histone deacetylase complex II","type":"exact"},{"name":"Clr6 histone deacetylase complex II'","type":"exact"},{"name":"Clr6-CII complex","type":"exact"},{"name":"Clr6S complex","type":"exact"},{"name":"Rpd3C(S)","type":"exact"},{"name":"Rpd3S","type":"exact"},{"name":"Sin3S","type":"exact"}],"termid":"GO:0032221","terms_by_termid":{"GO:0032221":null}}


id: GO:0097506
data:
  {"annotated_genes":["SJAG_02528"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004844"}]},"cv_name":"molecular_function","definition":"DNA N-glycosylase activity acting on deaminated bases.","definition_xrefs":["PMID:18789404","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"deaminated base DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA glycosylase activity acting on deaminated bases","type":"exact"},{"name":"deaminated base DNA glycosylase activity","type":"exact"}],"termid":"GO:0097506","terms_by_termid":{"GO:0004844":null}}


id: PBO:0027449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_spindle_pole_body_morphology_during_meiosis_II","termid":"PBO:0027449"}


id: GO:0051722
data:
  {"annotated_genes":["SJAG_01628"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109576],"is_not":false,"summary":null,"term":"GO:0051722"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: C-terminal protein amino acid methyl ester + H2O = protein amino acid + methanol.","definition_xrefs":["PMID:10318862","PMID:8650216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylesterase activity","termid":"GO:0051723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0140096","GO:0016788"],"is_obsolete":false,"name":"protein C-terminal methylesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8856951"],"synonyms":[{"name":"protein phosphatase methylesterase activity","type":"narrow"}],"termid":"GO:0051722","terms_by_termid":{"GO:0051722":null}}


id: PBO:0036283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate kinase Arg82 (predicted)","termid":"PBO:0036283"}


id: GO:0061703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an assemble of ASC dimers that is capable of inducing pyroptosis.","definition_xrefs":["GOC:dph","PMID:17599095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyroptosome complex","synonyms":[{"name":"ASC pyroptosome","type":"exact"}],"termid":"GO:0061703"}


id: PBO:0056809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 4B","termid":"PBO:0056809"}


id: PBO:0058461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5190","termid":"PBO:0058461"}


id: PBO:0034280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_via_type_III_bouton_to","termid":"PBO:0034280"}


id: PBO:0011076
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defect in REplication","termid":"PBO:0011076"}


id: PBO:0065783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QRSL1 pseudogene 3","termid":"PBO:0065783"}


id: MOD:01154
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid to pyruvic acid.","definition_xrefs":["PubMed:3042771","PubMed:10085076","PubMed:8464063","RESID:AA0127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.0-71.1 Da","termid":"MOD:00769"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Cys)","type":"exact"},{"name":"MOD_RES Pyruvic acid (Ser)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:01154"}


id: GO:0003005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The menstrual cycle process in which one central cavity separating the oocyte/cumulus complex from mural granulosa and theca cells is formed as part of the scattered antral spaces stage of oogenesis.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular fluid formation in ovarian follicle antrum","termid":"GO:0001548"},{"relation_name":"part_of","term_name":"scattered antral spaces stage","termid":"GO:0048163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular fluid formation in ovarian follicle antrum involved in scattered antral spaces stage","synonyms":[{"name":"follicular fluid formation in ovarian follicle antrum during scattered antral spaces stage","type":"related"}],"termid":"GO:0003005"}


id: SO:0000113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A viral sequence which has integrated into a host genome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proviral_region","synonyms":[{"name":"proviral region","type":"exact"},{"name":"proviral sequence","type":"related"}],"termid":"SO:0000113"}


id: GO:0098678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which the range of hosts which a virus can bind and infect is changed. Examples include phages that switch between types of fibers via the action of a virally encoded invertase.","definition_xrefs":["PMID:6232613","VZ:4498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral tropism switching","termid":"GO:0098678"}


id: GO:1904918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-histidine from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["GO_REF:0000078","PMID:22822152","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-histidine transmembrane transport","termid":"GO:0089709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"transmembrane L-histidine transport from lysosomal lumen to cytosol","termid":"GO:1904918"}


id: GO:0006622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the lysosome using signals contained within the protein.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"protein localization to lysosome","termid":"GO:0061462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0006605"],"is_obsolete":false,"name":"protein targeting to lysosome","synonyms":[{"name":"protein-lysosome targeting","type":"exact"}],"termid":"GO:0006622"}


id: PBO:0047305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanyl-tRNA synthetase subunit beta","termid":"PBO:0047305"}


id: PBO:0075787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 9","termid":"PBO:0075787"}


id: GO:0023024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class I major histocompatibility complex.","definition_xrefs":["GOC:vw","GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex binding","termid":"GO:0023023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class I protein complex binding","termid":"GO:0023024"}


id: PBO:0079028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-1","termid":"PBO:0079028"}


id: PBO:0091550
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SBA1","termid":"PBO:0091550"}


id: PATO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence quality inhering in a bearer by virtue of emitting light during exposure to radiation from an external source.","definition_xrefs":["web:www.thefreedictionary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescence","termid":"PATO:0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescent","termid":"PATO:0001290"}


id: GO:2001074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric ureteric bud development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"regulates","term_name":"metanephric part of ureteric bud development","termid":"GO:0035502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric ureteric bud development","termid":"GO:2001074"}


id: PBO:0061658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUMB endocytic adaptor protein","termid":"PBO:0061658"}


id: PBO:0049535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 6","termid":"PBO:0049535"}


id: PBO:0054723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2132","termid":"PBO:0054723"}


id: PBO:0048376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor 1B","termid":"PBO:0048376"}


id: PBO:0050088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 8","termid":"PBO:0050088"}


id: PBO:0042940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin assembly factor 1 subunit A","termid":"PBO:0042940"}


id: PBO:0003347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI domain","termid":"PBO:0003347"}


id: GO:0036392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 20 (CCL20) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 20 production","synonyms":[{"name":"C-C motif chemokine 20 production","type":"exact"},{"name":"CCL-20 production","type":"exact"},{"name":"CCL20 production","type":"exact"}],"termid":"GO:0036392"}


id: PBO:0050120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 30","termid":"PBO:0050120"}


id: PBO:0077794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin family 1 member A","termid":"PBO:0077794"}


id: FYPO:0000487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"increased meiotic recombination","synonyms":[{"name":"meiotic recombination: increased","type":"related"}],"termid":"FYPO:0000487"}


id: PBO:0090525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho1","termid":"PBO:0090525"}


id: PBO:0041919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 3","termid":"PBO:0041919"}


id: PBO:0056623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MED4 antisense RNA 1","termid":"PBO:0056623"}


id: PBO:0038355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_ligand","termid":"PBO:0038355"}


id: GO:1903425
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96938,109855],"is_not":false,"summary":null,"term":"GO:1903425"}]},"cv_name":"molecular_function","definition":"Enables the transfer of fluoride from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GO_REF:0000070","PMID:24173035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"fluoride transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903425","terms_by_termid":{"GO:1903425":null}}


id: PBO:0051270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 1","termid":"PBO:0051270"}


id: GO:0042315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of dipeptides, preferentially hydrophobic dipeptides including prolyl amino acids.","definition_xrefs":["EC:3.4.13.18"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosol nonspecific dipeptidase activity (obsolete GO:0042315)","synonyms":[{"name":"Gly-Leu hydrolase activity","type":"related"},{"name":"L-amino-acyl-L-amino-acid hydrolase activity","type":"related"},{"name":"L-prolylglycine dipeptidase activity","type":"related"},{"name":"N(2)-beta-alanylarginine dipeptidase activity","type":"narrow"},{"name":"N2-beta-alanylarginine dipeptidase activity","type":"related"},{"name":"Pro-X dipeptidase activity","type":"narrow"},{"name":"cytosol non-specific dipeptidase activity","type":"related"},{"name":"cytosol nonspecific dipeptidase activity","type":"exact"},{"name":"diglycinase activity","type":"related"},{"name":"glycyl-L-leucine dipeptidase activity","type":"related"},{"name":"glycyl-L-leucine hydrolase activity","type":"related"},{"name":"glycyl-L-leucine peptidase activity","type":"related"},{"name":"glycyl-glycine dipeptidase activity","type":"narrow"},{"name":"glycyl-leucine dipeptidase activity","type":"narrow"},{"name":"glycylleucine dipeptide hydrolase activity","type":"related"},{"name":"glycylleucine hydrolase activity","type":"related"},{"name":"glycylleucine peptidase activity","type":"related"},{"name":"human cytosolic non-specific dipeptidase activity","type":"related"},{"name":"iminodipeptidase activity","type":"related"},{"name":"non-specific dipeptidase activity","type":"related"},{"name":"peptidase A activity","type":"broad"},{"name":"prolinase activity","type":"narrow"},{"name":"prolyl dipeptidase activity","type":"narrow"},{"name":"prolylglycine dipeptidase activity","type":"narrow"}],"termid":"GO:0042315"}


id: MOD:00110
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine methyl disulfide.","definition_xrefs":["RESID:AA0101","Unimod:39#C","PubMed:2056535","PubMed:163643","PubMed:6381494","OMSSA:179","PubMed:10555576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"methylthiolated residue","termid":"MOD:01153"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine methyl disulfide","synonyms":[{"name":"(2R)-2-amino-3-(methyldisulfanediyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(methyldisulfanediyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(methyldithio)propanoic acid","type":"exact"},{"name":"2-amino-3-methyldisulfanylpropanoic acid","type":"exact"},{"name":"2-azanyl-3-(methyldisulfanediyl)-propanoic acid","type":"exact"},{"name":"Beta-methylthiolation","type":"related"},{"name":"L-3-(methyldithio)alanine","type":"exact"},{"name":"L-cysteine methyl disulfide","type":"exact"},{"name":"MOD_RES Cysteine methyl disulfide","type":"exact"},{"name":"Methylthio","type":"related"},{"name":"S-methylthio-L-cysteine","type":"exact"},{"name":"S-methylthiocysteine","type":"exact"},{"name":"methyl methanethiolsulfonate derivatized cysteine","type":"exact"},{"name":"methyl methanethiosulfonate derivatized cysteine","type":"exact"},{"name":"mmts","type":"exact"}],"termid":"MOD:00110"}


id: FYPO:0006013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the ascus is larger than normal.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascus morphology","termid":"FYPO:0005156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005156"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005156"],"is_obsolete":false,"name":"large ascus","synonyms":[{"name":"enlarged ascus","type":"exact"},{"name":"increased ascus size","type":"exact"},{"name":"large asci","type":"exact"}],"termid":"FYPO:0006013"}


id: SO:0000997
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A portion of a gene that is not the complete gene.","direct_ancestors":[{"relation_name":"has_quality","term_name":"fragmentary","termid":"SO:0000731"},{"relation_name":"is_a","term_name":"gene_component_region","termid":"SO:0000842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_fragment","synonyms":[{"name":"gene fragment","type":"exact"}],"termid":"SO:0000997"}


id: PBO:0002749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic acid transport protein Mae1","termid":"PBO:0002749"}


id: GO:0014885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an injury stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of wounding","termid":"GO:0014822"},{"relation_name":"is_a","term_name":"response to injury involved in regulation of muscle adaptation","termid":"GO:0014876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of injury involved in regulation of muscle adaptation","synonyms":[{"name":"detection of injury involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014885"}


id: PBO:0039022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGA divergent transcript","termid":"PBO:0039022"}


id: FYECO:0000021
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which adenine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited adenine","secondary_identifiers":["PMID:7565608"],"termid":"FYECO:0000021"}


id: FYPO:0006197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, has one nucleus, and has normal length but a greater diameter than normal.","definition_xrefs":["PMID:20805322","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"normal vegetative cell length","termid":"FYPO:0003503"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001312","FYPO:0000257","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable mononucleate vegetative cell, with normal cell length and increased cell diameter","synonyms":[{"name":"inviable mononucleate cell, with normal cell length and increased cell diameter, during vegetative growth","type":"exact"},{"name":"inviable mononucleate vegetative cell, with increased cell diameter and normal cell length","type":"exact"},{"name":"inviable mononucleate vegetative cell, with normal cell length and increased cell diameter during mitotic cell cycle","type":"related"},{"name":"inviable mononucleate vegetative cell, with normal length and increased diameter","type":"exact"},{"name":"inviable swollen mononucleate vegetative cell, with normal cell length","type":"related"},{"name":"lethal; mononucleate vegetative cell, with normal cell length and increased cell diameter","type":"exact"}],"termid":"FYPO:0006197"}


id: PR:Q10329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pre6 gene.","definition_xrefs":["UniProtKB:Q10329","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.16","synonyms":[{"name":"Spom972h-pre6","type":"exact"}],"termid":"PR:Q10329"}


id: GO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate.","definition_xrefs":["PMID:16429326","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"inositol hexakisphosphate 4-kinase activity","termid":"GO:0000830"}


id: GO:0102343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxyicosanoyl-CoA = trans-2-icosenoyl-CoA + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.134"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-arachidoyl-CoA dehydratase activity (obsolete GO:0102343)","termid":"GO:0102343"}


id: PBO:0086977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the Glc7p type-1 protein phosphatase; involved with Reg1p, Glc7p, and Snf1p in regulation of glucose-repressible genes, also involved in glucose-induced proteolysis of maltose permease; REG2 has a paralog, REG1, that arose from the whole genome duplication","termid":"PBO:0086977"}


id: PBO:0003505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Tsr2 (predicted)","termid":"PBO:0003505"}


id: GO:1904261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of basement membrane assembly involved in embryonic body morphogenesis.","definition_xrefs":["PMID:23940118","GOC:als","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix assembly","termid":"GO:1901203"},{"relation_name":"is_a","term_name":"regulation of basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:1904259"},{"relation_name":"positively_regulates","term_name":"basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:2001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of basement membrane assembly involved in embryonic body morphogenesis","synonyms":[{"name":"activation of basement membrane assembly involved in embryonic body morphogenesis","type":"narrow"},{"name":"up regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"up-regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"upregulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"}],"termid":"GO:1904261"}


id: PBO:0067034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 48, pseudogene","termid":"PBO:0067034"}


id: PBO:0028005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_phi-shaped_DNA_mass","termid":"PBO:0028005"}


id: GO:0102405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-taxifolin(1-) + O2 + NADPH(4-) + H+ = (+)-dihydromyricetin + NADP(3-) + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(+)-taxifolin 5'-hydroxylase activity","secondary_identifiers":["RHEA:61116","MetaCyc:RXN-13718"],"termid":"GO:0102405"}


id: PBO:0005169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase activator Mob2","termid":"PBO:0005169"}


id: FYPO:0002877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription does not occur. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished transcription","synonyms":[{"name":"transcription abolished","type":"exact"}],"termid":"FYPO:0002877"}


id: GO:0006423
data:
  {"annotated_genes":["SJAG_00420"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91704],"is_not":false,"summary":null,"term":"GO:0006423"}]},"cv_name":"biological_process","definition":"The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. A cysteinyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a cysteine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00420":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"cysteinyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006423","terms_by_termid":{"GO:0006423":null}}


id: FYPO:0003648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing xanthine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"abolished cell population growth on xanthine nitrogen source","synonyms":[{"name":"abolished growth on xanthine nitrogen source","type":"broad"},{"name":"abolished vegetative cell population growth on xanthine nitrogen source","type":"exact"},{"name":"abolished xanthine utilization","type":"related"},{"name":"cell population growth on xanthine nitrogen source abolished","type":"exact"}],"termid":"FYPO:0003648"}


id: GO:1900032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trichome patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"trichome patterning","termid":"GO:0048629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of trichome patterning","synonyms":[{"name":"regulation of trichome distribution","type":"broad"},{"name":"regulation of trichome pattern biosynthesis","type":"exact"},{"name":"regulation of trichome pattern formation","type":"exact"},{"name":"regulation of trichome pattern specification","type":"related"},{"name":"regulation of trichome spacing","type":"exact"}],"termid":"GO:1900032"}


id: PBO:0049066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 83","termid":"PBO:0049066"}


id: GO:0005363
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"}]},"cv_name":"molecular_function","definition":"Enables the transfer of maltose from one side of a membrane to the other. Maltose is the disaccharide 4-O-alpha-D-glucopyranosyl-D-glucopyranose, an intermediate in the enzymatic breakdown of glycogen and starch.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"maltose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015581","RHEA:33171"],"synonyms":[{"name":"maltose porter activity","type":"exact"}],"termid":"GO:0005363","terms_by_termid":{"GO:0005364":null}}


id: GO:0035748
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the myelin sheath furthest from the axon.","definition_xrefs":["PMID:20237282","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myelin sheath","termid":"GO:0043209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"myelin sheath abaxonal region","termid":"GO:0035748"}


id: GO:0036156
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Inner arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes. The structure of inner dynein arms is complex and may vary within the axoneme. Inner dynein arms are heteromeric, comprising 8 different heavy chains and various subunits. Inner and outer dynein arms have different functions in the generation of microtubule-based motility.","definition_xrefs":["PMID:7962092","GOC:BHF","PMID:19347929","PMID:2557057","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex","termid":"GO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"inner dynein arm","synonyms":[{"name":"inner dynein arm complex","type":"exact"}],"termid":"GO:0036156"}


id: PBO:0091951
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human protein phosphatase B' delta","termid":"PBO:0091951"}


id: FYPO:0001083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered polysaccharide level during vegetative growth","termid":"FYPO:0001085"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased polysaccharide level during vegetative growth","synonyms":[{"name":"increased cellular polysaccharide level during vegetative growth","type":"exact"},{"name":"increased polysaccharide accumulation during vegetative growth","type":"related"},{"name":"increased polysaccharide level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001083"}


id: PBO:0113485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor required for the mating response; subunit of the mRNA m6A methyltransferase (MIS) complex, regulating meiosis at multiple steps, early prior to pre-meiotic S phase and late during the completion of meiosis and sporulation; exists in two forms, a slower-migrating form abundant during vegetative growth and a faster-migrating pheromone-induced form; null mutant exhibits abnormal lipid metabolic phenotype; homologous to human METTL14, a subunit of a m6A methyltransferase complex","termid":"PBO:0113485"}


id: GO:0030099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell differentiation","termid":"GO:0030099"}


id: GO:0098914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the atrial cardiomyocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:dph","GOC:mtg_cardiac_conduct_nov11","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"is_a","term_name":"atrial cardiac muscle cell membrane repolarization","termid":"GO:0099624"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane repolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"atrial repolarization","type":"related"},{"name":"electrocardiogram QRS complex","type":"related"}],"termid":"GO:0098914"}


id: GO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of branched chain amino acids to produce branched chain alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When methionine is used as the substrate, 3-methylthiopropanol is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to alcohol via Ehrlich pathway","termid":"GO:0000947"},{"relation_name":"is_a","term_name":"methionine catabolic process","termid":"GO:0009087"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methionine catabolic process to 3-methylthiopropanol","termid":"GO:0000951"}


id: GO:2001064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cellooligosaccharide binding","termid":"GO:2001064"}


id: PBO:0109297
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon-optimization decreases protein concentration","termid":"PBO:0109297"}


id: GO:0090059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the protoxylem over time, from its formation to the mature structure. The protoxylem comprises the first formed elements of the primary xylem.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem development","termid":"GO:0010089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoxylem development","termid":"GO:0090059"}


id: FYPO:0005443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of hydrolysis of peptide bonds within a protein is decreased. All proteolysis may be affected, or only cleavage of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"},{"relation_name":"is_a","term_name":"decreased proteolysis","termid":"FYPO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"decreased proteolysis during vegetative growth","synonyms":[{"name":"decreased peptidolysis during vegetative growth","type":"exact"},{"name":"decreased protein cleavage during vegetative growth","type":"related"},{"name":"decreased proteolysis during mitotic cell cycle","type":"related"},{"name":"reduced proteolysis during vegetative growth","type":"exact"}],"termid":"FYPO:0005443"}


id: GO:0071716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of leukotrienes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Leukotrienes are linear C20 endogenous metabolites of arachidonic acid (icosa-5,8,11,14-tetraenoic acid) containing a terminal carboxy function and four or more double bonds (three or more of which are conjugated) as well as other functional groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"leukotriene transport","termid":"GO:0071716"}


id: PBO:0030057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss_during_vegetative_growth","termid":"PBO:0030057"}


id: SO:0001450
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A positively charged, hydorophilic amino acid encoded by the codons AAA and AAG.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine","synonyms":[{"name":"K","type":"exact"},{"name":"Lys","type":"exact"}],"termid":"SO:0001450"}


id: PBO:0045933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor like GTPase 1","termid":"PBO:0045933"}


id: PBO:0091578
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bioneer strain is only N-terminal deleted","termid":"PBO:0091578"}


id: PBO:0043167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis associated kinase 1","termid":"PBO:0043167"}


id: GO:1990523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of bone following its loss or destruction.","definition_xrefs":["PMID:25257467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone regeneration","termid":"GO:1990523"}


id: GO:0075345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent alteration by an organism of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host protein (obsolete GO:0075345)","termid":"GO:0075345"}


id: PBO:0017807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease type C2 protein hE1 homolog Npc2 (predicted)","termid":"PBO:0017807"}


id: PBO:0089348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sorting and assembly machinery complex subunit Sam50","termid":"PBO:0089348"}


id: GO:1900540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"fumonisin metabolic process","termid":"GO:1900539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"fumonisin catabolic process","synonyms":[{"name":"fumonisin breakdown","type":"exact"},{"name":"fumonisin catabolism","type":"exact"},{"name":"fumonisin degradation","type":"related"}],"termid":"GO:1900540"}


id: PBO:0001552
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor for activated protein Kinase of S. Pombe","termid":"PBO:0001552"}


id: PATO:0000687
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000687 relative rate value (obsolete PATO:0000687)","termid":"PATO:0000687"}


id: PBO:0026636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phospholipid_binding","termid":"PBO:0026636"}


id: PBO:0052465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF11 divergent transcript","termid":"PBO:0052465"}


id: PBO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine kinase Mak2","termid":"PBO:0002325"}


id: PBO:0049069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 85","termid":"PBO:0049069"}


id: PBO:0041670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein pseudogene 3","termid":"PBO:0041670"}


id: GO:0046985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of hemoglobin biosynthetic process","termid":"GO:0046984"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"hemoglobin biosynthetic process","termid":"GO:0042541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemoglobin biosynthetic process","synonyms":[{"name":"activation of hemoglobin biosynthetic process","type":"narrow"},{"name":"positive regulation of haemoglobin biosynthesis","type":"exact"},{"name":"positive regulation of haemoglobin biosynthetic process","type":"exact"},{"name":"positive regulation of hemoglobin anabolism","type":"exact"},{"name":"positive regulation of hemoglobin biosynthesis","type":"exact"},{"name":"positive regulation of hemoglobin formation","type":"exact"},{"name":"positive regulation of hemoglobin synthesis","type":"exact"},{"name":"stimulation of hemoglobin biosynthetic process","type":"narrow"},{"name":"up regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"up-regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"upregulation of hemoglobin biosynthetic process","type":"exact"}],"termid":"GO:0046985"}


id: PBO:0026852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_long_terminal_repeat","termid":"PBO:0026852"}


id: GO:0018912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,4-dichlorobenzene (p-dichlorobenzene or paramoth), a derivative of benzene with two chlorine atoms attached at opposite positions on the ring. It forms white crystals at room temperature and is used as an insecticidal fumigant, particularly in mothballs.","direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,4-dichlorobenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:dcz"],"synonyms":[{"name":"1,4-dichlorobenzene metabolism","type":"exact"}],"termid":"GO:0018912"}


id: PBO:0069586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 860, pseudogene","termid":"PBO:0069586"}


id: PBO:0045120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMRT like family C1","termid":"PBO:0045120"}


id: GO:0043801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribulose 5-phosphate + formaldehyde = D-arabino-3-hexulose 6-phosphate.","definition_xrefs":["PMID:16075199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"hexulose-6-phosphate synthase activity","secondary_identifiers":["MetaCyc:R10-RXN","EC:4.1.2.43","RHEA:25201"],"termid":"GO:0043801"}


id: PBO:0078454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 6 (pseudogene)","termid":"PBO:0078454"}


id: GO:1901347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of secondary cell wall biogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell wall organization or biogenesis","termid":"GO:1903339"},{"relation_name":"is_a","term_name":"regulation of secondary cell wall biogenesis","termid":"GO:2000652"},{"relation_name":"negatively_regulates","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"negative regulation of secondary cell wall biogenesis","synonyms":[{"name":"down regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"down regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"down regulation of secondary cell wall anabolism","type":"broad"},{"name":"down regulation of secondary cell wall biogenesis","type":"exact"},{"name":"down regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"down regulation of secondary cell wall formation","type":"broad"},{"name":"down regulation of secondary cell wall synthesis","type":"broad"},{"name":"down-regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"down-regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"down-regulation of secondary cell wall anabolism","type":"broad"},{"name":"down-regulation of secondary cell wall biogenesis","type":"exact"},{"name":"down-regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"down-regulation of secondary cell wall formation","type":"broad"},{"name":"down-regulation of secondary cell wall synthesis","type":"broad"},{"name":"downregulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"downregulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"downregulation of secondary cell wall anabolism","type":"broad"},{"name":"downregulation of secondary cell wall biogenesis","type":"exact"},{"name":"downregulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"downregulation of secondary cell wall formation","type":"broad"},{"name":"downregulation of secondary cell wall synthesis","type":"broad"},{"name":"inhibition of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"inhibition of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"inhibition of secondary cell wall anabolism","type":"broad"},{"name":"inhibition of secondary cell wall biogenesis","type":"narrow"},{"name":"inhibition of secondary cell wall biosynthetic process","type":"broad"},{"name":"inhibition of secondary cell wall formation","type":"broad"},{"name":"inhibition of secondary cell wall synthesis","type":"broad"},{"name":"negative regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"negative regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"negative regulation of secondary cell wall anabolism","type":"broad"},{"name":"negative regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"negative regulation of secondary cell wall formation","type":"broad"},{"name":"negative regulation of secondary cell wall synthesis","type":"broad"}],"termid":"GO:1901347"}


id: _global:produces
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"produces","secondary_identifiers":["RO:0003000"],"termid":"_global:produces"}


id: GO:0070329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The substitution of a selenium atom for a sulfur atom in a ribonucleotide in a tRNA molecule.","definition_xrefs":["PMID:14594807","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium compound metabolic process","termid":"GO:0001887"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA seleno-modification","synonyms":[{"name":"tRNA base modification to selenouridine","type":"exact"}],"termid":"GO:0070329"}


id: GO:0180009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: basic L-amino acid(in) + neutral L-amino acid(out) = basic L-amino acid(in) + neutral L-amino acid(out).","definition_xrefs":["PMID:8663357","PMID:23506863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"broad specificity neutral L-amino acid:basic L-amino acid antiporter activity","synonyms":[{"name":"neutral L-amino acid:cationic L-amino acid antiporter activity","type":"exact"},{"name":"neutral L-amino acid:dibasic L-amino acid antiporter activity","type":"exact"},{"name":"neutral L-amino acid:positively-charged polar L-amino acid antiporter activity","type":"exact"},{"name":"system b(0,+)-type activity","type":"related"}],"termid":"GO:0180009"}


id: PBO:0029345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_tRNA_level","termid":"PBO:0029345"}


id: PBO:0076476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter 1, ATP binding cassette subfamily B member","termid":"PBO:0076476"}


id: GO:0090502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA phosphodiester bond hydrolysis, endonucleolytic (obsolete GO:0090502)","termid":"GO:0090502"}


id: GO:2000579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATP-dependent microtubule motor activity, minus-end-directed.","definition_xrefs":["GOC:kmv","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of microtubule motor activity, minus-end-directed (obsolete GO:2000579)","synonyms":[{"name":"positive regulation of ATP-dependent microtubule motor activity, minus-end-directed","type":"exact"},{"name":"positive regulation of kinesin ATP phosphohydrolase (minus-end-directed)","type":"exact"},{"name":"positive regulation of minus-end-directed kinesin ATPase activity","type":"exact"},{"name":"positive regulation of minus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000579"}


id: PBO:0030576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_methionine_level","termid":"PBO:0030576"}


id: PATO:0000731
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000731 body position value (obsolete PATO:0000731)","termid":"PATO:0000731"}


id: PBO:0078451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 4","termid":"PBO:0078451"}


id: PBO:0030301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_actin_cortical_patch_localization_to_old_end","termid":"PBO:0030301"}


id: PBO:0041481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 87","termid":"PBO:0041481"}


id: PBO:0027563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_during_meiosis","termid":"PBO:0027563"}


id: SO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_secondary_structure","synonyms":[{"name":"INSDC_feature:misc_structure","type":"exact"},{"name":"sequence secondary structure","type":"exact"}],"termid":"SO:0000002"}


id: PBO:0077132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIPARP antisense RNA 1","termid":"PBO:0077132"}


id: GO:0006296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The endonucleolytic cleavage of the damaged strand of DNA 5' to the site of damage. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. The incision follows the incision formed 3' to the site of damage.","definition_xrefs":["PMID:10197977","GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA incision, 5'-to lesion (obsolete GO:0006296)","synonyms":[{"name":"nucleotide-excision repair, DNA incision, 5' to lesion","type":"exact"}],"termid":"GO:0006296"}


id: GO:0030803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclic nucleotide biosynthetic process (obsolete GO:0030803)","synonyms":[{"name":"down regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"inhibition of cyclic nucleotide biosynthetic process","type":"narrow"},{"name":"negative regulation of cyclic nucleotide anabolism","type":"exact"},{"name":"negative regulation of cyclic nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of cyclic nucleotide formation","type":"exact"},{"name":"negative regulation of cyclic nucleotide synthesis","type":"exact"}],"termid":"GO:0030803"}


id: PBO:0038393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiplicity","termid":"PBO:0038393"}


id: PBO:0073081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex assembly factor 1","termid":"PBO:0073081"}


id: GO:1990544
data:
  {"annotated_genes":["SJAG_00612","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98974,107005],"is_not":false,"summary":null,"term":"GO:1990544"}]},"cv_name":"biological_process","definition":"The process in which ATP is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:18485069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transport","termid":"GO:0015867"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"mitochondrial ATP transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990544","terms_by_termid":{"GO:1990544":null}}


id: PR:Q9USQ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syj2 gene.","definition_xrefs":["UniProtKB:Q9USQ6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 5-phosphatase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.13","synonyms":[{"name":"Spom972h-syj2","type":"exact"},{"name":"synaptojanin-like protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USQ6"}


id: PBO:0055640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3079","termid":"PBO:0055640"}


id: PR:Q9URW7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URW7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ696.01c","synonyms":[{"name":"Spom972h-vps17","type":"exact"}],"termid":"PR:Q9URW7"}


id: GO:0071557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from lysine at position 27 of the histone.","definition_xrefs":["GOC:sp","PMID:20023638"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 demethylation (obsolete GO:0071557)","synonyms":[{"name":"H3K27 demethylation","type":"related"}],"termid":"GO:0071557"}


id: GO:0080073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a coumaroyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"spermidine:coumaroyl CoA N-acyltransferase activity","termid":"GO:0080073"}


id: PBO:0077871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 2","termid":"PBO:0077871"}


id: PBO:0058512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5701-2","termid":"PBO:0058512"}


id: GO:1904969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a slow muscle cell from one site to another.","definition_xrefs":["GO_REF:0000091","GOC:TermGenie","PMID:14667409","PMID:15572133","PMID:25534553","GOC:ymb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell migration","termid":"GO:0110122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"slow muscle cell migration","synonyms":[{"name":"slow-twitch muscle cell migration","type":"exact"}],"termid":"GO:1904969"}


id: GO:0002761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid leukocyte differentiation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell differentiation","termid":"GO:0045637"},{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"regulates","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"}


id: PBO:0045860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 50","termid":"PBO:0045860"}


id: FYPO:0005744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein transport","termid":"FYPO:0005744"}


id: PBO:0042232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 4 (pseudogene)","termid":"PBO:0042232"}


id: GO:0019675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition or removal of a phosphate group from nicotinamide adenine dinucleotide (NAD), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.","definition_xrefs":["GOC:jl","ISBN:0618254153"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD phosphorylation and dephosphorylation (obsolete GO:0019675)","synonyms":[{"name":"NAD phosphorylation and dephosphorylation","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphorylation and dephosphorylation","type":"exact"}],"termid":"GO:0019675"}


id: PBO:0050013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, A","termid":"PBO:0050013"}


id: PBO:0051440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-25","termid":"PBO:0051440"}


id: MOD:01832
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 5x(13)C-labeled residue.","definition_xrefs":["PubMed:12771378","Unimod:772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled residue","synonyms":[{"name":"13C(5) Silac label","type":"related"},{"name":"Label:13C(5)","type":"related"}],"termid":"MOD:01832"}


id: GO:0001686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal dynein light chain (obsolete GO:0001686)","synonyms":[{"name":"axonemal dynein light chain","type":"exact"}],"termid":"GO:0001686"}


id: GO:0048148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of a cocaine stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to cocaine","termid":"GO:0042220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to cocaine","synonyms":[{"name":"behavioural response to cocaine","type":"exact"}],"termid":"GO:0048148"}


id: PBO:0109813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Mdm31, mitochondrion inheritance factor, interacts with ERMES","termid":"PBO:0109813"}


id: PBO:0061341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPL pseudogene 1","termid":"PBO:0061341"}


id: GO:0102374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ursolic aldehyde + NADPH + O2 + H+ = ursolic acid + NADP + H2O.","definition_xrefs":["GOC:pz","PMID:22039103"],"gene_count":0,"genotype_count":0,"name":"obsolete ursolic aldehyde 28-monooxygenase activity (obsolete GO:0102374)","termid":"GO:0102374"}


id: PBO:0083587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YDR535C is not an essential gene","termid":"PBO:0083587"}


id: GO:1990324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXVI) chains.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XXVI trimer","termid":"GO:1990324"}


id: GO:0034404
data:
  {"annotated_genes":["SJAG_01859","SJAG_06634","SJAG_00044","SJAG_05029","SJAG_00694","SJAG_03096","SJAG_04264","SJAG_01070","SJAG_01781","SJAG_00134","SJAG_02179","SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[112942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[104609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[104610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[104611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[94712,94713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[111942,85933,89884,89662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[109931,93872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[108025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleobase-containing small molecule: a nucleobase, a nucleoside, or a nucleotide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound biosynthetic process","termid":"GO:0034654"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_01070":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_05029":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleobase-containing small molecule biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase, nucleoside and nucleotide anabolism","type":"exact"},{"name":"nucleobase, nucleoside and nucleotide biosynthesis","type":"exact"},{"name":"nucleobase, nucleoside and nucleotide formation","type":"exact"},{"name":"nucleobase, nucleoside and nucleotide synthesis","type":"exact"}],"termid":"GO:0034404","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0043097":null,"GO:0043174":null,"GO:0046086":null,"GO:0046132":null,"GO:0071590":null,"GO:0071592":null}}


id: PBO:0074998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-9","termid":"PBO:0074998"}


id: GO:0051390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase kinase kinase (MAPKKK).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPKKK activity (obsolete GO:0051390)","synonyms":[{"name":"inactivation of MAP kinase kinase kinase activity","type":"exact"},{"name":"termination of MAP kinase kinase kinase activity","type":"exact"},{"name":"termination of MAPKKK activity","type":"exact"}],"termid":"GO:0051390"}


id: GO:0051113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient adenylylation of peptidyl-histidine to form 1'-(phospho-5'-adenosine)-L-histidine (otherwise known as tau-AMP-histidine, tele-AMP-histidine).","definition_xrefs":["RESID:AA0371"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 1'-(phospho-5'-adenosine)-L-histidine (obsolete GO:0051113)","termid":"GO:0051113"}


id: PBO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by MBF complex","termid":"PBO:0001302"}


id: GO:0010810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:tb","GOC:pf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-substrate adhesion","termid":"GO:0010810"}


id: PBO:0087630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the DSC ubiquitin ligase complex; golgi-localized RING-finger ubiquitin ligase (E3) involved in sorting polar transmembrane domain containing membrane proteins to multivesicular bodies for delivery to the vacuole; proposed involvement in the quality control of misfolded TMD containing proteins; ortholog of fission yeast dsc1","termid":"PBO:0087630"}


id: GO:0047959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + H2O + 2 ferricytochrome c = glyoxylate + NH3 + 2 ferrocytochrome c.","definition_xrefs":["MetaCyc:GLYCINE-DEHYDROGENASE-CYTOCHROME-RXN","EC:1.4.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, cytochrome as acceptor","termid":"GO:0016640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycine dehydrogenase (cytochrome) activity","secondary_identifiers":["RHEA:16909"],"synonyms":[{"name":"glycine-cytochrome c reductase activity","type":"related"},{"name":"glycine:ferricytochrome-c oxidoreductase (deaminating)","type":"related"},{"name":"reductase, glycine-cytochrome c","type":"related"}],"termid":"GO:0047959"}


id: GO:0097525
data:
  {"annotated_genes":["SJAG_01301","SJAG_02843","SJAG_04433","SJAG_00498","SJAG_02295","SJAG_01870","SJAG_01327","SJAG_00989","SJAG_00322","SJAG_03410","SJAG_03469","SJAG_00531","SJAG_03369","SJAG_02304","SJAG_04163","SJAG_03547","SJAG_00504","SJAG_00474","SJAG_01452","SJAG_03210","SJAG_00313","SJAG_04911","SJAG_05235","SJAG_00058","SJAG_04230","SJAG_01015","SJAG_04318","SJAG_04538","SJAG_01547","SJAG_05208","SJAG_04529","SJAG_02469","SJAG_03070","SJAG_02185","SJAG_02279","SJAG_01654","SJAG_04497","SJAG_00643","SJAG_03983","SJAG_04079","SJAG_00539","SJAG_01634","SJAG_03214","SJAG_01440","SJAG_03954","SJAG_04405","SJAG_04214","SJAG_01308","SJAG_00278","SJAG_05009","SJAG_00147","SJAG_01819","SJAG_04222","SJAG_00577","SJAG_05240","SJAG_00414","SJAG_03245","SJAG_01008","SJAG_02455","SJAG_03460"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87690,103045,91734,98825,106173,93967,91051,91305,106737,90129,108476,106756,98660,101971,106766,109388,111348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005685"},{"annotations":[108558,98759,111038,91954,101617,105614,108991,101972,104641,92462,98661,112510,91735,102863,91052,91306,102441,98535,90295,102536,103994,108763,106174,111970,106738,89492,91464,89164,97857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005686"},{"annotations":[98304,91308,98663,101974,91054,106740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005687"},{"annotations":[89433,94147,98664,101931,106175,110466,85687,96745,108992,98305,89068,91679,106741,111039,107241,104642,91309,102652,94912,102442,107813,110965,89229,111311,112512,101975,91737,91055,91955,111971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046540"},{"annotations":[93539,91056,110467,98665,101976,91956,96746,104643,98820,108359,91738,111040,111972,94148,102443,102653,108993,106742,113912,91310,112513,111312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005682"},{"annotations":[108994,111973,104644,101591,91957,111041,112514,102444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005688"}]},"cv_name":"cellular_component","definition":"A small ribonucleoprotein complex involved in formation of the spliceosome.","definition_xrefs":["ISBN:0879695897","GOC:pr","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small nuclear ribonucleoprotein complex","termid":"GO:0030532"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00278":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00531":null,"SJAG_00539":null,"SJAG_00577":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01440":null,"SJAG_01452":null,"SJAG_01547":null,"SJAG_01634":null,"SJAG_01654":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03214":null,"SJAG_03245":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_03983":null,"SJAG_04079":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04318":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05208":null,"SJAG_05235":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"spliceosomal snRNP complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097525","terms_by_termid":{"GO:0005682":null,"GO:0005685":null,"GO:0005686":null,"GO:0005687":null,"GO:0005688":null,"GO:0046540":null}}


id: PBO:0006178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_direct_regulator","termid":"PBO:0006178"}


id: GO:1903785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-valine across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:20944394","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"valine transport","termid":"GO:0015829"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-valine transmembrane transport","termid":"GO:1903785"}


id: GO:0099572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins within and adjacent to the postsynaptic membrane. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["PMID:22046028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle","termid":"GO:0043226"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization","termid":"GO:0099572"}


id: PBO:0084705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial hsp70-type molecular chaperone; required for assembly of iron/sulfur clusters into proteins at a step after cluster synthesis; involved in maturation of Grx5p and Yfh1p, which is a homolog of human frataxin implicated in Friedreich's ataxia","termid":"PBO:0084705"}


id: PBO:0066323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and CCCH-type domains 1","termid":"PBO:0066323"}


id: GO:0030372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a high molecular weight B cell growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"high molecular weight B cell growth factor receptor binding","synonyms":[{"name":"high molecular weight B cell growth factor receptor ligand","type":"narrow"},{"name":"high molecular weight B lymphocyte growth factor receptor binding","type":"exact"},{"name":"high molecular weight B-cell growth factor receptor binding","type":"exact"},{"name":"high molecular weight B-lymphocyte growth factor receptor binding","type":"exact"}],"termid":"GO:0030372"}


id: GO:0018445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of prothoracicotrophic hormone, a peptide hormone that is secreted by the brain and, upon receptor binding, acts on the prothoracic gland to stimulate the release of ecdysone in insects.","definition_xrefs":["GOC:mah","PMID:3301403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"prothoracicotrophic hormone activity","termid":"GO:0018445"}


id: FYPO:0005182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased when the cell is exposed to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein degradation during cellular response to UV","synonyms":[{"name":"decreased protein breakdown during cellular response to UV","type":"exact"},{"name":"decreased protein catabolic process during cellular response to UV","type":"exact"},{"name":"decreased protein catabolism during cellular response to UV","type":"exact"},{"name":"decreased protein degradation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"decreased protein degradation during cellular response to UV during vegetative growth","type":"exact"},{"name":"decreased protein degradation during cellular response to ultraviolet light","type":"exact"},{"name":"reduced protein degradation during cellular response to UV","type":"exact"}],"termid":"FYPO:0005182"}


id: GO:0071810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of fever generation via regulation of the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fever generation","termid":"GO:0031620"},{"relation_name":"is_a","term_name":"regulation of prostaglandin secretion","termid":"GO:0032306"},{"relation_name":"regulates","term_name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of fever generation by regulation of prostaglandin secretion","termid":"GO:0071810"}


id: PBO:0034601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_iron_ion_binding","termid":"PBO:0034601"}


id: PBO:0034490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_segregation_during_meiosis_I_with_split_kinetochore,_lagging_chromosomes,_and_normal_chromosome_separation","termid":"PBO:0034490"}


id: PBO:0076872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 21, pseudogene","termid":"PBO:0076872"}


id: GO:0140569
data:
  {"annotated_genes":["SJAG_01435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97130],"is_not":false,"summary":null,"term":"GO:0140569"}]},"cv_name":"biological_process","definition":"The removal of a mislocalized protein from the endoplasmic reticulum (ER) membrane.","definition_xrefs":["PMID:32973005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraction of mislocalized protein from membrane","termid":"GO:0140568"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"extraction of mislocalized protein from ER membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140569","terms_by_termid":{"GO:0140569":null}}


id: PBO:0036380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin Aly1 related Aly1","termid":"PBO:0036380"}


id: GO:0071172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydromonapterin + NADPH = tetrahydromonapterin + NADP+.","definition_xrefs":["PMID:19897652","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dihydromonapterin reductase activity","termid":"GO:0071172"}


id: PBO:0052672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 40","termid":"PBO:0052672"}


id: FYPO:0002852
data:
  {"alleles_by_uniquename":{"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04280":null,"SJAG_04522":null},"genotype_count":1,"genotypes_by_uniquename":{"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to cell tip during vegetative growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"increased protein localization to cell end during vegetative growth","type":"exact"},{"name":"increased protein localization to cell tip during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002852","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null}}


id: PBO:0047764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FosB proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0047764"}


id: PBO:0045985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHMT2 and SLC44A4 antisense RNA 1","termid":"PBO:0045985"}


id: GO:0070620
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the epidermal growth factor receptor (EGFR), Grb2 and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway.","definition_xrefs":["PMID:8940013","PMID:7798267","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"EGFR-Grb2-Sos complex","synonyms":[{"name":"Egfr-Grb2-mSos1 complex, EGF stimulated","type":"narrow"}],"termid":"GO:0070620"}


id: GO:0160144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by GDF15 binding to GFRAL coreceptor, triggering RET autophosphorylation and activation, in response to stress.","definition_xrefs":["PMID:33593916","PMID:37437602","PMID:30639358","PMID:31535977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"glial cell-derived neurotrophic factor receptor signaling pathway","termid":"GO:0035860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"GDF15-GFRAL signaling pathway","termid":"GO:0160144"}


id: GO:0042362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"vitamin biosynthetic process","termid":"GO:0009110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"fat-soluble vitamin biosynthetic process","synonyms":[{"name":"fat-soluble vitamin anabolism","type":"exact"},{"name":"fat-soluble vitamin biosynthesis","type":"exact"},{"name":"fat-soluble vitamin formation","type":"exact"},{"name":"fat-soluble vitamin synthesis","type":"exact"}],"termid":"GO:0042362"}


id: PBO:0057236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 423","termid":"PBO:0057236"}


id: PR:Q9C118
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.23c gene.","definition_xrefs":["UniProtKB:Q9C118","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1687.23c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.23c","synonyms":[{"name":"Spom972h-SPAC1687.23c","type":"exact"}],"termid":"PR:Q9C118"}


id: GO:0031295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte costimulation","termid":"GO:0031294"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"T cell costimulation","synonyms":[{"name":"T cell co-stimulation","type":"exact"},{"name":"T lymphocyte costimulation","type":"exact"},{"name":"T-cell co-stimulation","type":"exact"},{"name":"T-cell costimulation","type":"exact"},{"name":"T-lymphocyte costimulation","type":"exact"}],"termid":"GO:0031295"}


id: GO:0098734
data:
  {"annotated_genes":["SJAG_02056","SJAG_02268","SJAG_00774"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[56989,60825,60826,68675,105110],"is_not":false,"summary":null,"term":"GO:0098734"}]},"cv_name":"biological_process","definition":"The removal of palymitoyl groups from a macromolecule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule deacylation","termid":"GO:0098732"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macromolecule depalmitoylation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0098734","terms_by_termid":{"GO:0098734":null}}


id: GO:0099103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Direct interaction with a channel (binding or modification), resulting in its opening. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"},{"relation_name":"is_a","term_name":"transporter activator activity","termid":"GO:0141109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"channel activator activity","synonyms":[{"name":"channel gating activity","type":"exact"}],"termid":"GO:0099103"}


id: PBO:0065723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWP2 small subunit processome component","termid":"PBO:0065723"}


id: PBO:0065859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB17, member RAS oncogene family","termid":"PBO:0065859"}


id: GO:0045893
data:
  {"annotated_genes":["SJAG_01199","SJAG_04647","SJAG_03735","SJAG_01403","SJAG_00163","SJAG_02474","SJAG_00766","SJAG_00164","SJAG_00150","SJAG_04820","SJAG_02849","SJAG_00269","SJAG_04712","SJAG_01771","SJAG_04855","SJAG_03590","SJAG_04813","SJAG_01952","SJAG_04388","SJAG_01916","SJAG_02311","SJAG_02255","SJAG_01778","SJAG_02406","SJAG_04611","SJAG_06599","SJAG_01583","SJAG_03967","SJAG_03118","SJAG_03421","SJAG_01150","SJAG_01149","SJAG_01441","SJAG_04092","SJAG_00342","SJAG_02810","SJAG_01740","SJAG_02326","SJAG_00266","SJAG_00156","SJAG_04009","SJAG_01151","SJAG_05153","SJAG_03289","SJAG_00210","SJAG_04749","SJAG_01243","SJAG_03879","SJAG_05313","SJAG_02730","SJAG_01307","SJAG_03981","SJAG_03573","SJAG_02252","SJAG_02218","SJAG_00641","SJAG_00698","SJAG_00802","SJAG_02723","SJAG_01805","SJAG_01205","SJAG_03519","SJAG_03501","SJAG_01113","SJAG_04249","SJAG_01694","SJAG_02773","SJAG_03061","SJAG_02415","SJAG_02494","SJAG_00909","SJAG_00987","SJAG_04421","SJAG_02608","SJAG_03143","SJAG_00693","SJAG_04099","SJAG_05343","SJAG_02391","SJAG_05187","SJAG_03346","SJAG_03622","SJAG_06576","SJAG_02551","SJAG_02138","SJAG_04755","SJAG_06638","SJAG_03484","SJAG_03126","SJAG_03183","SJAG_03067","SJAG_00613","SJAG_02671","SJAG_04036","SJAG_04839","SJAG_01062","SJAG_02196","SJAG_02956","SJAG_00904","SJAG_04551","SJAG_01764","SJAG_05247","SJAG_04191","SJAG_05203","SJAG_00973","SJAG_02938","SJAG_00297","SJAG_04206","SJAG_04705","SJAG_03241","SJAG_03538","SJAG_05288","SJAG_01213","SJAG_02472","SJAG_02057","SJAG_05341","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108031],"is_not":false,"summary":null,"term":"GO:0045893"},{"annotations":[104984,107024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[84134,102764,85617,89618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[111291,85865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[108072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[88174,106681,113092,103073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"},{"annotations":[84391,107025,94554,93653,98395,99283,109796,69843,98813,107990,62598,90504,62347,89839,86248,93655,108405,114139,115154,68746,83764,89936,105430,91211,98349,90468,102211,98978,104915,84202,106837,108032,110685,91827,93435,112577,65586,93656,103688,104566,96601,104080,67855,90870,100882,112180,113462,114302,67810,111112,93654,110194,64522,105804,95620,75382,101938,89413,96612,91937,109747,60613,93657,113574,61469,84332,105158,94704,105295,113085,83592,87540,107860,112385,113093,104686,85200,88869,104745,110939,92415,100554,105465,95415,98268,103160,91663,115155,106977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045944"},{"annotations":[111399,102143,101466,91938,105146,113094,99174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[102337,111400,86829,90580,91513,94801,83627,91994,90469,101793,86519,102469,104859,99539,99800,102144,105147,114998,110836,98076,95148,104832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any 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DNA-dependent","type":"exact"},{"name":"up-regulation of gene-specific transcription","type":"related"},{"name":"up-regulation of transcription, DNA-dependent","type":"exact"},{"name":"upregulation of gene-specific transcription","type":"related"},{"name":"upregulation of transcription, DNA-dependent","type":"exact"}],"termid":"GO:0045893","terms_by_termid":{"GO:0032786":null,"GO:0032968":null,"GO:0045893":null,"GO:0045899":null,"GO:0045943":null,"GO:0045944":null,"GO:0060261":null,"GO:0060963":null,"GO:1904595":null}}


id: FYPO:0004395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is shorter than normal during metaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short bipolar mitotic spindle","termid":"FYPO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0002399","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"short bipolar mitotic spindle during metaphase","synonyms":[{"name":"decreased mitotic spindle length during metaphase","type":"exact"},{"name":"short mitotic spindle during metaphase","type":"exact"},{"name":"short mitotic spindle during metaphase during vegetative growth","type":"exact"},{"name":"short mitotic spindles during metaphase","type":"exact"},{"name":"short spindle during mitotic metaphase","type":"exact"}],"termid":"FYPO:0004395"}


id: PBO:0071302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 25","termid":"PBO:0071302"}


id: GO:0106256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A hydroperoxy icosatetraenoate = an oxoicosatetraenoate + H2O.","definition_xrefs":["PMID:12881489","RHEA:55556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroperoxy icosatetraenoate dehydratase activity","secondary_identifiers":["EC:4.2.1.152"],"termid":"GO:0106256"}


id: GO:0051232
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97546],"is_not":false,"summary":null,"term":"GO:0051232"}]},"cv_name":"biological_process","definition":"The lengthening of the distance between poles of the spindle during a meiotic cell cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle elongation","termid":"GO:0051231"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle organization","termid":"GO:0000212"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"meiotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle elongation during meiosis","type":"exact"}],"termid":"GO:0051232","terms_by_termid":{"GO:0051232":null}}


id: PBO:0062261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 17 pseudogene","termid":"PBO:0062261"}


id: PR:Q9UTN6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A global transcription activator SNF2L2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02123","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit snf21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.01","secondary_identifiers":["UniProtKB:Q9UTN6"],"synonyms":[{"name":"ATP-dependent helicase snf21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RSC complex subunit snf21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SMARCA2","type":"exact"}],"termid":"PR:Q9UTN6"}


id: PBO:0030130
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_potassium_level","termid":"PBO:0030130"}


id: GO:0085019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a symbiont-induced complex organelle that comprises of multiple protein and lipid domains for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of tubovesicular network for nutrient acquisition","synonyms":[{"name":"formation by symbiont of a tubovesicular network for nutrient acquisition from host","type":"related"},{"name":"formation of a symbiont- induced tubovesicular network for nutrient acquisition from host","type":"exact"}],"termid":"GO:0085019"}


id: PBO:0060727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A13","termid":"PBO:0060727"}


id: PBO:0067723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 21","termid":"PBO:0067723"}


id: PATO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000301 absolute speed value (obsolete PATO:0000301)","termid":"PATO:0000301"}


id: PBO:0065779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine rich 2","termid":"PBO:0065779"}


id: PBO:0071500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 3","termid":"PBO:0071500"}


id: PATO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hermaphrodite","synonyms":[{"name":"intersex","type":"exact"}],"termid":"PATO:0001340"}


id: PBO:0030611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha-glucan_level","termid":"PBO:0030611"}


id: FYPO:0006567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA repair is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress","termid":"FYPO:0000162"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"abnormal DNA repair","termid":"FYPO:0006567"}


id: GO:0009419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pointed extremity furthest from the cell of a pilus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pilus tip","synonyms":[{"name":"fimbrial tip","type":"exact"}],"termid":"GO:0009419"}


id: GO:0031699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-3 adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"beta-3 adrenergic receptor binding","synonyms":[{"name":"beta-3 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031699"}


id: PBO:0083235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion mutation confers an increase in Ty1 transposition","termid":"PBO:0083235"}


id: PR:Q09769
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Lon protease, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00272","PANTHER:PTHR10046:SF23","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lon protease homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.06c","secondary_identifiers":["UniProtKB:Q09769"],"synonyms":[{"name":"Spom972h-LONP1","type":"exact"}],"termid":"PR:Q09769"}


id: PBO:0070283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 24","termid":"PBO:0070283"}


id: PBO:0017057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 4","termid":"PBO:0017057"}


id: GO:1903880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 17alpha-hydroxyprogesterone.","definition_xrefs":["GOC:TermGenie","PMID:10802282","GO_REF:0000067","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"17alpha-hydroxyprogesterone binding","termid":"GO:1903880"}


id: PBO:0090859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved protein Dpc13","termid":"PBO:0090859"}


id: PBO:0027003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_sporulation","termid":"PBO:0027003"}


id: PBO:0065242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 15","termid":"PBO:0065242"}


id: PBO:0045590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 1 (pseudogene)","termid":"PBO:0045590"}


id: GO:0047584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-4-oxobutane-1,2,4-tricarboxylate = (1E)-4-oxobut-1-ene-1,2,4-tricarboxylate + H2O.","definition_xrefs":["EC:4.2.1.83","RHEA:17401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-oxalmesaconate hydratase activity","secondary_identifiers":["KEGG_REACTION:R04478","MetaCyc:RXN-2463"],"synonyms":[{"name":"2-hydroxy-4-oxobutane-1,2,4-tricarboxylate 2,3-hydro-lyase [(E)-4-oxobut-1-ene-1,2,4-tricarboxylate-forming]","type":"related"},{"name":"2-hydroxy-4-oxobutane-1,2,4-tricarboxylate 2,3-hydro-lyase activity","type":"related"},{"name":"4-carboxy-2-oxobutane-1,2,4-tricarboxylate 2,3-hydro-lyase activity","type":"related"},{"name":"4-carboxy-2-oxohexenedioate hydratase activity","type":"related"},{"name":"gamma-oxalmesaconate hydratase activity","type":"related"},{"name":"oxalmesaconate hydratase activity","type":"related"}],"termid":"GO:0047584"}


id: _global:has_dividend_entity
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_dividend_entity","termid":"_global:has_dividend_entity"}


id: GO:0039672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of natural killer cell activation in the host.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell activation","termid":"GO:0032815"},{"relation_name":"is_a","term_name":"evasion by virus of host natural killer cell activity","termid":"GO:0039671"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host natural killer cell activation","synonyms":[{"name":"suppression by virus of host NK-cell activation","type":"exact"}],"termid":"GO:0039672"}


id: PBO:0072381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 7","termid":"PBO:0072381"}


id: GO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"positively_regulates","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte activation","synonyms":[{"name":"activation of lymphocyte activation","type":"narrow"},{"name":"stimulation of lymphocyte activation","type":"narrow"},{"name":"up regulation of lymphocyte activation","type":"exact"},{"name":"up-regulation of lymphocyte activation","type":"exact"},{"name":"upregulation of lymphocyte activation","type":"exact"}],"termid":"GO:0051251"}


id: PBO:0110043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFB2M pseudogene 1","termid":"PBO:0110043"}


id: PBO:0082993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic inhibitor of vacuolar proteinase B (PRB1); required for efficient vacuole inheritance; with thioredoxin forms protein complex LMA1, which assists in priming SNARE molecules and promotes vacuole fusion; protein abundance increases in response to DNA replication stress","termid":"PBO:0082993"}


id: FYPO:0007751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prometaphase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"spindle collapse during meiotic prometaphase I","synonyms":[{"name":"broken meiotic spindle during prometaphase I","type":"related"},{"name":"meiosis I spindle collapse during prometaphase","type":"exact"},{"name":"meiotic spindle breakage during prometaphase I","type":"exact"},{"name":"meiotic spindle collapse during prometaphase I","type":"exact"},{"name":"spindle collapse during prometaphase I","type":"exact"},{"name":"spindle collapse during prometaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007751"}


id: PBO:0090818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps60","termid":"PBO:0090818"}


id: PBO:0050041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 9 (pseudogene)","termid":"PBO:0050041"}


id: PBO:0081866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 804B","termid":"PBO:0081866"}


id: PBO:0067990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 292","termid":"PBO:0067990"}


id: FYECO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing sucrose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose MM","synonyms":[{"name":"fructose minimal medium","type":"exact"}],"termid":"FYECO:0000382"}


id: GO:0010193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ozone stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ozone","termid":"GO:0010193"}


id: GO:1904475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of small GTPase binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:15798216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of small GTPase binding","synonyms":[{"name":"regulation of Ras GTPase binding","type":"narrow"}],"termid":"GO:1904475"}


id: PATO:0001857
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in a bearer by virtue of the bearer's curving inward.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concave","termid":"PATO:0001857"}


id: GO:0045068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of elimination of extrathymically maturing T cells which react strongly with self-antigens.","definition_xrefs":["ISBN:0781735149","PMID:7880383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative T cell selection","termid":"GO:0043383"},{"relation_name":"is_a","term_name":"extrathymic T cell selection","termid":"GO:0045062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative extrathymic T cell selection","synonyms":[{"name":"negative extrathymic T lymphocyte selection","type":"exact"},{"name":"negative extrathymic T-cell selection","type":"exact"},{"name":"negative extrathymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045068"}


id: PBO:0055604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3042","termid":"PBO:0055604"}


id: PBO:0044814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108C","termid":"PBO:0044814"}


id: PBO:0086006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SPS22 has a paralog, SPS2, that arose from the whole genome duplication; redundant with Sps2p for the organization of the beta-glucan layer of the spore wall","termid":"PBO:0086006"}


id: PBO:0017613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination endonuclease Rec12","termid":"PBO:0017613"}


id: PBO:0081977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 4","termid":"PBO:0081977"}


id: GO:0050432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of catecholamines by a cell. The catecholamines are a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine.","definition_xrefs":["GOC:ef","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"catecholamine transport","termid":"GO:0051937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"catecholamine secretion","termid":"GO:0050432"}


id: GO:0060540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the diaphragm are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ morphogenesis","termid":"GO:0048644"},{"relation_name":"part_of","term_name":"diaphragm development","termid":"GO:0060539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diaphragm morphogenesis","termid":"GO:0060540"}


id: GO:0010411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xyloglucan, the cross-linking glycan composed of (1->4)-beta-D-glucan backbone substituted at regular intervals with beta-D-xylosyl-(1->6) residues, which is present in the primary cell wall of most higher plants.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemicellulose metabolic process","termid":"GO:0010410"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"xyloglucan metabolic process","synonyms":[{"name":"xyloglucan metabolism","type":"exact"}],"termid":"GO:0010411"}


id: PBO:0029834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus","termid":"PBO:0029834"}


id: PBO:0051436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-19","termid":"PBO:0051436"}


id: PBO:0065704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PUS1 antisense RNA 1","termid":"PBO:0065704"}


id: PBO:0084981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH diphosphatase (pyrophosphatase); hydrolyzes the pyrophosphate linkage in NADH and related nucleotides; localizes to peroxisomes; enzymatic component of one of several partly redundant surveillance pathways involved in decapping of non-canonical nicotinamide adenine dinucleotide (NAD) capped nuclear NAD-RNAs; also possesses deCoAping activity involved in the decapping of non-canonical dephospho-CoA capped RNA (dpCoA-RNA); nudix hydrolase family member","termid":"PBO:0084981"}


id: GO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to positive selection of B cells in the bone marrow. Positive selection is the process in which B or T cells are selected to survive based on signaling through their antigen receptors.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"is_a","term_name":"B cell positive selection","termid":"GO:0002346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell positive selection","synonyms":[{"name":"central B lymphocyte positive selection","type":"exact"},{"name":"central B-cell positive selection","type":"exact"},{"name":"central B-lymphocyte positive selection","type":"exact"}],"termid":"GO:0002348"}


id: PBO:0043555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 4 chain","termid":"PBO:0043555"}


id: PBO:0031436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation","termid":"PBO:0031436"}


id: PBO:0065107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCA antisense RNA 1","termid":"PBO:0065107"}


id: GO:0046870
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93508],"is_not":false,"summary":null,"term":"GO:0046870"}]},"cv_name":"molecular_function","definition":"Binding to a cadmium ion (Cd).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"cadmium ion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cd ion binding","type":"exact"},{"name":"cadmium binding","type":"exact"},{"name":"copper/cadmium binding","type":"broad"}],"termid":"GO:0046870","terms_by_termid":{"GO:0046870":null}}


id: PBO:0051355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-7D (pseudogene)","termid":"PBO:0051355"}


id: PBO:0058017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3943","termid":"PBO:0058017"}


id: GO:0052118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis in host environment (obsolete GO:0052118)","synonyms":[{"name":"positive energy taxis in response to host environment","type":"exact"}],"termid":"GO:0052118"}


id: GO:0062056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a compound eye pigment cell, a cell of the retina containing screening pigments that functions to screen photoreceptors from light leaking from adjacent ommatidia.","definition_xrefs":["GOC:ha","PMID:8929534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye pigment cell differentiation","termid":"GO:0062056"}


id: PBO:0062420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 62 pseudogene","termid":"PBO:0062420"}


id: PR:Q09802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cum1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0654 protein C22G7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.11c","synonyms":[{"name":"Spom972h-cum1","type":"exact"}],"termid":"PR:Q09802"}


id: MOD:01127
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01166. Remap to MOD:01166.","definition_xrefs":["DeltaMass:292"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01127 5'phos Uridinyl (obsolete MOD:01127)","termid":"MOD:01127"}


id: PBO:0001907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tryptophan-tRNA ligase Msw1 (predicted)","termid":"PBO:0001907"}


id: GO:0030152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a bacteriocin, any of a heterogeneous group of polypeptide antibiotics that are secreted by certain bacterial strains and are able to kill cells of other susceptible (frequently related) strains after adsorption at specific receptors on the cell surface. They include the colicins, and their mechanisms of action vary.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin biosynthetic process","termid":"GO:0009403"},{"relation_name":"is_a","term_name":"peptide antibiotic biosynthetic process","termid":"GO:0030651"},{"relation_name":"is_a","term_name":"bacteriocin metabolic process","termid":"GO:0046224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"bacteriocin biosynthetic process","synonyms":[{"name":"bacteriocin anabolism","type":"exact"},{"name":"bacteriocin biosynthesis","type":"exact"},{"name":"bacteriocin formation","type":"exact"},{"name":"bacteriocin synthesis","type":"exact"}],"termid":"GO:0030152"}


id: FYPO:0001733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body separation is abnormal. Spindle pole body separation is the process in which duplicated spindle pole bodies detach and migrate apart within the nuclear membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly","termid":"FYPO:0000177"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body organization","termid":"FYPO:0006387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000337","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body separation","synonyms":[{"name":"abnormal mitotic SPB separation","type":"exact"},{"name":"abnormal spindle pole body separation during mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body separation during vegetative growth","type":"exact"}],"termid":"FYPO:0001733"}


id: PBO:0005062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat protein, involved in localization to plasma membrane (predicted)","termid":"PBO:0005062"}


id: GO:0032100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases appetite.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to food","termid":"GO:0032097"},{"relation_name":"is_a","term_name":"regulation of appetite","termid":"GO:0032098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appetite","synonyms":[{"name":"activation of appetite","type":"narrow"},{"name":"appetite stimulation","type":"related"},{"name":"positive regulation of hunger","type":"related"},{"name":"stimulation of appetite","type":"narrow"},{"name":"up regulation of appetite","type":"exact"},{"name":"up-regulation of appetite","type":"exact"},{"name":"upregulation of appetite","type":"exact"}],"termid":"GO:0032100"}


id: GO:1904092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagic cell death.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25736836","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of autophagic cell death","synonyms":[{"name":"regulation of autophagic death","type":"broad"},{"name":"regulation of programmed cell death by autophagy","type":"broad"},{"name":"regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"regulation of type II programmed cell death","type":"related"}],"termid":"GO:1904092"}


id: GO:0061235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of mesenchymal stem cells that contributes to the shaping of a nephron in the mesonephros. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis","termid":"GO:0061235"}


id: GO:1905820
data:
  {"annotated_genes":["SJAG_00883","SJAG_01679","SJAG_03048","SJAG_03126","SJAG_01805","SJAG_04968","SJAG_00145","SJAG_02169","SJAG_04259","SJAG_03350","SJAG_02498","SJAG_01837","SJAG_03681","SJAG_02336","SJAG_03353","SJAG_02451","SJAG_00666","SJAG_01297","SJAG_02380","SJAG_04573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103339,109895,112004,110376,100013,104361,108069,95706,86870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[91288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[96255,98228,110377,98502,93831,110875,89932,107481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[112785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"},{"annotations":[95728,93832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901970"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chromosome separation.","definition_xrefs":["GOC:bhm","GO_REF:0000058","GOC:TermGenie","PMID:21795393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of chromosome separation","termid":"GO:1905818"},{"relation_name":"positively_regulates","term_name":"chromosome separation","termid":"GO:0051304"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03350":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of chromosome separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of chromatid release","type":"related"},{"name":"activation of chromosome separation","type":"narrow"},{"name":"activation of rDNA separation","type":"narrow"},{"name":"positive regulation of chromatid release","type":"related"},{"name":"positive regulation of rDNA separation","type":"narrow"},{"name":"up regulation of chromatid release","type":"related"},{"name":"up regulation of chromosome separation","type":"exact"},{"name":"up regulation of rDNA separation","type":"narrow"},{"name":"up-regulation of chromatid release","type":"related"},{"name":"up-regulation of chromosome separation","type":"exact"},{"name":"up-regulation of rDNA separation","type":"narrow"},{"name":"upregulation of chromatid release","type":"related"},{"name":"upregulation of chromosome separation","type":"exact"},{"name":"upregulation of rDNA separation","type":"narrow"}],"termid":"GO:1905820","terms_by_termid":{"GO:0045842":null,"GO:0140499":null,"GO:1901970":null,"GO:1902426":null,"GO:1905191":null,"GO:1905824":null}}


id: GO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 + other reaction products.","definition_xrefs":["EC:4.1.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase activity","synonyms":[{"name":"PEP carboxykinase activity","type":"related"},{"name":"PEPCK activity","type":"related"},{"name":"phosphopyruvate carboxylase activity","type":"related"}],"termid":"GO:0004611"}


id: PBO:0066219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 24","termid":"PBO:0066219"}


id: GO:1905851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of backward locomotion.","definition_xrefs":["PMID:11717360","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of locomotion","termid":"GO:0040013"},{"relation_name":"is_a","term_name":"regulation of backward locomotion","termid":"GO:0043058"},{"relation_name":"negatively_regulates","term_name":"backward locomotion","termid":"GO:0043057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of backward locomotion","synonyms":[{"name":"down regulation of backward locomotion","type":"exact"},{"name":"down-regulation of backward locomotion","type":"exact"},{"name":"downregulation of backward locomotion","type":"exact"},{"name":"inhibition of backward locomotion","type":"narrow"}],"termid":"GO:1905851"}


id: PBO:0045476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate rich 1","termid":"PBO:0045476"}


id: GO:0015979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photosynthesis","secondary_identifiers":["Wikipedia:Photosynthesis"],"termid":"GO:0015979"}


id: PBO:0057142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 221","termid":"PBO:0057142"}


id: GO:0072668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a tubulin complex. Includes the synthesis and folding of the constituent protein molecules, and those protein modifications that are involved in synthesis or assembly of the complex. A tubulin complex is a heterodimer of tubulins alpha and beta, from which microtubules are assembled.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tubulin complex biogenesis (obsolete GO:0072668)","synonyms":[{"name":"tubulin complex biogenesis","type":"exact"}],"termid":"GO:0072668"}


id: PBO:0066660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor interacting serine/threonine kinase 2","termid":"PBO:0066660"}


id: GO:0045186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the zonula adherens, a cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction assembly","termid":"GO:0034333"},{"relation_name":"part_of","term_name":"apical junction assembly","termid":"GO:0043297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"zonula adherens assembly","termid":"GO:0045186"}


id: PBO:0003612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim50 (predicted)","termid":"PBO:0003612"}


id: PATO:0001812
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A relaxation which is relatively low.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001812 decreased relaxation (obsolete PATO:0001812)","synonyms":[{"name":"low relaxation","type":"exact"}],"termid":"PATO:0001812"}


id: PBO:0054031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1362","termid":"PBO:0054031"}


id: GO:1901941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-epi-alpha-bisabolol.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"(+)-epi-alpha-bisabolol metabolic process","synonyms":[{"name":"(+)-epi-alpha-bisabolol metabolism","type":"exact"}],"termid":"GO:1901941"}


id: GO:0038201
data:
  {"annotated_genes":["SJAG_01703","SJAG_00167","SJAG_04460","SJAG_00117","SJAG_01320","SJAG_00756","SJAG_01509","SJAG_02723","SJAG_01020","SJAG_04987","SJAG_03067"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62043,111029,102786,109136,94683,102752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031931"},{"annotations":[114454,95498,104681,62044,97874,98843,102787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031932"}]},"cv_name":"cellular_component","definition":"A protein complex that contains at least TOR (target of rapamycin) in complex with other signaling components. Mediates the phosphorylation and activation of downstream signaling components including PKB (AKT) or S6K.","definition_xrefs":["Wikipedia:MTORC2","Wikipedia:MTORC1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00167":null,"SJAG_00756":null,"SJAG_01020":null,"SJAG_01320":null,"SJAG_01509":null,"SJAG_01703":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_04460":null,"SJAG_04987":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TOR complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"TOR signaling complex","type":"exact"},{"name":"mTOR complex","type":"narrow"},{"name":"target of rapamycin complex","type":"exact"}],"termid":"GO:0038201","terms_by_termid":{"GO:0031931":null,"GO:0031932":null}}


id: GO:1902215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-4-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17210636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-mediated signaling pathway","termid":"GO:1902214"},{"relation_name":"negatively_regulates","term_name":"interleukin-4-mediated signaling pathway","termid":"GO:0035771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-4-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-4-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-4-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-4-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:1902215"}


id: PBO:0039799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"archain 1","termid":"PBO:0039799"}


id: GO:1902249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to IMP, inosine monophosphate.","definition_xrefs":["GOC:mah","PMID:4314233","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"IMP binding","termid":"GO:1902249"}


id: PBO:0051265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (IV)-44-1 (pseudogene)","termid":"PBO:0051265"}


id: MOD:01783
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N,N-dimethyl-L-serine.","definition_xrefs":["RESID:AA0534","PubMed:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino dimethylated residue","termid":"MOD:01686"},{"relation_name":"is_a","term_name":"N-methylated serine","termid":"MOD:01800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-serine","synonyms":[{"name":"(2S)-2-(dimethylamino)propanoic acid","type":"exact"},{"name":"MOD_RES N,N-dimethylserine","type":"exact"},{"name":"N,N-dimethyl-L-serine","type":"exact"},{"name":"N,N-dimethylserine","type":"exact"}],"termid":"MOD:01783"}


id: PBO:0005599
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.3.8","termid":"PBO:0005599"}


id: PBO:0072456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 20","termid":"PBO:0072456"}


id: PBO:0039082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior gradient 3, protein disulphide isomerase family member","termid":"PBO:0039082"}


id: GO:0005432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in).","definition_xrefs":["GOC:curators","PMID:16371597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"calcium:sodium antiporter activity","secondary_identifiers":["Reactome:R-HSA-425661","Reactome:R-HSA-8949688","Reactome:R-HSA-8949703","RHEA:29255"],"synonyms":[{"name":"mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"sodium/calcium exchanger","type":"exact"},{"name":"sodium:calcium exchange","type":"related"}],"termid":"GO:0005432"}


id: PBO:0072444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 8","termid":"PBO:0072444"}


id: PBO:0074086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 3","termid":"PBO:0074086"}


id: PBO:0079356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1c","termid":"PBO:0079356"}


id: GO:1900484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to vacuolar membrane.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein targeting to membrane","termid":"GO:0090315"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuolar membrane","termid":"GO:1900483"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"negatively_regulates","term_name":"protein targeting to vacuolar membrane","termid":"GO:0044395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006605","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein targeting to vacuolar membrane","synonyms":[{"name":"down regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"down-regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"downregulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"inhibition of protein targeting to vacuolar membrane","type":"narrow"}],"termid":"GO:1900484"}


id: PBO:0074750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 109","termid":"PBO:0074750"}


id: PBO:0079491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNDC11 antisense RNA 1","termid":"PBO:0079491"}


id: GO:0033259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which new strands of DNA are synthesized in a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"},{"relation_name":"is_a","term_name":"plastid DNA metabolic process","termid":"GO:0033258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"plastid DNA replication","synonyms":[{"name":"plastid DNA synthesis","type":"related"},{"name":"replication of plastid DNA","type":"exact"}],"termid":"GO:0033259"}


id: SO:0002136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A joining gene that rearranges at the DNA level and codes the joining region of the variable domain of aT-cell receptor chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_J_Gene","synonyms":[{"name":"T_cell_receptor_J_gene","type":"exact"}],"termid":"SO:0002136"}


id: FYPO:0000355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the endoplasmic reticulum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal endoplasmic reticulum morphology","synonyms":[{"name":"endoplasmic reticulum morphology: normal","type":"related"},{"name":"normal ER morphology","type":"exact"},{"name":"normal endoplasmic reticulum morphology during mitotic cell cycle","type":"related"},{"name":"normal endoplasmic reticulum morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0000355"}


id: GO:0051085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assisting in the correct posttranslational noncovalent assembly of proteins, which is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"'de novo' post-translational protein folding","termid":"GO:0051084"},{"relation_name":"is_a","term_name":"chaperone-mediated protein folding","termid":"GO:0061077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0006457","GO:0008150"],"is_obsolete":false,"name":"chaperone cofactor-dependent protein refolding","secondary_identifiers":["GO:0070389"],"synonyms":[{"name":"chaperone co-factor-dependent protein folding","type":"related"},{"name":"chaperone co-factor-dependent protein refolding","type":"exact"},{"name":"chaperone cofactor-dependent 'de novo' protein folding","type":"exact"},{"name":"chaperone cofactor-dependent protein folding","type":"exact"},{"name":"chaperone mediated protein folding requiring cofactor","type":"related"}],"termid":"GO:0051085"}


id: GO:1901211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"negatively_regulates","term_name":"cardiac chamber formation","termid":"GO:0003207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac chamber formation","synonyms":[{"name":"down regulation of cardiac chamber formation","type":"exact"},{"name":"down regulation of heart chamber formation","type":"exact"},{"name":"down-regulation of cardiac chamber formation","type":"exact"},{"name":"down-regulation of heart chamber formation","type":"exact"},{"name":"downregulation of cardiac chamber formation","type":"exact"},{"name":"downregulation of heart chamber formation","type":"exact"},{"name":"inhibition of cardiac chamber formation","type":"narrow"},{"name":"inhibition of heart chamber formation","type":"exact"},{"name":"negative regulation of heart chamber formation","type":"exact"}],"termid":"GO:1901211"}


id: PBO:0004875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-14 sterol reductase Erg24 (predicted)","termid":"PBO:0004875"}


id: PBO:0043554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 3 chain","termid":"PBO:0043554"}


id: GO:0050265
data:
  {"annotated_genes":["SJAG_02370","SJAG_02383"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86931,87801],"is_not":false,"summary":null,"term":"GO:0050265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + RNA(n) = diphosphate + RNA(n+1).","definition_xrefs":["MetaCyc:RNA-URIDYLYLTRANSFERASE-RXN","EC:2.7.7.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_02383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"RNA uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8941312","RHEA:14785"],"synonyms":[{"name":"TUT activity","type":"related"},{"name":"UTP:RNA uridylyltransferase activity","type":"exact"},{"name":"poly(U) polymerase activity","type":"exact"},{"name":"polynucleotide uridylyltransferase activity","type":"exact"},{"name":"terminal uridylyltransferase activity","type":"related"}],"termid":"GO:0050265","terms_by_termid":{"GO:0050265":null}}


id: PBO:0004658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Tma20 (predicted)","termid":"PBO:0004658"}


id: GO:0051922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + cholesterol = adenosine 3',5'-bisphosphate + cholesterol sulfate + H+.","definition_xrefs":["PMID:11416019","RHEA:52368","PMID:12730293","PMID:12145317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol sulfotransferase activity","termid":"GO:0004027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholesterol sulfotransferase activity","termid":"GO:0051922"}


id: GO:0005460
data:
  {"annotated_genes":["SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108486],"is_not":false,"summary":null,"term":"GO:0005460"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucose from one side of a membrane to the other. UDP-glucose is a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"UDP-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005460","terms_by_termid":{"GO:0005460":null}}


id: PBO:0046610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 12","termid":"PBO:0046610"}


id: PBO:0051106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-24","termid":"PBO:0051106"}


id: GO:1903326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tRNA metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"tRNA metabolic process","termid":"GO:0006399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"regulation of tRNA metabolic process","synonyms":[{"name":"regulation of tRNA metabolism","type":"exact"}],"termid":"GO:1903326"}


id: FYPO:0006789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A)-specific ribonuclease activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal 3'-5'-exoribonuclease activity","termid":"FYPO:0002065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal poly(A)-specific ribonuclease activity","termid":"FYPO:0006789"}


id: PBO:0017707
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CDC43","termid":"PBO:0017707"}


id: GO:0006120
data:
  {"annotated_genes":["SJAG_04152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108965],"is_not":false,"summary":null,"term":"GO:0006120"}]},"cv_name":"biological_process","definition":"The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic electron transport chain","termid":"GO:0019646"},{"relation_name":"part_of","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"mitochondrial electron transport, NADH to ubiquinone","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"complex I (NADH to ubiquinone)","type":"related"},{"name":"oxidative phosphorylation, NADH to ubiquinone","type":"exact"}],"termid":"GO:0006120","terms_by_termid":{"GO:0006120":null}}


id: GO:0035162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stages of blood cell formation that take place within the embryo.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic hemopoiesis","synonyms":[{"name":"embryonic haematopoiesis","type":"exact"},{"name":"embryonic haemopoiesis","type":"exact"},{"name":"embryonic hematopoiesis","type":"exact"}],"termid":"GO:0035162"}


id: PATO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having two or more entities that extend from a common point in different directions.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent from","termid":"PATO:0002424"}


id: PR:Q9US46
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase RNF14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase itt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.14","secondary_identifiers":["UniProtKB:Q9US46"],"synonyms":[{"name":"RING finger protein itt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNF14","type":"exact"}],"termid":"PR:Q9US46"}


id: PBO:0057744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1539","termid":"PBO:0057744"}


id: GO:0044069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont organism modulates the anion transport, the directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, of its host organism.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"monoatomic anion transport","termid":"GO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"modulation by symbiont of host anion transport","synonyms":[{"name":"modification of host anion transport by symbiont","type":"exact"}],"termid":"GO:0044069"}


id: GO:0046521
data:
  {"annotated_genes":["SJAG_00519","SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85988,104927],"is_not":false,"summary":null,"term":"GO:0046521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingoids, any of a class of compounds comprising sphinganine and its homologues and stereoisomers, and derivatives of these compounds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingoid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sphingoid breakdown","type":"exact"},{"name":"sphingoid catabolism","type":"exact"},{"name":"sphingoid degradation","type":"exact"}],"termid":"GO:0046521","terms_by_termid":{"GO:0046521":null}}


id: GO:0010356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + H+ + homogentisate = 6-geranylgeranyl-2-methylbenzene-1,4-diol + CO2 + diphosphate.","definition_xrefs":["PMID:16989822","GOC:pz","EC:2.5.1.116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"homogentisate geranylgeranyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14929","RHEA:38003"],"synonyms":[{"name":"homogentisate geranylgeranyl transferase activity","type":"exact"}],"termid":"GO:0010356"}


id: PBO:0067581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 738, pseudogene","termid":"PBO:0067581"}


id: SO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which decreases the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_level_variant","termid":"SO:0001553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_translational_product_level","synonyms":[{"name":"decrease translational product level","type":"exact"}],"termid":"SO:0001555"}


id: GO:0043367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell.","definition_xrefs":["CL:0000624","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell differentiation","synonyms":[{"name":"CD4-positive, alpha beta T cell development","type":"related"},{"name":"CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T-cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043367"}


id: PBO:0091581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Yip11/Gem2","termid":"PBO:0091581"}


id: PBO:0073712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI family transcriptional corepressor 2","termid":"PBO:0073712"}


id: PBO:0030635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_methionine_import_during_nitrogen_starvation","termid":"PBO:0030635"}


id: PBO:0065924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB, member of RAS oncogene family like 3","termid":"PBO:0065924"}


id: GO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"gamma-delta intraepithelial T cell development","type":"related"},{"name":"gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002304"}


id: PBO:0035976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_NEDD8-specific_protease_activity","termid":"PBO:0035976"}


id: PBO:0069811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1097, pseudogene","termid":"PBO:0069811"}


id: PBO:0074528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C4","termid":"PBO:0074528"}


id: PR:P48383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sak1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P48383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.14","synonyms":[{"name":"Spom972h-sak1","type":"exact"}],"termid":"PR:P48383"}


id: PBO:0073521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding protein 4","termid":"PBO:0073521"}


id: GO:1905804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23721876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to manganese ion","termid":"GO:1905802"},{"relation_name":"positively_regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to manganese ion","synonyms":[{"name":"activation of cellular response to manganese","type":"narrow"},{"name":"activation of cellular response to manganese ion","type":"narrow"},{"name":"positive regulation of cellular response to manganese","type":"exact"},{"name":"up regulation of cellular response to manganese","type":"exact"},{"name":"up regulation of cellular response to manganese ion","type":"exact"},{"name":"up-regulation of cellular response to manganese","type":"exact"},{"name":"up-regulation of cellular response to manganese ion","type":"exact"},{"name":"upregulation of cellular response to manganese","type":"exact"},{"name":"upregulation of cellular response to manganese ion","type":"exact"}],"termid":"GO:1905804"}


id: PBO:0027523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytokinesis_checkpoint","termid":"PBO:0027523"}


id: GO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide production","termid":"GO:0002788"},{"relation_name":"negatively_regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antifungal peptide production","synonyms":[{"name":"down regulation of antifungal peptide production","type":"exact"},{"name":"down-regulation of antifungal peptide production","type":"exact"},{"name":"downregulation of antifungal peptide production","type":"exact"},{"name":"inhibition of antifungal peptide production","type":"narrow"}],"termid":"GO:0002789"}


id: GO:1901099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction in absence of ligand.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"signal transduction in absence of ligand","termid":"GO:0038034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of signal transduction in absence of ligand","synonyms":[{"name":"down regulation of basal signaling","type":"narrow"},{"name":"down regulation of non-classical signal transduction","type":"broad"},{"name":"down regulation of signal transduction in absence of agonist","type":"exact"},{"name":"down regulation of signal transduction in absence of ligand","type":"exact"},{"name":"down-regulation of basal signaling","type":"narrow"},{"name":"down-regulation of non-classical signal transduction","type":"broad"},{"name":"down-regulation of signal transduction in absence of agonist","type":"exact"},{"name":"down-regulation of signal transduction in absence of ligand","type":"exact"},{"name":"downregulation of basal signaling","type":"narrow"},{"name":"downregulation of non-classical signal transduction","type":"broad"},{"name":"downregulation of signal transduction in absence of agonist","type":"exact"},{"name":"downregulation of signal transduction in absence of ligand","type":"exact"},{"name":"inhibition of signal transduction in absence of ligand","type":"narrow"},{"name":"negative regulation of non-classical signal transduction","type":"broad"},{"name":"negative regulation of signal transduction in absence of agonist","type":"exact"}],"termid":"GO:1901099"}


id: PBO:0090178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A","termid":"PBO:0090178"}


id: PR:O60179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.04c","synonyms":[{"name":"Spom972h-utp10","type":"exact"},{"name":"U3 protein 10 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60179"}


id: PBO:0088298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Velum formation protein 1-like conserved fungal family","termid":"PBO:0088298"}


id: FYPO:0004824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the number of ribosomal DNA (rDNA) repeats present in the rDNA arrays on chromosome III is normal (within the range in wild type cells).","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal rDNA copy number","synonyms":[{"name":"normal rDNA copy number during mitotic cell cycle","type":"related"},{"name":"normal rDNA copy number during vegetative growth","type":"exact"},{"name":"normal ribosomal DNA copy number","type":"exact"}],"termid":"FYPO:0004824"}


id: PBO:0074356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC3 pseudogene 1","termid":"PBO:0074356"}


id: GO:1904292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ERAD pathway.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"regulates","term_name":"ERAD pathway","termid":"GO:0036503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of ERAD pathway","synonyms":[{"name":"regulation of ER-associated degradation pathway","type":"related"},{"name":"regulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"regulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"}],"termid":"GO:1904292"}


id: PBO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint clamp complex protein Rad9","termid":"PBO:0001139"}


id: PBO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14-N (predicted)","termid":"PBO:0002165"}


id: PBO:0089179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA acetyltransferase Tan1","termid":"PBO:0089179"}


id: GO:0140376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving a signal and transmitting it in a cell to initiate an innate immune response.","definition_xrefs":["PMID:31415752","PMID:28921463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"innate immune receptor activity","termid":"GO:0140376"}


id: GO:0036176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a neutral pH (pH close to 7) stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:di","Wikipedia:PH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to neutral pH","termid":"GO:0036176"}


id: GO:0140724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of patulin.","definition_xrefs":["PMID:25625822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"patulin biosynthetic process","termid":"GO:0140723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"positive regulation of patulin biosynthetic process","synonyms":[{"name":"positive regulation of patulin anabolism","type":"exact"},{"name":"positive regulation of patulin formation","type":"exact"},{"name":"positive regulation of patulin synthesis","type":"exact"}],"termid":"GO:0140724"}


id: GO:0031976
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any thylakoid within a plastid.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid","termid":"GO:0009579"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid thylakoid","termid":"GO:0031976"}


id: GO:0050734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxycinnamoyl group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"hydroxycinnamoyltransferase activity","termid":"GO:0050734"}


id: MOD:00747
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a sodium atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium containing modified residue","synonyms":[{"name":"NaRes","type":"exact"}],"termid":"MOD:00747"}


id: PBO:0048844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-6-phosphate deaminase 2","termid":"PBO:0048844"}


id: SO:0000840
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a repeated sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topologically_defined_region","termid":"SO:0001412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_component","synonyms":[{"name":"repeat component","type":"exact"}],"termid":"SO:0000840"}


id: PBO:0052140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 7","termid":"PBO:0052140"}


id: PBO:0090002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L13","termid":"PBO:0090002"}


id: PBO:0031611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_vacuolar_transport","termid":"PBO:0031611"}


id: PBO:0017440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_transcription_of","termid":"PBO:0017440"}


id: PR:O94699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein C83.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.16c","synonyms":[{"name":"Spom972h-SPBC83.16c","type":"exact"}],"termid":"PR:O94699"}


id: FYPO:0004424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein threonine phosphorylation (obsolete FYPO:0004424)","synonyms":[{"name":"increased peptidyl-threonine phosphorylation","type":"exact"},{"name":"increased threonine phosphorylation","type":"exact"}],"termid":"FYPO:0004424"}


id: GO:0034617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a tetrahydrobiopterin, 5,6,7,8-tetrahydrobiopterin or a derivative thereof; tetrahydrobiopterins are enzyme cofactors that carry electrons in redox reactions.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tetrahydrobiopterin binding","synonyms":[{"name":"BH4 binding","type":"exact"},{"name":"H4biopterin binding","type":"exact"},{"name":"sapropterin binding","type":"exact"}],"termid":"GO:0034617"}


id: GO:0098681
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane bound, electron dense structure associated that extends perpendicular to the presynaptic membrane in ribbon synapses. The ribbon's surface is studded with small particles to which synaptic vesicles tether via fine filaments. The tethered vesicles function as a pool, several fold greater than the docked pool available for fast release, which supports sustained release of vesicles. Synaptic ribbons may be plate like or spherical.","definition_xrefs":["PMID:15626493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"synaptic ribbon","termid":"GO:0098681"}


id: PBO:0091017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase Pud1","termid":"PBO:0091017"}


id: PBO:0002783
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively regulates sexual differentiation in nutrient rich conditions by repression of Ste11","termid":"PBO:0002783"}


id: MOD:01454
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an N-terminal L-proline residue and a strand of DNA at the C-1 of a ribose, freeing the nucleotide base and forming N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium.","definition_xrefs":["PubMed:11847126","PubMed:10833024","PubMed:9030608","RESID:AA0494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium","synonyms":[{"name":"(1Z,2S)-2-carboxy-1-[(3R,4R)-3,4-dihydroxy-5-(phosphonooxy)pentylidene]pyrrolidinium","type":"exact"},{"name":"DNA glycosylase proline Schiff base intermediate","type":"related"},{"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium","type":"exact"}],"termid":"MOD:01454"}


id: GO:0035471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by luteinizing hormone binding to a receptor, where the activated receptor signals via downstream effectors that contribute to progression of the ovarian follicle over time, from its formation to the mature structure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"luteinizing hormone signaling pathway","termid":"GO:0042700"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"luteinizing hormone signaling pathway involved in ovarian follicle development","synonyms":[{"name":"luteinizing hormone signalling pathway involved in ovarian follicle development","type":"exact"}],"termid":"GO:0035471"}


id: PBO:0002536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tethering factor for nuclear proteasome Cut8","termid":"PBO:0002536"}


id: GO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimeric protein complex having creatine kinase activity.","definition_xrefs":["PMID:173175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatine kinase complex","termid":"GO:0002185"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"cytosolic creatine kinase complex","termid":"GO:0002186"}


id: PBO:0086255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that promotes the transport and maturation of Pma1 with Exp1; cleaved specifically by Kex2p; localizes to the Golgi apparatus and to the endoplasmic reticulum in HTP studies","termid":"PBO:0086255"}


id: GO:0010023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of proanthocyanidin.","definition_xrefs":["GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"proanthocyanidin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-641"],"synonyms":[{"name":"proanthocyanidin anabolism","type":"exact"},{"name":"proanthocyanidin biosynthesis","type":"exact"},{"name":"proanthocyanidin formation","type":"exact"},{"name":"proanthocyanidin synthesis","type":"exact"}],"termid":"GO:0010023"}


id: PBO:0049787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 22 (gene/pseudogene)","termid":"PBO:0049787"}


id: GO:0031594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuromuscular junction","secondary_identifiers":["NIF_Subcellular:sao1124888485","Wikipedia:Neuromuscular_junction"],"synonyms":[{"name":"NMJ","type":"related"},{"name":"motor endplate","type":"related"}],"termid":"GO:0031594"}


id: PBO:0075830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 4 pseudogene 1","termid":"PBO:0075830"}


id: FYPO:0002740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell proceeds normally through a specific mitotic cell cycle phase. A mitotic cell cycle phase is any of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["PomBase:mah","GO:0022403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle","termid":"FYPO:0000411"},{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}


id: PBO:0027781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_dephosphorylation","termid":"PBO:0027781"}


id: FYPO:0003251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more sterol regulatory elements (SREs) occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:24327658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"decreased transcription from SRE promoter","synonyms":[{"name":"decreased transcription from SRE promoter during mitotic cell cycle","type":"related"},{"name":"decreased transcription from SRE promoter during vegetative growth","type":"exact"},{"name":"decreased transcription from SRE-containing promoter","type":"exact"},{"name":"decreased transcription from sterol regulatory element-containing promoter","type":"exact"},{"name":"reduced transcription from SRE promoter","type":"exact"}],"termid":"FYPO:0003251"}


id: PBO:0088499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein Ubx4","termid":"PBO:0088499"}


id: PBO:0000304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein, unnamed (predicted)","termid":"PBO:0000304"}


id: PBO:0088787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit G","termid":"PBO:0088787"}


id: GO:0003685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA repair protein (obsolete GO:0003685)","synonyms":[{"name":"DNA repair protein","type":"exact"}],"termid":"GO:0003685"}


id: PR:Q9HDZ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thiomorpholine-carboxylate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00761","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P11E10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP11E10.01","secondary_identifiers":["UniProtKB:Q9HDZ0"],"synonyms":[{"name":"Spom972h-CRYM","type":"exact"}],"termid":"PR:Q9HDZ0"}


id: PR:000027608
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of replication checkpoint protein 1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:14585996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediator of replication checkpoint protein 1","termid":"PR:000027605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of replication checkpoint protein 1 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC694.06c","synonyms":[{"name":"Spom-mrc1/UnMod","type":"exact"}],"termid":"PR:000027608"}


id: PATO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elevation quality inhering in a bearer by virtue the bearer's being in a high position relative to another entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elevation","termid":"PATO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased elevation relative to","termid":"PATO:0002515"}


id: PBO:0035812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_tRNA_genes_during_vegetative_growth","termid":"PBO:0035812"}


id: PBO:0054998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2413","termid":"PBO:0054998"}


id: PBO:0087097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal large subunit (60S) assembly factor; association of the N-terminal ubiquitin-like (UBL) domain of this preribosomal factor with the MIDAS domain in the Rea1p tail, promoted by the GTPase Nog2p, is required for the ATP-dependent dissociation of preribosomal factors including the Rix1p subcomplex, Rea1p, Nog2p and Rsa1p itself prior to nuclear export of pre-60S particles; contains WD-repeats and a UBL domain; localizes to the nucleolus","termid":"PBO:0087097"}


id: GO:0010118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of opening or closing of stomata, which is directly related to the stomatal conductance (measuring rate of passage of either water vapor or carbon dioxide (CO2) through stomata).","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal movement","termid":"GO:0010118"}


id: PBO:0029798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short,_thick,_misoriented_actin_cables","termid":"PBO:0029798"}


id: PBO:0072228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 3","termid":"PBO:0072228"}


id: GO:0050515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-CDP-2-C-methyl-D-erythritol + ATP = 4-CDP-2-C-methyl-D-erythritol 2-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.148","RHEA:18437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity","secondary_identifiers":["KEGG_REACTION:R05634","GO:0008698","MetaCyc:2.7.1.148-RXN"],"synonyms":[{"name":"4-diphosphocytidyl-2-C-methyl-D-erythritol kinase activity","type":"related"},{"name":"4-diphosphocytidyl-2C-methyl-D-erythritol kinase activity","type":"exact"},{"name":"ATP:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol 2-phosphotransferase activity","type":"related"},{"name":"CDP-ME kinase activity","type":"related"},{"name":"CMK activity","type":"related"}],"termid":"GO:0050515"}


id: PBO:0034096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syntenic_paralogy_relationship_with","termid":"PBO:0034096"}


id: PBO:0078151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 29/delta variable 5","termid":"PBO:0078151"}


id: PBO:0029712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_5-fluorouracil","termid":"PBO:0029712"}


id: FYPO:0009032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of bortezomib than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to bortezomib","synonyms":[{"name":"resistance to bortezomib during mitotic cell cycle","type":"related"},{"name":"resistance to bortezomib during vegetative growth","type":"exact"},{"name":"resistant to bortezomib","type":"exact"}],"termid":"FYPO:0009032"}


id: PBO:0031658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth_during_cellular_hyperosmotic_response","termid":"PBO:0031658"}


id: GO:0052893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N1-acetylspermine + oxygen + H2O = N-(3-acetamidopropyl)-4-aminobutanal + propane-1,3-diamine + hydrogen peroxide.","definition_xrefs":["MetaCyc:RXN-10465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"N1-acetylspermine:oxygen oxidoreductase (propane-1,3-diamine-forming) activity","secondary_identifiers":["EC:1.5.3.14","RHEA:25996"],"synonyms":[{"name":"polyamine oxidase (propane-1,3-diamine-forming) activity","type":"broad"}],"termid":"GO:0052893"}


id: GO:0050491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sulcatol = H+ + NADH + sulcatone.","definition_xrefs":["EC:1.1.1.260","RHEA:24484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sulcatone reductase activity","secondary_identifiers":["KEGG_REACTION:R05678","MetaCyc:1.1.1.260-RXN"],"synonyms":[{"name":"sulcatol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050491"}


id: GO:1904005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipase D activity.","definition_xrefs":["GOC:TermGenie","PMID:11211872","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipase activity","termid":"GO:0010517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phospholipase D activity","synonyms":[{"name":"regulation of choline phosphatase activity","type":"exact"},{"name":"regulation of lecithinase D activity","type":"exact"},{"name":"regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"}],"termid":"GO:1904005"}


id: PBO:0065552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 2","termid":"PBO:0065552"}


id: PBO:0086528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YPR014C is not an essential gene","termid":"PBO:0086528"}


id: FYPO:0006629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphatidylinositol level","termid":"FYPO:0001507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal phosphatidylinositol-4-phosphate level in plasma membrane","synonyms":[{"name":"normal 1-phosphatidyl-1D-myo-inositol 4-phosphate level in plasma membrane","type":"exact"},{"name":"normal phosphatidylinositol-4-phosphate level in cell membrane","type":"exact"},{"name":"normal phosphatidylinositol-4-phosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"normal phosphatidylinositol-4-phosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"normal plasma membrane PI(5)P level","type":"exact"},{"name":"normal plasma membrane phosphatidylinositol-4-phosphate level","type":"exact"}],"termid":"FYPO:0006629"}


id: GO:0060454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"regulation of gastric acid secretion","termid":"GO:0060453"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"positively_regulates","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastric acid secretion","termid":"GO:0060454"}


id: PBO:0078148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 26-2","termid":"PBO:0078148"}


id: PBO:0073373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTAD4 antisense RNA 1","termid":"PBO:0073373"}


id: PBO:0028265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_binding_during_cellular_response_to_rapamycin","termid":"PBO:0028265"}


id: SO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_insert","synonyms":[{"name":"engineered insert","type":"exact"}],"termid":"SO:0000915"}


id: PBO:0053684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 871","termid":"PBO:0053684"}


id: PBO:0005428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Rho1, Rgf1","termid":"PBO:0005428"}


id: GO:0045780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone resorption.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone resorption","termid":"GO:0045124"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"bone resorption","termid":"GO:0045453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone resorption","synonyms":[{"name":"activation of bone resorption","type":"narrow"},{"name":"stimulation of bone resorption","type":"narrow"},{"name":"up regulation of bone resorption","type":"exact"},{"name":"up-regulation of bone resorption","type":"exact"},{"name":"upregulation of bone resorption","type":"exact"}],"termid":"GO:0045780"}


id: GO:0120266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chromosome attachment to the nuclear envelope.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of chromosome attachment to the nuclear envelope","termid":"GO:0120264"},{"relation_name":"positively_regulates","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromosome attachment to the nuclear envelope","synonyms":[{"name":"activation of chromosome attachment to the nuclear envelope","type":"narrow"},{"name":"stimulation of chromosome attachment to the nuclear envelope","type":"narrow"},{"name":"up regulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"up-regulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"upregulation of chromosome attachment to the nuclear envelope","type":"exact"}],"termid":"GO:0120266"}


id: GO:0032362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of FAD, the oxidized form of flavin-adenine dinucleotide.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete FAD catabolic process (obsolete GO:0032362)","synonyms":[{"name":"FAD breakdown","type":"exact"},{"name":"FAD catabolism","type":"exact"},{"name":"FAD degradation","type":"exact"},{"name":"oxidized flavin adenine dinucleotide catabolic process","type":"exact"}],"termid":"GO:0032362"}


id: PBO:0068240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal pseudogene 2","termid":"PBO:0068240"}


id: GO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an immune cell in response to an external stimulus a part of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration involved in immune response","termid":"GO:0002522"},{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte chemotaxis involved in immune response","synonyms":[{"name":"immune cell chemotaxis during immune response","type":"exact"},{"name":"leucocyte chemotaxis during immune response","type":"exact"}],"termid":"GO:0002233"}


id: GO:0009116
data:
  {"annotated_genes":["SJAG_01070","SJAG_01781","SJAG_05029","SJAG_02959","SJAG_00694","SJAG_04927","SJAG_03881","SJAG_03096","SJAG_01359","SJAG_00044","SJAG_04693","SJAG_02582","SJAG_02580","SJAG_02179","SJAG_00134","SJAG_06634","SJAG_01859","SJAG_03213","SJAG_00957","SJAG_00885","SJAG_03771","SJAG_01673","SJAG_04264"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[83755,83756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[109818,86692,109817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[112942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[104485,85352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[104609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[104610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[109206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[104611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[94712,94713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[87211,86802,108283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[103370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042278"},{"annotations":[89884,85933,89662,111942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[86803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[101598,103372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006213"},{"annotations":[93872,109931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[108025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01070":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03213":null,"SJAG_03771":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_04693":null,"SJAG_04927":null,"SJAG_05029":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside metabolism","type":"exact"}],"termid":"GO:0009116","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0006213":null,"GO:0009972":null,"GO:0042278":null,"GO:0043097":null,"GO:0043174":null,"GO:0046085":null,"GO:0046086":null,"GO:0046132":null,"GO:0046135":null,"GO:0046495":null,"GO:0071590":null,"GO:0071592":null}}


id: PBO:0052850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-6","termid":"PBO:0052850"}


id: PR:O13993
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10102:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.12","secondary_identifiers":["UniProtKB:O13993"],"synonyms":[{"name":"SPAC26H5.12","type":"related"},{"name":"Spom972h-POLRMT","type":"exact"}],"termid":"PR:O13993"}


id: PBO:0046493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergosterol biosynthesis 28 homolog","termid":"PBO:0046493"}


id: GO:0048618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the foregut are generated and organized, during the post-embryonic phase.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"foregut morphogenesis","termid":"GO:0007440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic foregut morphogenesis","termid":"GO:0048618"}


id: PBO:0058396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4768","termid":"PBO:0058396"}


id: PBO:0002578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H70 (predicted)","termid":"PBO:0002578"}


id: PBO:0044450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 29, pseudogene","termid":"PBO:0044450"}


id: PBO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.3","termid":"PBO:0000913"}


id: PBO:0109377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 9A","termid":"PBO:0109377"}


id: PR:Q9P7Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase copper chaperone that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16719:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.14c","secondary_identifiers":["UniProtKB:Q9P7Z7"],"synonyms":[{"name":"SPBC26H8.14c","type":"related"},{"name":"Spom972h-COX17","type":"exact"}],"termid":"PR:Q9P7Z7"}


id: PBO:0029315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_pre-autophagosomal_structure","termid":"PBO:0029315"}


id: PBO:0028017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_farnesyltransferase_activity","termid":"PBO:0028017"}


id: GO:0060888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the epidermis of the limb in space to define a volume in which specific patterns of basal cell, spinous cell and granular cells will differentiate giving rise to the layers of the limb epidermis.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis stratification","termid":"GO:0060888"}


id: MOD:00064
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-acetyl-L-lysine.","definition_xrefs":["Unimod:1#K","PubMed:670159","OMSSA:24","PubMed:12175151","DeltaMass:214","PubMed:14730666","RESID:AA0055","PubMed:11857757","PubMed:11369851","ChEBI:17752","PubMed:11999733","PubMed:15350136","PubMed:1680872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylated L-lysine","termid":"MOD:00723"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-acetyl-L-lysine","synonyms":[{"name":"(2S)-6-acetamido-2-aminohexanoic acid","type":"exact"},{"name":"6-acetylamino-2-aminohexanoic acid","type":"exact"},{"name":"6-acetylazanyl-2-aminohexanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES N6-acetyllysine","type":"exact"},{"name":"N(zeta)-acetyllysine","type":"exact"},{"name":"N6-acetyl-L-lysine","type":"exact"},{"name":"N6-acetylated L-lysine","type":"exact"},{"name":"N6AcLys","type":"exact"},{"name":"acetylk","type":"exact"},{"name":"epsilon-acetyllysine","type":"exact"}],"termid":"MOD:00064"}


id: PBO:0062646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily Q member 1 pseudogene","termid":"PBO:0062646"}


id: GO:0018116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adenylylation of peptidyl-lysine to form peptidyl-N6-(phospho-5'-adenosine)-L-lysine.","definition_xrefs":["RESID:AA0227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein adenylylation","termid":"GO:0018117"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine adenylylation","synonyms":[{"name":"peptidyl-lysine adenylation","type":"exact"}],"termid":"GO:0018116"}


id: PBO:0091994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase","termid":"PBO:0091994"}


id: PBO:0028456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actomyosin_contractile_ring_assembly","termid":"PBO:0028456"}


id: GO:0150167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K4 acetylation.","definition_xrefs":["PMID:20737563","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K4 acetylation (obsolete GO:0150167)","termid":"GO:0150167"}


id: FYPO:0004048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione peroxidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000661","FYPO:0005447","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal glutathione peroxidase activity","termid":"FYPO:0004048"}


id: GO:1903220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of malate dehydrogenase (decarboxylating) (NADP+) activity.","definition_xrefs":["GOC:TermGenie","PMID:12398416","GOC:sart","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","termid":"GO:1903218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","synonyms":[{"name":"activation of 'malic' enzyme","type":"related"},{"name":"activation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"narrow"},{"name":"activation of L-malate:NADP oxidoreductase activity","type":"narrow"},{"name":"activation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"activation of NADP-malic enzyme activity","type":"narrow"},{"name":"activation of NADP-specific malate dehydrogenase activity","type":"narrow"},{"name":"activation of NADP-specific malic enzyme","type":"related"},{"name":"activation of malate dehydrogenase (NADP, decarboxylating)","type":"narrow"},{"name":"activation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"narrow"},{"name":"activation of malate dehydrogenase (decarboxylating, NADP)","type":"narrow"},{"name":"positive regulation of 'malic' enzyme","type":"related"},{"name":"positive regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"positive regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"positive regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"positive regulation of NADP-malic enzyme activity","type":"exact"},{"name":"positive regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"positive regulation of NADP-specific malic enzyme","type":"related"},{"name":"positive regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"positive regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"up regulation of 'malic' enzyme","type":"related"},{"name":"up regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"up regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"up regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"up regulation of NADP-malic enzyme activity","type":"exact"},{"name":"up regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"up regulation of NADP-specific malic enzyme","type":"related"},{"name":"up regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"up regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"up regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"up-regulation of 'malic' enzyme","type":"related"},{"name":"up-regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"up-regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"up-regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"up-regulation of NADP-malic enzyme activity","type":"exact"},{"name":"up-regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"up-regulation of NADP-specific malic enzyme","type":"related"},{"name":"up-regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"up-regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"up-regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"upregulation of 'malic' enzyme","type":"related"},{"name":"upregulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"upregulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"upregulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"upregulation of NADP-malic enzyme activity","type":"exact"},{"name":"upregulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"upregulation of NADP-specific malic enzyme","type":"related"},{"name":"upregulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"upregulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"upregulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"}],"termid":"GO:1903220"}


id: GO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates levels of neurotransmitter.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of neurotransmitter levels (obsolete GO:0001505)","termid":"GO:0001505"}


id: PBO:0040130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASB15 antisense RNA 1","termid":"PBO:0040130"}


id: PBO:0077570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 276","termid":"PBO:0077570"}


id: FYPO:0005202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to rapamycin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to rapamycin","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to rapamycin","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to rapamycin during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to rapamycin during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to rapamycin","type":"exact"}],"termid":"FYPO:0005202"}


id: PBO:0067470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 600, pseudogene","termid":"PBO:0067470"}


id: GO:1900083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Sertoli cell proliferation.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Sertoli cell proliferation (obsolete GO:1900083)","synonyms":[{"name":"regulation of Sertoli cell proliferation","type":"exact"}],"termid":"GO:1900083"}


id: GO:1990571
data:
  {"annotated_genes":["SJAG_00794","SJAG_01805","SJAG_04076","SJAG_02624","SJAG_02814","SJAG_01613","SJAG_02761","SJAG_03540","SJAG_03683"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89924,91440,95342,96502,98558,105254,112028,114220,114735],"is_not":false,"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"The process by which centromeres/kinetochores attach to and migrate along microtubules to become localized to clusters at the spindle pole body during a meiotic prometaphase I.","definition_xrefs":["PMID:9009280","PMID:10366596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"centromere clustering","termid":"GO:0098653"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0051179","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic centromere clustering","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere clustering during meiosis","type":"exact"},{"name":"homologous chromosome movement towards spindle pole in meiosis I prometaphase","type":"exact"}],"termid":"GO:1990571","terms_by_termid":{"GO:1990571":null}}


id: GO:0046095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyinosine, hypoxanthine deoxyriboside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyinosine metabolic process","termid":"GO:0046094"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside biosynthetic process","termid":"GO:0046123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyinosine biosynthetic process","synonyms":[{"name":"deoxyinosine anabolism","type":"exact"},{"name":"deoxyinosine biosynthesis","type":"exact"},{"name":"deoxyinosine formation","type":"exact"},{"name":"deoxyinosine synthesis","type":"exact"}],"termid":"GO:0046095"}


id: PBO:0046480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 5, endonuclease","termid":"PBO:0046480"}


id: PBO:0091261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing, not reproduced","termid":"PBO:0091261"}


id: GO:1902733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the growth of a bone. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["PMID:23212449","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation involved in endochondral bone morphogenesis","termid":"GO:1902738"},{"relation_name":"regulates","term_name":"growth plate cartilage chondrocyte differentiation","termid":"GO:0003418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth plate cartilage chondrocyte differentiation","termid":"GO:1902733"}


id: PBO:0071595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 12","termid":"PBO:0071595"}


id: PBO:0041638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 E","termid":"PBO:0041638"}


id: FYPO:0006938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cables than normal during cytokinesis.","definition_xrefs":["PomBase:mah","PMID:30709916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cables present in increased numbers","termid":"FYPO:0006027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"actin cables present in increased numbers during cytokinesis","synonyms":[{"name":"actin cables present in increased numbers during cytokinesis during mitotic cell cycle","type":"related"},{"name":"actin cables present in increased numbers during cytokinesis during vegetative growth","type":"exact"},{"name":"formin-nucleated actin cables present in increased numbers during cytokinesis","type":"exact"},{"name":"increased level of actin cables during cytokinesis","type":"related"},{"name":"more actin cables present during cytokinesis","type":"exact"}],"termid":"FYPO:0006938"}


