# terms

id: PBO:0038504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 13 (pseudogene)","termid":"PBO:0038504"}


id: PBO:0044875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 4C","termid":"PBO:0044875"}


id: GO:1905022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of threonine-tRNA ligase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:8049265"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of threonine-tRNA ligase activity (obsolete GO:1905022)","synonyms":[{"name":"down regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"down regulation of TRS","type":"related"},{"name":"down regulation of threonine translase activity","type":"exact"},{"name":"down regulation of threonine-tRNA ligase activity","type":"exact"},{"name":"down regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"down regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"down regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"down regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"down-regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"down-regulation of TRS","type":"related"},{"name":"down-regulation of threonine translase activity","type":"exact"},{"name":"down-regulation of threonine-tRNA ligase activity","type":"exact"},{"name":"down-regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"down-regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"down-regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"downregulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"downregulation of TRS","type":"related"},{"name":"downregulation of threonine translase activity","type":"exact"},{"name":"downregulation of threonine-tRNA ligase activity","type":"exact"},{"name":"downregulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"downregulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"downregulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"downregulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"inhibition of L-threonine:tRNAThr ligase (AMP-forming)","type":"narrow"},{"name":"inhibition of TRS","type":"related"},{"name":"inhibition of threonine translase activity","type":"narrow"},{"name":"inhibition of threonine-tRNA ligase activity","type":"narrow"},{"name":"inhibition of threonine-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"inhibition of threonyl ribonucleic synthetase activity","type":"narrow"},{"name":"inhibition of threonyl-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of threonyl-transfer RNA synthetase activity","type":"narrow"},{"name":"inhibition of threonyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"inhibition of threonyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"negative regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"negative regulation of TRS","type":"related"},{"name":"negative regulation of threonine translase activity","type":"exact"},{"name":"negative regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"negative regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"negative regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"negative regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"negative regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905022"}


id: PBO:0043478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canopy FGF signaling regulator 1","termid":"PBO:0043478"}


id: GO:0015818
data:
  {"annotated_genes":["SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98920,106134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"}]},"cv_name":"biological_process","definition":"The directed movement of isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid transport","termid":"GO:0015803"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"isoleucine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine transport","type":"narrow"}],"termid":"GO:0015818","terms_by_termid":{"GO:1903714":null}}


id: GO:1904401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Thyroid stimulating hormone stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:11238928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to Thyroid stimulating hormone","termid":"GO:1904400"},{"relation_name":"is_a","term_name":"cellular response to glycoprotein","termid":"GO:1904588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to Thyroid stimulating hormone","termid":"GO:1904401"}


id: GO:0050781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trichlorophenol + 2 H+ + 2 e- = 2,4-dichlorophenol + HCl.","definition_xrefs":["PMID:12697029","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ortho-trichlorophenol reductive dehalogenase activity","synonyms":[{"name":"2,4,6-TCP reductive dehalogenase activity","type":"exact"},{"name":"2,4,6-trichlorophenol reductive dehalogenase activity","type":"exact"}],"termid":"GO:0050781"}


id: GO:0032405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MutLalpha mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex binding","termid":"GO:0032404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MutLalpha complex binding","termid":"GO:0032405"}


id: PBO:0051295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-22 (pseudogene)","termid":"PBO:0051295"}


id: PBO:0088975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, implicated in translation or RNA processing, human TTC27 ortholog","termid":"PBO:0088975"}


id: GO:0016620
data:
  {"annotated_genes":["SJAG_00234","SJAG_03293","SJAG_00027","SJAG_06621","SJAG_03786","SJAG_00869","SJAG_02945","SJAG_03903","SJAG_03828","SJAG_00660","SJAG_02135","SJAG_00482","SJAG_02235","SJAG_00636","SJAG_00674","SJAG_06622","SJAG_02961"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003842"},{"annotations":[96985,102922,75173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004029"},{"annotations":[111887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004073"},{"annotations":[96282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004350"},{"annotations":[105062,105511,105059,105508,105057,105061,105509,105512,105058,105063,105510,105514,105060,105513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004365"},{"annotations":[97318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004043"},{"annotations":[94295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003942"},{"annotations":[83616,84595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004777"},{"annotations":[83617,84596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036243"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00482":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00674":null,"SJAG_00869":null,"SJAG_02135":null,"SJAG_02235":null,"SJAG_02945":null,"SJAG_02961":null,"SJAG_03293":null,"SJAG_03786":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1222583","EC:1.2.1.-"],"termid":"GO:0016620","terms_by_termid":{"GO:0003842":null,"GO:0003942":null,"GO:0004029":null,"GO:0004043":null,"GO:0004073":null,"GO:0004350":null,"GO:0004365":null,"GO:0004777":null,"GO:0036243":null}}


id: PBO:0042933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell growth regulator with ring finger domain 1","termid":"PBO:0042933"}


id: GO:0015884
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904947"}]},"cv_name":"biological_process","definition":"The directed movement of folic acid (pteroylglutamic acid) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"folic acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"folate transport","type":"exact"},{"name":"vitamin B9 transport","type":"exact"},{"name":"vitamin M transport","type":"exact"}],"termid":"GO:0015884","terms_by_termid":{"GO:1904947":null}}


id: GO:2000055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000055)","synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000055"}


id: PR:O42937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit beta' that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04096","PANTHER:PTHR19876:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit beta' (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.13c","secondary_identifiers":["UniProtKB:O42937"],"synonyms":[{"name":"Spom972h-COPB2","type":"exact"},{"name":"beta'-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta'-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42937"}


id: GO:0007599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemostasis","secondary_identifiers":["Wikipedia:Hemostasis"],"termid":"GO:0007599"}


id: PBO:0083120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dock family protein (Dedicator Of CytoKinesis), homolog of human DOCK1; upstream component for regulation through the small GTPase Rho5p; may form a complex with Lmo1p that acts as a GEF for Rho5p; interacts with Ino4p; cytoplasmic protein that relocates to mitochondria under oxidative stress; implicated in mitophagy; not an essential protein; DOCK proteins act as guanine nucleotide exchange factors","termid":"PBO:0083120"}


id: PBO:0038410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-characteristic_of_part_of","termid":"PBO:0038410"}


id: PBO:0090664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF, N-terminal (4F5-like)","termid":"PBO:0090664"}


id: GO:0007462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the R1/R6 photoreceptors commit to their cell fate. R1 and R6 are paired photoreceptors which contribute the outer rhabdomeres.","definition_xrefs":["PMID:3076112","PMID:3937883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor fate commitment","termid":"GO:0001752"},{"relation_name":"part_of","term_name":"R1/R6 cell differentiation","termid":"GO:0048052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R1/R6 cell fate commitment","termid":"GO:0007462"}


id: SO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the mitochondrion.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"mitochondrial_targeting_signal","synonyms":[{"name":"MTS","type":"exact"},{"name":"mitochondrial signal sequence","type":"exact"},{"name":"mitochondrial targeting signal","type":"exact"}],"termid":"SO:0001808"}


id: PATO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that inheres in a molecular entity by virtue of the presence of a conjugated ring of unsaturated bonds, lone pairs, or empty orbitals that exhibit a stabilization stronger than would be expected by the stabilization of conjugation alone.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromaticity","termid":"PATO:0002190"}


id: GO:0050026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-glycol + NAD(P)+ = a 2-hydroxycarbonyl compound + NAD(P)H + H+.","definition_xrefs":["MetaCyc:L-GLYCOL-DEHYDROGENASE-RXN","EC:1.1.1.185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-glycol dehydrogenase activity","synonyms":[{"name":"L-(+)-glycol:NAD(P) oxidoreductase activity","type":"related"},{"name":"L-glycol:NAD(P) dehydrogenase activity","type":"related"},{"name":"L-glycol:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"glycol (nicotinamide adenine dinucleotide (phosphate)) dehydrogenase activity","type":"related"}],"termid":"GO:0050026"}


id: PBO:0109085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta 1 like, pseudogene","termid":"PBO:0109085"}


id: PBO:0071254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 95","termid":"PBO:0071254"}


id: GO:1904055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte proliferation.","definition_xrefs":["GO_REF:0000058","PMID:24434010","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte proliferation","termid":"GO:1904054"},{"relation_name":"negatively_regulates","term_name":"cholangiocyte proliferation","termid":"GO:1990705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholangiocyte proliferation","synonyms":[{"name":"down regulation of cholangiocyte proliferation","type":"exact"},{"name":"down regulation of hepatoblast proliferation","type":"exact"},{"name":"down-regulation of cholangiocyte proliferation","type":"exact"},{"name":"down-regulation of hepatoblast proliferation","type":"exact"},{"name":"downregulation of cholangiocyte proliferation","type":"exact"},{"name":"downregulation of hepatoblast proliferation","type":"exact"},{"name":"inhibition of cholangiocyte proliferation","type":"narrow"},{"name":"inhibition of hepatoblast proliferation","type":"narrow"},{"name":"negative regulation of hepatoblast proliferation","type":"exact"}],"termid":"GO:1904055"}


id: GO:2000720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034184"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:2000718"},{"relation_name":"positively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:0071960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"positive regulation of maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"positive regulation of maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:2000720"}


id: FYPO:0002191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is shaped in the form of a spheroid, has one or more septa, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen spheroid vegetative cell","termid":"FYPO:0002190"},{"relation_name":"is_a","term_name":"swollen septated spheroid vegetative cell","termid":"FYPO:0002240"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable swollen septated spheroid vegetative cell","synonyms":[{"name":"inviable enlarged septated spheroid vegetative cell","type":"related"},{"name":"inviable enlarged volume septated spheroid vegetative cell","type":"exact"},{"name":"inviable septated large spheroid vegetative cell","type":"related"},{"name":"inviable swollen septated rounded vegetative cell","type":"exact"},{"name":"inviable swollen septated spheroid cell during vegetative growth","type":"exact"},{"name":"inviable swollen septated spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable, septated, increased spheroid vegetative cell size","type":"related"},{"name":"inviable, septated, increased spheroid vegetative cell volume","type":"exact"},{"name":"lethal; swollen septated spheroid vegetative cell","type":"exact"}],"termid":"FYPO:0002191"}


id: PBO:0077680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 11","termid":"PBO:0077680"}


id: GO:0070673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-18 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-18","synonyms":[{"name":"response to IL-18","type":"exact"}],"termid":"GO:0070673"}


id: PBO:0074232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC47A1 pseudogene 1","termid":"PBO:0074232"}


id: PBO:0003609
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.3.1.1","termid":"PBO:0003609"}


id: GO:0009184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleoside diphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate catabolic process","termid":"GO:0009137"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009182"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleoside diphosphate catabolic process","synonyms":[{"name":"purine deoxyribonucleoside diphosphate breakdown","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate catabolism","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009184"}


id: GO:0043212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carbohydrate(in) -> ADP + phosphate + carbohydrate(out).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"carbohydrate-exporting ABC transporter activity","synonyms":[{"name":"carbohydrate-exporting ATPase activity","type":"broad"}],"termid":"GO:0043212"}


id: PBO:0058922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7b","termid":"PBO:0058922"}


id: GO:0033810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + pelargonidin 3-O-(6-caffeoyl-beta-D-glucoside) 5-O-beta-D-glucoside = CoA + 4'''-demalonylsalvianin.","definition_xrefs":["EC:2.3.1.172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"anthocyanin 5-O-glucoside 6'''-O-malonyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.172-RXN","RHEA:21988"],"synonyms":[{"name":"Ss5MaT1","type":"related"},{"name":"malonyl-CoA:pelargonidin-3-O-(6-caffeoyl-beta-D-glucoside)-5-O-beta-D-glucoside 6'''-O-malonyltransferase activity","type":"related"}],"termid":"GO:0033810"}


id: PBO:0080835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ybeY metalloendoribonuclease","termid":"PBO:0080835"}


id: PBO:0053719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 929","termid":"PBO:0053719"}


id: PBO:0048665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G kinase anchoring protein 1","termid":"PBO:0048665"}


id: PBO:0066634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIMS binding protein 2","termid":"PBO:0066634"}


id: GO:0061426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter and activates or increases the frequency, rate or extent of sulfite transport.","definition_xrefs":["GOC:dph","PMID:10234785","PMID:10870099"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061426)","termid":"GO:0061426"}


id: PBO:0028026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_meiosis_II","termid":"PBO:0028026"}


id: GO:1902806
data:
  {"annotated_genes":["SJAG_00169","SJAG_02026","SJAG_01210","SJAG_02723","SJAG_01825","SJAG_03591","SJAG_00991","SJAG_03681","SJAG_00996","SJAG_03699","SJAG_01401","SJAG_01311","SJAG_02404","SJAG_05346","SJAG_03048","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104998,112006,98481,85109,97738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[87438,105786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[104999,85110,87865,89445,94997,88283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"},{"annotations":[97740,113165,102068,102761,101913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[102069,87869,113167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000045"},{"annotations":[105004,97742,87871,111438,102071,112008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any signaling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle phase transition","termid":"GO:1901987"},{"relation_name":"regulates","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02026":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902806","terms_by_termid":{"GO:0007089":null,"GO:0031568":null,"GO:0031571":null,"GO:1900087":null,"GO:2000045":null,"GO:2000134":null}}


id: PBO:0030839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_adenine_import","termid":"PBO:0030839"}


id: PBO:0044764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 47","termid":"PBO:0044764"}


id: PBO:0002368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterised trans-sulfuration enzyme (predicted)","termid":"PBO:0002368"}


id: GO:0034445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lipoprotein particle oxidation, occurring in the blood plasma.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma lipoprotein oxidation","termid":"GO:0034444"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"plasma lipoprotein particle oxidation","termid":"GO:0034441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma lipoprotein oxidation","synonyms":[{"name":"inhibition of plasma lipoprotein oxidation","type":"narrow"},{"name":"negative regulation of plasma lipoprotein particle oxidation","type":"related"}],"termid":"GO:0034445"}


id: GO:0004308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.","definition_xrefs":["EC:3.2.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-sialidase activity","termid":"GO:0016997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"exo-alpha-sialidase activity","secondary_identifiers":["Reactome:R-HSA-1605724","Reactome:R-HSA-4085029","Reactome:R-HSA-4084994","Reactome:R-HSA-9638120","Reactome:R-HSA-4341669","Reactome:R-HSA-4084999","MetaCyc:3.2.1.18-RXN","Reactome:R-HSA-168870","Reactome:R-HSA-1605768","Reactome:R-HSA-1605723"],"synonyms":[{"name":"N-acylneuraminate glycohydrolase activity","type":"related"},{"name":"acetylneuraminidase activity","type":"related"},{"name":"acetylneuraminyl hydrolase activity","type":"related"},{"name":"alpha-neuraminidase activity","type":"related"},{"name":"neuraminidase activity","type":"related"},{"name":"sialidase activity","type":"related"}],"termid":"GO:0004308"}


id: GO:0075265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of oogonium development, a process that leads to the formation of a female gametangium of oomycetes, containing one or more gametes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of oogonium development","termid":"GO:0075264"},{"relation_name":"positively_regulates","term_name":"oogonium development","termid":"GO:0075263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oogonium development","termid":"GO:0075265"}


id: PBO:0000985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase (predicted)","termid":"PBO:0000985"}


id: SO:0001793
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read from an end of the clone sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"},{"relation_name":"part_of","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone_end","synonyms":[{"name":"clone end","type":"exact"}],"termid":"SO:0001793"}


id: PBO:0091985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf22 (frameshifted)","termid":"PBO:0091985"}


id: GO:0050358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + pseudotropine = H+ + NADPH + tropinone.","definition_xrefs":["EC:1.1.1.236","RHEA:24244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tropinone reductase activity","secondary_identifiers":["KEGG_REACTION:R06734","MetaCyc:TROPINONE-REDUCTASE-RXN"],"synonyms":[{"name":"pseudotropine forming tropinone reductase activity","type":"related"},{"name":"pseudotropine:NADP+ 3-oxidoreductase activity","type":"related"},{"name":"tropinone (psi-tropine-forming) reductase activity","type":"related"},{"name":"tropinone reductase II activity","type":"related"}],"termid":"GO:0050358"}


id: GO:0071622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of granulocyte chemotaxis. Granulocyte chemotaxis is the movement of a granulocyte in response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"regulates","term_name":"granulocyte chemotaxis","termid":"GO:0071621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"}


id: GO:0140749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phlorizin + H2O = beta-D-glucose + phloretin.","definition_xrefs":["PMID:9762914","RHEA:69639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phlorizin hydrolase activity","termid":"GO:0140749"}


id: PBO:0088270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-b","termid":"PBO:0088270"}


id: PBO:0111817
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT1 subfamily","termid":"PBO:0111817"}


id: PBO:0004597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6 (predicted)","termid":"PBO:0004597"}


id: PATO:0001539
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A compositional quality inhering in an bearer by virtue of the bearer's quantities or relative ratios of amylose of the inhering entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylose composition","synonyms":[{"name":"amylose compositionality","type":"exact"}],"termid":"PATO:0001539"}


id: PATO:0001807
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity to irradiation which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitivity to irradiation","termid":"PATO:0001806"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased sensitivity to irradiation","synonyms":[{"name":"low sensitivity to irradiation","type":"exact"}],"termid":"PATO:0001807"}


id: PBO:0046518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lipid raft associated 2","termid":"PBO:0046518"}


id: PBO:0045315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA nucleotidylexotransferase","termid":"PBO:0045315"}


id: PBO:0046266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 4","termid":"PBO:0046266"}


id: PBO:0027868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_oscillation_during_mitotic_cell_cycle","termid":"PBO:0027868"}


id: PBO:0000118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght3","termid":"PBO:0000118"}


id: GO:0072725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 4-nitroquinoline N-oxide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to 4-nitroquinoline N-oxide","termid":"GO:0072724"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 4-nitroquinoline N-oxide","termid":"GO:0072725"}


id: GO:0120079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of microfilament motor activity.","definition_xrefs":["PMID:20705471","PMID:8621557","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microfilament motor activity (obsolete GO:0120079)","synonyms":[{"name":"regulation of actin filament motor activity","type":"exact"},{"name":"regulation of actin-activated ATPase activity","type":"related"},{"name":"regulation of actin-dependent ATPase activity","type":"related"},{"name":"regulation of actin-filament motor activity","type":"exact"},{"name":"regulation of muscle motor activity","type":"narrow"},{"name":"regulation of myosin ATPase activity","type":"related"}],"termid":"GO:0120079"}


id: PBO:0078179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-3","termid":"PBO:0078179"}


id: GO:0090134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells from one site to another that contributes to the migration of mesendodermal tissue.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"mesendoderm migration","termid":"GO:0090133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}


id: PBO:0091514
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae Mid Two-Like","termid":"PBO:0091514"}


id: GO:0042416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine biosynthetic process","termid":"GO:0042423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine biosynthetic process","synonyms":[{"name":"dopamine anabolism","type":"exact"},{"name":"dopamine biosynthesis","type":"exact"},{"name":"dopamine formation","type":"exact"},{"name":"dopamine synthesis","type":"exact"}],"termid":"GO:0042416"}


id: PBO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency of long tract gene conversion in the rhp57 delta single mutant was suppressed in the swi5delta rhp57delta double mutant, to a level similar to that observed in the rhp51 mutant","termid":"PBO:0001351"}


id: PBO:0086261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates phospholipid asymmetry at plasma membrane; may act to generate normal levels of PI4P; may act together with or upstream of Stt4p; at least partially mediates proper localization of Stt4p to the plasma membrane","termid":"PBO:0086261"}


id: PBO:0001560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp101 (predicted)","termid":"PBO:0001560"}


id: FYPO:0006599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006599"}


id: PBO:0083858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1F0 ATP synthase peripheral stalk assembly factor; subunit of the matrix-exposed inner mitochondrial membrane localized INA complex (Ina22p-Ina17p) involved in assembly of the F1F0 peripheral stalk; co-purifies with Aim43p, ATP synthase subunits, and cytochrome bc1 complex assembly factors; interacts with Arh1p, a mitochondrial oxidoreductase; deletion mutant has a respiratory growth defect","termid":"PBO:0083858"}


id: GO:0018449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-1-phenylethanol + NAD+ = acetophenone + H+ + NADH.","definition_xrefs":["RHEA:28198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-phenylethanol dehydrogenase activity","secondary_identifiers":["EC:1.1.1.311","UM-BBD_reactionID:r0032"],"termid":"GO:0018449"}


id: PBO:0036444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dom34-Hbs1 translation release factor complex subunit Hbs1 (predicted)","termid":"PBO:0036444"}


id: GO:0070637
data:
  {"annotated_genes":["SJAG_03096","SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[109206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[104611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any pyridine nucleoside, a nucleoside in which a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03096":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyridine nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleoside metabolism","type":"exact"}],"termid":"GO:0070637","terms_by_termid":{"GO:0046495":null,"GO:0071590":null,"GO:0071592":null}}


id: PBO:0075344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin 1","termid":"PBO:0075344"}


id: PBO:0068620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 72, pseudogene","termid":"PBO:0068620"}


id: PBO:0082211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,6-mannosyltransferase localized to the ER; responsible for addition of alpha-1,6 mannose to dolichol-linked Man7GlcNAc2; acts in the dolichol pathway for N-glycosylation; human homolog ALG12 complements yeast null mutant","termid":"PBO:0082211"}


id: SO:1001277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The recoding stimulatory signal located downstream of the recoding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_recoding_site","synonyms":[{"name":"three prime recoding site","type":"exact"}],"termid":"SO:1001277"}


id: FYPO:0007120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to leucine starvation does not occur; arrest normally occurs in G1 phase.","definition_xrefs":["PomBase:mah","PMID:31456006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine starvation","synonyms":[{"name":"abolished cell cycle arrest in mitotic G1 phase during cellular response to leucine starvation","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine depletion","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine deprivation","type":"exact"},{"name":"abolished leucine deprivation-induced G1 arrest","type":"exact"},{"name":"abolished mitotic G1 arrest in response to leucine starvation","type":"exact"},{"name":"abolished mitotic cell cycle arrest in G1 phase in response to leucine starvation","type":"exact"},{"name":"cell cycle arrest in mitotic G1 phase in response to leucine starvation abolished","type":"exact"}],"termid":"FYPO:0007120"}


id: PBO:0081257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 26","termid":"PBO:0081257"}


id: PBO:0065328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 52, pseudogene","termid":"PBO:0065328"}


id: GO:1990273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which a 2,2,7-trimethylguanosine cap structure is added to the 5' end of an snRNA. The snRNA capping process includes the formation of 7-methyl-G caps found on all RNA polymerase II transcripts, followed by hypermethylation at the 2' position of the guanosine residue to convert a mono-methylated cap to a 2,2,7-trimethylguanosine cap structure. Note that the pol III transcribed U6 snRNA is also TMG capped.","definition_xrefs":["GOC:vw","PMID:15590684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA processing","termid":"GO:0016180"},{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0016073","GO:0010467"],"is_obsolete":false,"name":"snRNA 2,2,7-trimethylguanosine (TMG) capping","synonyms":[{"name":"snRNA 2,2,7-trimethylguanosine (TMG) cap formation","type":"exact"},{"name":"snRNA 5'-end processing","type":"broad"},{"name":"snRNA capping","type":"exact"}],"termid":"GO:1990273"}


id: PBO:0034787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex beta subunit Apl1 (predicted)","termid":"PBO:0034787"}


id: PBO:0089760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator, RecA family ATPase Rad55/Rhp55","termid":"PBO:0089760"}


id: GO:0031478
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a dimer of class VIII myosin heavy chains and associated light chains. Myosin VIII is predicted to be dimeric, and contain an unusual 100-190 residue N-terminal extension prior to their motor domains, 3-4 IQ motifs, a short region (~70 residues) of predicted alpha-helical coiled coil and a C-terminal domain.","definition_xrefs":["PMID:25247701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"myosin VIII complex","termid":"GO:0031478"}


id: PBO:0086495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative phosphopyruvate hydratase","termid":"PBO:0086495"}


id: SO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding tyrosyl tRNA (SO:000272).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine_tRNA_primary_transcript","synonyms":[{"name":"tyrosine tRNA primary transcript","type":"exact"}],"termid":"SO:0000229"}


id: PBO:0077315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM51 antisense RNA 2","termid":"PBO:0077315"}


id: PBO:0000507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase activating kinase Csk1","termid":"PBO:0000507"}


id: PBO:0086031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, abundance changes with carbon source","termid":"PBO:0086031"}


id: PBO:0028326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028326"}


id: PATO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having parallel chains in undulate fashion on the border.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curled","termid":"PATO:0000405"}


id: FYECO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which phloxine B was added to the medium or assay buffer in excess.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ phloxine B","termid":"FYECO:0000334"}


id: FYPO:0000290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle that affects DNA-dependent transcription.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"transcription phenotype during vegetative growth","synonyms":[{"name":"transcription phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000290"}


id: PBO:0068407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 227","termid":"PBO:0068407"}


id: PBO:0030414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistant_to_cell_wall_digestion","termid":"PBO:0030414"}


id: GO:1900778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of fumiquinazoline A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline A biosynthetic process (obsolete GO:1900778)","synonyms":[{"name":"fumiquinazoline A anabolism","type":"exact"},{"name":"fumiquinazoline A biosynthesis","type":"exact"},{"name":"fumiquinazoline A formation","type":"exact"},{"name":"fumiquinazoline A synthesis","type":"exact"}],"termid":"GO:1900778"}


id: GO:0005986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sucrose, the disaccharide fructofuranosyl-glucopyranoside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose metabolic process","termid":"GO:0005985"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sucrose biosynthetic process","secondary_identifiers":["MetaCyc:SUCSYN-PWY"],"synonyms":[{"name":"sucrose anabolism","type":"exact"},{"name":"sucrose biosynthesis","type":"exact"},{"name":"sucrose formation","type":"exact"},{"name":"sucrose synthesis","type":"exact"}],"termid":"GO:0005986"}


id: PBO:0076710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 12","termid":"PBO:0076710"}


id: MOD:00133
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamine residue and an L-lysine residue by an isopeptide bond with the formation of N6-(L-isoglutamyl)-L-lysine and the release of ammonia.","definition_xrefs":["ChEBI:21863","DeltaMass:0","PubMed:5656070","PubMed:8598899","RESID:AA0124#GLN","PubMed:2461365","PubMed:5637041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"N6-(L-isoglutamyl)-L-lysine","termid":"MOD:01630"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-isoglutamyl)-L-lysine (Gln)","synonyms":[{"name":"(2S)-2-amino-6-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"2-azanyl-6-([4-azanyl-4-carboxybutanoyl]azanyl)hexanoic acid","type":"exact"},{"name":"5-glutamyl N6-lysine","type":"exact"},{"name":"CROSSLNK Isoglutamyl lysine isopeptide (Lys-Gln)","type":"exact"},{"name":"N alpha -(gamma-Glutamyl)-lysine","type":"exact"},{"name":"N(epsilon)-(gamma-glutamyl)lysine","type":"exact"},{"name":"N6-(L-isoglutamyl)-L-lysine","type":"exact"},{"name":"XLNK-N6Lys-5Glu(Gln)","type":"exact"}],"termid":"MOD:00133"}


id: MOD:01543
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01543"}


id: PBO:0072675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTRAF pseudogene 2","termid":"PBO:0072675"}


id: PBO:0088041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); catalytic subunit of SCF ubiquitin-protein ligase complex (together with Skp1p, Rbx1p, Cdc53p, and an F-box protein) that regulates cell cycle progression by targeting key substrates for degradation; protein abundance increases in response to DNA replication stress; human CDC34 functionally complements the thermosensitivity of the cdc34-2 mutant","termid":"PBO:0088041"}


id: PBO:0068447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 21, pseudogene","termid":"PBO:0068447"}


id: GO:0023066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the vascular system.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via vascular system (obsolete GO:0023066)","synonyms":[{"name":"signal transmission via vascular system","type":"exact"}],"termid":"GO:0023066"}


id: GO:0103032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-glycerate + NAD = H+ + 2-hydroxy-3-oxopropanoate + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete tartronate semialdehyde reductase activity (obsolete GO:0103032)","termid":"GO:0103032"}


id: PBO:0087999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tubulin folding factor D involved in beta-tubulin (Tub2p) folding; isolated as mutant with increased chromosome loss and sensitivity to benomyl","termid":"PBO:0087999"}


id: PBO:0046937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM53B antisense RNA 1","termid":"PBO:0046937"}


id: PBO:0069510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 778, pseudogene","termid":"PBO:0069510"}


id: PBO:0076436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 12","termid":"PBO:0076436"}


id: PBO:0054839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2253","termid":"PBO:0054839"}


id: PBO:0017772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transmembrane transporter (predicted)","termid":"PBO:0017772"}


id: PBO:0086363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aldose 1-epimerase","termid":"PBO:0086363"}


id: GO:0000978
data:
  {"annotated_genes":["SJAG_04712","SJAG_00210","SJAG_06576","SJAG_01930","SJAG_02138","SJAG_05006","SJAG_02569","SJAG_00802","SJAG_01441","SJAG_04813","SJAG_01307","SJAG_03519","SJAG_02730","SJAG_03622","SJAG_04388","SJAG_00163","SJAG_02938","SJAG_04009","SJAG_00693","SJAG_04249","SJAG_00926","SJAG_01343","SJAG_00124","SJAG_04749","SJAG_05247","SJAG_03879","SJAG_02149","SJAG_01740","SJAG_02218","SJAG_02956","SJAG_00861","SJAG_05288","SJAG_04855","SJAG_02406","SJAG_02709","SJAG_05153","SJAG_01062","SJAG_02052","SJAG_03388","SJAG_00979","SJAG_00386","SJAG_02472","SJAG_00792","SJAG_00266","SJAG_00304","SJAG_04036","SJAG_02048","SJAG_02326","SJAG_04421","SJAG_04092","SJAG_05337","SJAG_04191","SJAG_00037","SJAG_03473","SJAG_04584","SJAG_03346","SJAG_01694","SJAG_01243","SJAG_02810","SJAG_03143","SJAG_03241","SJAG_01583","SJAG_01725","SJAG_03918","SJAG_02311","SJAG_01532","SJAG_00987","SJAG_05343","SJAG_03484","SJAG_03183","SJAG_04839","SJAG_03735","SJAG_06599","SJAG_02252","SJAG_00698","SJAG_00664","SJAG_03911","SJAG_03538","SJAG_01157"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77141,79301,83767,84136,84206,84576,84631,85203,85620,86251,88042,88590,88877,89358,89418,89841,90196,90855,90872,91830,92177,92418,92710,93063,93195,93437,93514,93663,93664,93665,93666,93667,94249,94556,95622,95923,96243,96615,97605,98167,98351,98403,98815,99679,100559,100564,100884,101942,102214,102356,102471,102834,103108,103162,103690,104088,104334,104747,104919,105163,105299,105300,105468,105807,106841,106979,106995,107011,107170,107995,108036,108037,109519,109798,110196,110687,110941,112184,112580,112718,113578,114142,114426],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[103163,104920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding","termid":"GO:0000977"},{"relation_name":"is_a","term_name":"cis-regulatory region sequence-specific DNA 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polymerase II cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000980"],"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase II distal enhancer sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase II promoter proximal region sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase II upstream activating sequence (UAS) sequence-specific DNA binding","type":"related"}],"termid":"GO:0000978","terms_by_termid":{"GO:0000978":null,"GO:0044377":null}}


id: FYPO:0000486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of meiotic recombination","synonyms":[{"name":"delayed meiotic recombination","type":"exact"},{"name":"meiotic recombination: delayed","type":"related"}],"termid":"FYPO:0000486"}


id: GO:0061250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesonephric glomerular epithelial cell. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelium development","termid":"GO:0061232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}


id: PBO:0029896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint","termid":"PBO:0029896"}


id: GO:0140076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lipoprotein transport.","definition_xrefs":["GOC:BHF_miRNA","GOC:RPH","GOC:BHF","PMID:26501192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"regulation of lipoprotein transport","termid":"GO:0140075"},{"relation_name":"negatively_regulates","term_name":"lipoprotein transport","termid":"GO:0042953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein transport","termid":"GO:0140076"}


id: FYPO:0006945
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_02763:allele-6":{"allele_type":"amino_acid_mutation","description":"S499A; S538A; T620A; T638A; S651A","gene_uniquename":"SJAG_02763","name":"ned1-5A","synonyms":[{"name":"refractory to potential proline-directed kinase phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-6"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115628,115635],"is_not":false,"summary":null,"term":"FYPO:0006945"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of lipid droplet formation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"lipid droplets present in decreased numbers","termid":"FYPO:0002552"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5A(S499A; S538A; T620A; T638A; S651A aa)","display_uniquename":"ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-6","expression":"Not assayed or wild type"}]}]},"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased lipid droplet formation","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_02763"],"single_locus_genotype_uniquenames":["ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased lipid droplet assembly","type":"exact"},{"name":"increased lipid particle formation","type":"exact"}],"termid":"FYPO:0006945","terms_by_termid":{"FYPO:0006945":null,"FYPO_EXT:0000001":null}}


id: PBO:0005342
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.33","termid":"PBO:0005342"}


id: PBO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutive","termid":"PBO:0000372"}


id: PBO:0063423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4B antisense RNA 1","termid":"PBO:0063423"}


id: PBO:0085718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in synthesis of the thiamine precursor HMP; member of a subtelomeric gene family including THI5, THI11, THI12, and THI13; hydroxymethylpyrimidine is also known as HMP","termid":"PBO:0085718"}


id: PBO:0016515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stretch-activated calcium channel Yam8","termid":"PBO:0016515"}


id: PBO:0029633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers_at_cell_tip_during_cell_growth","termid":"PBO:0029633"}


id: PBO:0042320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD40 molecule","termid":"PBO:0042320"}


id: FYPO:0000540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein transport","termid":"FYPO:0005744"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein transport during vegetative growth","synonyms":[{"name":"abnormal protein transport during mitotic cell cycle","type":"related"},{"name":"protein transport: abnormal","type":"related"}],"termid":"FYPO:0000540"}


id: PBO:0079142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 5","termid":"PBO:0079142"}


id: PBO:0042926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 5","termid":"PBO:0042926"}


id: PBO:0083524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RRP15, which is required for ribosomal RNA processing","termid":"PBO:0083524"}


id: FYPO:0006798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to the nuclear MIS12/MIND complex is normal (i.e. indistinguishable from wild type). The protein whose binding to the complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PMID:29180432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal nuclear MIS12/MIND complex binding","synonyms":[{"name":"normal nuclear MIS12/MIND complex binding during mitotic cell cycle","type":"related"},{"name":"normal nuclear MIS12/MIND complex binding during vegetative growth","type":"exact"}],"termid":"FYPO:0006798"}


id: GO:0051627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of epinephrine uptake","termid":"GO:0051626"},{"relation_name":"negatively_regulates","term_name":"epinephrine uptake","termid":"GO:0051625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of epinephrine uptake","synonyms":[{"name":"down regulation of epinephrine uptake","type":"exact"},{"name":"down-regulation of epinephrine uptake","type":"exact"},{"name":"downregulation of epinephrine uptake","type":"exact"},{"name":"negative regulation of adrenaline uptake","type":"exact"},{"name":"negative regulation of epinephrine import","type":"exact"}],"termid":"GO:0051627"}


id: GO:0048677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single axon process involved in regeneration of the neuron.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon extension","termid":"GO:0048675"},{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon extension involved in regeneration","termid":"GO:0048677"}


id: PBO:0067731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 29","termid":"PBO:0067731"}


id: PBO:0061020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3","termid":"PBO:0061020"}


id: GO:0019477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:go_curators","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine catabolic process","termid":"GO:0006554"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"},{"relation_name":"is_a","term_name":"L-lysine metabolic process","termid":"GO:0046440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"L-lysine catabolic process","synonyms":[{"name":"L-lysine breakdown","type":"exact"},{"name":"L-lysine catabolism","type":"exact"},{"name":"L-lysine degradation","type":"exact"}],"termid":"GO:0019477"}


id: PBO:0065996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like proto-oncogene A","termid":"PBO:0065996"}


id: GO:0140502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of host salicylic acid-mediated innate immune signaling.","definition_xrefs":["PMID:25438793","PMID:30651637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of defense-related host salicylic acid-mediated signal transduction pathway","termid":"GO:0052003"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host innate immune response by symbiont","termid":"GO:0140404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"effector-mediated suppression of host salicylic acid-mediated innate immune signaling","synonyms":[{"name":"effector-mediated disruption of host salicylic acid-mediated innate immune signalling","type":"exact"},{"name":"effector-mediated suppression of host salicylic acid-mediated innate immune signalling","type":"exact"}],"termid":"GO:0140502"}


id: FYPO:0004811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II is abnormal. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["GO:0006369","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase II transcription","synonyms":[{"name":"abnormal RNA polymerase II transcription termination","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0004811"}


id: GO:0044647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An occluding cell-cell junction formed between the membranes of the apical end of an invading cell (e.g. a merozoite in Plasmodium) and a host target cell (e.g. erythrocyte for Plasmodium infection). The junction is a stable yet dynamic structure that moves around the symbiont cell during invasion, enclosing it in a vacuole surrounded by a membrane.","definition_xrefs":["GOC:jl","PMID:21803641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicellular tight junction","termid":"GO:0005923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host-symbiont bicellular tight junction","synonyms":[{"name":"host-parasite tight junction","type":"exact"},{"name":"host-pathogen tight junction","type":"exact"}],"termid":"GO:0044647"}


id: PBO:0000630
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergently orientated to functionally related gene","termid":"PBO:0000630"}


id: GO:0016707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a gibberellin + 2-oxoglutarate + O2 = a 3-beta-hydroxy-gibberellin + succinate + CO2.","definition_xrefs":["EC:1.14.11.15","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gibberellin 3-beta-dioxygenase activity","secondary_identifiers":["MetaCyc:RXN1F-170","RHEA:10104"],"synonyms":[{"name":"(gibberellin-20),2-oxoglutarate:oxygen oxidoreductase (3beta-hydroxylating)","type":"narrow"},{"name":"(gibberrellin-20),2-oxoglutarate: oxygen oxidoreductase (3beta-hydroxylating)","type":"narrow"},{"name":"gibberellin 3-beta-hydroxylase activity","type":"related"},{"name":"gibberellin 3beta-dioxygenase activity","type":"related"},{"name":"gibberellin 3beta-hydroxylase activity","type":"related"}],"termid":"GO:0016707"}


id: PBO:0064038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 72","termid":"PBO:0064038"}


id: PATO:0001918
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and abdomen of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posteroventral to","termid":"PATO:0001918"}


id: PBO:0056419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1","termid":"PBO:0056419"}


id: GO:0009108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of coenzymes, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme biosynthetic process (obsolete GO:0009108)","synonyms":[{"name":"coenzyme anabolism","type":"exact"},{"name":"coenzyme and prosthetic group biosynthesis","type":"broad"},{"name":"coenzyme and prosthetic group biosynthetic process","type":"broad"},{"name":"coenzyme biosynthesis","type":"exact"},{"name":"coenzyme formation","type":"exact"},{"name":"coenzyme synthesis","type":"exact"}],"termid":"GO:0009108"}


id: PBO:0028698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process","termid":"PBO:0028698"}


id: PBO:0086112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for bud growth; involved in transport of cell wall components from the Golgi to the cell surface; SBE2 has a paralog, SBE22, that arose from the whole genome duplication","termid":"PBO:0086112"}


id: GO:0032194
data:
  {"annotated_genes":["SJAG_00933"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104277],"is_not":false,"summary":null,"term":"GO:0032194"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ubiquinone, via the intermediates 3,4-dihydroxy-5-polyprenylbenzoate and 3-methoxy-4-hydroxy-5-polyprenylbenzoate.","definition_xrefs":["GOC:mah","PMID:11583838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006744"}],"interesting_parent_ids":["GO:0006744","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032194","terms_by_termid":{"GO:0032194":null}}


id: PBO:0051263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-76-1 (pseudogene)","termid":"PBO:0051263"}


id: GO:0004131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cytosine + H2O = uracil + NH3.","definition_xrefs":["EC:3.5.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"cytosine deaminase activity","secondary_identifiers":["RHEA:20605","MetaCyc:CYTDEAM-RXN"],"synonyms":[{"name":"cytosine aminohydrolase activity","type":"related"},{"name":"isocytosine deaminase activity","type":"related"}],"termid":"GO:0004131"}


id: PBO:0042141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 3 like 1","termid":"PBO:0042141"}


id: GO:0038119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL19 to a C-C chemokine type 7 receptor (CCR7) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:15059845","GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-C motif) ligand 19 signaling pathway","termid":"GO:0038115"},{"relation_name":"is_a","term_name":"C-C chemokine receptor CCR7 signaling pathway","termid":"GO:0038118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CCL19-activated CCR7 signaling pathway","synonyms":[{"name":"CCL19-activated CCR7 signalling pathway","type":"exact"}],"termid":"GO:0038119"}


id: PBO:0076599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 21","termid":"PBO:0076599"}


id: PBO:0089795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0658 conserved fungal multispanning membrane protein","termid":"PBO:0089795"}


id: GO:0036446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an undifferentiated cell acquires the features of a myofibroblast cell.","definition_xrefs":["CL:0000186","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast differentiation","synonyms":[{"name":"myofibroblast cell differentiation","type":"exact"}],"termid":"GO:0036446"}


id: PBO:0082837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; required for large (60S) ribosomal subunit biogenesis; acts as part of a Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription and has a role in bigenesis of the large ribosomal subunit; involved in nuclear export of pre-ribosomes; required for maintenance of dsRNA virus; homolog of human CAATT-binding protein","termid":"PBO:0082837"}


id: MOD:01689
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a carboxyl-terminal residue to an alpha-carboxyl (1-carboxyl) methyl ester.","definition_xrefs":["Unimod:34#C-term","OMSSA:68","OMSSA:18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-carboxyl methylated residue","synonyms":[{"name":"C1OMeRes","type":"exact"},{"name":"Methyl","type":"related"},{"name":"ctermpepmeester","type":"exact"},{"name":"ctermpepmethyl","type":"exact"}],"termid":"MOD:01689"}


id: PBO:0066863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 163","termid":"PBO:0066863"}


id: MOD:01227
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to an L-fluorophenylalanine.","definition_xrefs":["PubMed:8069568","DeltaMass:181","Unimod:127#F","OMSSA:46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"halogenated phenylalanine","termid":"MOD:01066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated L-phenylalanine","synonyms":[{"name":"Fluoro","type":"related"},{"name":"fluorophenylalanine replacement of phenylalanine","type":"related"},{"name":"phef","type":"exact"}],"termid":"MOD:01227"}


id: GO:0042376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phylloquinone, vitamin K1, a quinone-derived compound synthesized by green plants.","definition_xrefs":["GOC:jl","PMID:27337968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phylloquinone metabolic process","termid":"GO:0042374"},{"relation_name":"is_a","term_name":"vitamin K catabolic process","termid":"GO:0042377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766","GO:0044248"],"is_obsolete":false,"name":"phylloquinone catabolic process","synonyms":[{"name":"phylloquinone breakdown","type":"exact"},{"name":"phylloquinone catabolism","type":"exact"},{"name":"phylloquinone degradation","type":"exact"},{"name":"phytomenadione catabolic process","type":"exact"},{"name":"phytomenadione catabolism","type":"exact"},{"name":"phytonadione catabolic process","type":"exact"},{"name":"phytonadione catabolism","type":"exact"},{"name":"phytylmenaquinone catabolic process","type":"exact"},{"name":"phytylmenaquinone catabolism","type":"exact"},{"name":"vitamin K1 catabolic process","type":"exact"},{"name":"vitamin K1 catabolism","type":"exact"}],"termid":"GO:0042376"}


id: PBO:0040940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 11","termid":"PBO:0040940"}


id: PBO:0090630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding vezatin family protein involved in peroxisome inheritance Inp2","termid":"PBO:0090630"}


id: GO:0036311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(acetylamino)-4-O-[2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl]-2-deoxy-beta-D-glucopyranose + H2O = 2-(acetylamino)-4-O-(2-amino-2-deoxy-beta-D-glucopyranosyl)-2-deoxy-beta-D-glucopyranose + acetate.","definition_xrefs":["EC:3.5.1.105","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"chitin disaccharide deacetylase activity","synonyms":[{"name":"chitin oligosaccharide amidohydrolase activity","type":"related"},{"name":"chitin oligosaccharide deacetylase activity","type":"related"},{"name":"chitobiose amidohydrolase activity","type":"related"}],"termid":"GO:0036311"}


id: PBO:0057646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1238","termid":"PBO:0057646"}


id: PR:000050595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A microtubule protein alp7 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Ser-50, Ser-51, Thr-100, Thr-116, and Thr-131 of the amino acid sequence represented by UniProtKB:Q9URY2. Example: UniProtKB:Q9URY2, Ser-50/Ser-51, MOD:00046|Thr-100/Thr-116/Thr-131, MOD:00047.","definition_xrefs":["PomBase:MLR","PRO:DAN","PMID:24790093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule protein alp7 (Schizosaccharomyces pombe)","termid":"PR:000050514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alp7/Phos:(S50,S51,T100,T116,T131)","pombase_gene_id":"SPAC890.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: microtubule protein alp7 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-alp7/Phos:2","type":"exact"},{"name":"UniProtKB:Q9URY2, Ser-50/Ser-51, MOD:00046|Thr-100/Thr-116/Thr-131, MOD:00047","type":"narrow"},{"name":"alp7/Phos:(S50,S51,T100,T116,T131)","type":"exact"}],"termid":"PR:000050595"}


id: PBO:0076417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9b","termid":"PBO:0076417"}


id: PBO:0082313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for the eIF2 translation initiation factor complex; regulates translational initiation; conserved residues of this ATP-Grasp protein that bind to ATP-Mg2+ in the pombe ortholog are required for complex assembly in budding yeast; interaction with eIF2 subunit Gcd11p facilitates complex assembly and activity; required for the START transition and timely progression through G2; regulated by nutrient availability; human ortholog complements the yeast mutant","termid":"PBO:0082313"}


id: PBO:0003540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I transcription factor subunit Rrn11 (predicted)","termid":"PBO:0003540"}


id: PBO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CuSE 5'-[ACT]T[ACT]NNGCTG[AGT]-3'","termid":"PBO:0000339"}


id: PBO:0048009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 7","termid":"PBO:0048009"}


id: PBO:0086471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; conserved in fungi; identified by expression profiling and mass spectrometry","termid":"PBO:0086471"}


id: PBO:0079300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha tocopherol transfer protein like","termid":"PBO:0079300"}


id: GO:0035861
data:
  {"annotated_genes":["SJAG_01486","SJAG_05232","SJAG_01677","SJAG_02079","SJAG_02708","SJAG_01708","SJAG_02460","SJAG_01648","SJAG_03906","SJAG_02771","SJAG_00640","SJAG_04791","SJAG_04142","SJAG_02294","SJAG_00399","SJAG_00250","SJAG_01533","SJAG_01076","SJAG_05239","SJAG_01849","SJAG_02200","SJAG_03941","SJAG_02575","SJAG_01205","SJAG_02098","SJAG_01429","SJAG_01832","SJAG_04816","SJAG_03898","SJAG_05372","SJAG_03454","SJAG_01410","SJAG_01573","SJAG_05012","SJAG_02616","SJAG_02990","SJAG_04183","SJAG_05295","SJAG_01680","SJAG_05196","SJAG_02545","SJAG_03615","SJAG_03923","SJAG_03026","SJAG_03855","SJAG_01419","SJAG_00757","SJAG_01644","SJAG_05373","SJAG_02828","SJAG_04190","SJAG_02072","SJAG_01605","SJAG_03780","SJAG_04239","SJAG_01698","SJAG_03680","SJAG_03722","SJAG_00727","SJAG_02521"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70681,84711,84803,85318,85444,85746,86354,86437,87010,87557,87661,88645,88788,89782,90066,92140,92303,92646,92815,93047,93256,93290,93560,95082,95177,95308,96694,96723,96757,97166,98936,99015,99071,99448,100101,100172,100269,100339,100531,103768,103859,103902,105425,106929,107322,107611,107654,107831,108624,110365,110389,111620,112358,112621,112899,113292,113386,113670,113800,114781],"is_not":false,"summary":null,"term":"GO:0035861"}]},"cv_name":"cellular_component","definition":"A region of a chromosome at which a DNA double-strand break has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.","definition_xrefs":["GOC:vw","PMID:20096808","GOC:bf","PMID:21035408","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of DNA damage","termid":"GO:0090734"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00250":null,"SJAG_00399":null,"SJAG_00640":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01429":null,"SJAG_01486":null,"SJAG_01533":null,"SJAG_01573":null,"SJAG_01605":null,"SJAG_01644":null,"SJAG_01648":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01832":null,"SJAG_01849":null,"SJAG_02072":null,"SJAG_02079":null,"SJAG_02098":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02460":null,"SJAG_02521":null,"SJAG_02545":null,"SJAG_02575":null,"SJAG_02616":null,"SJAG_02708":null,"SJAG_02771":null,"SJAG_02828":null,"SJAG_02990":null,"SJAG_03026":null,"SJAG_03454":null,"SJAG_03615":null,"SJAG_03680":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_03923":null,"SJAG_03941":null,"SJAG_04142":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04239":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_05012":null,"SJAG_05196":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05295":null,"SJAG_05372":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"site of double-strand break","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage foci","type":"related"},{"name":"DNA damage focus","type":"related"},{"name":"IRIF","type":"related"},{"name":"ionizing radiation-induced foci","type":"related"},{"name":"site of DSB","type":"exact"}],"termid":"GO:0035861","terms_by_termid":{"GO:0035861":null}}


id: GO:0009745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of sucrose.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar mediated signaling pathway","termid":"GO:0010182"},{"relation_name":"part_of","term_name":"cellular response to sucrose stimulus","termid":"GO:0071329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sucrose mediated signaling","synonyms":[{"name":"sucrose mediated signalling","type":"exact"}],"termid":"GO:0009745"}


id: PBO:0004607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon catalytic subunit B, Dpb2","termid":"PBO:0004607"}


id: PBO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L24 (predicted)","termid":"PBO:0001973"}


id: FYECO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which rapamycin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ rapamycin","synonyms":[{"name":"+ sirolimus","type":"exact"}],"termid":"FYECO:0000242"}


id: MOD:00276
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, a lysine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:9237682","RESID:AA0271","PubMed:12709052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-lysine","synonyms":[{"name":"(19S,20S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-20-([(S)-5-amino-5-carboxypentyl]amino)-3,8,13,17-tetramethyl-21H,23H-19,20-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"bis(S-cysteinyl)-N6-lysino-heme","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-lysine","type":"exact"}],"termid":"MOD:00276"}


id: GO:2000996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"positive regulation of cell wall polysaccharide catabolic process","termid":"GO:2000968"},{"relation_name":"is_a","term_name":"regulation of mannan catabolic process","termid":"GO:2000994"},{"relation_name":"positively_regulates","term_name":"mannan catabolic process","termid":"GO:0046355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of mannan catabolic process","synonyms":[{"name":"positive regulation of mannan breakdown","type":"exact"},{"name":"positive regulation of mannan catabolism","type":"exact"},{"name":"positive regulation of mannan degradation","type":"exact"}],"termid":"GO:2000996"}


id: GO:1901076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["GO:kmv","GOC:TermGenie","PMID:19402756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis, engulfment","termid":"GO:0060100"},{"relation_name":"is_a","term_name":"regulation of engulfment of apoptotic cell","termid":"GO:1901074"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic cell clearance","termid":"GO:2000427"},{"relation_name":"positively_regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of engulfment of apoptotic cell","synonyms":[{"name":"activation of engulfment of apoptotic cell","type":"narrow"},{"name":"activation of engulfment of apoptotic cell corpse","type":"narrow"},{"name":"activation of engulfment of cell corpse","type":"narrow"},{"name":"positive regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"positive regulation of engulfment of cell corpse","type":"exact"},{"name":"up regulation of engulfment of apoptotic cell","type":"exact"},{"name":"up regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"up regulation of engulfment of cell corpse","type":"exact"},{"name":"up-regulation of engulfment of apoptotic cell","type":"exact"},{"name":"up-regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"up-regulation of engulfment of cell corpse","type":"exact"},{"name":"upregulation of engulfment of apoptotic cell","type":"exact"},{"name":"upregulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"upregulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901076"}


id: SO:0001635
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 5KB 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upstream_gene_variant","termid":"SO:0001631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5KB_upstream_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"5kb upstream variant","type":"exact"},{"name":"Seattleseq:upstream-gene","type":"exact"},{"name":"upstream","type":"exact"}],"termid":"SO:0001635"}


id: PBO:0054622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2027","termid":"PBO:0054622"}


id: PBO:0039216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C7, pseudogene","termid":"PBO:0039216"}


id: RO:0002520
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is a consecutive sequence of y iff x has subsequence y, and all the parts of x are made of zero or more repetitions of y or sequences as the same type as y.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_subsequence","termid":"RO:0002524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_consecutive_sequence_of","termid":"RO:0002520"}


id: PBO:0038591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACAD9 divergent transcript","termid":"PBO:0038591"}


id: GO:0009546
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space between the plasma membrane and the desmotubule of a plasmodesma.","definition_xrefs":["PMID:29880547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"plasmodesma","termid":"GO:0009506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasmodesmatal cytoplasmic sleeve","synonyms":[{"name":"plasmodesmatal cytoplasmic annulus","type":"exact"}],"termid":"GO:0009546"}


id: GO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a macrophage expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage antigen processing and presentation","termid":"GO:0002472"}


id: GO:0002725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of T cell cytokine production","termid":"GO:0002724"},{"relation_name":"negatively_regulates","term_name":"T cell cytokine production","termid":"GO:0002369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of T cell cytokine production","synonyms":[{"name":"down regulation of T cell cytokine production","type":"exact"},{"name":"down-regulation of T cell cytokine production","type":"exact"},{"name":"downregulation of T cell cytokine production","type":"exact"},{"name":"inhibition of T cell cytokine production","type":"narrow"},{"name":"negative regulation of T lymphocyte cytokine production","type":"exact"},{"name":"negative regulation of T-cell cytokine production","type":"exact"},{"name":"negative regulation of T-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002725"}


id: PBO:0058729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6857","termid":"PBO:0058729"}


id: GO:0052738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a quinone or similar compound.","definition_xrefs":["EC:1.2.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, with a quinone or similar compound as acceptor","termid":"GO:0052738"}


id: GO:0070044
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 1a (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-1a complex","synonyms":[{"name":"SNARE complex (Snap25, Stx1a, Vamp2)","type":"narrow"},{"name":"SNARE complex (Stx1a, SNAP25, VAMP)","type":"narrow"},{"name":"Snap25-Stx1a-Vamp2 complex","type":"narrow"},{"name":"Stx1a-SNAP25-VAMP complex","type":"narrow"}],"termid":"GO:0070044"}


id: FYPO:0007999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle pole body is abolished during karyogamy.","definition_xrefs":["PomBase:mlr","PMID:25869666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to meiotic spindle pole body","termid":"FYPO:0003542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to spindle pole body during karyogamy","termid":"FYPO:0007999"}


id: PBO:0016913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 1","termid":"PBO:0016913"}


id: PBO:0047354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 7","termid":"PBO:0047354"}


id: PBO:0082483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cargo-binding mu subunit of AP-2; AP-2 is a heterotetrameric endocytic cargo-binding adaptor that facilitates uptake of membrane proteins during clathrin-mediated endocytosis; Apm4p is required for AP-2 function and localization, and binds cell wall stress receptor Mid2p; AP-2 is required for cell polarity responses to pheromone, nutritional status and cell wall damage in S. cerevisiae, and for hyphal growth in C. albicans; AP-2 complex is conserved in mammals","termid":"PBO:0082483"}


id: GO:1902153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to DNA damage checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to DNA integrity checkpoint signaling","termid":"GO:1902151"},{"relation_name":"regulates","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to DNA damage checkpoint signaling","synonyms":[{"name":"regulation of DNA damage checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in DNA damage checkpoint","type":"exact"}],"termid":"GO:1902153"}


id: PBO:0068017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 322","termid":"PBO:0068017"}


id: PR:Q10210
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc3 gene.","definition_xrefs":["UniProtKB:Q10210","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1 complex subunit swc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.02c","synonyms":[{"name":"Spom972h-swc3","type":"exact"}],"termid":"PR:Q10210"}


id: PBO:0085480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable mitochondrial seryl-tRNA synthetase; mutant displays increased invasive and pseudohyphal growth","termid":"PBO:0085480"}


id: PBO:0007356
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA trimethylguanosine capped","termid":"PBO:0007356"}


id: PBO:0056086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY86 antisense RNA 1","termid":"PBO:0056086"}


id: PBO:0046829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 2","termid":"PBO:0046829"}


id: PBO:0113081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine aminopeptidase with homocysteine-thiolactonase activity; protects cells against homocysteine toxicity; cytosolic protein, selectively transported to vacuole during nitrogen starvation; targeted to vacuole via CVT pathway; has bleomycin hydrolase activity in vitro; transcription is regulated by galactose via Gal4p; orthologous to human BLMH","termid":"PBO:0113081"}


id: PBO:0072162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 39","termid":"PBO:0072162"}


id: GO:0061591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a population of galactosylceramide molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet as a result of a calcium stimulus.","definition_xrefs":["GOC:krc","PMID:23532839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium activated phospholipid scrambling","termid":"GO:0061588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"calcium activated galactosylceramide scrambling","termid":"GO:0061591"}


id: GO:0032975
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029","SJAG_03256","SJAG_00877"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99952],"is_not":false,"summary":null,"term":"GO:0032975"},{"annotations":[98919,106133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[90725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[99953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[99955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[99956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[98921,99957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[99958,106135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[99959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[99960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"}]},"cv_name":"biological_process","definition":"The directed movement of amino acids into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00877":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"amino acid transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar amino acid import","type":"exact"}],"termid":"GO:0032975","terms_by_termid":{"GO:0032975":null,"GO:0034490":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:1901482":null,"GO:1990591":null}}


id: PATO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Structure quality that is the presence of closed epithelium bounded capsules containing one or more liquid or solid organism substances.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic","synonyms":[{"name":"cysts","type":"narrow"}],"termid":"PATO:0001673"}


id: MOD:01992
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and the alpha-carbon of another amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"}


id: PATO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility which is relative high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mobile","termid":"PATO:0000299"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased mobility","termid":"PATO:0002282"}


id: PBO:0052599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 6","termid":"PBO:0052599"}


id: GO:0046633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an alpha-beta T cell population by cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"},{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell proliferation","synonyms":[{"name":"alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"alpha-beta T-cell proliferation","type":"exact"},{"name":"alpha-beta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046633"}


id: PBO:0058952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKLN1 antisense RNA","termid":"PBO:0058952"}


id: GO:0035849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nephric duct grows along its axis. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["GOC:yaf","PMID:16216236","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"nephric duct morphogenesis","termid":"GO:0072178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct elongation","termid":"GO:0035849"}


id: GO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II (RNAP II) in order to promote assembly of the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase II proximal promoter sequence-specific DNA binding involved in preinitiation complex assembly (obsolete GO:0001074)","synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly","type":"exact"},{"name":"transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding involved in preinitiation complex assembly","type":"exact"}],"termid":"GO:0001074"}


id: PBO:0027554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_during_recovery_from_nitrogen_starvation","termid":"PBO:0027554"}


id: PBO:0030786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_aseptate_vegetative_cell","termid":"PBO:0030786"}


id: PR:Q10409
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tsr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein tsr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.04c","synonyms":[{"name":"Spom972h-tsr3","type":"exact"}],"termid":"PR:Q10409"}


id: PBO:0060286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 3","termid":"PBO:0060286"}


id: PBO:0067862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 164","termid":"PBO:0067862"}


id: PBO:0075291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX30 divergent transcript","termid":"PBO:0075291"}


id: GO:0045588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell differentiation","termid":"GO:0045586"},{"relation_name":"is_a","term_name":"positive regulation of gamma-delta T cell activation","termid":"GO:0046645"},{"relation_name":"positively_regulates","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gamma-delta T cell differentiation","synonyms":[{"name":"activation of gamma-delta T cell differentiation","type":"narrow"},{"name":"positive regulation of gamma-delta T cell development","type":"related"},{"name":"positive regulation of gamma-delta T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of gamma-delta T-cell differentiation","type":"exact"},{"name":"positive regulation of gamma-delta T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of gamma-delta T cell differentiation","type":"narrow"},{"name":"up regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"up-regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"upregulation of gamma-delta T cell differentiation","type":"exact"}],"termid":"GO:0045588"}


id: GO:0032700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:mah","GOC:add","PMID:16482511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"negatively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-17 production","secondary_identifiers":["GO:0045379","GO:1905077"],"synonyms":[{"name":"down regulation of interleukin-17 production","type":"exact"},{"name":"downregulation of interleukin-17 production","type":"exact"},{"name":"inhibition of interleukin-17 production","type":"narrow"},{"name":"negative regulation of CTLA-8 production","type":"narrow"},{"name":"negative regulation of Cytotoxic T-lymphocyte-associated antigen 8 secretion","type":"exact"},{"name":"negative regulation of IL-17 production","type":"exact"},{"name":"negative regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-17 secretion","type":"narrow"}],"termid":"GO:0032700"}


id: PBO:0077703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin C2, fast skeletal type","termid":"PBO:0077703"}


id: PBO:0084490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein; down-regulates Rad51p-mediated mitotic recombination when the meiotic recombination machinery is impaired; promotes synapsis and required for the normal morphogenesis of synaptonemal complex; prevents the recruitment of Rad54p to site-specific DNA double-strand breaks in vivo; early meiotic gene, transcribed specifically during meiotic prophase","termid":"PBO:0084490"}


id: PBO:0013753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciclin domain protein Fsc1","termid":"PBO:0013753"}


id: GO:0046184
data:
  {"annotated_genes":["SJAG_00707","SJAG_00691","SJAG_00283","SJAG_04192","SJAG_01881","SJAG_01383","SJAG_01543","SJAG_00252"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[112460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046166"},{"annotations":[95807,111794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[96988,110500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[91627,63444,83897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aldehydes, any organic compound with the formula R-CH=O.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null,"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aldehyde biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"aldehyde anabolism","type":"exact"},{"name":"aldehyde biosynthesis","type":"exact"},{"name":"aldehyde formation","type":"exact"},{"name":"aldehyde synthesis","type":"exact"}],"termid":"GO:0046184","terms_by_termid":{"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042821":null,"GO:0042823":null,"GO:0046166":null}}


id: PBO:0047098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 151 member A","termid":"PBO:0047098"}


id: PBO:0044565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAZ associated protein 2","termid":"PBO:0044565"}


id: PBO:0017617
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Marie-Tooth disease","termid":"PBO:0017617"}


id: PBO:0077711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transition protein 1","termid":"PBO:0077711"}


id: PBO:0039365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion molecule with Ig like domain 1","termid":"PBO:0039365"}


id: SO:0000533
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site (e.g. CACAGTG), part of V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_heptamer","synonyms":[{"name":"V heptamer","type":"exact"},{"name":"V-HEPTAMER","type":"exact"}],"termid":"SO:0000533"}


id: PBO:0084108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDEL receptor; an integral membrane protein that binds to the HDEL motif in proteins destined for retention in the endoplasmic reticulum; has a role in maintenance of normal levels of ER-resident proteins","termid":"PBO:0084108"}


id: PBO:0005108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm3","termid":"PBO:0005108"}


id: PATO:0000307
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000307 relative age value (obsolete PATO:0000307)","termid":"PATO:0000307"}


id: PBO:0055477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2910","termid":"PBO:0055477"}


id: PBO:0055695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIX1L antisense RNA 1","termid":"PBO:0055695"}


id: GO:1902531
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  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process that modulates the frequency, rate or extent of intracellular signal transduction.","definition_xrefs":["GOC:TermGenie","GOC:dph","GOC:tb","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"intracellular signal 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id: PBO:0062968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 11","termid":"PBO:0062968"}


id: PBO:0054653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2058","termid":"PBO:0054653"}


id: GO:0030883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an endogenous cellular lipid antigen.","definition_xrefs":["PMID:14500461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid antigen binding","termid":"GO:0030882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"endogenous lipid antigen binding","termid":"GO:0030883"}


id: PBO:0081307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 90 pseudogene 2","termid":"PBO:0081307"}


id: PBO:0038461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 1","termid":"PBO:0038461"}


id: PBO:0090283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex HEAT repeat subunit Ccq1","termid":"PBO:0090283"}


id: PR:Q9UTI3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-alpha-acetyltransferase 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01557","PANTHER:PTHR23091:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal acetyltransferase A complex catalytic subunit ard1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.08","secondary_identifiers":["UniProtKB:Q9UTI3"],"synonyms":[{"name":"NatA complex subunit ARD1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAA10","type":"exact"}],"termid":"PR:Q9UTI3"}


id: GO:0034312
data:
  {"annotated_genes":["SJAG_02706","SJAG_03098","SJAG_04178","SJAG_00880","SJAG_01057","SJAG_03275","SJAG_02305","SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88902,101642,102086,105827,93795,93036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[86454,104631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a diol, any alcohol containing two hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_03098":null,"SJAG_03275":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dihydric alcohol biosynthetic process","type":"exact"},{"name":"diol anabolism","type":"exact"},{"name":"diol biosynthesis","type":"exact"},{"name":"diol formation","type":"exact"},{"name":"diol synthesis","type":"exact"}],"termid":"GO:0034312","terms_by_termid":{"GO:0006729":null,"GO:0046512":null}}


id: PBO:0047486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 1 pseudogene 2","termid":"PBO:0047486"}


id: PR:O14277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.08","secondary_identifiers":["UniProtKB:O14277"],"synonyms":[{"name":"Spom972h-RPS5","type":"exact"}],"termid":"PR:O14277"}


id: PBO:0084883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial serine hydroxymethyltransferase; converts serine to glycine plus 5,10 methylenetetrahydrofolate; involved in generating precursors for purine, pyrimidine, amino acid, and lipid biosynthesis; reverse reaction generates serine","termid":"PBO:0084883"}


id: SO:0001313
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_N6_2prime_O_trimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_N6_2_prime_O_trimethyladenosine","secondary_identifiers":["RNAMOD:089"],"synonyms":[{"name":"N6,N6,2'-O-trimethyladenosine","type":"exact"},{"name":"m62Am","type":"exact"}],"termid":"SO:0001313"}


id: PBO:0002620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase Spe1 (predicted)","termid":"PBO:0002620"}


id: PBO:0017750
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta exists predominantly as a dimer of the heterotetramer (Pol3, Cdc1, Cdc27, and Cdm1)","termid":"PBO:0017750"}


id: PBO:0085498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein adaptor between Myo4p and the She2p-mRNA complex; part of the mRNA localization machinery that restricts accumulation of certain proteins to the bud; also required for cortical ER inheritance","termid":"PBO:0085498"}


id: PBO:0005838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase (predicted)","termid":"PBO:0005838"}


id: PBO:0071358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 17","termid":"PBO:0071358"}


id: PBO:0063613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4","termid":"PBO:0063613"}


id: PBO:0048656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein epsilon 1","termid":"PBO:0048656"}


id: GO:1900309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltoheptaose metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"maltoheptaose metabolic process","termid":"GO:2001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of maltoheptaose metabolic process","synonyms":[{"name":"regulation of maltoheptaose metabolism","type":"exact"}],"termid":"GO:1900309"}


id: GO:0047237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP.","definition_xrefs":["MetaCyc:2.4.1.174-RXN","EC:2.4.1.174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:23464"],"synonyms":[{"name":"N-acetylgalactosaminyltransferase I activity","type":"exact"},{"name":"UDP-N-acetyl-D-galactosamine:D-glucuronyl-1,3-beta-D-galactosyl-proteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"glucuronylgalactosylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine-chondroitin acetylgalactosaminyltransferase I","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-chondroitinacetylgalactosaminyltransferase I activity","type":"related"}],"termid":"GO:0047237"}


id: PBO:0079366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha like 3","termid":"PBO:0079366"}


id: PBO:0061498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding repressor of NFAT","termid":"PBO:0061498"}


id: FYPO:0003326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal interphase microtubule nucleation","synonyms":[{"name":"normal interphase cytoplasmic microtubule nucleation","type":"exact"},{"name":"normal microtubule nucleation during interphase during vegetative growth","type":"exact"},{"name":"normal microtubule nucleation during interphase of mitotic cell cycle","type":"related"},{"name":"normal microtubule nucleation during mitotic interphase","type":"exact"}],"termid":"FYPO:0003326"}


id: PBO:0110468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain 40 molecular ruler complex subunit","termid":"PBO:0110468"}


id: FYPO:0004104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and shaped in the form of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"inviable spheroid vegetative cell","termid":"FYPO:0002482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"inviable spherical vegetative cell","synonyms":[{"name":"inviable spherical cell","type":"exact"},{"name":"inviable spherical cell during vegetative growth","type":"exact"},{"name":"inviable spherical vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; spherical vegetative cell","type":"exact"},{"name":"spherical inviable cell","type":"exact"}],"termid":"FYPO:0004104"}


id: GO:0072144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular mesangial cell in the kidney over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"is_a","term_name":"mesangial cell development","termid":"GO:0072143"},{"relation_name":"part_of","term_name":"glomerular mesangial cell differentiation","termid":"GO:0072008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular mesangial cell development","termid":"GO:0072144"}


id: PBO:0046963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83A antisense RNA 2","termid":"PBO:0046963"}


id: PBO:0074587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3C","termid":"PBO:0074587"}


id: PBO:0061289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 1","termid":"PBO:0061289"}


id: GO:0106268
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3,5-dichloro-2,4,6-trihydroxyphenyl)hexan-1-one + S-adenosyl-L-methionine = 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:20231486","RHEA:48396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"3,5-dichloro-THPH methyl transferase activity","synonyms":[{"name":"DIF-1 syntase","type":"related"}],"termid":"GO:0106268"}


id: PBO:0047041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 106 member B","termid":"PBO:0047041"}


id: PBO:0091438
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA feature moved from the opposite strand","termid":"PBO:0091438"}


id: PBO:0038288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoelectric_point","termid":"PBO:0038288"}


id: GO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a receptor binding to extracellular adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled purinergic receptor signaling pathway","termid":"GO:0035588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled adenosine receptor signaling pathway","synonyms":[{"name":"P1 receptor signaling pathway","type":"exact"},{"name":"adenosine receptor signaling pathway","type":"related"},{"name":"adenosine receptor signaling pathway, G-protein coupled","type":"exact"},{"name":"adenosine receptor signalling pathway","type":"exact"}],"termid":"GO:0001973"}


id: FYPO:0007479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the assembly and stable inheritance of heterochromatic structure is normal (i.e. indistinguishable from wild type) in regions of the genome where heterochromatin is normally maintained over successive generations.","definition_xrefs":["PomBase:mah","PMID:29899117","PMID:31278118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"normal epigenetic heterochromatin inheritance","synonyms":[{"name":"normal PEV","type":"related"},{"name":"normal epigenetic heterochromatin propagation","type":"exact"},{"name":"normal epigenetic inheritance of heterochromatin","type":"exact"}],"termid":"FYPO:0007479"}


id: GO:0015151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of alpha-glucosides from one side of a membrane to the other. Alpha-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in an alpha configuration.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:jl","GOC:mtg_transport","PMID:28510148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"alpha-glucoside transmembrane transporter activity","termid":"GO:0015151"}


id: PBO:0063553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEG3 antisense RNA 1","termid":"PBO:0063553"}


id: GO:0023018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which signal transmission via a diffusible molecule is initiated by a T cell.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete T cell activation of signal transmission via diffusible molecule (obsolete GO:0023018)","synonyms":[{"name":"T cell activation of signal transmission via diffusible molecule","type":"exact"}],"termid":"GO:0023018"}


id: PBO:0046749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 4","termid":"PBO:0046749"}


id: GO:1903328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of tRNA metabolic process","termid":"GO:1903326"},{"relation_name":"positively_regulates","term_name":"tRNA metabolic process","termid":"GO:0006399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"positively_regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"positive regulation of tRNA metabolic process","synonyms":[{"name":"activation of tRNA metabolic process","type":"narrow"},{"name":"activation of tRNA metabolism","type":"narrow"},{"name":"positive regulation of tRNA metabolism","type":"exact"},{"name":"up regulation of tRNA metabolic process","type":"exact"},{"name":"up regulation of tRNA metabolism","type":"exact"},{"name":"up-regulation of tRNA metabolic process","type":"exact"},{"name":"up-regulation of tRNA metabolism","type":"exact"},{"name":"upregulation of tRNA metabolic process","type":"exact"},{"name":"upregulation of tRNA metabolism","type":"exact"}],"termid":"GO:1903328"}


id: PBO:0068835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 73, pseudogene","termid":"PBO:0068835"}


id: GO:0110087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host protease activator activity.","definition_xrefs":["PMID:23303392"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protease activator activity (obsolete GO:0110087)","termid":"GO:0110087"}


id: PBO:0015672
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae TIF34","termid":"PBO:0015672"}


id: GO:0018787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoyl-CoA + H2O = 4-hydroxybenzoyl CoA + chloride.","definition_xrefs":["EC:3.8.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"4-chlorobenzoyl-CoA dehalogenase activity","secondary_identifiers":["UM-BBD_enzymeID:e0113","RHEA:14853","MetaCyc:3.8.1.7-RXN"],"synonyms":[{"name":"4-chlorobenzoyl CoA chlorohydrolase activity","type":"related"}],"termid":"GO:0018787"}


id: GO:0061140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lung secretory cell. A lung secretory cell is a specialized epithelial cell of the lung that contains large secretory granules in its apical part.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelial cell differentiation","termid":"GO:0060487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung secretory cell differentiation","termid":"GO:0061140"}


id: PBO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 1","termid":"PBO:0000859"}


id: GO:0090546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which excess light energy absorbed by chlorophyll and not used to drive photosynthesis is re-emitted as light.","definition_xrefs":["PMID:10938857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy quenching","termid":"GO:1990066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chlorophyll fluorescence","termid":"GO:0090546"}


id: GO:0016997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-glycosidic linkages in oligo- or poly(sialic) acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"alpha-sialidase activity","termid":"GO:0016997"}


id: GO:0098548
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the Golgi membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005794","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of Golgi membrane","termid":"GO:0098548"}


id: GO:0039007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pronephric nephron are generated and organized. A pronephric nephron is the functional unit of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron morphogenesis","termid":"GO:0072028"},{"relation_name":"part_of","term_name":"pronephric nephron development","termid":"GO:0039019"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron morphogenesis","termid":"GO:0039007"}


id: GO:0051409
data:
  {"annotated_genes":["SJAG_04063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071500"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["PMID:15925705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrosative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051409","terms_by_termid":{"GO:0071500":null}}


id: GO:0000429
data:
  {"annotated_genes":["SJAG_03911","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71044,102352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"}]},"cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one carbon source leads to the modulation of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription","termid":"GO:0045990"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03473":null,"SJAG_03911":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000429","terms_by_termid":{"GO:0000433":null}}


id: PBO:0059420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 6","termid":"PBO:0059420"}


id: GO:0000957
data:
  {"annotated_genes":["SJAG_02526","SJAG_01948"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86532,110001],"is_not":false,"summary":null,"term":"GO:0000957"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of RNA transcribed from the mitochondrial genome and occurring in the mitochondrion.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01948":null,"SJAG_02526":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial RNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000957","terms_by_termid":{"GO:0000957":null}}


id: PBO:0039533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD34C antisense RNA 1","termid":"PBO:0039533"}


id: GO:0046864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of isoprenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Isoprenoids comprise a group of compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"isoprenoid transport","termid":"GO:0046864"}


id: MOD:01802
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serinium (protonated L-serine) residue to an N,N,N-trimethyl-L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-serine (L-serinium) residue","termid":"MOD:01801"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated residue","termid":"MOD:01687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-serine (from L-serinium)","synonyms":[{"name":"N2Me3Ala","type":"exact"}],"termid":"MOD:01802"}


id: PR:Q9Y7K6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- san1 gene.","definition_xrefs":["UniProtKB:Q9Y7K6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C2A9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.04c","synonyms":[{"name":"Spom972h-san1","type":"exact"}],"termid":"PR:Q9Y7K6"}


id: GO:0034869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,4-trimethyl-3-oxopentanoyl-CoA + OH- = 2,4,4-trimethyl-3-oxopentanoate + CoASH.","definition_xrefs":["UM-BBD_reactionID:r1307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"2,4,4-trimethyl-3-oxopentanoyl-CoA thioesterase activity","termid":"GO:0034869"}


id: GO:1900463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cellular response to alkalinity by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17023428","GOC:dgf","GOC:TermGenie","PMID:12509465"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to alkaline pH by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900463)","synonyms":[{"name":"negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter","type":"broad"},{"name":"negative regulation of cellular response to basic pH by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900463"}


id: PBO:0064612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 2","termid":"PBO:0064612"}


id: PBO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brix domain protein Rpf2 (predicted)","termid":"PBO:0002274"}


id: PBO:0074104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 28 member 1","termid":"PBO:0074104"}


id: GO:0047693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = AMP + H+ + diphosphate.","definition_xrefs":["RHEA:14245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0047429","GO:0016787"],"is_obsolete":false,"name":"ATP diphosphatase activity","secondary_identifiers":["EC:3.6.1.8","MetaCyc:ATP-PYROPHOSPHATASE-RXN"],"synonyms":[{"name":"ATP diphosphohydrolase","type":"broad"},{"name":"ATP diphosphohydrolase (diphosphate-forming)","type":"exact"},{"name":"ATP pyrophosphatase activity","type":"exact"},{"name":"adenosine triphosphate pyrophosphatase activity","type":"exact"}],"termid":"GO:0047693"}


id: PBO:0064154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 4 pseudogene 1","termid":"PBO:0064154"}


id: PBO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.4","termid":"PBO:0002428"}


id: PBO:0028449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination_at_silent_mating-type_cassette","termid":"PBO:0028449"}


id: PBO:0041671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase","termid":"PBO:0041671"}


id: GO:0015301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion A(out) + anion B(in) = anion A(in) + anion B(out).","definition_xrefs":["GOC:mtg_transport","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete anion:anion antiporter activity (obsolete GO:0015301)","synonyms":[{"name":"anion exchanger activity","type":"exact"},{"name":"bicarbonate:chloride antiporter","type":"narrow"}],"termid":"GO:0015301"}


id: FYPO:0003994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of succinate dehydrogenase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal succinate dehydrogenase activity","termid":"FYPO:0003994"}


id: PBO:0070945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a","termid":"PBO:0070945"}


id: PBO:0002993
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Carboxyl Methyltransferase","termid":"PBO:0002993"}


id: GO:1902680
data:
  {"annotated_genes":["SJAG_02956","SJAG_03967","SJAG_00987","SJAG_04092","SJAG_05187","SJAG_00904","SJAG_04820","SJAG_03067","SJAG_02138","SJAG_02218","SJAG_00150","SJAG_01403","SJAG_03241","SJAG_03735","SJAG_04099","SJAG_04036","SJAG_04839","SJAG_02592","SJAG_05343","SJAG_01151","SJAG_02494","SJAG_00693","SJAG_03061","SJAG_04551","SJAG_05247","SJAG_05203","SJAG_02472","SJAG_03346","SJAG_04206","SJAG_04749","SJAG_00909","SJAG_04647","SJAG_03519","SJAG_01062","SJAG_00297","SJAG_01916","SJAG_04009","SJAG_01952","SJAG_02849","SJAG_01778","SJAG_03590","SJAG_03879","SJAG_03981","SJAG_01771","SJAG_00766","SJAG_02551","SJAG_00641","SJAG_03484","SJAG_01243","SJAG_02311","SJAG_00163","SJAG_00266","SJAG_02671","SJAG_04813","SJAG_04421","SJAG_00156","SJAG_04855","SJAG_01149","SJAG_02406","SJAG_03183","SJAG_05341","SJAG_02252","SJAG_00698","SJAG_04755","SJAG_00164","SJAG_02723","SJAG_01764","SJAG_01583","SJAG_02773","SJAG_02255","SJAG_04388","SJAG_03538","SJAG_02057","SJAG_03501","SJAG_06576","SJAG_01213","SJAG_04191","SJAG_00973","SJAG_01805","SJAG_03118","SJAG_02810","SJAG_00613","SJAG_03421","SJAG_02391","SJAG_01150","SJAG_05288","SJAG_02326","SJAG_00802","SJAG_04249","SJAG_03573","SJAG_01441","SJAG_01740","SJAG_02474","SJAG_02415","SJAG_02938","SJAG_06638","SJAG_01205","SJAG_00269","SJAG_03143","SJAG_03126","SJAG_05313","SJAG_04705","SJAG_02196","SJAG_03622","SJAG_01113","SJAG_01307","SJAG_04712","SJAG_05153","SJAG_02608","SJAG_01199","SJAG_06599","SJAG_00210","SJAG_03289","SJAG_02730","SJAG_01694","SJAG_04611","SJAG_00342"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045893"},{"annotations":[107024,104984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[85617,84134,89618,102764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[85865,111291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[108072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[113092,106681,88174,103073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"},{"annotations":[114302,100554,67810,83592,108032,112385,110194,84202,93655,95620,98349,115154,89936,91663,62347,85200,61469,91937,93657,98395,105804,103688,113085,113462,115155,105430,75382,112180,87540,65586,84391,108405,106837,62598,106977,90870,68746,104566,102211,95415,96612,88869,94704,90468,101938,86248,104745,105465,67855,111112,114139,91211,110685,84332,89839,92415,98268,99283,100882,104080,105158,103160,105295,109747,112577,64522,113093,104686,83764,94554,110939,91827,96601,104915,93653,69843,93654,107025,107860,109796,90504,60613,93656,93435,98813,107990,89413,98978,113574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045944"},{"annotations":[91938,101466,99174,105146,111399,113094,102143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[102337,114998,90580,104832,102144,111400,110836,95148,105147,102469,101793,94801,104859,90469,86829,99800,91513,91994,98076,99539,83627,86519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GO:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of RNA biosynthetic process","termid":"GO:2001141"},{"relation_name":"positively_regulates","term_name":"RNA biosynthetic 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regulation of RNA biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of RNA anabolism","type":"narrow"},{"name":"activation of RNA biosynthesis","type":"narrow"},{"name":"activation of RNA biosynthetic process","type":"narrow"},{"name":"activation of RNA formation","type":"narrow"},{"name":"activation of RNA synthesis","type":"narrow"},{"name":"positive regulation of RNA anabolism","type":"exact"},{"name":"positive regulation of RNA biosynthesis","type":"exact"},{"name":"positive regulation of RNA formation","type":"exact"},{"name":"positive regulation of RNA synthesis","type":"exact"},{"name":"up regulation of RNA anabolism","type":"exact"},{"name":"up regulation of RNA biosynthesis","type":"exact"},{"name":"up regulation of RNA biosynthetic process","type":"exact"},{"name":"up regulation of RNA formation","type":"exact"},{"name":"up regulation of RNA synthesis","type":"exact"},{"name":"up-regulation of RNA anabolism","type":"exact"},{"name":"up-regulation of RNA biosynthesis","type":"exact"},{"name":"up-regulation of RNA biosynthetic process","type":"exact"},{"name":"up-regulation of RNA formation","type":"exact"},{"name":"up-regulation of RNA synthesis","type":"exact"},{"name":"upregulation of RNA anabolism","type":"exact"},{"name":"upregulation of RNA biosynthesis","type":"exact"},{"name":"upregulation of RNA biosynthetic process","type":"exact"},{"name":"upregulation of RNA formation","type":"exact"},{"name":"upregulation of RNA synthesis","type":"exact"}],"termid":"GO:1902680","terms_by_termid":{"GO:0032786":null,"GO:0032968":null,"GO:0045893":null,"GO:0045899":null,"GO:0045943":null,"GO:0045944":null,"GO:0060261":null,"GO:0060963":null,"GO:1904595":null}}


id: PBO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal cellulose binding domain protein","termid":"PBO:0001806"}


id: PBO:0046888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM9C pseudogene 1","termid":"PBO:0046888"}


id: PBO:0080501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAC antisense RNA 1 (head to head)","termid":"PBO:0080501"}


id: PBO:0044121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 7, pseudogene","termid":"PBO:0044121"}


id: PBO:0063379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDC antisense RNA 1","termid":"PBO:0063379"}


id: FYPO:0000378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which apoptosis is normal (i.e. indistinguishable from wild type). Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["PomBase:mah","GO:0006915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal apoptosis","synonyms":[{"name":"apoptosis: normal","type":"related"}],"termid":"FYPO:0000378"}


id: FYPO:0001094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a replication origin by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal double-stranded DNA binding","termid":"FYPO:0007542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA replication origin binding","synonyms":[{"name":"normal origin binding","type":"exact"}],"termid":"FYPO:0001094"}


id: GO:0032094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat.","definition_xrefs":["GOC:add","ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to food","termid":"GO:0032094"}


id: PBO:0031595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_positive_regulation_of_transcription","termid":"PBO:0031595"}


id: GO:0097343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ripoptosome, a protein complex whose formation can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.","definition_xrefs":["GOC:mtg_apoptosis","PMID:22274400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"ripoptosome assembly","termid":"GO:0097343"}


id: GO:0008982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sugar(out) = protein histidine + sugar phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0016740","GO:0003824","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","secondary_identifiers":["GO:0015455","GO:0015456","TC:4.A"],"synonyms":[{"name":"PEP--sugar phosphotransferase enzyme II activity","type":"exact"},{"name":"PEP-dependent phosphotransferase enzyme II","type":"related"},{"name":"PTS permease activity","type":"related"},{"name":"PTS transporter","type":"related"},{"name":"enzyme II of the phosphotransferase system","type":"related"},{"name":"phosphoenolpyruvate-sugar phosphotransferase enzyme II","type":"related"},{"name":"phosphohistidinoprotein-hexose phosphotransferase activity","type":"related"},{"name":"phosphoprotein factor-hexose phosophotransferase activity","type":"related"},{"name":"phosphotransfer-driven group translocator","type":"broad"},{"name":"protein-Np-phosphohistidine-sugar phosphotransferase activity","type":"exact"}],"termid":"GO:0008982"}


id: GO:1901057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trimethylenediamine.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"trimethylenediamine metabolic process","termid":"GO:1901055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimethylenediamine biosynthetic process","synonyms":[{"name":"trimethylenediamine anabolism","type":"exact"},{"name":"trimethylenediamine biosynthesis","type":"exact"},{"name":"trimethylenediamine formation","type":"exact"},{"name":"trimethylenediamine synthesis","type":"exact"}],"termid":"GO:1901057"}


id: PBO:0055491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2925","termid":"PBO:0055491"}


id: GO:0015613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose/glucose (methylgalactoside) porter activity (obsolete GO:0015613)","synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity","type":"exact"}],"termid":"GO:0015613"}


id: PBO:0067760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 60","termid":"PBO:0067760"}


id: PBO:0078599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 12, Y-linked","termid":"PBO:0078599"}


id: GO:1900873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"pentadec-1-ene metabolic process","termid":"GO:1900872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentadec-1-ene biosynthetic process","synonyms":[{"name":"pentadec-1-ene anabolism","type":"exact"},{"name":"pentadec-1-ene biosynthesis","type":"exact"},{"name":"pentadec-1-ene formation","type":"exact"},{"name":"pentadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900873"}


id: PBO:0042342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD79b molecule","termid":"PBO:0042342"}


id: GO:0090685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A macromolecular localization process in which RNA is transported to and maintained in a location within the nucleus.","definition_xrefs":["GOC:mah","PMID:26305931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"RNA localization to nucleus","synonyms":[{"name":"RNA localisation to nucleus","type":"exact"}],"termid":"GO:0090685"}


id: GO:0048201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles formed at the plasma membrane are directed to specific destinations in endosome membranes, mediated by molecules at the vesicle membrane and target membrane surfaces.","definition_xrefs":["GOC:jid","GOC:mah","PMID:10219233","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle targeting, plasma membrane to endosome","synonyms":[{"name":"plasma membrane to endosome targeting","type":"exact"}],"termid":"GO:0048201"}


id: GO:0019140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myo-inositol = ADP + 1D-myo-inositol 3-phosphate.","definition_xrefs":["EC:2.7.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol 3-kinase activity","secondary_identifiers":["MetaCyc:MYO-INOSITOL-1-KINASE-RXN","RHEA:21804"],"synonyms":[{"name":"ATP:myo-inositol 1-phosphotransferase activity","type":"related"},{"name":"inositol 1-kinase activity","type":"related"},{"name":"inositol-1-kinase (phosphorylating)","type":"related"},{"name":"myo-inositol 1-kinase activity","type":"related"},{"name":"myo-inositol 3-kinase activity","type":"exact"},{"name":"myoinositol kinase activity","type":"broad"}],"termid":"GO:0019140"}


id: PBO:0091162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ReqQ-type subtelomeric helicase fragment","termid":"PBO:0091162"}


id: GO:0043032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stimulates, induces or increases the rate of macrophage activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of macrophage activation","termid":"GO:0043030"},{"relation_name":"positively_regulates","term_name":"macrophage activation","termid":"GO:0042116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage activation","synonyms":[{"name":"activation of macrophage activation","type":"narrow"},{"name":"positive regulation of macrophage polarization","type":"exact"},{"name":"stimulation of macrophage activation","type":"narrow"},{"name":"up regulation of macrophage activation","type":"exact"},{"name":"up-regulation of macrophage activation","type":"exact"},{"name":"upregulation of macrophage activation","type":"exact"}],"termid":"GO:0043032"}


id: PBO:0040807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BicC family RNA binding protein 1","termid":"PBO:0040807"}


id: PBO:0027283
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0027283"}


id: PR:Q9UT76
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor eIF-2B subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10233:SF9","PRO:DNx","OMA:SCHPO00681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.14c","secondary_identifiers":["UniProtKB:Q9UT76"],"synonyms":[{"name":"Spom972h-EIF2B2","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT76"}


id: GO:0030987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a high molecular weight kininogen receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"high molecular weight kininogen receptor binding","termid":"GO:0030987"}


id: GO:0140946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl4-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl4-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 4 of histone H3, producing histone H3K4me2.","definition_xrefs":["RHEA:64448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K4 methyltransferase activity","termid":"GO:0042800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0008276","GO:0003824","GO:0016741","GO:0140096"],"is_obsolete":false,"name":"histone H3K4 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.370"],"synonyms":[{"name":"histone H3-K4 dimethylation","type":"broad"},{"name":"histone H3K4 dimethylase activity","type":"exact"},{"name":"histone H3K4 dimethylation","type":"broad"},{"name":"histone lysine N-dimethyltransferase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:0140946"}


id: GO:0052475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the cell mediated immune response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont cell-mediated immune response (obsolete GO:0052475)","synonyms":[{"name":"negative regulation by organism of symbiont cell-based immune response","type":"exact"},{"name":"negative regulation by organism of symbiont cell-mediated immune response","type":"exact"}],"termid":"GO:0052475"}


id: PBO:0043596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL25A1 divergent transcript","termid":"PBO:0043596"}


id: PATO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000087 disease sensitivity (obsolete PATO:0000087)","termid":"PATO:0000087"}


id: PBO:0011525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis","termid":"PBO:0011525"}


id: PR:Q10225
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ankyrin repeat and BTB/POZ domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.04c","secondary_identifiers":["UniProtKB:Q10225"],"synonyms":[{"name":"Spom972h-ABTB1","type":"exact"}],"termid":"PR:Q10225"}


id: _global:involved_in_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"involved_in_or_involved_in_regulation_of","termid":"_global:involved_in_or_involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_regulation_of","secondary_identifiers":["RO:0002428"],"termid":"_global:involved_in_regulation_of"}


id: PBO:0029610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_tapered_vegetative_cell","termid":"PBO:0029610"}


id: GO:0160042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of purine nucleotides across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["PMID:27477609","PMID:18375752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transmembrane transporter activity","termid":"GO:0015216"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"purine nucleotide uniporter activity","termid":"GO:0160042"}


id: GO:0052245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near a second organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis on or near other organism involved in symbiotic interaction (obsolete GO:0052245)","synonyms":[{"name":"negative energy taxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052245"}


id: GO:0021764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the amygdala over time from its initial formation until its mature state. The amygdala is an almond-shaped set of neurons in the medial temporal lobe of the brain that play a key role in processing emotions such as fear and pleasure.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","ISBN:0878937420","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amygdala development","termid":"GO:0021764"}


id: GO:0009170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate metabolic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009170"}


id: PBO:0087790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; catalyzes sumoylation of Yku70p/80p and Sir4p promoting telomere anchoring to the nuclear envelope and regulating telomerase activity; DNA-bound form catalyzes a DNA-damaged triggered sumoylation wave resulting in multisite modification of several DNA repair proteins, enhancing interactions between these proteins and accelerating repair; sumoylates Cse4p, a prerequisite for STUbL-mediated Ub-dependent degradation; role in telomere length maintenance","termid":"PBO:0087790"}


id: PBO:0090409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase Tpt1/ CIA machinery involved in ribosome biogenesis protein Yae1 fusion protein","termid":"PBO:0090409"}


id: GO:0031299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + taurine = L-alanine + sulfoacetaldehyde.","definition_xrefs":["RHEA:10420","PMID:11082195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"taurine-pyruvate aminotransferase activity","secondary_identifiers":["MetaCyc:TAURINE-AMINOTRANSFERASE-RXN","EC:2.6.1.77","KEGG_REACTION:R05652"],"synonyms":[{"name":"Tpa","type":"related"},{"name":"taurine:pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0031299"}


id: PBO:0029838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton","termid":"PBO:0029838"}


id: MOD:00562
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:12766232","Unimod:212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d5","synonyms":[{"name":"N-ethyl iodoacetamide-d5","type":"related"},{"name":"NEIAA:2H(5)","type":"related"}],"termid":"MOD:00562"}


id: PBO:0069278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 534, pseudogene","termid":"PBO:0069278"}


id: GO:0004810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a tRNA precursor + ATP + 2 CTP = a tRNA with a 3' CCA end + 3 diphosphate.","definition_xrefs":["PMID:2247609","RHEA:14433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016779","GO:0140098","GO:0140101","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"CCA tRNA nucleotidyltransferase activity","secondary_identifiers":["GO:0016437","MetaCyc:TRNA-CYTIDYLYLTRANSFERASE-RXN","EC:2.7.7.72"],"synonyms":[{"name":"ATP(CTP)-tRNA nucleotidyltransferase","type":"broad"},{"name":"ATP(CTP):tRNA nucleotidyltransferase activity","type":"broad"},{"name":"CCA-adding enzyme activity","type":"related"},{"name":"CTP(ATP):tRNA nucleotidyltransferase","type":"broad"},{"name":"CTP:tRNA cytidylyltransferase activity","type":"broad"},{"name":"ribonucleic cytidylic cytidylic adenylic pyrophosphorylase","type":"broad"},{"name":"ribonucleic cytidylyltransferase","type":"broad"},{"name":"tRNA CCA-diphosphorylase activity","type":"related"},{"name":"tRNA adenylyl(cytidylyl)transferase","type":"broad"},{"name":"tRNA cytidylyltransferase activity","type":"related"},{"name":"tRNA-nucleotidyltransferase activity","type":"broad"},{"name":"transfer RNA adenylyltransferase","type":"broad"},{"name":"transfer ribonucleate adenyltransferase activity","type":"related"},{"name":"transfer ribonucleate adenylyltransferase","type":"broad"},{"name":"transfer ribonucleate nucleotidyltransferase","type":"broad"},{"name":"transfer ribonucleic acid nucleotidyl transferase","type":"broad"},{"name":"transfer ribonucleic adenylyl (cytidylyl) transferase","type":"broad"},{"name":"transfer ribonucleic-terminal trinucleotide nucleotidyltransferase","type":"broad"},{"name":"transfer-RNA nucleotidyltransferase","type":"broad"}],"termid":"GO:0004810"}


id: PBO:0000541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor Alp41","termid":"PBO:0000541"}


id: PBO:0003413
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.2.1.6","termid":"PBO:0003413"}


id: PBO:0058994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein MLX","termid":"PBO:0058994"}


id: FYPO:0003835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which horsetail movement is normal (i.e. indistinguishable from wild type). Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["GO:0030989","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"},{"relation_name":"is_a","term_name":"normal nucleus positioning","termid":"FYPO:0001389"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal horsetail movement","synonyms":[{"name":"normal dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"normal horsetail nuclear movement","type":"exact"}],"termid":"FYPO:0003835"}


id: GO:1990432
data:
  {"annotated_genes":["SJAG_01836","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103894,114169],"is_not":false,"summary":null,"term":"GO:1990432"}]},"cv_name":"biological_process","definition":"The process of forming the mature 3' end of a siRNA molecule.","definition_xrefs":["PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA 3'-end processing","termid":"GO:0043628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01836":null,"SJAG_02621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"siRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"siRNA 3' end processing","type":"exact"},{"name":"small interfering RNA 3'-end processing","type":"exact"}],"termid":"GO:1990432","terms_by_termid":{"GO:1990432":null}}


id: PBO:0011071
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in eukaryotes only","termid":"PBO:0011071"}


id: PBO:0111421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo5","termid":"PBO:0111421"}


id: PBO:0084734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial integral inner membrane protein; involved in membrane insertion of C-terminus of Cox2p, interacts genetically and physically with Cox18p; deletion mutant sensitive to the anti-Pneumocystis carinii drug pentamidine","termid":"PBO:0084734"}


id: PBO:0064505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit F","termid":"PBO:0064505"}


id: GO:0005038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete death receptor interacting protein activity (obsolete GO:0005038)","synonyms":[{"name":"death receptor interacting protein activity","type":"exact"}],"termid":"GO:0005038"}


id: PBO:0047799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box I2","termid":"PBO:0047799"}


id: PBO:0054615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2020","termid":"PBO:0054615"}


id: PBO:0004053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cysteine desulfurase Nfs1 (predicted)","termid":"PBO:0004053"}


id: GO:0061057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of peptidoglycan to a receptor and ending with regulation of a downstream cellular process. The main outcome of the Imd signaling is the production of antimicrobial peptides.","definition_xrefs":["GOC:dph","PMID:18688280","PMID:24706930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"},{"relation_name":"part_of","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"Imd signaling pathway","type":"exact"},{"name":"Imd signalling pathway","type":"exact"},{"name":"PGRP signaling pathway","type":"related"},{"name":"immune deficiency pathway","type":"related"},{"name":"immune deficiency signaling pathway","type":"related"}],"termid":"GO:0061057"}


id: PBO:0046154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 2","termid":"PBO:0046154"}


id: GO:0075155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont transmembrane receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transmembrane receptor-mediated signal transduction in response to host (obsolete GO:0075155)","synonyms":[{"name":"negative regulation of symbiont transmembrane receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075155"}


id: MOD:00852
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with one (18)O.","definition_xrefs":["Unimod:366","PubMed:8382902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O labeled deamidated residue","termid":"MOD:00851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}


id: PBO:0027463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_intragenic_meiotic_recombination","termid":"PBO:0027463"}


id: GO:0004000
data:
  {"annotated_genes":["SJAG_04189","SJAG_04380","SJAG_00352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100356,97230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[100070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine + H2O = inosine + NH3.","definition_xrefs":["EC:3.5.4.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"adenosine deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ADENODEAMIN-RXN","Reactome:R-HSA-5693346","RHEA:24408"],"synonyms":[{"name":"adenosine aminohydrolase activity","type":"related"},{"name":"adenosine deaminase reaction","type":"exact"}],"termid":"GO:0004000","terms_by_termid":{"GO:0043829":null,"GO:0052717":null}}


id: GO:0000114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are transcribed as part of the G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in G1 phase of mitotic cell cycle (obsolete GO:0000114)","synonyms":[{"name":"G1-specific transcription in mitotic cell cycle","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter during G1 phase of cell cycle","type":"exact"},{"name":"regulation of transcription involved in G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000114"}


id: PBO:0004838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med7","termid":"PBO:0004838"}


id: PR:Q9USU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor IIA subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02933","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIA large subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.09","secondary_identifiers":["UniProtKB:Q9USU9"],"synonyms":[{"name":"Spom972h-GTF2A1","type":"exact"},{"name":"TFIIA large subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USU9"}


id: PATO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A grooved texture quality inhering in a bearer by virtue of the bearer's being marked by one or more creases in a normally smooth surface.","direct_ancestors":[{"relation_name":"is_a","term_name":"grooved","termid":"PATO:0002255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wrinkled","termid":"PATO:0001810"}


id: PBO:0058710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6838","termid":"PBO:0058710"}


id: PATO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000089 relative disease sensitivity (obsolete PATO:0000089)","termid":"PATO:0000089"}


id: GO:1990548
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103672],"is_not":false,"summary":null,"term":"GO:1990548"}]},"cv_name":"biological_process","definition":"The process in which FAD is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:14555654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD transmembrane transport","termid":"GO:0035350"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrial FAD transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990548","terms_by_termid":{"GO:1990548":null}}


id: PBO:0034780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex PHD finger and jmjC subunit Lid2","termid":"PBO:0034780"}


id: GO:0055054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose + H+ = fructose + H+.","definition_xrefs":["GOC:ct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"fructose:proton symporter activity","synonyms":[{"name":"fructose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0055054"}


id: PBO:0045140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 9","termid":"PBO:0045140"}


id: PR:Q874R3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11932:SF5","OMA:SCHPO03086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.04","secondary_identifiers":["UniProtKB:Q874R3"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ANAPC2","type":"exact"}],"termid":"PR:Q874R3"}


id: PATO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is less than 90 degrees.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute angle to","termid":"PATO:0001051"}


id: PR:Q9UT27
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pvg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvyl transferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.10c","synonyms":[{"name":"PvGal synthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pvg1","type":"exact"},{"name":"pyruvylated Gal-beta-1,3-epitope synthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT27"}


id: GO:0009561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo sac over time, from its formation as the megaspore to the mature structure. The process begins when three of the four haploid megaspores disintegrate, and the fourth undergoes mitosis giving rise to a binucleate syncytial embryo sac. The two haploid nuclei migrate to the opposite poles of the embryo sac and then undergo two rounds of mitosis generating four haploid nuclei at each pole. One nucleus from each set of four migrates to the center of the cell. Cellularization occurs, resulting in an eight-nucleate seven-celled structure. This structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center.","definition_xrefs":["GOC:jl","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"embryo sac development","termid":"GO:0009553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"megagametogenesis","secondary_identifiers":["Wikipedia:Megagametogenesis"],"synonyms":[{"name":"embryo sac development from the megaspore","type":"exact"},{"name":"megagametophyte nucleus division","type":"exact"}],"termid":"GO:0009561"}


id: GO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["PMID:12044938","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to oxidative stress (obsolete GO:0001306)","termid":"GO:0001306"}


id: FYECO:0000015
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115378,115379,115372,115375],"is_not":false,"summary":null,"term":"FYECO:0000015"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium promoting mating and sporulation.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"sporulation medium","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"synonyms":[{"name":"SPA medium","type":"narrow"},{"name":"malt extract medium","type":"narrow"},{"name":"mating medium","type":"related"}],"termid":"FYECO:0000015","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000015":null}}


id: PBO:0050045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, G","termid":"PBO:0050045"}


id: PBO:0059911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 34","termid":"PBO:0059911"}


id: GO:0050175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + H2O + NAD+ = phenylpyruvate + NH3 + NADH.","definition_xrefs":["EC:1.4.1.20","MetaCyc:PHENYLALANINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylalanine dehydrogenase activity","secondary_identifiers":["RHEA:21408"],"synonyms":[{"name":"L-phenylalanine dehydrogenase activity","type":"related"},{"name":"L-phenylalanine:NAD+ oxidoreductase (deaminating)","type":"related"},{"name":"PHD","type":"related"},{"name":"PheDH activity","type":"related"}],"termid":"GO:0050175"}


id: PBO:0045286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 37","termid":"PBO:0045286"}


id: MOD:01680
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one residue alpha amino or imino hydrogen with one methyl group.","definition_xrefs":["OMSSA:11","OMSSA:76","Unimod:34#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino monomethylated residue","synonyms":[{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N2Me1Res","type":"exact"},{"name":"ntermmethyl","type":"exact"},{"name":"ntermpepmethyl","type":"exact"}],"termid":"MOD:01680"}


id: MOD:00052
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-acetyl-L-cysteine.","definition_xrefs":["PubMed:15350136","PubMed:11857757","PubMed:6725286","RESID:AA0043","PubMed:11999733","PubMed:12175151","PubMed:14730666","PubMed:1500421","ChEBI:28939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated L-cysteine","termid":"MOD:00646"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-cysteine","synonyms":[{"name":"(2R)-2-acetamido-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-acetylamino-3-mercaptopropanoic acid","type":"exact"},{"name":"2-acetylamino-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-sulfanylpropanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetylcysteine","type":"exact"},{"name":"N-acetyl-L-cysteine","type":"exact"},{"name":"N-acetylated cysteine","type":"exact"},{"name":"N-acetylcysteine","type":"exact"},{"name":"NAcCys","type":"exact"}],"termid":"MOD:00052"}


id: GO:0009075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving amino acids of the histidine family.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine family amino acid metabolic process (obsolete GO:0009075)","synonyms":[{"name":"histidine family amino acid metabolic process","type":"exact"},{"name":"histidine family amino acid metabolism","type":"exact"}],"termid":"GO:0009075"}


id: GO:0008166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete viral replication (obsolete GO:0008166)","synonyms":[{"name":"viral replication","type":"exact"}],"termid":"GO:0008166"}


id: PR:Q10494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26F1.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C26F1.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.07","synonyms":[{"name":"Spom972h-SPAC26F1.07","type":"exact"}],"termid":"PR:Q10494"}


id: GO:1901771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of daunorubicin.","definition_xrefs":["UniPathway:UPA00054","GOC:yaf","PMID:7601857","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"daunorubicin metabolic process","termid":"GO:0044597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"daunorubicin biosynthetic process","synonyms":[{"name":"daunorubicin anabolism","type":"exact"},{"name":"daunorubicin biosynthesis","type":"exact"},{"name":"daunorubicin formation","type":"exact"},{"name":"daunorubicin synthesis","type":"exact"}],"termid":"GO:1901771"}


id: GO:0150143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CD80 biosynthetic process.","definition_xrefs":["GOC:aruk","PMID:26936882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"CD80 biosynthetic process","termid":"GO:0035780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD80 production","synonyms":[{"name":"regulation of CD80 biosynthetic process","type":"exact"}],"termid":"GO:0150143"}


id: GO:0042763
data:
  {"annotated_genes":["SJAG_02736","SJAG_03079","SJAG_01855","SJAG_03721","SJAG_01697","SJAG_03746","SJAG_02076","SJAG_03013","SJAG_04275","SJAG_00974","SJAG_04922","SJAG_00826","SJAG_00405","SJAG_04470","SJAG_02368","SJAG_03587","SJAG_04184","SJAG_03250","SJAG_03688","SJAG_03536","SJAG_03915","SJAG_01084","SJAG_00821","SJAG_03483","SJAG_03145","SJAG_04781","SJAG_02169","SJAG_01469","SJAG_04948","SJAG_00971","SJAG_03638","SJAG_04080","SJAG_01825","SJAG_01867","SJAG_01769","SJAG_00430","SJAG_04483","SJAG_04001","SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87891,110567,111433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042764"},{"annotations":[87982,109147],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905754"},{"annotations":[114603,105410,101069,97597,94947,113026,101384,100288,87627,113595,89685,93679,87419,97825,110188,89989,91498,96962,112351,105175,115080,86868,89004,90592,92759,99423,84384,99375,103491],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005628"},{"annotations":[94948,99035,114604],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070056"},{"annotations":[101385,114605,99036],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070057"},{"annotations":[102111,90632,96231,112074],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"A cell or part of the cell that constitutes an early developmental stage of a spore, a small reproductive body that is highly resistant to desiccation and heat and is capable of growing into a new organism, produced especially by certain bacteria, fungi, algae, and nonflowering plants.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00430":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01084":null,"SJAG_01469":null,"SJAG_01697":null,"SJAG_01769":null,"SJAG_01825":null,"SJAG_01855":null,"SJAG_01867":null,"SJAG_02076":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03079":null,"SJAG_03145":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03587":null,"SJAG_03638":null,"SJAG_03688":null,"SJAG_03721":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04080":null,"SJAG_04184":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_04948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intracellular immature spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore","type":"related"}],"termid":"GO:0042763","terms_by_termid":{"GO:0005628":null,"GO:0032169":null,"GO:0042764":null,"GO:0070056":null,"GO:0070057":null,"GO:1905754":null}}


id: PBO:0056699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEIS1 antisense RNA 2","termid":"PBO:0056699"}


id: GO:0071869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catecholamine stimulus. A catecholamine is any of a group of biogenic amines that includes 4-(2-aminoethyl)pyrocatechol [4-(2-aminoethyl)benzene-1,2-diol] and derivatives formed by substitution.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to monoamine","termid":"GO:0071867"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to catecholamine","synonyms":[{"name":"response to catecholamine stimulus","type":"exact"}],"termid":"GO:0071869"}


id: PBO:0090988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp36","termid":"PBO:0090988"}


id: PBO:0002505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide methionine sulfoxide reductase (predicted)","termid":"PBO:0002505"}


id: GO:0070544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from lysine at position 36 of the histone.","definition_xrefs":["GOC:sart","PMID:19061644"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K36 demethylation (obsolete GO:0070544)","synonyms":[{"name":"H3K36 demethylation","type":"related"}],"termid":"GO:0070544"}


id: FYPO:0003569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of a spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the cytoplasm. An open fenestra remains present in the nuclear envelope.","definition_xrefs":["PomBase:mah","PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in cytoplasm","synonyms":[{"name":"SPB unanchored to nuclear envelope","type":"related"},{"name":"abnormal establishment of mitotic spindle pole body localization to nuclear envelope, with spindle pole body in cytoplasm","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope, with spindle pole body in cytoplasm","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in cytoplasm, during vegetative growth","type":"exact"},{"name":"spindle pole body in cytoplasm, unanchored to nuclear envelope","type":"related"},{"name":"spindle pole body unanchored to nuclear envelope","type":"related"},{"name":"unanchored spindle pole bodies","type":"related"}],"termid":"FYPO:0003569"}


id: GO:2001026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell migration","termid":"GO:0010594"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"endothelial cell chemotaxis","termid":"GO:0035767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell chemotaxis","termid":"GO:2001026"}


id: PBO:0064747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 83","termid":"PBO:0064747"}


id: PBO:0003788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain","termid":"PBO:0003788"}


id: PBO:0003313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL family protein (predicted)","termid":"PBO:0003313"}


id: FYPO:0006700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of CDP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular CDP level","synonyms":[{"name":"decreased cellular CDP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular CDP level during vegetative growth","type":"exact"},{"name":"reduced cellular CDP level","type":"exact"}],"termid":"FYPO:0006700"}


id: PBO:0064316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 5","termid":"PBO:0064316"}


id: PBO:0072154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 31","termid":"PBO:0072154"}


id: GO:0044482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism which causes damage to the extracellular matrix of the blood vessels of the bitten organism, ultimately resulting in hemorrhage in the bitten organism.","definition_xrefs":["PMID:10441379","PMID:19485419","GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in hemorrhagic damage in another organism","termid":"GO:0044358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in blood vessel extracellular matrix damage, causing hemorrhagic damage in another organism","synonyms":[{"name":"envenomation resulting in blood vessel ECM, causing hemorrhagic damage in other organism","type":"exact"},{"name":"envenomation resulting in blood vessel extracellular matrix damage, causing hemorrhagic damage in other organism","type":"exact"}],"termid":"GO:0044482"}


id: GO:0051438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin transferase activity.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin-protein transferase activity","synonyms":[{"name":"APC regulator","type":"narrow"},{"name":"SCF complex regulator","type":"narrow"},{"name":"anaphase-promoting complex regulator","type":"narrow"},{"name":"regulation of ubiquitin transferase activity","type":"exact"},{"name":"ubiquitin transferase regulator","type":"related"},{"name":"ubiquitin-protein transferase regulator","type":"related"}],"termid":"GO:0051438"}


id: GO:0070073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which voltage-gated calcium channels become localized together in high densities.","definition_xrefs":["GOC:sart","PMID:18385325","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ion channel clustering","termid":"GO:0045161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"clustering of voltage-gated calcium channels","synonyms":[{"name":"clustering of voltage gated calcium channels","type":"exact"},{"name":"clustering of voltage-dependent calcium channels","type":"exact"},{"name":"voltage-gated calcium channel clustering","type":"exact"}],"termid":"GO:0070073"}


id: PBO:0079769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 pseudogene 2","termid":"PBO:0079769"}


id: PBO:0067026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 39, pseudogene","termid":"PBO:0067026"}


id: PBO:0066819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 118","termid":"PBO:0066819"}


id: GO:0090299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"neural crest formation","termid":"GO:0014029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neural crest formation","termid":"GO:0090299"}


id: GO:0034813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-7,8-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:1137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"benzo(a)pyrene 7,8-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r1137","EC:1.13.11.-"],"termid":"GO:0034813"}


id: GO:1990874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of vascular smooth muscle cells, resulting in the expansion of a cell population. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["PMID:23246467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell proliferation","synonyms":[{"name":"VSMC proliferation","type":"exact"},{"name":"vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1990874"}


id: GO:0044674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexameric complex consisting of three polypeptides in an alpha2beta2gamma2 arrangement. Involved in the reduction of the coenzyme M-bound methyl group to methane, which is the final step in methanogenesis.","definition_xrefs":["GOC:mengo_curators","PMID:9367957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methyl coenzyme M reductase complex","termid":"GO:0044674"}


id: GO:0043233
data:
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id: PBO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 9","termid":"PBO:0046848"}


id: PBO:0113145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein of the rho subfamily of Ras-like small GTPases; involved in establishment of cell polarity; regulates protein kinase C (Pkc1p); positive regulatory subunit of the 1,3-beta-D-glucan synthase complex, activating 1,3-beta-glucan synthase (Fks1p and Gsc2p), an enzyme involved in cell wall biosynthesis","termid":"PBO:0113145"}


id: GO:0051727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a cell switches cell cycle mode from meiotic to mitotic division.","definition_xrefs":["GOC:ai","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle switching, meiotic to mitotic cell cycle (obsolete GO:0051727)","synonyms":[{"name":"cell cycle switching, meiosis to mitosis","type":"narrow"},{"name":"cell cycle switching, meiotic to mitotic cell cycle","type":"exact"},{"name":"conversion to mitosis","type":"narrow"},{"name":"conversion to mitotic cell cycle","type":"exact"},{"name":"entry into mitosis","type":"narrow"},{"name":"entry into mitotic cell cycle","type":"exact"},{"name":"initiation of mitosis","type":"narrow"},{"name":"initiation of mitotic cell cycle","type":"exact"},{"name":"mitotic entry","type":"narrow"}],"termid":"GO:0051727"}


id: PBO:0072214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 13","termid":"PBO:0072214"}


id: GO:0180015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nucleoside from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:30658162","PMID:21998139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"nucleoside transmembrane transport","termid":"GO:1901642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nucleoside import across plasma membrane","termid":"GO:0180015"}


id: PR:Q9USH1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13186:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.03c","secondary_identifiers":["UniProtKB:Q9USH1"],"synonyms":[{"name":"SPCP31B10.03c","type":"related"},{"name":"Spom972h-MED31","type":"exact"},{"name":"cell separation protein sep10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator complex subunit 31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sep10","type":"related"},{"name":"soh1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USH1"}


id: GO:0090634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a microglial cell.","definition_xrefs":["PMID:19100238","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell mediated cytotoxicity","termid":"GO:0090634"}


id: GO:0070713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an guanosine-cytidine dinucleotide.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA guanosine-cytidine insertion","synonyms":[{"name":"RNA GC insertion","type":"exact"}],"termid":"GO:0070713"}


id: FYPO:0000575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gene silencing does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene silencing","termid":"FYPO:0000574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished gene silencing","synonyms":[{"name":"abolished gene silencing during mitotic cell cycle","type":"related"},{"name":"absent silencing","type":"exact"},{"name":"gene silencing abolished","type":"exact"},{"name":"gene silencing abolished during vegetative growth","type":"exact"},{"name":"silencing: absent","type":"related"}],"termid":"FYPO:0000575"}


id: GO:0033384
data:
  {"annotated_genes":["SJAG_03352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95714],"is_not":false,"summary":null,"term":"GO:0033384"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of geranyl diphosphate.","definition_xrefs":["MetaCyc:PWY-5122","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"geranyl diphosphate metabolic process","termid":"GO:0033383"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"geranyl diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"geranyl diphosphate anabolism","type":"exact"},{"name":"geranyl diphosphate biosynthesis","type":"exact"},{"name":"geranyl diphosphate formation","type":"exact"},{"name":"geranyl diphosphate synthesis","type":"exact"},{"name":"geranyldiphosphate biosynthetic process","type":"exact"}],"termid":"GO:0033384","terms_by_termid":{"GO:0033384":null}}


id: PBO:0086614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086614"}


id: PBO:0014235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated NEDD8-dissociated protein Knd1 (predicted)","termid":"PBO:0014235"}


id: GO:0060813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a mRNA is transported to, and maintained in the anterior portion of the oocyte and/or syncytial embryo contributing to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"anterior mRNA localization involved in anterior/posterior axis specification","synonyms":[{"name":"anterior mRNA localisation involved in anterior/posterior axis specification","type":"exact"}],"termid":"GO:0060813"}


id: GO:0051644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a plastid is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"plastid localization","synonyms":[{"name":"establishment and maintenance of plastid localization","type":"exact"},{"name":"plastid localisation","type":"exact"}],"termid":"GO:0051644"}


id: PBO:0002985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous Pmf1 factor 1, implicated in isoleucine biosynthesis (predicted)","termid":"PBO:0002985"}


id: PBO:0081074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 6","termid":"PBO:0081074"}


id: PBO:0079178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 7, pseudogene","termid":"PBO:0079178"}


id: FYPO:0004001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione (GSH) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular sulfur level","termid":"FYPO:0001544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular glutathione level","synonyms":[{"name":"normal cellular GSH level","type":"exact"},{"name":"normal cellular L-gamma-glutamyl-L-cysteinylglycine level","type":"exact"},{"name":"normal cellular glutathione level during mitotic cell cycle","type":"related"},{"name":"normal cellular glutathione level during vegetative growth","type":"exact"},{"name":"normal cellular reduced glutathione level","type":"exact"},{"name":"normal glutathione accumulation","type":"related"}],"termid":"FYPO:0004001"}


id: SO:0000882
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing the alteration of codon meaning.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded","termid":"SO:0000881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon_redefined","synonyms":[{"name":"codon redefined","type":"exact"}],"termid":"SO:0000882"}


id: PBO:0068515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 107, pseudogene","termid":"PBO:0068515"}


id: PBO:0052708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18","termid":"PBO:0052708"}


id: PATO:0000196
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000196 vocalization (obsolete PATO:0000196)","termid":"PATO:0000196"}


id: PBO:0044737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 5","termid":"PBO:0044737"}


id: GO:0031760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-7 lysophosphatidic acid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"Edg-7 lysophosphatidic acid receptor binding","synonyms":[{"name":"Edg-7 lysophosphatidic acid receptor ligand","type":"narrow"},{"name":"LPA3 receptor binding","type":"exact"}],"termid":"GO:0031760"}


id: GO:0014004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a microglial cell. Microglia are glial cells that act as the immune cells of the central nervous system. They form part of the supporting structure of this system.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"is_a","term_name":"macrophage differentiation","termid":"GO:0030225"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglia differentiation","synonyms":[{"name":"microglial cell differentiation","type":"exact"}],"termid":"GO:0014004"}


id: PBO:0046280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastin microfibril interfacer 2","termid":"PBO:0046280"}


id: PBO:0031883
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae RBL2","termid":"PBO:0031883"}


id: PBO:0074733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 91","termid":"PBO:0074733"}


id: GO:0052864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1-deoxy-D-xylulose 5-phosphate, the 5-phospho derivative of 1-deoxy-D-xylulose. 1-deoxy-D-xylulose 5-phosphate is an intermediate in the non-mevalonate pathway and a common precursor for isoprenoid, thiamin, and pyridoxol biosynthesis.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"1-deoxy-D-xylulose 5-phosphate metabolic process","termid":"GO:0052863"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-deoxy-D-xylulose 5-phosphate catabolic process","synonyms":[{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate breakdown","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate catabolic process","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate catabolism","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate degradation","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate breakdown","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate catabolism","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate degradation","type":"exact"}],"termid":"GO:0052864"}


id: PBO:0075933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of tumorigenicity 20","termid":"PBO:0075933"}


id: GO:0016122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"xanthophyll metabolic process","synonyms":[{"name":"xanthophyll metabolism","type":"exact"}],"termid":"GO:0016122"}


id: GO:0060273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior in which an organism sheds tears, often accompanied by non-verbal vocalizations and in response to external or internal stimuli.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"crying behavior","termid":"GO:0060273"}


id: GO:0010548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thylakoid membrane disassembly.","definition_xrefs":["PMID:17416733","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane disassembly","termid":"GO:0010549"},{"relation_name":"regulates","term_name":"thylakoid membrane disassembly","termid":"GO:0010547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of thylakoid membrane disassembly","synonyms":[{"name":"regulation of thylakoid membrane degradation","type":"exact"}],"termid":"GO:0010548"}


id: PBO:0068344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 115","termid":"PBO:0068344"}


id: FYPO:0005759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at late-firing replication origins is increased.","definition_xrefs":["PomBase:mah","PMID:22987637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at replication origin","termid":"FYPO:0004961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at late replication origin","synonyms":[{"name":"increased protein localisation to chromatin at late replication origin","type":"exact"},{"name":"increased protein localization to chromatin at late origin","type":"exact"},{"name":"increased protein localization to chromatin at late replication origins during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at late replication origins during vegetative growth","type":"exact"}],"termid":"FYPO:0005759"}


id: PR:O94331
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An orotate phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02777","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotate phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.15","secondary_identifiers":["UniProtKB:O94331"],"synonyms":[{"name":"OPRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OPRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pyrE","type":"exact"}],"termid":"PR:O94331"}


id: PBO:0059069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor sulfurase","termid":"PBO:0059069"}


id: PBO:0047176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 9","termid":"PBO:0047176"}


id: MOD:00983
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asp transamidation with piperidine","termid":"MOD:00983"}


id: FYPO:0004833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased during anaphase B. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["GO:1990023","GO:1902967","PMID:16824200","PomBase:mah","GO:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle midzone during anaphase","termid":"FYPO:0004831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone during anaphase B","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone during anaphase B","type":"exact"},{"name":"decreased protein localization to spindle midzone during anaphase B during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle midzone during mitotic anaphase B","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone during anaphase B","type":"exact"}],"termid":"FYPO:0004833"}


id: PBO:0079196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 25, pseudogene","termid":"PBO:0079196"}


id: GO:0140669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of production of oxytocin.","definition_xrefs":["PMID:25096581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of oxytocin production","termid":"GO:0140667"},{"relation_name":"negatively_regulates","term_name":"oxytocin production","termid":"GO:0036162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxytocin production","termid":"GO:0140669"}


id: FYPO:0006237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of half-mer polysomes in the cytosol. A half-mer polysome is a complex consisting of an mRNA bound to a single small ribosomal subunit, followed by one or more complete bound ribosomes.","definition_xrefs":["PomBase:mah","PMID:18065650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cytosolic half-mer polysome level","synonyms":[{"name":"cytosolic half-mer polysomes present at normal level","type":"exact"},{"name":"normal cytosolic half-mer polysome level during mitotic cell cycle","type":"related"},{"name":"normal cytosolic half-mer polysome level during vegetative growth","type":"exact"},{"name":"normal cytosolic halfmer polysome level","type":"exact"},{"name":"normal level of cytosolic half-mer polysomes","type":"related"}],"termid":"FYPO:0006237"}


id: GO:0160054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of microfibril.","definition_xrefs":["PMID:32855533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"microfibril assembly","termid":"GO:0160054"}


id: FYPO:0000234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules is abnormal during interphase of the mitotic cell cycle. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule nucleation during vegetative growth","termid":"FYPO:0005692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cytoplasmic interphase microtubule nucleation","synonyms":[{"name":"abnormal cytoplasmic interphase microtubule nucleation during vegetative growth","type":"exact"},{"name":"abnormal cytoplasmic microtubule nucleation during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal cytoplasmic microtubule nucleation during mitotic interphase","type":"exact"},{"name":"abnormal interphase cytoplasmic microtubule nucleation","type":"exact"},{"name":"abnormal interphase microtubule nucleation","type":"exact"}],"termid":"FYPO:0000234"}


id: GO:0072212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the metanephros progresses from its initial formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in metanephros development (obsolete GO:0072212)","termid":"GO:0072212"}


id: FYPO:0001499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cytochalasin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cytochalasin B","synonyms":[{"name":"resistance to cytochalasin B during mitotic cell cycle","type":"related"},{"name":"resistance to cytochalasin B during vegetative growth","type":"exact"},{"name":"resistant to cytochalasin B","type":"exact"}],"termid":"FYPO:0001499"}


id: PBO:0065446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 3 pseudogene 1","termid":"PBO:0065446"}


id: SO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Different sources report differing sequences.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequencing_information","termid":"SO:0001082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_conflict","secondary_identifiers":["BS:00069"],"synonyms":[{"name":"conflict","type":"exact"}],"termid":"SO:0001085"}


id: PBO:0030623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha-glucosidase_activity","termid":"PBO:0030623"}


id: PBO:0044282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 5","termid":"PBO:0044282"}


id: PBO:0035747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_eMTOC_present_in_decreased_numbers","termid":"PBO:0035747"}


id: GO:1990443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own threonine amino acid residues, or a threonine residue on an identical protein.","definition_xrefs":["PMID:7803855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine autophosphorylation","termid":"GO:1990443"}


id: FYPO:0004646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of anaphase of mitosis normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of mitotic anaphase","synonyms":[{"name":"normal duration of anaphase during mitotic cell cycle","type":"exact"},{"name":"normal duration of anaphase of mitosis","type":"related"},{"name":"normal duration of mitotic anaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0004646"}


id: GO:0030262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Alterations undergone by nuclei at the molecular and morphological level as part of the execution phase of apoptosis.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly involved in execution phase of apoptosis","termid":"GO:0006921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic nuclear changes","synonyms":[{"name":"apoptotic nuclear change","type":"narrow"}],"termid":"GO:0030262"}


id: GO:0018705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dichloroethene + 2 H+ + 2 e- = HCl + vinyl chloride.","definition_xrefs":["UM-BBD_enzymeID:e0272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1,2-dichloroethene reductive dehalogenase activity","synonyms":[{"name":"1,2-dichloroethylene reductive dehalogenase activity","type":"exact"}],"termid":"GO:0018705"}


id: PBO:0075766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 5","termid":"PBO:0075766"}


id: GO:0005657
data:
  {"annotated_genes":["SJAG_00327","SJAG_03451","SJAG_02610","SJAG_00611","SJAG_00874","SJAG_04150","SJAG_01698","SJAG_05301","SJAG_03780","SJAG_03898","SJAG_00618","SJAG_04671","SJAG_00958","SJAG_02439","SJAG_02908","SJAG_02198","SJAG_04272","SJAG_04994","SJAG_01267","SJAG_00399","SJAG_02800","SJAG_00729","SJAG_03128","SJAG_03855","SJAG_00536","SJAG_05239","SJAG_04995","SJAG_03722","SJAG_00272","SJAG_03927","SJAG_02074","SJAG_00198","SJAG_02182","SJAG_02172","SJAG_00863","SJAG_04210","SJAG_00884","SJAG_01354","SJAG_05232","SJAG_02724","SJAG_02818","SJAG_02627","SJAG_03097","SJAG_03495","SJAG_00814","SJAG_05197","SJAG_04877","SJAG_04183","SJAG_04791","SJAG_02667","SJAG_00153","SJAG_00857","SJAG_01823","SJAG_01010","SJAG_02394","SJAG_04879","SJAG_02348","SJAG_00696","SJAG_04190","SJAG_01762"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113422,95530,93556,101423],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[91362,101026,105216,98943],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[107651,112356,111617],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[90086,91394,103086,108382,108934,85726],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"},{"annotations":[111376,111501,93461,86812,95540,100266,107372,109289,103942,97611,106052,114254,100099,109268,86587,111207,107749,92137,106328,109674,96720,99439,89101,103450,103839,90951,98993,91197,95422,107490,108008,108845,104156,99070,100335,88674,88084,102520,103351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043596"},{"annotations":[108620],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043601"},{"annotations":[95534,101427],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990077"},{"annotations":[95476,102736,104619],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031298"}]},"cv_name":"cellular_component","definition":"The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00198":null,"SJAG_00272":null,"SJAG_00327":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00611":null,"SJAG_00618":null,"SJAG_00696":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00857":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_00958":null,"SJAG_01010":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01698":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02198":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02439":null,"SJAG_02610":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02724":null,"SJAG_02800":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03097":null,"SJAG_03128":null,"SJAG_03451":null,"SJAG_03495":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04272":null,"SJAG_04671":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"replication fork","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Replication_fork"],"synonyms":[{"name":"replication focus","type":"related"}],"termid":"GO:0005657","terms_by_termid":{"GO:0005658":null,"GO:0005662":null,"GO:0031298":null,"GO:0043596":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null,"GO:1990077":null}}


id: PBO:0081498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 396","termid":"PBO:0081498"}


id: PBO:0043655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit zeta 1","termid":"PBO:0043655"}


id: PBO:0059289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 4","termid":"PBO:0059289"}


id: PBO:0072682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and FYVE domain containing 3","termid":"PBO:0072682"}


id: GO:0120057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of small intestinal transit","synonyms":[{"name":"regulation of small bowel transit","type":"exact"},{"name":"regulation of small intestine transit","type":"exact"}],"termid":"GO:0120057"}


id: PBO:0002582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT5 family histone acetyltransferase Mst1","termid":"PBO:0002582"}


id: PBO:0090227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial threonine-tRNA ligase","termid":"PBO:0090227"}


id: PBO:0087178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I largest subunit A190","termid":"PBO:0087178"}


id: PBO:0057043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 133a-2","termid":"PBO:0057043"}


id: PBO:0065036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 1","termid":"PBO:0065036"}


id: GO:0070793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of conidiophore development, a process that leads to the formation of a conidiophore. The conidiophore is a specialized hypha that extends aerially from the growth substrate and bears conidia, or asexual spores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of conidiophore development","termid":"GO:0070793"}


id: GO:1900732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polyketide biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"polyketide biosynthetic process","termid":"GO:0030639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of polyketide biosynthetic process","synonyms":[{"name":"regulation of polyketide anabolism","type":"exact"},{"name":"regulation of polyketide biosynthesis","type":"exact"},{"name":"regulation of polyketide formation","type":"exact"},{"name":"regulation of polyketide synthesis","type":"exact"}],"termid":"GO:1900732"}


id: GO:0034128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of MyD88-independent toll-like receptor signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of toll-like receptor signaling pathway","termid":"GO:0034122"},{"relation_name":"is_a","term_name":"regulation of MyD88-independent toll-like receptor signaling pathway","termid":"GO:0034127"},{"relation_name":"negatively_regulates","term_name":"MyD88-independent toll-like receptor signaling pathway","termid":"GO:0002756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of MyD88-independent toll-like receptor signaling pathway","synonyms":[{"name":"negative regulation of MyD88-independent TLR signaling pathway","type":"exact"},{"name":"negative regulation of MyD88-independent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034128"}


id: PBO:0077937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTEP2-CSNK1E readthrough","termid":"PBO:0077937"}


id: GO:0033519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytyl diphosphate, (2E)-3,7,11,15-tetramethylhexadec-2-en-1-yl trihydrogen diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phytyl diphosphate metabolic process","synonyms":[{"name":"phytyl diphosphate metabolism","type":"exact"}],"termid":"GO:0033519"}


id: GO:0030484
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The contractile fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete muscle fiber (obsolete GO:0030484)","synonyms":[{"name":"muscle fiber","type":"exact"},{"name":"muscle fibre","type":"exact"}],"termid":"GO:0030484"}


id: PBO:0038991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate lyase","termid":"PBO:0038991"}


id: PBO:0089334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane-associated ribosome receptor Mba1","termid":"PBO:0089334"}


id: SO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 25S_rRNA, which functions as a component of the large subunit of the ribosome in some eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_25S_gene","synonyms":[{"name":"25S rRNA gene","type":"exact"},{"name":"25S_rRNA_gene","type":"exact"}],"termid":"SO:0002242"}


id: GO:0140340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to a cerebroside and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["PMID:9132017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid transfer activity","termid":"GO:0017089"},{"relation_name":"is_a","term_name":"ceramide transfer activity","termid":"GO:0120017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0120013","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cerebroside transfer activity","synonyms":[{"name":"cerebroside carrier activity","type":"exact"}],"termid":"GO:0140340"}


id: PBO:0076367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 4, pseudogene","termid":"PBO:0076367"}


id: PBO:0089150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission protein TPR repeat-like","termid":"PBO:0089150"}


id: PBO:0036029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_heat","termid":"PBO:0036029"}


id: PBO:0045754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECE1 antisense RNA 1","termid":"PBO:0045754"}


id: FYPO:0005176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ferric-chelate reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal ferric-chelate reductase activity","termid":"FYPO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased ferric-chelate reductase activity","termid":"FYPO:0005176"}


id: GO:0047166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkenylglycerophosphoethanolamine + acyl-CoA = 1-alkenyl-2-acyl-glycerophosphoethanolamine + CoA.","definition_xrefs":["MetaCyc:2.3.1.121-RXN","EC:2.3.1.121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"1-alkenylglycerophosphoethanolamine O-acyltransferase activity","secondary_identifiers":["RHEA:16245"],"synonyms":[{"name":"acyl-CoA:1-alkenylglycerophosphoethanolamine O-acyltransferase activity","type":"related"}],"termid":"GO:0047166"}


id: GO:0035472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the choriogonadotropin hormone to initiate a change in cell activity.","definition_xrefs":["PMID:1922095","ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"choriogonadotropin hormone receptor activity","synonyms":[{"name":"CG receptor activity","type":"exact"},{"name":"chorio-gonadotrophin receptor activity","type":"exact"},{"name":"chorionic gonadotropin hormone receptor","type":"exact"}],"termid":"GO:0035472"}


id: PBO:0080938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc activated ion channel","termid":"PBO:0080938"}


id: GO:0000833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate = 4,5-bisdiphosphoinositol-1D-myoinositol (1,2,3,6)tetrakisphosphate.","definition_xrefs":["GOC:elh","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol heptakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"inositol heptakisphosphate 4-kinase activity","synonyms":[{"name":"IP7 4-kinase activity","type":"exact"},{"name":"diphosphoinositol-pentakisphosphate 4-kinase activity","type":"exact"}],"termid":"GO:0000833"}


id: GO:0106395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"},{"relation_name":"positively_regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"positive regulation of palmitic acid catabolic process","termid":"GO:0106395"}


id: PBO:0060495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 1","termid":"PBO:0060495"}


id: GO:0004589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + NAD+ = H+ + NADH + orotate.","definition_xrefs":["RHEA:13513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R01869","MetaCyc:OROTATE-REDUCTASE-NADH-RXN","EC:1.3.1.14"],"synonyms":[{"name":"(S)-dihydroorotate:NAD+ oxidoreductase activity","type":"related"},{"name":"orotate reductase (NADH) activity","type":"exact"}],"termid":"GO:0004589"}


id: PBO:0074286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 1","termid":"PBO:0074286"}


id: SO:0001514
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is not in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direct","termid":"SO:0001514"}


id: GO:1904498
data:
  {"annotated_genes":["SJAG_04703","SJAG_00279","SJAG_02831"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88449,106912,114714],"is_not":false,"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"Any protein localization to actomyosin contractile ring that is involved in mitotic cytokinesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:25688133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"is_a","term_name":"protein localization to actomyosin contractile ring","termid":"GO:1990179"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_02831":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0051179","GO:0000281","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"protein localization to mitotic actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actomyosin contractile ring involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localisation to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"protein localization to actomyosin contractile ring during mitotic cytokinesis","type":"related"},{"name":"protein localization to actomyosin contractile ring involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"}],"termid":"GO:1904498","terms_by_termid":{"GO:1904498":null}}


