# terms

id: FYPO:0004125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K4 dimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 dimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me2 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 dimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 dimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004125"}


id: GO:1900785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving naphtho-gamma-pyrone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"naphtho-gamma-pyrone metabolic process","synonyms":[{"name":"naphtho-gamma-pyrone metabolism","type":"exact"},{"name":"naphtho-gamma-pyrones metabolic process","type":"related"},{"name":"naphtho-gamma-pyrones metabolism","type":"related"}],"termid":"GO:1900785"}


id: PBO:0085088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear envelope protein; required for SPB insertion, SPB duplication, Kar5p localization near the SPB and nuclear fusion; interacts with Mps2p to tether half-bridge to core SPB; N-terminal acetylation by Eco1p regulates its role in nuclear organization; localizes to the SPB half bridge and telomeres during meiosis; required with Ndj1p and Csm4p for meiotic bouquet formation and telomere-led rapid prophase movement; member of the SUN protein family (Sad1-UNC-84 homology)","termid":"PBO:0085088"}


id: PBO:0091442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved fungal protein Rrg8","termid":"PBO:0091442"}


id: MOD:01591
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 304.205359 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.000001 Da","termid":"MOD:01515"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199-304.206 Da","termid":"MOD:01592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}


id: FYPO:0003914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal when the population in which the cell is found is in stationary phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level in stationary phase","synonyms":[{"name":"increased protein accumulation in stationary phase","type":"related"}],"termid":"FYPO:0003914"}


id: PBO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, shugoshin, Sgo1","termid":"PBO:0003409"}


id: GO:0004555
data:
  {"annotated_genes":["SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107620],"is_not":false,"summary":null,"term":"GO:0004555"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha,alpha-trehalose + H2O = 2 D-glucose.","definition_xrefs":["PMID:19897915","RHEA:32675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalase activity","termid":"GO:0015927"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"alpha,alpha-trehalase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-188985","EC:3.2.1.28","MetaCyc:TREHALA-RXN"],"synonyms":[{"name":"alpha,alpha-trehalose glucohydrolase activity","type":"related"}],"termid":"GO:0004555","terms_by_termid":{"GO:0004555":null}}


id: GO:0032336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of activin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activin secretion","termid":"GO:0032335"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"negatively_regulates","term_name":"activin secretion","termid":"GO:0032333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of activin secretion","synonyms":[{"name":"down regulation of activin secretion","type":"exact"},{"name":"down-regulation of activin secretion","type":"exact"},{"name":"downregulation of activin secretion","type":"exact"},{"name":"inhibition of activin secretion","type":"narrow"}],"termid":"GO:0032336"}


id: GO:0015548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of organomercurial compounds from one side of a membrane to the other. Organomercurial substances are any organic compound containing a mercury atom.","definition_xrefs":["PMID:18793329","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercurial transmembrane transporter activity (obsolete GO:0015548)","synonyms":[{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity","type":"narrow"},{"name":"organomercurial transporter activity","type":"related"}],"termid":"GO:0015548"}


id: PBO:0052122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCND3 intronic transcript 1","termid":"PBO:0052122"}


id: GO:0032247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a purine nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleoside transport","termid":"GO:0032243"},{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of purine nucleoside transport","synonyms":[{"name":"down regulation of purine nucleoside transport","type":"exact"},{"name":"down-regulation of purine nucleoside transport","type":"exact"},{"name":"downregulation of purine nucleoside transport","type":"exact"},{"name":"inhibition of purine nucleoside transport","type":"narrow"}],"termid":"GO:0032247"}


id: GO:0072305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the metanephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072040"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:0072304"},{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900212"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis","termid":"GO:0072309"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","synonyms":[{"name":"negative regulation of mesenchymal stem cell apoptosis involved in metanephric nephron morphogenesis","type":"narrow"},{"name":"negative regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis","type":"exact"}],"termid":"GO:0072305"}


id: PBO:0048650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein gamma 3","termid":"PBO:0048650"}


id: PATO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a continuous convex surface with an axis of symmetry and one axis longer than the other; egg-shaped.","definition_xrefs":["PATOC:mc"],"direct_ancestors":[{"relation_name":"has_cross_section","term_name":"oblong","termid":"PATO:0000946"},{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovate","synonyms":[{"name":"eccentric","type":"related"},{"name":"egg-shaped","type":"exact"},{"name":"oval","type":"exact"},{"name":"ovoid","type":"exact"}],"termid":"PATO:0001891"}


id: PR:000085720
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P09988, 2-136, Lys-37, MOD:00083.","definition_xrefs":["PMID:37459529","PRO:DAN","PomBase:VW"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me3(K36)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-37, MOD:00083","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K36-trimethylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K36Me3","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-37, MOD:00083","type":"related"},{"name":"hht1/Me3(K36)","type":"exact"}],"termid":"PR:000085720"}


id: PBO:0066813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 112","termid":"PBO:0066813"}


id: PR:P87052
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 10 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.04","synonyms":[{"name":"Spom972h-mug10","type":"exact"}],"termid":"PR:P87052"}


id: PBO:0071742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 40","termid":"PBO:0071742"}


id: GO:0071416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tropane stimulus. Tropane is a nitrogenous bicyclic organic compound mainly known for a group of alkaloids derived from it (called tropane alkaloids), which include, among others, atropine and cocaine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tropane","termid":"GO:0014073"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tropane","termid":"GO:0071416"}


id: PBO:0090912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II and III complex Rab GEF subunit Bet5","termid":"PBO:0090912"}


id: FYPO:0003272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium hypochlorite.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on sodium hypochlorite","synonyms":[{"name":"normal cell population growth in presence of sodium hypochlorite","type":"exact"},{"name":"normal cell population growth on NaOCl","type":"exact"},{"name":"normal cell population growth on sodium hypochlorite","type":"exact"},{"name":"normal cellular response to sodium hypochlorite","type":"related"},{"name":"normal vegetative cell population growth on sodium hypochlorite","type":"exact"}],"termid":"FYPO:0003272"}


id: FYPO:0003002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is decreased during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during mitotic metaphase","termid":"FYPO:0006175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to centromere during mitotic metaphase","synonyms":[{"name":"decreased protein localisation to centromere during mitotic metaphase","type":"exact"},{"name":"decreased protein localisation to chromosome, centromeric region during mitotic metaphase","type":"exact"},{"name":"decreased protein localization to centromere during metaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome, centric region during mitotic metaphase","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric region during mitotic metaphase","type":"exact"},{"name":"reduced protein localization to centromere during mitotic metaphase","type":"exact"}],"termid":"FYPO:0003002"}


id: GO:0097131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D1 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D1-CDK6 complex","termid":"GO:0097131"}


id: PR:Q9URY8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chloride anion exchanger that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02282","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate permease C869.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.05c","secondary_identifiers":["UniProtKB:Q9URY8"],"synonyms":[{"name":"Spom972h-SLC26A3","type":"exact"}],"termid":"PR:Q9URY8"}


id: PBO:0051979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jade family PHD finger 2","termid":"PBO:0051979"}


id: PBO:0052837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-2","termid":"PBO:0052837"}


id: PBO:0081199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 1","termid":"PBO:0081199"}


id: PBO:0086746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; potential Cdc28p substrate; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2","termid":"PBO:0086746"}


id: GO:1903534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lactose biosynthetic process.","definition_xrefs":["PMID:12018418","GOC:mr","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"lactose biosynthetic process","termid":"GO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of lactose biosynthetic process","synonyms":[{"name":"regulation of lactose anabolism","type":"exact"},{"name":"regulation of lactose biosynthesis","type":"exact"},{"name":"regulation of lactose formation","type":"exact"},{"name":"regulation of lactose synthesis","type":"exact"}],"termid":"GO:1903534"}


id: FYPO:0006584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to shmoo tip membrane","synonyms":[{"name":"abnormal protein localisation to shmoo tip membrane","type":"exact"},{"name":"abnormal protein localization to mating projection tip membrane","type":"exact"},{"name":"abnormal protein localization to plasma membrane at shmoo tip","type":"exact"},{"name":"abnormal protein localization to shmoo membrane fusion domain","type":"exact"},{"name":"abnormal protein localization to shmoo projection membrane","type":"related"}],"termid":"FYPO:0006584"}


id: GO:0061931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of erythrocyte enucleation.","definition_xrefs":["PMID:25241935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of erythrocyte enucleation","termid":"GO:0061930"},{"relation_name":"positively_regulates","term_name":"erythrocyte enucleation","termid":"GO:0043131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte enucleation","termid":"GO:0061931"}


id: GO:0008618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 7-methylguanosine, a modified nucleoside that forms a cap at the 5'-terminus of eukaryotic mRNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"7-methylguanosine metabolic process","synonyms":[{"name":"7-methylguanosine metabolism","type":"exact"}],"termid":"GO:0008618"}


id: FYPO:0007499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more cohesin-associated regions (CARs) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PMID:31895039","PMID:27226485","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"increased chromatin binding at cohesin associated regions","synonyms":[{"name":"increased chromatin binding at CARs","type":"exact"},{"name":"increased chromatin binding at cohesin associated regions during mitotic cell cycle","type":"related"},{"name":"increased chromatin binding at cohesin associated regions during vegetative growth","type":"exact"}],"termid":"FYPO:0007499"}


id: PBO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 69","termid":"PBO:0050366"}


id: PBO:0004401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex non-SMC subunit Cnd1","termid":"PBO:0004401"}


id: GO:1900306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltoheptaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptasaccharide transport","termid":"GO:1900294"},{"relation_name":"regulates","term_name":"maltoheptaose transport","termid":"GO:2001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of maltoheptaose transport","termid":"GO:1900306"}


id: PBO:0055382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2812","termid":"PBO:0055382"}


id: PBO:0078557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 45","termid":"PBO:0078557"}


id: FYPO:0004687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to lovastatin. Cells stop growing (and may die) at a concentration of lovastatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to lovastatin","synonyms":[{"name":"hypersensitive to lovastatin","type":"exact"},{"name":"sensitive to lovastatin during mitotic cell cycle","type":"related"},{"name":"sensitive to lovastatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004687"}


id: PBO:0080888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein C1","termid":"PBO:0080888"}


id: GO:0000479
data:
  {"annotated_genes":["SJAG_00344","SJAG_04916","SJAG_04524","SJAG_00772","SJAG_03846","SJAG_00955","SJAG_02250","SJAG_06613","SJAG_01581","SJAG_03234","SJAG_02547","SJAG_01476","SJAG_01551","SJAG_02374","SJAG_02275","SJAG_00897","SJAG_04224","SJAG_02644","SJAG_02553","SJAG_04582","SJAG_03796","SJAG_03789","SJAG_03425","SJAG_01623","SJAG_04174","SJAG_00965","SJAG_03952"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84522,90457,104812],"is_not":false,"summary":null,"term":"GO:0000479"},{"annotations":[100233,114632,87820,91086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000448"},{"annotations":[103728,111300,95930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000480"},{"annotations":[101760,92629,95609,109599,104057,100875,95931,101759,111407,100657,101666,90837,89535,111492,103729,99240,114666,92921,105115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000447"},{"annotations":[101667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000461"},{"annotations":[95932,111301,105116,103730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with three genes, in this order, are produced in the nuclei of many eukaryotic species, including S. cerevisiae.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00344":null,"SJAG_00772":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01476":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03846":null,"SJAG_03952":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000479","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000461":null,"GO:0000472":null,"GO:0000479":null,"GO:0000480":null}}


id: GO:0099645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a neurotransmitter is transported to, or maintained in, a location within the membrane adjacent to a postsynaptic specialization (e.g. postsynaptic density).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"protein localization to postsynaptic specialization membrane","termid":"GO:0099633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter receptor localization to postsynaptic specialization membrane","synonyms":[{"name":"neurotransmitter receptor localisation in postsynaptic specialization membrane","type":"exact"}],"termid":"GO:0099645"}


id: GO:0008184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate.","definition_xrefs":["EC:2.4.1.1","MetaCyc:GLYCOPHOSPHORYL-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"glycogen phosphorylase activity","secondary_identifiers":["Reactome:R-HSA-453339","Reactome:R-HSA-71590","Reactome:R-HSA-453358","Reactome:R-HSA-71515"],"termid":"GO:0008184"}


id: GO:0051597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylmercury stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methylmercury","synonyms":[{"name":"response to CH3-Hg+","type":"exact"},{"name":"response to MeHg+","type":"exact"}],"termid":"GO:0051597"}


id: GO:0102140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + [heparan sulfate]-N-acetyl-alpha-D-glucosamine = acetate + H+ + [heparan sulfate]-alpha-D-glucosamine.","definition_xrefs":["GOC:pz","EC:3.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0019213","GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"heparan sulfate N-deacetylase activity","secondary_identifiers":["MetaCyc:RXN-11557"],"termid":"GO:0102140"}


id: FYECO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are initially grown in glucose minimal medium to stationary phase followed by transfer to H2O and continued growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth to stationary phase","termid":"FYECO:0000158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to stationary phase in rich medium followed by transfer to H2O","termid":"FYECO:0000157"}


id: PBO:0081172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 9 pseudogene 2","termid":"PBO:0081172"}


id: PBO:0071344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 2","termid":"PBO:0071344"}


id: PBO:0041087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and PHD finger containing 3","termid":"PBO:0041087"}


id: PBO:0075111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 160","termid":"PBO:0075111"}


id: PR:Q10262
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug115 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 115 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.14c","synonyms":[{"name":"Spom972h-mug115","type":"exact"}],"termid":"PR:Q10262"}


id: SO:0002039
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A shRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"shRNA_primary_transcript","termid":"SO:0002038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_shRNA_primary_transcript","synonyms":[{"name":"miR encoding shRNA primary transcript","type":"exact"}],"termid":"SO:0002039"}


id: PBO:0083764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential light chain for Myo1p; light chain for Myo2p; stabilizes Myo2p by binding to the neck region; interacts with Myo1p, Iqg1p, and Myo2p to coordinate formation and contraction of the actomyosin ring with targeted membrane deposition","termid":"PBO:0083764"}


id: PR:O59770
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11599:SF10","OMA:SCHPO04533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.04c","secondary_identifiers":["UniProtKB:O59770"],"synonyms":[{"name":"Spom972h-PSMA3","type":"exact"}],"termid":"PR:O59770"}


id: GO:0060787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of the formation of the posterior neural plate, the posterior end of the flat, thickened layer of ectodermal cells known as the neural plate.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"positively_regulates","term_name":"posterior neural plate formation","termid":"GO:0090018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"positive regulation of posterior neural plate formation by FGF receptor signaling pathway","type":"related"},{"name":"positive regulation of posterior neural plate formation by fibroblast growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060787"}


id: PBO:0029625
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0029625"}


id: GO:0009953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.","definition_xrefs":["GOC:dph","GOC:tb","GOC:isa_complete","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral pattern formation","synonyms":[{"name":"dorsal-ventral pattern formation","type":"exact"},{"name":"dorsal/ventral pattern specification","type":"narrow"},{"name":"dorsoventral pattern formation","type":"exact"}],"termid":"GO:0009953"}


id: GO:0050120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + H2O + NAD+ = N-acetyl-D-glucosaminate + 2 H+ + NADH.","definition_xrefs":["EC:1.1.1.240","RHEA:23144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"N-acetylhexosamine 1-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01202","MetaCyc:N-ACETYLHEXOSAMINE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"N-acetyl-D-hexosamine dehydrogenase activity","type":"related"},{"name":"N-acetyl-D-hexosamine:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"N-acetylhexosamine dehydrogenase activity","type":"related"}],"termid":"GO:0050120"}


id: PBO:0065966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51AP1 pseudogene 1","termid":"PBO:0065966"}


id: PR:O94312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain-containing protein2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.07c","synonyms":[{"name":"Spom972h-pdp2","type":"exact"}],"termid":"PR:O94312"}


id: PBO:0062473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily G member 1","termid":"PBO:0062473"}


id: MOD:02002
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with a palmitoleylsulfanyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"palmitoleylated residue","termid":"MOD:01423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-palmitoleylated residue","termid":"MOD:02002"}


id: PBO:0056068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member D","termid":"PBO:0056068"}


id: GO:0021674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 8 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:curators","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 8 development","termid":"GO:0021574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 8 morphogenesis","termid":"GO:0021674"}


id: PBO:0053143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6E, pseudogene","termid":"PBO:0053143"}


id: PBO:0044531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defender against cell death 1","termid":"PBO:0044531"}


id: PBO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf PARP type zinc finger protein","termid":"PBO:0001397"}


id: PBO:0057025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-2","termid":"PBO:0057025"}


id: PBO:0057306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516a-1","termid":"PBO:0057306"}


id: PATO:0000690
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's being marked by breaks or interruptions.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discontinuous","secondary_identifiers":["PATO:0000426"],"synonyms":[{"name":"intermittent","type":"related"},{"name":"interrupted","type":"exact"}],"termid":"PATO:0000690"}


id: PBO:0052142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 8","termid":"PBO:0052142"}


id: PBO:0080019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 5","termid":"PBO:0080019"}


id: PBO:0084959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYND domain-containing protein; component of the Mub1p-Ubr2p-Rad6p ubiquitin ligase complex, required for ubiquitination and degradation of Rpn4p; interacts with Ubr2p (E3) and indirectly with Rad6p (E2); short-lived protein degraded in a Ubr2p/Rad6p dependent manner; proposed to function as both a partner and substrate of the Ubr2p/Rad6p ubiquitin ligase; similar to the A. nidulans samB gene","termid":"PBO:0084959"}


id: PBO:0028215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_arsenate_reductase_activity","termid":"PBO:0028215"}


id: SO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"engineered_gene","termid":"SO:0000280"},{"relation_name":"is_a","term_name":"foreign_gene","termid":"SO:0000285"},{"relation_name":"is_a","term_name":"engineered_foreign_region","termid":"SO:0000805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_gene","synonyms":[{"name":"engineered foreign gene","type":"exact"}],"termid":"SO:0000281"}


id: PBO:0070700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 4","termid":"PBO:0070700"}


id: PBO:0049810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 3","termid":"PBO:0049810"}


id: GO:0001588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neurotransmitter dopamine and activating adenylate cyclase via coupling to Gs to initiate a change in cell activity.","definition_xrefs":["ISBN:0953351033","IUPHAR_RECEPTOR:2260","IUPHAR_RECEPTOR:2252","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine neurotransmitter receptor activity","termid":"GO:0004952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"dopamine neurotransmitter receptor activity, coupled via Gs","secondary_identifiers":["GO:0001589","GO:0001590"],"synonyms":[{"name":"dopamine D1 receptor activity","type":"narrow"},{"name":"dopamine D5 receptor activity","type":"narrow"}],"termid":"GO:0001588"}


id: PBO:0076080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin interacting protein 2","termid":"PBO:0076080"}


id: GO:0033125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of GTP catabolic process (obsolete GO:0033125)","synonyms":[{"name":"negative regulation of GTP breakdown","type":"exact"},{"name":"negative regulation of GTP catabolism","type":"exact"},{"name":"negative regulation of GTP degradation","type":"exact"}],"termid":"GO:0033125"}


id: FYPO:0000361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the nucleolus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal nucleolus organization","termid":"FYPO:0000814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nucleolar morphology","synonyms":[{"name":"abnormal nucleolar morphology during mitotic cell cycle","type":"related"},{"name":"abnormal nucleolar morphology during vegetative growth","type":"exact"},{"name":"nucleolar morphology: abnormal","type":"related"}],"termid":"FYPO:0000361"}


id: GO:1901305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of spermidine biosynthetic process","termid":"GO:1901304"},{"relation_name":"negatively_regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spermidine biosynthetic process","synonyms":[{"name":"down regulation of spermidine anabolism","type":"exact"},{"name":"down regulation of spermidine biosynthesis","type":"exact"},{"name":"down regulation of spermidine biosynthetic process","type":"exact"},{"name":"down regulation of spermidine formation","type":"exact"},{"name":"down regulation of spermidine synthesis","type":"exact"},{"name":"down-regulation of spermidine anabolism","type":"exact"},{"name":"down-regulation of spermidine biosynthesis","type":"exact"},{"name":"down-regulation of spermidine biosynthetic process","type":"exact"},{"name":"down-regulation of spermidine formation","type":"exact"},{"name":"down-regulation of spermidine synthesis","type":"exact"},{"name":"downregulation of spermidine anabolism","type":"exact"},{"name":"downregulation of spermidine biosynthesis","type":"exact"},{"name":"downregulation of spermidine biosynthetic process","type":"exact"},{"name":"downregulation of spermidine formation","type":"exact"},{"name":"downregulation of spermidine synthesis","type":"exact"},{"name":"inhibition of spermidine anabolism","type":"exact"},{"name":"inhibition of spermidine biosynthesis","type":"exact"},{"name":"inhibition of spermidine biosynthetic process","type":"narrow"},{"name":"inhibition of spermidine formation","type":"exact"},{"name":"inhibition of spermidine synthesis","type":"exact"},{"name":"negative regulation of spermidine anabolism","type":"exact"},{"name":"negative regulation of spermidine biosynthesis","type":"exact"},{"name":"negative regulation of spermidine formation","type":"exact"},{"name":"negative regulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901305"}


id: SO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Similarity due to common ancestry.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved","termid":"SO:0000856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous","termid":"SO:0000857"}


id: SO:0001941
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 91st residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K91_acetylation_site","synonyms":[{"name":"H4K91 acetylation site","type":"exact"},{"name":"H4K91ac","type":"exact"}],"termid":"SO:0001941"}


id: PR:Q9C0V5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB7E8.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0V5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB7E8.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB7E8.01","synonyms":[{"name":"Spom972h-SPBPB7E8.01","type":"exact"}],"termid":"PR:Q9C0V5"}


id: GO:0040021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in the germ line of a hermaphrodite.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hermaphrodite germ-line sex determination","secondary_identifiers":["GO:0042005"],"termid":"GO:0040021"}


id: PBO:0028939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_growth","termid":"PBO:0028939"}


id: GO:0001080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to an increase in the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:txnOH","PMID:19104072","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0001079"},{"relation_name":"is_a","term_name":"nitrogen catabolite activation of transcription","termid":"GO:0090294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"nitrogen catabolite activation of transcription from RNA polymerase II promoter","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter by nitrogen catabolites","type":"exact"}],"termid":"GO:0001080"}


id: PBO:0068990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 234, pseudogene","termid":"PBO:0068990"}


id: PBO:0071398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 4","termid":"PBO:0071398"}


id: PBO:0076676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1 pseudogene 1","termid":"PBO:0076676"}


id: GO:0018634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-pinene + NADH + H+ + O2 = NAD+ + H2O + alpha-pinene oxide.","definition_xrefs":["RHEA:32891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alpha-pinene monooxygenase (NADH) activity","secondary_identifiers":["EC:1.14.13.155","UM-BBD_reactionID:r0742"],"synonyms":[{"name":"alpha-pinene monooxygenase [NADH] activity","type":"exact"}],"termid":"GO:0018634"}


id: GO:0018507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,4R)-3,4-dihydrophenanthrene-3,4-diol + NAD+ = H+ + NADH + phenanthrene-3,4-diol.","definition_xrefs":["RHEA:16253","EC:1.3.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cis-3,4-dihydrophenanthrene-3,4-diol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04151","MetaCyc:1.3.1.49-RXN","UM-BBD_reactionID:r0488"],"synonyms":[{"name":"(+)-cis-3,4-dihydrophenanthrene-3,4-diol:NAD+ 3,4-oxidoreductase activity","type":"related"},{"name":"cis-3,4-dihydroxy-3,4-dihydrophenanthrene dehydrogenase activity","type":"exact"}],"termid":"GO:0018507"}


id: GO:0043204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the cell soma (neuronal cell body) that excludes the nucleus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perikaryon","synonyms":[{"name":"cell soma cytoplasm","type":"related"}],"termid":"GO:0043204"}


id: PR:O94659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nog1 gene.","definition_xrefs":["UniProtKB:O94659","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar GTP-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.01c","synonyms":[{"name":"Spom972h-nog1","type":"exact"}],"termid":"PR:O94659"}


id: GO:1900544
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of purine nucleotide metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide metabolic process","termid":"GO:0045981"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"positively_regulates","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"positive regulation of purine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of purine metabolic process","type":"narrow"},{"name":"activation of purine metabolism","type":"narrow"},{"name":"activation of purine nucleotide metabolic process","type":"narrow"},{"name":"activation of purine nucleotide metabolism","type":"narrow"},{"name":"positive regulation of purine metabolic process","type":"narrow"},{"name":"positive regulation of purine metabolism","type":"narrow"},{"name":"positive regulation of purine nucleotide metabolism","type":"exact"},{"name":"up regulation of purine metabolic process","type":"narrow"},{"name":"up regulation of purine metabolism","type":"narrow"},{"name":"up regulation of purine nucleotide metabolic process","type":"exact"},{"name":"up regulation of purine nucleotide metabolism","type":"exact"},{"name":"up-regulation of purine metabolic process","type":"narrow"},{"name":"up-regulation of purine metabolism","type":"narrow"},{"name":"up-regulation of purine nucleotide metabolic process","type":"exact"},{"name":"up-regulation of purine nucleotide metabolism","type":"exact"},{"name":"upregulation of purine metabolic process","type":"narrow"},{"name":"upregulation of purine metabolism","type":"narrow"},{"name":"upregulation of purine nucleotide metabolic process","type":"exact"},{"name":"upregulation of purine nucleotide metabolism","type":"exact"}],"termid":"GO:1900544","terms_by_termid":{"GO:1905857":null}}


id: GO:0030671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-coated phagocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated endocytic vesicle membrane","termid":"GO:0030669"},{"relation_name":"is_a","term_name":"phagocytic vesicle membrane","termid":"GO:0030670"},{"relation_name":"part_of","term_name":"clathrin-coated phagocytic vesicle","termid":"GO:0045336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"clathrin-coated phagocytic vesicle membrane","termid":"GO:0030671"}


id: PBO:0059601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 13","termid":"PBO:0059601"}


id: PBO:0082424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Biotin:apoprotein ligase; covalently modifies proteins with the addition of biotin, required for acetyl-CoA carboxylase (Acc1p) holoenzyme formation; comparative analysis suggests that a mitochondrially targeted form may result from translation starting at a non-canonical codon upstream of the annotated start codon; human homolog HLCS can complement yeast BPL1 mutant","termid":"PBO:0082424"}


id: PBO:0072172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 9","termid":"PBO:0072172"}


id: PBO:0090751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho5","termid":"PBO:0090751"}


id: GO:0046906
data:
  {"annotated_genes":["SJAG_02794","SJAG_MIT04","SJAG_03249","SJAG_05027","SJAG_02982","SJAG_02646","SJAG_02398","SJAG_04823","SJAG_03929","SJAG_04217","SJAG_02744","SJAG_03750"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112218,114362,83946,104069,112821,88355,115097,87622,84648,90767,103955,109313,111338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0020037"}]},"cv_name":"molecular_function","definition":"Binding to a tetrapyrrole, a compound containing four pyrrole nuclei variously substituted and linked to each other through carbons at the alpha position.","definition_xrefs":["GOC:curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":12,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_02794":null,"SJAG_02982":null,"SJAG_03249":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04217":null,"SJAG_04823":null,"SJAG_05027":null,"SJAG_MIT04":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tetrapyrrole binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin binding","type":"narrow"}],"termid":"GO:0046906","terms_by_termid":{"GO:0020037":null}}


id: PBO:0046728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"envoplakin","termid":"PBO:0046728"}


id: PBO:0039695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apurinic/apyrimidinic endodeoxyribonuclease 1","termid":"PBO:0039695"}


id: internal:is_a
data:
  {"annotation_feature_type":"gene","cv_name":"autocreated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_a","termid":"internal:is_a"}


id: PBO:0048374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated regulator of MAPK1 subtype 2","termid":"PBO:0048374"}


id: GO:1903513
data:
  {"annotated_genes":["SJAG_03345","SJAG_00530"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89066,85418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030970"}]},"cv_name":"biological_process","definition":"The directed movement of substances from endoplasmic reticulum to cytosol.","definition_xrefs":["GOC:rl","GOC:TermGenie","GO_REF:0000076","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:16402920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00530":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endoplasmic reticulum to cytosol transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER to cytosol transport","type":"exact"}],"termid":"GO:1903513","terms_by_termid":{"GO:0030970":null}}


id: PR:O74483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05010","PANTHER:PTHR15588:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.10","secondary_identifiers":["UniProtKB:O74483"],"synonyms":[{"name":"Spom972h-LSM8","type":"exact"}],"termid":"PR:O74483"}


id: FYPO:0006421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Fbh1 (also called Rad22) accumulates is lower than normal.","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased number of Fbh1 foci during vegetative growth","synonyms":[{"name":"decreased number of Fbh1 foci during mitotic cell cycle","type":"related"},{"name":"reduced number of Fbh1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0006421"}


id: GO:0060330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a response to type II interferon (interferon-gamma). Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"response to type II interferon","termid":"GO:0034341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to type II interferon","synonyms":[{"name":"regulation of response to gamma-interferon","type":"related"},{"name":"regulation of response to immune interferon","type":"exact"},{"name":"regulation of response to interferon-gamma","type":"broad"},{"name":"regulation of response to type II IFN","type":"exact"}],"termid":"GO:0060330"}


id: PBO:0073435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b, subunit 4 pseudogene 1","termid":"PBO:0073435"}


id: PBO:0047784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4","termid":"PBO:0047784"}


id: PBO:0000774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsd1/2 complex PHD finger containing protein Phf2","termid":"PBO:0000774"}


id: PBO:0075561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG21 abhydrolase domain containing, maspardin","termid":"PBO:0075561"}


id: PBO:0084283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for efficient mating; may participate in or regulate the low affinity Ca2+ influx system, which affects intracellular signaling and cell-cell fusion during mating","termid":"PBO:0084283"}


id: RO:HOM0000054
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Orthology that involves functional equivalent genes with retention of the ancestral function.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_orthology_relationship_with","termid":"RO:HOM0000017"},{"relation_name":"is_a","term_name":"in_equivalogy_relationship_with","termid":"RO:HOM0000062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_isoorthology_relationship_with","synonyms":[{"name":"isoorthologous to","type":"exact"}],"termid":"RO:HOM0000054"}


id: FYPO:0000427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1 to G0 transition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal G1 to G0 transition","synonyms":[{"name":"abnormal G1/G0 transition","type":"exact"},{"name":"abnormal cell cycle quiescence","type":"related"},{"name":"abnormal establishment of cell quiescence","type":"exact"}],"termid":"FYPO:0000427"}


id: PBO:0054530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1930","termid":"PBO:0054530"}


id: PBO:0084018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylated integral ER membrane protein of unknown function; forms an ER-membrane associated protein complex with Emp65p; member of the SUN-like family of proteins; genetic interactions suggest a role in folding of ER membrane proteins; required for nuclear envelope localization of Mps3p","termid":"PBO:0084018"}


id: PBO:0040115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 2","termid":"PBO:0040115"}


id: FYPO:0007585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling begins earlier than normal. Signaling may begin in interphase of the mitotic cell cycle.","definition_xrefs":["PMID:19736319","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septation initiation network signaling","termid":"FYPO:0007569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"premature septation initiation network signaling","synonyms":[{"name":"advanced septation initiation network signaling","type":"exact"},{"name":"premature SIN signaling","type":"exact"},{"name":"premature septation initiation network signaling during mitotic cell cycle","type":"related"},{"name":"premature septation initiation network signaling during vegetative growth","type":"exact"},{"name":"premature septation initiation network signalling","type":"exact"},{"name":"premature septation initiation signaling","type":"exact"}],"termid":"FYPO:0007585"}


id: PBO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.41","termid":"PBO:0002311"}


id: PBO:0074296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAFB like transcription modulator","termid":"PBO:0074296"}


id: PBO:0071934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 11","termid":"PBO:0071934"}


id: PBO:0053825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1089","termid":"PBO:0053825"}


id: PBO:0006194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulation_by","termid":"PBO:0006194"}


id: PBO:0065557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTGES2 antisense RNA 1 (head to head)","termid":"PBO:0065557"}


id: PR:000059628
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rhb1 (Schizosaccharomyces pombe) that is non-covalently bound to GDP.","definition_xrefs":["PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhb1/GTP-","pombase_gene_id":"SPBC428.16c","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein rhb1, GDP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Rhb1/GTP-","type":"exact"},{"name":"Spom-rhb1/GDP+","type":"exact"}],"termid":"PR:000059628"}


id: GO:0061007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An system process carried out by any of the organs or tissues of the hepaticobiliary system. The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepaticobiliary system process","synonyms":[{"name":"hepatobiliary system process","type":"exact"}],"termid":"GO:0061007"}


id: PBO:0073023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCP2 sterol binding domain containing 1","termid":"PBO:0073023"}


id: GO:1903048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acetylcholine-gated cation channel activity.","definition_xrefs":["GOC:TermGenie","PMID:21718690","GOC:PARL","GOC:bf","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"is_a","term_name":"regulation of postsynaptic neurotransmitter receptor activity","termid":"GO:0098962"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of acetylcholine-gated cation channel activity","termid":"GO:1903048"}


id: PBO:0028018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_CAAX-protein_geranylgeranyltransferase_activity","termid":"PBO:0028018"}


id: GO:0035811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urine volume","termid":"GO:0035809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of urine volume","synonyms":[{"name":"antidiuresis","type":"broad"},{"name":"decrease in urine flow","type":"exact"},{"name":"reduction of urinary volume","type":"exact"}],"termid":"GO:0035811"}


id: GO:1990616
data:
  {"annotated_genes":["SJAG_02484"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110736],"is_not":false,"summary":null,"term":"GO:1990616"}]},"cv_name":"biological_process","definition":"The directed movement of magnesium ions out of mitochondrial matrix into the cytosol by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:25585246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial magnesium ion transmembrane transport","termid":"GO:0045016"},{"relation_name":"is_a","term_name":"export from the mitochondrion","termid":"GO:0170037"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02484":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"magnesium ion export from mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"magnesium ion efflux from mitochondrion","type":"exact"}],"termid":"GO:1990616","terms_by_termid":{"GO:1990616":null}}


id: PBO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide mononucleotide (NMN) adenylyltransferase (predicted)","termid":"PBO:0000234"}


id: GO:1903381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902235"},{"relation_name":"regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0036483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of ER stress-induced neuron apoptosis","type":"broad"},{"name":"regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of endoplasmic reticulum stress-induced neuron apoptosis","type":"broad"},{"name":"regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1903381"}


id: GO:0018683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-camphor + putidaredoxin + O2 = (+)-exo-5-hydroxycamphor + oxidized putidaredoxin + H2O.","definition_xrefs":["EC:1.14.15.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"camphor 5-monooxygenase activity","secondary_identifiers":["MetaCyc:R541-RXN","RHEA:13525","UM-BBD_enzymeID:e0300"],"synonyms":[{"name":"(+)-camphor,reduced putidaredoxin:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"2-bornanone 5-exo-hydroxylase activity","type":"related"},{"name":"D-camphor-exo-hydroxylase activity","type":"related"},{"name":"bornanone 5-exo-hydroxylase activity","type":"related"},{"name":"camphor 5-exo-hydroxylase activity","type":"related"},{"name":"camphor 5-exo-methylene hydroxylase activity","type":"exact"},{"name":"camphor 5-exohydroxylase activity","type":"related"},{"name":"camphor hydroxylase activity","type":"related"},{"name":"camphor methylene hydroxylase activity","type":"related"},{"name":"cytochrome p450-cam activity","type":"related"},{"name":"d-camphor monooxygenase activity","type":"related"},{"name":"methylene hydroxylase activity","type":"related"},{"name":"methylene monooxygenase activity","type":"related"}],"termid":"GO:0018683"}


id: PBO:0059625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier 1","termid":"PBO:0059625"}


id: GO:2000437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of monocyte extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"monocyte extravasation","termid":"GO:0035696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monocyte extravasation","termid":"GO:2000437"}


id: PBO:0011990
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YKR022C","termid":"PBO:0011990"}


id: PBO:0108931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 18, RPL3 N3-histidine","termid":"PBO:0108931"}


id: GO:0120234
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A glycocalyx on the the endolymphatic surface of a cochlear hair cell that coats the external surface of each stereocilium and maintains a small distance between adjacent stereocilia in the bundle.","definition_xrefs":["GOC:krc","PMID:3583936","ISBN:9781461268918","PMID:31444330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium coat","synonyms":[{"name":"auditory hair cell glycocalyx","type":"broad"},{"name":"stereocilium glycocalyx","type":"exact"}],"termid":"GO:0120234"}


id: PBO:0030189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_topoisomerase_II_activity","termid":"PBO:0030189"}


id: GO:0009317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the first step in long-chain fatty acid biosynthesis. For example, in E. coli the complex is heterohexameric and composed of biotin carbonyl carrier protein, biotin carboxylase and the acetate CoA-transferase complex.","definition_xrefs":["GOC:mah","PMID:12121720","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"acetyl-CoA carboxylase complex","synonyms":[{"name":"ACCase complex","type":"exact"}],"termid":"GO:0009317"}


id: FYPO:0005886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more heat shock elements (HSEs) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription from HSE promoter","synonyms":[{"name":"expression of Hsf1 target genes increased","type":"related"},{"name":"increased transcription from HSE promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from HSE promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0005886"}


id: PBO:0082735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; required for its structural integrity and catalytic activity, involved in transcriptional silencing and required for sporulation; relocalizes to the cytosol in response to hypoxia; cells defective in SDS3 display pleiotropic phenotypes","termid":"PBO:0082735"}


id: PBO:0057607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-4","termid":"PBO:0057607"}


id: PBO:0066717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 14","termid":"PBO:0066717"}


id: PBO:0063884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class N","termid":"PBO:0063884"}


id: PBO:0089283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase Atp23","termid":"PBO:0089283"}


id: GO:0060211
data:
  {"annotated_genes":["SJAG_04427","SJAG_00686","SJAG_01436","SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94642],"is_not":false,"summary":null,"term":"GO:0060211"},{"annotations":[101011,97122,85855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA poly(A) tail shortening","termid":"GO:0000289"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_01436":null,"SJAG_04427":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA poly(A) tail shortening","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of 3' to 5' mRNA deadenylation","type":"related"},{"name":"regulation of mRNA deadenylation","type":"related"},{"name":"regulation of nuclear mRNA poly(A) tail shortening","type":"related"}],"termid":"GO:0060211","terms_by_termid":{"GO:0060211":null,"GO:0060213":null}}


id: PBO:0072410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 15","termid":"PBO:0072410"}


id: PATO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000176 metabolic function (obsolete PATO:0000176)","termid":"PATO:0000176"}


id: GO:0042031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of angiotensin-converting enzyme, thereby preventing the synthesis of angiotensin II from its precursor, angiotensin I.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete angiotensin-converting enzyme inhibitor activity (obsolete GO:0042031)","synonyms":[{"name":"ACE inhibitor","type":"exact"},{"name":"angiotensin-converting enzyme inhibitor activity","type":"exact"},{"name":"peptidyl dipeptidase A inhibitor","type":"exact"}],"termid":"GO:0042031"}


id: GO:0106144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction fraxetin+ NAD(P)H + 02= sideretin + NAD(P)(+) + H20.","definition_xrefs":["GOC:lr","PMID:29581584","RHEA:57844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fraxetin 5-hydroxylase activity","secondary_identifiers":["EC:1.14.14.164"],"termid":"GO:0106144"}


id: PBO:0066361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoverin","termid":"PBO:0066361"}


id: PBO:0030619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_maltase_activity","termid":"PBO:0030619"}


id: GO:0044561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism effects a change in the frequency, rate or extent of the activity of an ion channel in another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of molecular function in another organism","termid":"GO:0044359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of ion channel activity in another organism","synonyms":[{"name":"modulation of ion channel activity in other organism","type":"exact"},{"name":"regulation of ion channel activity in other organism","type":"exact"}],"termid":"GO:0044561"}


id: PBO:0042339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD72 molecule","termid":"PBO:0042339"}


id: PBO:0043056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin polymerizing factor 2","termid":"PBO:0043056"}


id: PBO:0079741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBXN7 antisense RNA 1","termid":"PBO:0079741"}


id: PBO:0110330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH2L pseudogene 4","termid":"PBO:0110330"}


id: PBO:0071802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulation of nuclear pre-mRNA domain containing 2","termid":"PBO:0071802"}


id: PBO:0109620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 14 pseudogene","termid":"PBO:0109620"}


id: PBO:0074905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 77","termid":"PBO:0074905"}


id: GO:0009706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the chloroplast envelope; also faces the chloroplast stroma.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid inner membrane","termid":"GO:0009528"},{"relation_name":"is_a","term_name":"chloroplast membrane","termid":"GO:0031969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast inner membrane","synonyms":[{"name":"chloroplast inner envelope","type":"exact"}],"termid":"GO:0009706"}


id: PBO:0075914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 6","termid":"PBO:0075914"}


id: PBO:0016087
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by tomato RAN2A","termid":"PBO:0016087"}


id: GO:0072227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric macula densa over time, from its formation to the mature structure. The metanephric macula densa is an area of specialized cells in the distal tubule of the metanephros that makes contact with the vascular pole of the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macula densa development","termid":"GO:0072024"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric juxtaglomerular apparatus development","termid":"GO:0072206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric macula densa development","termid":"GO:0072227"}


id: PR:P79081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diamine acetyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase ats1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.07c","secondary_identifiers":["UniProtKB:P79081"],"synonyms":[{"name":"Spom972h-SAT2","type":"exact"}],"termid":"PR:P79081"}


id: GO:0060425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the lung are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung morphogenesis","termid":"GO:0060425"}


id: PBO:0110352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4-CDC7 kinase regulatory subunit","termid":"PBO:0110352"}


id: FYPO:0006055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is normal (i.e. indistinguishable from wild type) during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle pole body","termid":"FYPO:0003541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole body during meiosis II","synonyms":[{"name":"normal protein localisation to meiotic spindle pole body during meiosis II","type":"exact"},{"name":"normal protein localization to meiotic SPB during meiosis II","type":"exact"},{"name":"normal protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006055"}


id: PBO:0046975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member B2","termid":"PBO:0046975"}


id: GO:0046690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tellurium ion stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tellurium ion","synonyms":[{"name":"response to tellurium","type":"exact"},{"name":"tellurium sensitivity/resistance","type":"related"}],"termid":"GO:0046690"}


id: GO:0103000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 4-hydroxylamino-2,6-dinitrotoluene = 4-hydroxylamino-2,6-dinitrotoluene-O-glucoside + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"UDP-glucose:4-hydroxylamino-2,6-dinitrotoluene-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9748"],"termid":"GO:0103000"}


id: PBO:0061030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninjurin 1","termid":"PBO:0061030"}


id: GO:0043912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lysine + O2 + H2O = 6-amino-2-oxohexanoate + NH3 + hydrogen peroxide.","definition_xrefs":["GOC:jl","PMID:17259313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino-acid oxidase activity","termid":"GO:0003884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-lysine oxidase activity","secondary_identifiers":["EC:1.4.3.-"],"termid":"GO:0043912"}


id: GO:0018061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a N-terminal peptidyl-phenylalanine residue by either oxidative deamination or by transamination and subsequent reduction to form peptidyl-L-3-phenyllactic acid.","definition_xrefs":["RESID:AA0128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-phenylalanine modification","termid":"GO:0018207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-3-phenyllactic acid biosynthetic process from peptidyl-phenylalanine","synonyms":[{"name":"peptidyl-L-3-phenyllactic acid anabolism from peptidyl-phenylalanine","type":"exact"},{"name":"peptidyl-L-3-phenyllactic acid formation from peptidyl-phenylalanine","type":"exact"},{"name":"peptidyl-L-3-phenyllactic acid synthesis from peptidyl-phenylalanine","type":"exact"}],"termid":"GO:0018061"}


id: PBO:0004390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR93","termid":"PBO:0004390"}


id: PBO:0082399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of succinyl-CoA ligase; succinyl-CoA ligase is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate","termid":"PBO:0082399"}


id: GO:1990078
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that inhibits multiple events of replication initiation during one replication cycle.","definition_xrefs":["GOC:bhm","PMID:21708944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"replisome","termid":"GO:0030894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"replication inhibiting complex","termid":"GO:1990078"}


id: GO:0160059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes and occurring as a result of a retinoic acid.","definition_xrefs":["PMID:17869331","PMID:9187263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"part_of","term_name":"cellular response to retinoic acid","termid":"GO:0071300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death in response to retinoic acid","synonyms":[{"name":"retinoic acid-induced apoptosis","type":"exact"}],"termid":"GO:0160059"}


id: PBO:0073479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3GL interacting endocytic adaptor 1","termid":"PBO:0073479"}


id: FYPO:0007147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which Mei2 nuclear dot formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal Mei2 nuclear dot formation","synonyms":[{"name":"normal Mei2 nuclear dot assembly","type":"exact"},{"name":"normal meiRNA nuclear dot formation","type":"related"}],"termid":"FYPO:0007147"}


id: PBO:0081855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger family member 788, pseudogene","termid":"PBO:0081855"}


id: FYPO:0002385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002385"}


id: SO:0000674
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice site where the donor and acceptor sites differ from the canonical form.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000674 non_canonical_splice_site (obsolete SO:0000674)","synonyms":[{"name":"non canonical splice site","type":"exact"},{"name":"non-canonical splice site","type":"exact"}],"termid":"SO:0000674"}


id: PBO:0070009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1306, pseudogene","termid":"PBO:0070009"}


id: PBO:0026980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_membrane","termid":"PBO:0026980"}


id: PBO:0081395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 234","termid":"PBO:0081395"}


id: PBO:0053560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 570","termid":"PBO:0053560"}


id: MOD:00091
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to L-arginine amide.","definition_xrefs":["ChEBI:145897","PubMed:2229025","PubMed:2753890","PubMed:743209","RESID:AA0082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-arginine amide","synonyms":[{"name":"(2S)-2-amino-5-[(diaminomethylidene)amino]pentanamide","type":"exact"},{"name":"2-amino-5-carbamimidamidopentanamide","type":"exact"},{"name":"2-amino-5-guanidinopentanamide","type":"exact"},{"name":"ArgN","type":"exact"},{"name":"L-arginine amide","type":"exact"},{"name":"MOD_RES Arginine amide","type":"exact"},{"name":"amidated L-arginine","type":"exact"},{"name":"argininamide","type":"exact"}],"termid":"MOD:00091"}


id: FYPO:0002609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal at centromeric outer repeat regions. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H2A phosphorylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H2A phosphorylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H2A phosphorylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H2A phosphorylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H2A phosphorylation at pericentromeric region during vegetative growth","type":"related"},{"name":"reduced histone H2A phosphorylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002609"}


id: PBO:0002925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II light chain","termid":"PBO:0002925"}


id: GO:1903625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:2001740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of DNA catabolic process","termid":"GO:1903624"},{"relation_name":"negatively_regulates","term_name":"DNA catabolic process","termid":"GO:0006308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA catabolic process","synonyms":[{"name":"down regulation of DNA breakdown","type":"exact"},{"name":"down regulation of DNA catabolic process","type":"exact"},{"name":"down regulation of DNA catabolism","type":"exact"},{"name":"down regulation of DNA degradation","type":"exact"},{"name":"down-regulation of DNA breakdown","type":"exact"},{"name":"down-regulation of DNA catabolic process","type":"exact"},{"name":"down-regulation of DNA catabolism","type":"exact"},{"name":"down-regulation of DNA degradation","type":"exact"},{"name":"downregulation of DNA breakdown","type":"exact"},{"name":"downregulation of DNA catabolic process","type":"exact"},{"name":"downregulation of DNA catabolism","type":"exact"},{"name":"downregulation of DNA degradation","type":"exact"},{"name":"inhibition of DNA breakdown","type":"narrow"},{"name":"inhibition of DNA catabolic process","type":"narrow"},{"name":"inhibition of DNA catabolism","type":"narrow"},{"name":"inhibition of DNA degradation","type":"narrow"},{"name":"negative regulation of DNA breakdown","type":"exact"},{"name":"negative regulation of DNA catabolism","type":"exact"},{"name":"negative regulation of DNA degradation","type":"exact"}],"termid":"GO:1903625"}


id: PBO:0111794
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin","termid":"PBO:0111794"}


id: PR:O94579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11599:SF16","PRO:DNx","OMA:SCHPO04818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.06","secondary_identifiers":["UniProtKB:O94579"],"synonyms":[{"name":"Spom972h-PSMA2","type":"exact"}],"termid":"PR:O94579"}


id: GO:0001192
data:
  {"annotated_genes":["SJAG_00119"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001193"}]},"cv_name":"biological_process","definition":"Suppression of the occurrence of transcriptional errors, such as substitutions and/or insertions of nucleotides that do not correctly match the template base, during the process of transcription elongation on a DNA template.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"maintenance of transcriptional fidelity during transcription elongation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001194"],"synonyms":[{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation from bacterial-type RNA polymerase promoter","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation from bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001192","terms_by_termid":{"GO:0001193":null}}


id: GO:0046017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase I promoter during mitotic cell cycle (obsolete GO:0046017)","synonyms":[{"name":"mitotic regulation of transcription from Pol I promoter","type":"exact"},{"name":"regulation of transcription from Pol I promoter during mitosis","type":"exact"},{"name":"regulation of transcription from RNA polymerase I promoter during mitosis","type":"exact"}],"termid":"GO:0046017"}


id: PBO:0017809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transmembrane transporter Vht1","termid":"PBO:0017809"}


id: GO:0031530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for gonadotropin-releasing hormone (GnRH), a peptide hormone that is synthesized and released by the hypothalamus and is responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary.","definition_xrefs":["GOC:pr","PMID:15196882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone receptor binding","termid":"GO:0051428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"gonadotropin-releasing hormone receptor binding","synonyms":[{"name":"GnRH receptor binding","type":"exact"},{"name":"gonadotrophin-releasing hormone receptor binding","type":"exact"}],"termid":"GO:0031530"}


id: PBO:0055482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2915","termid":"PBO:0055482"}


id: GO:0062150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(+)-amorpha-4,11-diene + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = (+)-artemisinate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:32999","PMID:16458889","PMID:16612385","PMID:23246612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"amorpha-4,11-diene 12-monooxygenase activity","secondary_identifiers":["EC:1.14.14.114"],"termid":"GO:0062150"}


id: GO:0048687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of sprouting of an injured axon.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"positively_regulates","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sprouting of injured axon","synonyms":[{"name":"activation of sprouting of injured axon","type":"narrow"},{"name":"stimulation of sprouting of injured axon","type":"narrow"},{"name":"up regulation of sprouting of injured axon","type":"exact"},{"name":"up-regulation of sprouting of injured axon","type":"exact"},{"name":"upregulation of sprouting of injured axon","type":"exact"}],"termid":"GO:0048687"}


id: PBO:0113190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major mitochondrial nuclease; has RNAse and DNA endo- and exonucleolytic activities; roles in mitochondrial recombination, apoptosis and maintenance of polyploidy; involved in fragmentation of genomic DNA during PND (programmed nuclear destruction); role in preventing L-A mycovirus pathogenesis; encodes ortholog of mammalian endoG","termid":"PBO:0113190"}


id: PR:O13959
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase RBX1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-box protein pip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.18c","secondary_identifiers":["UniProtKB:O13959"],"synonyms":[{"name":"Pop-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RING-box protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RBX1","type":"exact"}],"termid":"PR:O13959"}


id: PBO:0061666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50","termid":"PBO:0061666"}


id: PBO:0049814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 6","termid":"PBO:0049814"}


id: GO:0098535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Centriole assembly in which a centriole arises de novo by a process involving an electron-dense structure known as a deuterosome, rather than by duplication of an existing centriole, and occurring as part of multi-ciliated epithelial cell differentiation.","definition_xrefs":["GOC:cilia","GOC:dos","PMID:5111878","PMID:24075808","PMID:5661997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"de novo centriole assembly","termid":"GO:0097742"},{"relation_name":"part_of","term_name":"multi-ciliated epithelial cell differentiation","termid":"GO:1903251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"de novo centriole assembly involved in multi-ciliated epithelial cell differentiation","synonyms":[{"name":"centriole amplification","type":"related"},{"name":"de novo centriole assembly","type":"broad"},{"name":"de novo centriole assembly via deuterosome","type":"exact"},{"name":"deuterosomal basal body biogenesis","type":"related"},{"name":"deuterosome pathway","type":"related"},{"name":"deuterosome-mediated centriole biogenesis","type":"related"},{"name":"multiciliation","type":"related"},{"name":"multiciliogenesis","type":"related"}],"termid":"GO:0098535"}


id: PBO:0047356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein, pseudogene","termid":"PBO:0047356"}


id: FYPO:0007081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that begins with the nucleation of microtubules from each SPB within the nucleus, and normally occurs as part of the first meiotic nuclear division, does not occur.","definition_xrefs":["PMID:31532702","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal initial meiotic spindle pole body separation in meiosis I","termid":"FYPO:0007080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abolished initial meiotic spindle pole body separation in meiosis I","synonyms":[{"name":"abolished initial meiotic spindle pole body separation in first meiotic nuclear division","type":"exact"},{"name":"abolished initial mitotic SPB separation in meiosis I","type":"exact"},{"name":"abolished meiotic spindle pole body separation during meiosis I","type":"exact"},{"name":"initial meiotic spindle pole body separation in meiosis I abolished","type":"exact"}],"termid":"FYPO:0007081"}


id: PBO:0026996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_meiosis_I","termid":"PBO:0026996"}


id: PBO:0077232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 8","termid":"PBO:0077232"}


id: GO:0042675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a compound eye cone cell, a cone-shaped cell, that focuses light in a compound eye.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye cone cell differentiation","secondary_identifiers":["GO:0042674"],"termid":"GO:0042675"}


id: GO:0000716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The identification of lesions on the actively transcribed strand of the DNA duplex as well as a small subset of lesions not recognized by the general nucleotide-excision repair pathway.","definition_xrefs":["GOC:elh","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair, DNA damage recognition","termid":"GO:0000715"},{"relation_name":"part_of","term_name":"transcription-coupled nucleotide-excision repair","termid":"GO:0006283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"transcription-coupled nucleotide-excision repair, DNA damage recognition","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage recognition","type":"related"}],"termid":"GO:0000716"}


id: GO:0015473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A porin that acts in the assembly of fimbria together with fimbrial chaperone.","definition_xrefs":["TC:1.B.11.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"fimbrial usher porin activity","termid":"GO:0015473"}


id: PBO:0057594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 924","termid":"PBO:0057594"}


id: GO:0061083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the rate, frequency, or extent of protein refolding. Protein refolding is the process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein folding","termid":"GO:1903332"},{"relation_name":"regulates","term_name":"protein refolding","termid":"GO:0042026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0008150","GO:0006457"],"is_obsolete":false,"name":"regulation of protein refolding","termid":"GO:0061083"}


id: PBO:0066018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN, member RAS oncogene family","termid":"PBO:0066018"}


id: GO:0008609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-glycerone 3-phosphate + a long-chain alcohol = 1-alkyl-glycerone 3-phosphate + a long-chain acid anion.","definition_xrefs":["EC:2.5.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"alkylglycerone-phosphate synthase activity","secondary_identifiers":["MetaCyc:ALKYLGLYCERONE-PHOSPHATE-SYNTHASE-RXN","RHEA:36171","Reactome:R-HSA-390427"],"synonyms":[{"name":"1-acyl-glycerone-3-phosphate:long-chain-alcohol O-3-phospho-2-oxopropanyltransferase activity","type":"related"},{"name":"DHAP-AT","type":"related"},{"name":"alkyl DHAP synthetase activity","type":"related"},{"name":"alkyl-DHAP","type":"related"},{"name":"alkyl-DHAP synthase activity","type":"related"},{"name":"alkyldihydroxyacetone phosphate synthetase activity","type":"related"},{"name":"alkyldihydroxyacetonephosphate synthase activity","type":"related"},{"name":"dihydroxyacetone-phosphate acyltransferase activity","type":"related"}],"termid":"GO:0008609"}


id: GO:0038104
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing at least a type II activin receptor, a type I activin receptor, and a coreceptor (EGF-CFC protein) such as Cripto or Cryptic. Nodal receptor complexes are capable of binding a nodal protein and transducing the signal into the cell.","definition_xrefs":["PMID:15062104","GOC:bf","GOC:signaling","PMID:11024047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nodal receptor complex","synonyms":[{"name":"ActRIIB.ALK4.EGF-CFC complex","type":"narrow"}],"termid":"GO:0038104"}


id: FYPO:0008047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in meiosis in which dimethylation of lysine at position 4 of histone H3 is decreased at the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K4 dimethylation  at centromere during meiosis","termid":"FYPO:0008047"}


id: PBO:0041178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 2 member A3, pseudogene","termid":"PBO:0041178"}


id: FYPO:0001483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity increases normally (i.e. as in wild type) as a result of oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"},{"relation_name":"is_a","term_name":"normal cellular response to oxidative stress","termid":"FYPO:0001485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000652","FYPO:0000654","FYPO:0000257","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity increase during cellular response to oxidative stress","synonyms":[{"name":"normal alpha,alpha-trehalase activity increase during oxidative stress response","type":"exact"},{"name":"normal increase in trehalase activity in response to oxidative stress","type":"exact"},{"name":"normal neutral trehalase activity increase during cellular response to oxidative stress","type":"exact"},{"name":"normal trehalase activity increase during cellular response to oxidative stress","type":"broad"}],"termid":"FYPO:0001483"}


id: GO:0004765
data:
  {"annotated_genes":["SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87244],"is_not":false,"summary":null,"term":"GO:0004765"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + shikimate = 3-phosphoshikimate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.71","RHEA:13121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00337":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"shikimate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SHIKIMATE-KINASE-RXN","KEGG_REACTION:R02412"],"synonyms":[{"name":"ATP:shikimate 3-phosphotransferase activity","type":"related"},{"name":"shikimate kinase (phosphorylating)","type":"related"},{"name":"shikimate kinase II","type":"related"}],"termid":"GO:0004765","terms_by_termid":{"GO:0004765":null}}


id: GO:0015806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of S-methylmethionine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"S-methylmethionine transport","termid":"GO:0015806"}


id: PBO:0002778
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cryptic Loci Regulator","termid":"PBO:0002778"}


id: PATO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of change of the bearer's angular velocity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Angular_acceleration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acceleration","termid":"PATO:0001028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angular acceleration","termid":"PATO:0001350"}


id: PBO:0071342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29","termid":"PBO:0071342"}


id: GO:0032578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an aleurone grain.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"aleurone grain","termid":"GO:0033095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"aleurone grain membrane","termid":"GO:0032578"}


id: PBO:0071114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 116","termid":"PBO:0071114"}


id: PBO:0064198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta enriched 1","termid":"PBO:0064198"}


id: PR:000027728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myo2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:15184401","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 1","synonyms":[{"name":"Myosin type II heavy chain 1","type":"exact"},{"name":"myo2","type":"exact"}],"termid":"PR:000027728"}


id: GO:0141106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a methyltransferase.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"methyltransferase regulator activity","termid":"GO:0141107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"tRNA methyltransferase activator activity","termid":"GO:0141106"}


id: PBO:0012546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 4 (predicted)","termid":"PBO:0012546"}


id: GO:0062047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-pipecolic acid + NAD(P)H + O2 + H+ = N-hydroxypipecolic acid + NAD(P)+ + H2O.","definition_xrefs":["PMID:28330936","PMID:27758894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"pipecolic acid N-hydroxylase","termid":"GO:0062047"}


id: PBO:0040956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 27","termid":"PBO:0040956"}


id: GO:0043540
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric, bifunctional enzyme complex which catalyzes the synthesis and degradation of fructose 2,6-bisphosphate, and is required for both glycolysis and gluconeogenesis.","definition_xrefs":["GOC:so","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005829","GO:0032991"],"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex","synonyms":[{"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 complex","type":"narrow"},{"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 complex","type":"narrow"},{"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 complex","type":"narrow"},{"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 complex","type":"narrow"}],"termid":"GO:0043540"}


id: PBO:0076304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 2","termid":"PBO:0076304"}


id: GO:0018652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene-4-sulfonate + NADH + O2 = NAD+ + OH- + 4-sulfobenzyl alcohol.","definition_xrefs":["RHEA:51024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"toluene-sulfonate methyl-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0290","MetaCyc:TSMOS-RXN"],"synonyms":[{"name":"toluene-sulphonate methyl-monooxygenase activity","type":"exact"}],"termid":"GO:0018652"}


id: GO:0033269
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon part that is located between the nodes of Ranvier and surrounded by compact myelin sheath.","definition_xrefs":["GOC:mh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"internode region of axon","secondary_identifiers":["NIF_Subcellular:sao206157942"],"synonyms":[{"name":"internode","type":"exact"}],"termid":"GO:0033269"}


id: PBO:0067602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 766, pseudogene","termid":"PBO:0067602"}


id: PBO:0003356
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human SRPK1","termid":"PBO:0003356"}


id: GO:0019561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylalanine under anaerobic conditions; occurs via the intermediates phenylpyruvate and phenylacetaldehyde.","definition_xrefs":["GOC:mah","MetaCyc:ANAPHENOXI-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-phenylalanine catabolic process","termid":"GO:0006559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"anaerobic phenylalanine oxidation","termid":"GO:0019561"}


id: PBO:0041185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 9","termid":"PBO:0041185"}


id: PBO:0075407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 5","termid":"PBO:0075407"}


id: PBO:0065461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD6 antisense RNA 1","termid":"PBO:0065461"}


id: GO:0102721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + 2 an ubiquinol = 2 H2O + 2 an ubiquinone.","definition_xrefs":["GOC:pz","RHEA:30255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ubiquinol:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-6883","EC:1.10.3.11"],"termid":"GO:0102721"}


id: PBO:0054385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1781","termid":"PBO:0054385"}


id: PBO:0084420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major isoform of large subunit of ribonucleotide-diphosphate reductase; the RNR complex catalyzes rate-limiting step in dNTP synthesis, regulated by DNA replication and DNA damage checkpoint pathways via localization of small subunits; relative distribution to the nucleus increases upon DNA replication stress; RNR1 has a paralog, RNR3, that arose from the whole genome duplication","termid":"PBO:0084420"}


id: PBO:0060548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)HX dehydratase","termid":"PBO:0060548"}


id: PBO:0017958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex ubiquitin-protein ligase E3 subunit Gid2/Rmd5 (predicted)","termid":"PBO:0017958"}


id: PBO:0084153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity plasma membrane H+-biotin (vitamin H) symporter; mutation results in fatty acid auxotrophy; 12 transmembrane domain containing major facilitator subfamily member; mRNA levels negatively regulated by iron deprivation and biotin","termid":"PBO:0084153"}


id: PBO:0063655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 12","termid":"PBO:0063655"}


id: PBO:0046296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMSY transcriptional repressor, BRCA2 interacting","termid":"PBO:0046296"}


id: PBO:0039898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF2 antisense RNA 2","termid":"PBO:0039898"}


id: GO:0140329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lysophospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["PMID:15661733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid translocation","termid":"GO:0045332"},{"relation_name":"is_a","term_name":"lysophospholipid transport","termid":"GO:0051977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"lysophospholipid translocation","termid":"GO:0140329"}


id: PBO:0029599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sodium:hydrogen_antiporter_activity","termid":"PBO:0029599"}


id: PBO:0043640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 3","termid":"PBO:0043640"}


id: PBO:0052054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 3","termid":"PBO:0052054"}


id: PBO:0057519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 637","termid":"PBO:0057519"}


id: PBO:0075006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-17","termid":"PBO:0075006"}


id: PBO:0039978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 1","termid":"PBO:0039978"}


id: PBO:0082831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved ribosomal protein P0 of the ribosomal stalk; involved in interaction between translational elongation factors and the ribosome; phosphorylated on serine 302; homologous to mammalian ribosomal protein LP0 and bacterial L10","termid":"PBO:0082831"}


id: PBO:0070238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 176 pseudogene","termid":"PBO:0070238"}


id: SO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An MGE that is integrated into the host chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_genetic_element","termid":"SO:0001037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrated_mobile_genetic_element","synonyms":[{"name":"integrated mobile genetic element","type":"exact"}],"termid":"SO:0001039"}


id: PBO:0046191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO domain containing 2","termid":"PBO:0046191"}


id: PBO:0013442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1101/ mitochondrial ribosomal protein Rsm22 fusion protein","termid":"PBO:0013442"}


id: PBO:0031401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_wall_during_vegetative_growth","termid":"PBO:0031401"}


id: PBO:0058749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6873","termid":"PBO:0058749"}


id: PBO:0078846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 2 (pseudogene)","termid":"PBO:0078846"}


id: GO:0050855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050854"},{"relation_name":"regulates","term_name":"B cell receptor signaling pathway","termid":"GO:0050853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of B cell receptor signaling pathway","synonyms":[{"name":"regulation of B cell receptor signalling pathway","type":"exact"},{"name":"regulation of B lymphocyte receptor signaling pathway","type":"exact"},{"name":"regulation of B lymphocyte receptor signalling pathway","type":"exact"},{"name":"regulation of B-cell receptor signaling pathway","type":"exact"},{"name":"regulation of B-cell receptor signalling pathway","type":"exact"},{"name":"regulation of B-lymphocyte receptor signaling pathway","type":"exact"},{"name":"regulation of B-lymphocyte receptor signalling pathway","type":"exact"}],"termid":"GO:0050855"}


id: GO:0070380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high mobility group box 1 (HMBGB1) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","PMID:18431461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"high mobility group box 1 receptor activity","synonyms":[{"name":"HMGB1 receptor activity","type":"exact"}],"termid":"GO:0070380"}


id: PATO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000699 glutinous (obsolete PATO:0000699)","termid":"PATO:0000699"}


id: GO:0036182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving asperthecin, an anthraquinone pigment obtained from the mould Aspergillus nidulans.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"asperthecin metabolic process","synonyms":[{"name":"asperthecin metabolism","type":"exact"}],"termid":"GO:0036182"}


id: PBO:0041889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catsper channel auxiliary subunit epsilon","termid":"PBO:0041889"}


id: GO:0030585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + oxaloacetate = CO2 + phosphate + phosphoenolpyruvate.","definition_xrefs":["EC:4.1.1.38","RHEA:22356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate carboxykinase activity","termid":"GO:0004611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase (diphosphate) activity","secondary_identifiers":["KEGG_REACTION:R00346","MetaCyc:4.1.1.38-RXN"],"synonyms":[{"name":"PEP carboxyphosphotransferase activity","type":"related"},{"name":"PEPCTrP","type":"related"},{"name":"diphosphate:oxaloacetate carboxy-lyase (transphosphorylating)","type":"related"},{"name":"diphosphate:oxaloacetate carboxy-lyase (transphosphorylating; phosphoenolpyruvate-forming)","type":"related"},{"name":"phosphoenolpyruvate carboxykinase (pyrophosphate) activity","type":"related"},{"name":"phosphoenolpyruvate carboxylase (pyrophosphate)","type":"related"},{"name":"phosphoenolpyruvate carboxyphosphotransferase activity","type":"related"},{"name":"phosphoenolpyruvate carboxytransphosphorylase activity","type":"related"},{"name":"phosphoenolpyruvic carboxykinase","type":"broad"},{"name":"phosphoenolpyruvic carboxykinase (pyrophosphate)","type":"related"},{"name":"phosphoenolpyruvic carboxylase (pyrophosphate)","type":"related"},{"name":"phosphoenolpyruvic carboxytransphosphorylase activity","type":"related"},{"name":"phosphopyruvate carboxykinase","type":"broad"},{"name":"phosphopyruvate carboxykinase (pyrophosphate)","type":"related"},{"name":"phosphopyruvate carboxylase (pyrophosphate)","type":"related"}],"termid":"GO:0030585"}


id: PBO:0042422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 6","termid":"PBO:0042422"}


id: FYPO:0005898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is increased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during mitotic G1 phase","termid":"FYPO:0005897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to centromeric chromatin during mitotic G1 phase","synonyms":[{"name":"increased protein localisation to centromeric chromatin during mitotic G1 phase","type":"exact"},{"name":"increased protein localization to centromeric chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"increased protein localization to centromeric chromatin during G1 phase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0005898"}


id: PBO:0041058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 9","termid":"PBO:0041058"}


id: GO:0031134
data:
  {"annotated_genes":["SJAG_03543","SJAG_02731","SJAG_04140","SJAG_02814","SJAG_04076","SJAG_01211","SJAG_00918","SJAG_03437","SJAG_01224","SJAG_01371","SJAG_01297","SJAG_04623","SJAG_01805","SJAG_02336","SJAG_01837","SJAG_01601","SJAG_00302","SJAG_00335","SJAG_03048","SJAG_04412","SJAG_00082","SJAG_05266","SJAG_01775","SJAG_05220","SJAG_01082","SJAG_03989","SJAG_00930","SJAG_05319","SJAG_00678","SJAG_04259","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105256],"is_not":false,"summary":null,"term":"GO:0031134"},{"annotations":[108726,110604,98135,98134,108727,95249,96635,94750,90328,98133,103611,85300,99666,106003,114762,100017,87122,104367,85903,108728,85518,94751,110204,104994,89959,113016,109898,109344,98559,112777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990758"},{"annotations":[89933,107308,112786,86154,98503],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"The cell cycle process in which sister chromatids establish stable attachments to microtubules emanating from opposite spindle poles.","definition_xrefs":["PMID:15309047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"part_of","term_name":"sister chromatid segregation","termid":"GO:0000819"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01601":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03437":null,"SJAG_03543":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04623":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"sister chromatid biorientation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome biorientation","type":"exact"},{"name":"sister kinetochore biorientation","type":"exact"}],"termid":"GO:0031134","terms_by_termid":{"GO:0031134":null,"GO:0140429":null,"GO:1990758":null}}


id: GO:1990332
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type-I transmembrane protein complex located in the endoplasmic reticulum (ER) consisting of an IRE1-IRE1 dimer, which forms in response to the accumulation of unfolded protein in the ER. The dimeric complex has endoribonuclease (RNase) activity and evokes the unfolded protein response (UPR) by cleaving an intron of a mRNA coding for the transcription factor HAC1 in yeast or XBP1 in mammals; the complex cleaves a single phosphodiester bond in each of two RNA hairpins (with non-specific base paired stems and loops of consensus sequence CNCNNGN, where N is any base) to remove an intervening intron from the target transcript.","definition_xrefs":["PMID:25437541","GOC:bf","GOC:bhm","PMID:18191223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"},{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005783","GO:0005789","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Ire1 complex","synonyms":[{"name":"ER-bound kinase/endoribonuclease (RNase), inositol-requiring enzyme-1","type":"exact"},{"name":"ERN1 complex","type":"related"},{"name":"IRE1 dimer","type":"exact"},{"name":"Ire1 complex dimer","type":"exact"},{"name":"Ire1 complex homodimer","type":"exact"},{"name":"Ire1 complex homooligomer","type":"exact"}],"termid":"GO:1990332"}


id: PBO:0058438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5002","termid":"PBO:0058438"}


id: PBO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.11","termid":"PBO:0001930"}


id: GO:0043335
data:
  {"annotated_genes":["SJAG_02825","SJAG_04187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100329,106945],"is_not":false,"summary":null,"term":"GO:0043335"}]},"cv_name":"biological_process","definition":"The process of assisting in the disassembly of non-covalent linkages in a protein or protein aggregate, often where the proteins are in a non-functional or denatured state.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02825":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein unfolding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043335","terms_by_termid":{"GO:0043335":null}}


id: PBO:0078068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 58 (non-functional)","termid":"PBO:0078068"}


id: PBO:0005628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-Mg/Pi carrier (predicted)","termid":"PBO:0005628"}


id: MOD:00240
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4-hydroxy-L-lysine.","definition_xrefs":["RESID:AA0235","ChEBI:141495","PubMed:4005040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated lysine","termid":"MOD:01047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-L-lysine","synonyms":[{"name":"(2S,4R)-2,6-diamino-4-hydroxyhexanoic acid","type":"exact"},{"name":"4-hydroxy-L-lysine","type":"exact"},{"name":"4-hydroxylated L-lysine","type":"exact"},{"name":"4HyLys","type":"exact"},{"name":"L-threo-gamma-hydroxylysine","type":"exact"},{"name":"MOD_RES 4-hydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-gamma-hydroxycaproic acid","type":"exact"}],"termid":"MOD:00240"}


id: GO:0009103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:ai","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"lipopolysaccharide biosynthetic process","secondary_identifiers":["KEGG_PATHWAY:map00540"],"synonyms":[{"name":"LPS biosynthetic process","type":"exact"},{"name":"lipopolysaccharide anabolism","type":"exact"},{"name":"lipopolysaccharide biosynthesis","type":"exact"},{"name":"lipopolysaccharide formation","type":"exact"},{"name":"lipopolysaccharide synthesis","type":"exact"}],"termid":"GO:0009103"}


id: PBO:0085827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; gene expression increases in cultures shifted to a lower temperature; protein abundance increases in response to DNA replication stress","termid":"PBO:0085827"}


id: PBO:0051289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-39","termid":"PBO:0051289"}


id: PBO:0077823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3B","termid":"PBO:0077823"}


id: PBO:0076541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription activation suppressor","termid":"PBO:0076541"}


id: PBO:0027688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA-directed_DNA_polymerase_activity","termid":"PBO:0027688"}


id: PBO:0064489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit B","termid":"PBO:0064489"}


id: PBO:0042687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cat eye syndrome chromosome region","termid":"PBO:0042687"}


id: GO:0019037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Specific locations and structures in the virus infected cell involved in assembling new virions.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete viral assembly intermediate (obsolete GO:0019037)","termid":"GO:0019037"}


id: GO:0009827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to chemical and structural alterations of an existing cellulose and pectin-containing cell wall that can result in loosening, increased extensibility or disassembly. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:lr","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall organization","termid":"GO:0009664"},{"relation_name":"is_a","term_name":"cell wall modification","termid":"GO:0042545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"plant-type cell wall modification","synonyms":[{"name":"cellulose and pectin-containing cell wall modification","type":"exact"}],"termid":"GO:0009827"}


id: GO:0031437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mRNA cleavage, any process in which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA cleavage (obsolete GO:0031437)","termid":"GO:0031437"}


id: GO:0044193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the host cell mitochondrial envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host organelle outer membrane","termid":"GO:0039661"},{"relation_name":"is_a","term_name":"host cell mitochondrial membrane","termid":"GO:0044191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial outer membrane","termid":"GO:0044193"}


id: PBO:0026736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_upon_nitrogen_source_shift","termid":"PBO:0026736"}


id: PBO:0087588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches","termid":"PBO:0087588"}


id: PBO:0046192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO domain containing 3","termid":"PBO:0046192"}


id: PBO:0040035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 2","termid":"PBO:0040035"}


id: GO:0031259
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a uropod.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"cell trailing edge membrane","termid":"GO:0031257"},{"relation_name":"part_of","term_name":"uropod","termid":"GO:0001931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"uropod membrane","synonyms":[{"name":"uropodium membrane","type":"exact"}],"termid":"GO:0031259"}


id: PBO:0045505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin sialophosphoprotein","termid":"PBO:0045505"}


id: PATO:0002487
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a process by virtue of that process having exactly one organism as a participant.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single organismal process quality","termid":"PATO:0002487"}


id: PR:Q9Y7L0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle-trafficking protein SEC22b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7L0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.08c","synonyms":[{"name":"Spom972h-SEC22B","type":"exact"}],"termid":"PR:Q9Y7L0"}


id: GO:0033909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,2-alpha-L-fucoside linkages in fucoidan without release of sulfate.","definition_xrefs":["PMID:11910806","PMID:6417453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"fucoidanase activity","secondary_identifiers":["EC:3.2.1.211","MetaCyc:RXN-20949"],"synonyms":[{"name":"poly(1,2-alpha-L-fucoside-4-sulfate) glycanohydrolase activity","type":"related"}],"termid":"GO:0033909"}


id: FYPO:0005203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethionine. Cells stop growing (and may die) at a concentration of ethionine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to ethionine","synonyms":[{"name":"hypersensitive to ethionine","type":"exact"},{"name":"sensitive to DL-ethionine","type":"related"},{"name":"sensitive to S-ethylhomocysteine","type":"exact"},{"name":"sensitive to ethionine during mitotic cell cycle","type":"related"},{"name":"sensitive to ethionine during vegetative growth","type":"exact"}],"termid":"FYPO:0005203"}


id: GO:0050543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to icosatetraenoic acid, any straight-chain fatty acid with twenty carbon atoms and four double bonds per molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"icosatetraenoic acid binding","synonyms":[{"name":"eicosatetraenoic acid binding","type":"exact"}],"termid":"GO:0050543"}


id: GO:0004209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-6 activity (obsolete GO:0004209)","synonyms":[{"name":"caspase-6 activity","type":"exact"}],"termid":"GO:0004209"}


id: GO:0097287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.","definition_xrefs":["GOC:yaf","PMID:364423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine metabolic process","synonyms":[{"name":"7-cyano-7-deazaguanine metabolism","type":"exact"}],"termid":"GO:0097287"}


id: GO:0075507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral penetration into the host nucleus where the where a viral capsid docks on the cytoplasmic side of the nuclear pore complex (NPC) and ejects the viral genome through the pore into the nucleoplasm.","definition_xrefs":["VZ:989","PMID:22929056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral penetration into host nucleus","termid":"GO:0075732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry of viral genome into host nucleus via docking of viral capsid to the nuclear pore complex and injection of viral genome","termid":"GO:0075507"}


id: GO:0048243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of norepinephrine by a cell. Norepinephrine is a catecholamine and it acts as a hormone and as a neurotransmitter of most of the sympathetic nervous system.","definition_xrefs":["GOC:jid","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine transport","termid":"GO:0015874"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"is_a","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"norepinephrine secretion","synonyms":[{"name":"noradrenaline secretion","type":"exact"}],"termid":"GO:0048243"}


id: GO:0003216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a left cardiac atrium from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac atrium formation","termid":"GO:0003210"},{"relation_name":"part_of","term_name":"cardiac left atrium morphogenesis","termid":"GO:0003212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left atrium formation","termid":"GO:0003216"}


id: FYPO:0002960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during the meiotic cell cycle, and that contain determinant of selective removal (DSR) sequences, measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah","PMID:23980030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased level of DSR-containing meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased DSR-containing meiotic gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of DSR-containing meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of DSR-containing meiotic cell cycle gene mRNA during vegetative growth","type":"related"},{"name":"increased level of DSR-containing meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of DSR-containing meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of DSR-containing meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of DSR-containing meiotic nuclear division gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0002960"}


id: GO:0042621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(3-hydroxyalkanoates), polyesters of 3-hydroxyacids produced as intracellular granules by a large variety of bacteria.","definition_xrefs":["GOC:jl","PMID:9925580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"poly(3-hydroxyalkanoate) metabolic process","termid":"GO:0042620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(3-hydroxyalkanoate) biosynthetic process","synonyms":[{"name":"PHA biosynthesis","type":"broad"},{"name":"PHA biosynthetic process","type":"broad"},{"name":"poly(3-hydroxyalkanoate) anabolism","type":"exact"},{"name":"poly(3-hydroxyalkanoate) biosynthesis","type":"exact"},{"name":"poly(3-hydroxyalkanoate) formation","type":"exact"},{"name":"poly(3-hydroxyalkanoate) synthesis","type":"exact"}],"termid":"GO:0042621"}


id: PBO:0044427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 54, pseudogene","termid":"PBO:0044427"}


id: PBO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spo12 family protein","termid":"PBO:0001767"}


id: FYPO:0001025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic cell cycle progression is arrested under conditions where arrest normally occurs.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle arrest phenotype","termid":"FYPO:0004040"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"normally arrested mitotic cell cycle progression","synonyms":[{"name":"normal mitotic cell cycle arrest","type":"exact"}],"termid":"FYPO:0001025"}


id: PBO:0025418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluoride channel Fex1","termid":"PBO:0025418"}


id: FYPO:0006613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II occurs to a lower extent than normal. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["PomBase:mah","GO:0006369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"},{"relation_name":"is_a","term_name":"abnormal termination of RNA polymerase II transcription","termid":"FYPO:0004811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"decreased termination of RNA polymerase II transcription","synonyms":[{"name":"decreased RNA polymerase II transcription termination","type":"exact"},{"name":"decreased termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"decreased termination of RNA polymerase II transcription during vegetative growth","type":"exact"},{"name":"reduced termination of RNA polymerase II transcription","type":"exact"}],"termid":"FYPO:0006613"}


id: PBO:0063187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated 3","termid":"PBO:0063187"}


id: FYECO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tunicamycin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tunicamycin","synonyms":[{"name":"tunicamycin added","type":"exact"}],"termid":"FYECO:0000412"}


id: GO:0010544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"negative regulation of blood coagulation","termid":"GO:0030195"},{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"negatively_regulates","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet activation","termid":"GO:0010544"}


id: PBO:0085219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase that acts on transmembrane proteins; including the SNAREs Snc1p, Syn8p, Tlg1p and likely all SNAREs; contains an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain; may have a role in vacuole fusion","termid":"PBO:0085219"}


id: PBO:0059373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 6","termid":"PBO:0059373"}


id: GO:0043620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from a DNA template as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:txnOH","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-templated transcription in response to stress (obsolete GO:0043620)","synonyms":[{"name":"regulation of DNA-dependent transcription in response to stress","type":"exact"}],"termid":"GO:0043620"}


id: PBO:0003368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial D-lactate dehydrogenase, cytochrome (predicted)","termid":"PBO:0003368"}


id: GO:0036339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a lymphocyte to an endothelial cell of a high endothelial venule (HEV) via adhesion molecules. A HEV cell is an endothelial cell that is cuboidal, expresses leukocyte-specific receptors, and allows for passage of lymphocytes into bloodstream.","definition_xrefs":["PMID:19339990","PMID:7679710","CL:0002652","Wikipedia:High_endothelial_venules","CL:0000542","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"lymphocyte adhesion to endothelial cell of high endothelial venule","synonyms":[{"name":"lymphocyte adhesion to HEV cell","type":"exact"},{"name":"lymphocyte adhesion to high endothelial venule","type":"exact"}],"termid":"GO:0036339"}


id: GO:0003046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intrinsic circulatory process resulting from stress relaxation that modulates the force with which blood travels through the systemic arterial circulatory system. Stress relaxation is the adaptation of vessels to a new size as a result of changes in pressure in storage areas such as veins, the liver, the spleen, and the lungs.","definition_xrefs":["GOC:mtg_cardio","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by physical factors","termid":"GO:0003045"},{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by stress relaxation","synonyms":[{"name":"blood pressure regulation by stress relaxation","type":"exact"}],"termid":"GO:0003046"}


id: FYPO:0003970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and partially separated DNA masses are connected by one or more bridges formed of chromatin.","definition_xrefs":["PomBase:mah","PMID:12455694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000337","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge","synonyms":[{"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge, during vegetative growth","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with chromatin bridge","type":"related"},{"name":"incomplete sister chromatid segregation, with chromatin bridge during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003970"}


id: PBO:0071712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 10","termid":"PBO:0071712"}


id: PBO:0004019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase catalytic subunit Bgs1","termid":"PBO:0004019"}


id: GO:1904807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein oxidation.","definition_xrefs":["PMID:22719267","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein oxidation","termid":"GO:1904806"},{"relation_name":"negatively_regulates","term_name":"protein oxidation","termid":"GO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein oxidation","synonyms":[{"name":"down regulation of protein amino acid oxidation","type":"exact"},{"name":"down regulation of protein oxidation","type":"exact"},{"name":"down-regulation of protein amino acid oxidation","type":"exact"},{"name":"down-regulation of protein oxidation","type":"exact"},{"name":"downregulation of protein amino acid oxidation","type":"exact"},{"name":"downregulation of protein oxidation","type":"exact"},{"name":"inhibition of protein amino acid oxidation","type":"narrow"},{"name":"inhibition of protein oxidation","type":"narrow"},{"name":"negative regulation of protein amino acid oxidation","type":"exact"}],"termid":"GO:1904807"}


id: PBO:0070156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 70 pseudogene","termid":"PBO:0070156"}


id: GO:0015608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carbohydrate(out) -> ADP + phosphate + carbohydrate(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"carbohydrate-importing ABC transporter activity","secondary_identifiers":["TC:3.A.1.1.1"],"synonyms":[{"name":"carbohydrate uptake transporter activity","type":"exact"},{"name":"carbohydrate-importing ATPase activity","type":"broad"},{"name":"sugar transporter","type":"narrow"}],"termid":"GO:0015608"}


id: PBO:0063569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase D","termid":"PBO:0063569"}


id: GO:0120309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the lateral attachment of the cilium to the cell body via the flagellar attachment zone in some trypanosomatid species.","definition_xrefs":["GOC:ach","PMID:22623724","PMID:11877446","PMID:18820079","PMID:26272611","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"cilium organization","termid":"GO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium attachment to cell body","synonyms":[{"name":"cilial attachment to cell body","type":"exact"},{"name":"ciliary attachment to cell body","type":"exact"},{"name":"flagellar attachment to cell body","type":"exact"},{"name":"flagellum attachment to cell body","type":"exact"}],"termid":"GO:0120309"}


id: GO:0097719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of neural tissue following its loss or destruction.","definition_xrefs":["Wikipedia:Neuroregeneration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural tissue regeneration","synonyms":[{"name":"neuroregeneration","type":"related"}],"termid":"GO:0097719"}


id: GO:0006809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitric oxide biosynthetic process","synonyms":[{"name":"nitric oxide anabolism","type":"exact"},{"name":"nitric oxide biosynthesis","type":"exact"},{"name":"nitric oxide formation","type":"exact"},{"name":"nitric oxide synthesis","type":"exact"}],"termid":"GO:0006809"}


id: PBO:0039289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG3 pseudogene 1","termid":"PBO:0039289"}


id: GO:0004771
data:
  {"annotated_genes":["SJAG_00158","SJAG_02068","SJAG_04790"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99479,100114,111179],"is_not":false,"summary":null,"term":"GO:0004771"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a steryl ester + H2O = a sterol + a fatty acid.","definition_xrefs":["EC:3.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"sterol esterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:STEROL-ESTERASE-RXN","Reactome:R-HSA-192417","Reactome:R-HSA-6813720","Reactome:R-HSA-8865667","RHEA:10100"],"synonyms":[{"name":"acylcholesterol lipase activity","type":"related"},{"name":"cholesterase activity","type":"related"},{"name":"cholesterol ester hydrolase activity","type":"related"},{"name":"cholesterol ester synthase activity","type":"narrow"},{"name":"cholesterol esterase activity","type":"narrow"},{"name":"cholesteryl ester hydrolase activity","type":"related"},{"name":"cholesteryl ester synthase activity","type":"related"},{"name":"cholesteryl esterase activity","type":"related"},{"name":"sterol ester hydrolase activity","type":"related"},{"name":"steryl-ester acylhydrolase activity","type":"related"},{"name":"triterpenol esterase activity","type":"related"}],"termid":"GO:0004771","terms_by_termid":{"GO:0004771":null}}


id: PR:Q9P794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp103 gene.","definition_xrefs":["UniProtKB:Q9P794","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 small nuclear ribonucleoprotein C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.09","synonyms":[{"name":"Spom972h-usp103","type":"exact"},{"name":"U1 snRNP C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U1-C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U1C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P794"}


id: MOD:02071
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-methionine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-methionine residue","termid":"MOD:02071"}


id: GO:0042174
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"is_a","term_name":"negative regulation of sporulation","termid":"GO:0043939"},{"relation_name":"negatively_regulates","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sporulation","type":"exact"},{"name":"down-regulation of sporulation","type":"exact"},{"name":"downregulation of sporulation","type":"exact"},{"name":"inhibition of sporulation","type":"narrow"}],"termid":"GO:0042174","terms_by_termid":{"GO:0075297":null}}


id: GO:1990709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic active zone.","definition_xrefs":["GOC:pr","PMID:17068967","PMID:16865347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"presynaptic active zone organization","synonyms":[{"name":"presynaptic active zone organisation","type":"exact"}],"termid":"GO:1990709"}


id: GO:1900674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of olefin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefin biosynthetic process","synonyms":[{"name":"olefin anabolism","type":"exact"},{"name":"olefin biosynthesis","type":"exact"},{"name":"olefin formation","type":"exact"},{"name":"olefin synthesis","type":"exact"}],"termid":"GO:1900674"}


id: GO:0061864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of molecules that form the basement membrane, including carbohydrates and glycoproteins by a cell.","definition_xrefs":["PMID:26610918","PMID:28228250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix constituent secretion","termid":"GO:0070278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"basement membrane constituent secretion","termid":"GO:0061864"}


id: GO:0120146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to sulfatide, also known as 3-O-sulfogalactosylceramide, SM4, or sulfated galactocerebroside. Sulfatide is a class of sulfoglycolipid, which are glycolipids that contain a sulfate group.","definition_xrefs":["PMID:23574804","PMID:22619219","PMID:22977233","PMID:29497057","PMID:21525289","PMID:3549017","GOC:krc","Wikipedia:Sulfatide"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid binding","termid":"GO:0051861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"sulfatide binding","synonyms":[{"name":"3-O-sulfogalactosylceramide binding","type":"exact"},{"name":"SM4 binding","type":"exact"},{"name":"sulfated galactocerebroside binding","type":"exact"}],"termid":"GO:0120146"}


id: PBO:0054106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1471","termid":"PBO:0054106"}


id: PBO:0058341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4714","termid":"PBO:0058341"}


id: MOD:01927
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-glycosyltyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-glycosyl-L-tyrosine","synonyms":[{"name":"OGlycoTyr","type":"exact"}],"termid":"MOD:01927"}


id: PBO:0043329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 4","termid":"PBO:0043329"}


id: GO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of neutrophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of neutrophil degranulation","termid":"GO:0043313"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"neutrophil degranulation","termid":"GO:0043312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of neutrophil degranulation","synonyms":[{"name":"down regulation of neutrophil degranulation","type":"exact"},{"name":"down-regulation of neutrophil degranulation","type":"exact"},{"name":"downregulation of neutrophil degranulation","type":"exact"},{"name":"inhibition of neutrophil degranulation","type":"narrow"},{"name":"negative regulation of neutrophil granule exocytosis","type":"exact"}],"termid":"GO:0043314"}


id: PBO:0081028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 10","termid":"PBO:0081028"}


id: GO:0019615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol via the ortho-cleavage pathway, in which the catechol aromatic ring is broken between the two carbon atoms bearing hydroxyl groups.","definition_xrefs":["GOC:jl","PMID:7765833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"beta-ketoadipate pathway","termid":"GO:0042952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol catabolic process, ortho-cleavage","secondary_identifiers":["MetaCyc:CATECHOL-ORTHO-CLEAVAGE-PWY"],"synonyms":[{"name":"catechol breakdown, ortho-cleavage","type":"exact"},{"name":"catechol degradation, ortho-cleavage","type":"exact"}],"termid":"GO:0019615"}


id: PBO:0074122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC30A6 divergent transcript","termid":"PBO:0074122"}


id: PBO:0042485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 10","termid":"PBO:0042485"}


id: GO:0010789
data:
  {"annotated_genes":["SJAG_03698","SJAG_03926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103933,113158],"is_not":false,"summary":null,"term":"GO:0010789"}]},"cv_name":"biological_process","definition":"The cell cycle process in which sister chromatids of a replicated chromosome are joined along the entire length of the chromosome during meiosis I.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03698":null,"SJAG_03926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic sister chromatid cohesion involved in meiosis I","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010789","terms_by_termid":{"GO:0010789":null}}


id: PBO:0028243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_glycosylated_protein_in_cell","termid":"PBO:0028243"}


id: FYPO:0003930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to salt stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during cellular response to salt stress","synonyms":[{"name":"decreased protein accumulation during cellular response to salt stress","type":"related"},{"name":"decreased protein level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003930"}


id: PBO:0052044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 1","termid":"PBO:0052044"}


id: PBO:0110031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 3","termid":"PBO:0110031"}


id: PBO:0062281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 1 pseudogene","termid":"PBO:0062281"}


id: PR:O74983
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 variant 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme spm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.05c","secondary_identifiers":["UniProtKB:O74983"],"synonyms":[{"name":"Spom972h-UBE2V1","type":"exact"},{"name":"UEV MMS2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-conjugating enzyme variant MMS2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74983"}


id: PBO:0029041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septation_index_in_stationary_phase","termid":"PBO:0029041"}


id: PBO:0004165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron transporter Str1","termid":"PBO:0004165"}


id: GO:0033025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"regulates","term_name":"mast cell apoptotic process","termid":"GO:0033024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell apoptotic process","synonyms":[{"name":"regulation of mast cell apoptosis","type":"narrow"}],"termid":"GO:0033025"}


id: PBO:0074028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 16","termid":"PBO:0074028"}


id: PBO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor Spt5","termid":"PBO:0000754"}


id: GO:0015704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cyanate, NCO-, the anion of cyanic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"one-carbon compound transport","termid":"GO:0019755"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cyanate transport","termid":"GO:0015704"}


id: GO:0051694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a protein or protein complex to the pointed (or minus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.","definition_xrefs":["ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament capping","termid":"GO:0051693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0030036","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"pointed-end actin filament capping","synonyms":[{"name":"minus-end F-actin capping activity","type":"exact"},{"name":"minus-end actin filament capping activity","type":"exact"},{"name":"pointed-end F-actin capping activity","type":"exact"},{"name":"pointed-end actin capping activity","type":"exact"}],"termid":"GO:0051694"}


id: PBO:0056735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 4","termid":"PBO:0056735"}


id: GO:0006518
data:
  {"annotated_genes":["SJAG_00792","SJAG_01430","SJAG_04032","SJAG_01088","SJAG_00181","SJAG_02809","SJAG_03494","SJAG_02599","SJAG_03737","SJAG_01351","SJAG_04031","SJAG_00469","SJAG_02867","SJAG_01004","SJAG_04583","SJAG_01179","SJAG_00988","SJAG_01750","SJAG_03648","SJAG_03261","SJAG_03121"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88429],"is_not":false,"summary":null,"term":"GO:0006518"},{"annotations":[90231],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043041"},{"annotations":[90233,90241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[93149,89425,114250,104540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[90189],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[110555,97160,101856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043171"},{"annotations":[101494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019290"},{"annotations":[105304,90849,94550,99938,83822,99193,107102,108669,104185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006465"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01004":null,"SJAG_01088":null,"SJAG_01179":null,"SJAG_01351":null,"SJAG_01430":null,"SJAG_01750":null,"SJAG_02599":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_03121":null,"SJAG_03261":null,"SJAG_03494":null,"SJAG_03648":null,"SJAG_03737":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peptide metabolism","type":"exact"}],"termid":"GO:0006518","terms_by_termid":{"GO:0006465":null,"GO:0006518":null,"GO:0006750":null,"GO:0019290":null,"GO:0031169":null,"GO:0043041":null,"GO:0043171":null,"GO:1905569":null}}


id: GO:0005173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a stem cell factor receptor (SCFR), a type III transmembrane kinase receptor.","definition_xrefs":["GOC:jl","PMID:10698217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"stem cell factor receptor binding","synonyms":[{"name":"KIT binding","type":"narrow"},{"name":"SCF","type":"narrow"},{"name":"SCFR binding","type":"exact"},{"name":"stem cell factor","type":"narrow"},{"name":"stem cell factor receptor ligand","type":"narrow"}],"termid":"GO:0005173"}


id: PBO:0013093
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Replication Uncoupled from Mitosis","termid":"PBO:0013093"}


id: GO:0006728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pteridine, pyrazino(2,3-dipyrimidine), the parent structure of pterins and the pteroyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine metabolic process","termid":"GO:0019889"},{"relation_name":"is_a","term_name":"pteridine-containing compound biosynthetic process","termid":"GO:0042559"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042559"],"is_obsolete":false,"name":"pteridine biosynthetic process","synonyms":[{"name":"pteridine anabolism","type":"exact"},{"name":"pteridine biosynthesis","type":"exact"},{"name":"pteridine formation","type":"exact"},{"name":"pteridine synthesis","type":"exact"},{"name":"pterin biosynthesis","type":"narrow"},{"name":"pterin biosynthetic process","type":"narrow"}],"termid":"GO:0006728"}


id: GO:0000515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + L-aspartate(in) + L-glutamate(out) = H+(in) + L-aspartate(out) + L-glutamate(in).","definition_xrefs":["PMID:11566871","RHEA:70783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"aspartate:glutamate, proton antiporter activity","termid":"GO:0000515"}


id: PBO:0030976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_methylation","termid":"PBO:0030976"}


id: GO:0030712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of border follicle cell delamination","termid":"GO:0030710"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of border follicle cell delamination","synonyms":[{"name":"down regulation of border follicle cell delamination","type":"exact"},{"name":"down-regulation of border follicle cell delamination","type":"exact"},{"name":"downregulation of border follicle cell delamination","type":"exact"},{"name":"inhibition of border follicle cell delamination","type":"narrow"},{"name":"negative regulation of border cell delamination","type":"broad"}],"termid":"GO:0030712"}


id: PBO:0042271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 7","termid":"PBO:0042271"}


id: PBO:0077723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing adaptor 6A","termid":"PBO:0077723"}


id: PBO:0039764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alu-mediated CDKN1A/p21 transcriptional regulator","termid":"PBO:0039764"}


id: PBO:0041233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 56","termid":"PBO:0041233"}


id: PR:Q10487
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs1 gene.","definition_xrefs":["UniProtKB:Q10487","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter mfs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.16c","synonyms":[{"name":"Spom972h-mfs1","type":"exact"}],"termid":"PR:Q10487"}


id: GO:0030410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 S-adenosyl-L-methionine(1+) = 3 S-methyl-5'-thioadenosine + 3 H+ + nicotianamine.","definition_xrefs":["EC:2.5.1.43","RHEA:16481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"nicotianamine synthase activity","secondary_identifiers":["MetaCyc:2.5.1.43-RXN","KEGG_REACTION:R00075"],"synonyms":[{"name":"S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-L-methionine 3-amino-3-carboxypropyltransferase activity","type":"related"}],"termid":"GO:0030410"}


id: PBO:0070099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 13 pseudogene","termid":"PBO:0070099"}


id: PBO:0016879
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat expansion SQRSQRS","termid":"PBO:0016879"}


id: GO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"M phase","secondary_identifiers":["Wikipedia:M_phase"],"synonyms":[{"name":"M-phase","type":"exact"}],"termid":"GO:0000279"}


id: PBO:0054471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1871","termid":"PBO:0054471"}


id: RO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of intracellular endoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"has_endoparasite","termid":"RO:0002635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intracellular_endoparasite","termid":"RO:0002641"}


id: PATO:0000653
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000653 addictive substance value (obsolete PATO:0000653)","termid":"PATO:0000653"}


id: PBO:0042205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin H pseudogene 1","termid":"PBO:0042205"}


id: GO:0009458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A hemeprotein whose characteristic mode of action involves transfer of reducing equivalents associated with a reversible change in oxidation state of the prosthetic group. This redox change involves a single electron, reversible equilibrium between the Fe(II) and Fe(III) states of the central iron atom.","definition_xrefs":["PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome (obsolete GO:0009458)","synonyms":[{"name":"cytochrome","type":"exact"}],"termid":"GO:0009458"}


id: FYPO:0006135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of citrate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular citrate level","synonyms":[{"name":"increased cellular citrate anion level","type":"exact"},{"name":"increased cellular citrate level during mitotic cell cycle","type":"related"},{"name":"increased cellular citrate level during vegetative growth","type":"exact"},{"name":"increased citrate accumulation","type":"related"}],"termid":"FYPO:0006135"}


id: GO:0000006
data:
  {"annotated_genes":["SJAG_04185"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100294],"is_not":false,"summary":null,"term":"GO:0000006"}]},"cv_name":"molecular_function","definition":"Enables the transfer of zinc ions (Zn2+) from one side of a membrane to the other, probably powered by proton motive force. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["TC:2.A.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"high-affinity zinc transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high affinity zinc uptake transmembrane transporter activity","type":"exact"},{"name":"high-affinity zinc uptake transmembrane transporter activity","type":"related"}],"termid":"GO:0000006","terms_by_termid":{"GO:0000006":null}}


id: PBO:0046841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 14","termid":"PBO:0046841"}


id: GO:0051265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diolein + mono-olein = triolein + glycerol. Mono-olein, also known as mono-oleoylglycerol, is the monoglyceride formed from oleic acid, 9-octodecenoic acid; diolein is also known as dioleoylglycerol, and triolein as trioleoylglycerol and olein.","definition_xrefs":["GOC:ai","PMID:15364929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"diolein transacylation activity","synonyms":[{"name":"DOG transacylation","type":"exact"},{"name":"acyl-CoA-independent diolein transacylation","type":"exact"},{"name":"dioleoylglycerol O-acyltransferase activity","type":"exact"},{"name":"dioleoylglycerol transacylase activity","type":"exact"}],"termid":"GO:0051265"}


id: PBO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha catalytic subunit","termid":"PBO:0002046"}


id: PBO:0070033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1330, pseudogene","termid":"PBO:0070033"}


id: GO:0015482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete voltage-gated anion channel porin activity (obsolete GO:0015482)","synonyms":[{"name":"voltage-dependent anion channel porin activity","type":"exact"},{"name":"voltage-gated anion channel porin activity","type":"exact"}],"termid":"GO:0015482"}


id: GO:0048326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axial mesodermal cell fate determination","termid":"GO:0048324"},{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate determination","termid":"GO:0048336"},{"relation_name":"positively_regulates","term_name":"axial mesodermal cell fate determination","termid":"GO:0048323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axial mesodermal cell fate determination","synonyms":[{"name":"activation of axial mesodermal cell fate determination","type":"narrow"},{"name":"stimulation of axial mesodermal cell fate determination","type":"narrow"},{"name":"up regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"up-regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"upregulation of axial mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048326"}


id: PBO:0063502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoinositide dependent protein kinase 1","termid":"PBO:0063502"}


id: FYPO:0005891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a nuclease activity is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased nuclease activity during nitrogen starvation","synonyms":[{"name":"decreased nuclease activity during nitrogen depletion","type":"exact"},{"name":"decreased nuclease activity during nitrogen deprivation","type":"exact"},{"name":"reduced nuclease activity during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005891"}


id: PBO:0005711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dpy-30 domain protein Sdc1","termid":"PBO:0005711"}


id: GO:0071855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide receptor.","definition_xrefs":["GOC:kmv","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neuropeptide receptor binding","termid":"GO:0071855"}


id: GO:0033167
data:
  {"annotated_genes":["SJAG_04061","SJAG_02594","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84941,84996,114155],"is_not":false,"summary":null,"term":"GO:0033167"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains members of the Argonaute family of proteins, additional protein subunits, and duplex siRNA; required for heterochromatin assembly and siRNA generation. Possibly involved in the conversion of ds siRNA to ss siRNA.","definition_xrefs":["PMID:17310250","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi effector complex","termid":"GO:0031332"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02594":null,"SJAG_02621":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"ARC complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"argonaute siRNA chaperone complex","type":"exact"}],"termid":"GO:0033167","terms_by_termid":{"GO:0033167":null}}


id: PBO:0110363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 3 (MAM blood group)","termid":"PBO:0110363"}


id: PBO:0075232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 5 pseudogene 2","termid":"PBO:0075232"}


id: PBO:0072775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A4, constitutive","termid":"PBO:0072775"}


id: PBO:0027943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_spindle","termid":"PBO:0027943"}


id: PBO:0073439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm like with four mbt domains 1","termid":"PBO:0073439"}


id: PBO:0072656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 8C","termid":"PBO:0072656"}


id: FYPO:0000481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic recombination is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"abnormal mitotic recombination","synonyms":[{"name":"abnormal mitotic recombination during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: abnormal","type":"related"}],"termid":"FYPO:0000481"}


id: PBO:0040082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase D","termid":"PBO:0040082"}


id: GO:1904625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycine secretion, neurotransmission.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22988142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission, glycinergic","termid":"GO:0060093"},{"relation_name":"is_a","term_name":"regulation of glycine secretion, neurotransmission","termid":"GO:1904624"},{"relation_name":"negatively_regulates","term_name":"glycine secretion, neurotransmission","termid":"GO:0061537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of glycine secretion, neurotransmission","synonyms":[{"name":"down regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"down-regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"downregulation of glycine secretion, neurotransmission","type":"exact"},{"name":"inhibition of glycine secretion, neurotransmission","type":"narrow"}],"termid":"GO:1904625"}


id: GO:0010942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cell death (obsolete GO:0010942)","termid":"GO:0010942"}


id: PBO:0002742
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure","termid":"PBO:0002742"}


id: PBO:0001299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom22 (predicted)","termid":"PBO:0001299"}


id: FYPO:0001166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing fructose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on fructose carbon source","synonyms":[{"name":"normal cell population growth on fructose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on fructose carbon source","type":"exact"}],"termid":"FYPO:0001166"}


id: PBO:0051201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-28","termid":"PBO:0051201"}


id: PBO:0061192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U receptor 2","termid":"PBO:0061192"}


id: PBO:0034544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_maintenance_of_protein_localization_in_vacuole,_with_protein_secreted","termid":"PBO:0034544"}


id: PBO:0054382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1778","termid":"PBO:0054382"}


id: MOD:01629
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms cyclo[(prolylserin)-O-yl] cysteinate by the natural process of cross-linking an L-cysteine residue an L-proline residue, and an L-serine residue, or by effectively modifying a cysteine residue.","definition_xrefs":["RESID:AA0489","PubMed:7961166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclo[(prolylserin)-O-yl] cysteinate","synonyms":[{"name":"(3,6-dioxopyrrolo[4,5-a]piperazin-2-yl)methyl cysteinate","type":"exact"},{"name":"MOD_RES Cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"},{"name":"[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]methyl (2R)-2-amino-3-sulfanylpropanoate","type":"exact"},{"name":"cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"}],"termid":"MOD:01629"}


id: PBO:0059340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS9 antisense RNA 2","termid":"PBO:0059340"}


id: MOD:00899
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-palmitoyl-S-diacylglycerol-L-cysteine.","definition_xrefs":["RESID:AA0107#var","RESID:AA0069#var"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"N-palmitoyl-L-cysteine","termid":"MOD:00069"},{"relation_name":"has_functional_parent","term_name":"S-diacylglycerol-L-cysteine","termid":"MOD:00116"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-palmitoyl-S-diacylglycerol-L-cysteine","termid":"MOD:00899"}


id: PBO:0072733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 3","termid":"PBO:0072733"}


id: PBO:0044610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 13 pseudogene 1","termid":"PBO:0044610"}


id: PBO:0028907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_cellular_response_to_calcium_ion","termid":"PBO:0028907"}


id: GO:0070742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C2H2-type zinc finger domain of a protein. The C2H2 zinc finger is the classical zinc finger domain, in which two conserved cysteines and histidines co-ordinate a zinc ion.","definition_xrefs":["GOC:BHF","GOC:mah","Pfam:PF00096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"C2H2 zinc finger domain binding","termid":"GO:0070742"}


id: PBO:0034140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_many_homology_relationship_with","termid":"PBO:0034140"}


id: PBO:0014248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint ubiquitin ligase Dma1","termid":"PBO:0014248"}


id: PBO:0081367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 205","termid":"PBO:0081367"}


id: PBO:0073134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 6","termid":"PBO:0073134"}


id: PBO:0066368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 11","termid":"PBO:0066368"}


id: PBO:0034581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transport_along_microtubule","termid":"PBO:0034581"}


id: PBO:0069850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1136, pseudogene","termid":"PBO:0069850"}


id: GO:0034267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"discadenine metabolic process","synonyms":[{"name":"discadenine metabolism","type":"exact"}],"termid":"GO:0034267"}


id: PBO:0071368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 27","termid":"PBO:0071368"}


id: PBO:0070538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 4","termid":"PBO:0070538"}


id: GO:0097169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of AIM2, ASC, and caspase-1. AIM2 is a member of the HN-200 protein family that appears to be the sensor of cytosolic double-stranded DNA.","definition_xrefs":["GOC:vp","PMID:20303873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"AIM2 inflammasome complex","termid":"GO:0097169"}


id: GO:0043748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-succinylbenzoate + H2O = 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate.","definition_xrefs":["PMID:8335646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"O-succinylbenzoate synthase activity","secondary_identifiers":["EC:4.2.1.113"],"termid":"GO:0043748"}


id: PBO:0046864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 2B","termid":"PBO:0046864"}


id: GO:0030180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exchange diffusion of two solutes between the inside and outside of a cell or subcellular compartment, in which movement of one solute down a concentration gradient drives movement of the other solute in the opposite direction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete solute:solute exchange (obsolete GO:0030180)","synonyms":[{"name":"solute:solute exchange","type":"exact"}],"termid":"GO:0030180"}


id: PBO:0113121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-resident glycoprotein involved in high-pressure tolerance; proposed role promoting proper folding of nutrient permeases in the ER during hydrostatic pressure stress; contains two transmembrane domains, a C-terminal cytoplasmic domain and a luminal region containing 12 N-linked glycans; null mutant is synthetically sick with cdc13-1; SWAT-GFP and mCherry fusion proteins localize to the vacuole while SWAT-GFP fusion also localizes to the endoplasmic reticulum","termid":"PBO:0113121"}


id: PBO:0046031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit alpha","termid":"PBO:0046031"}


id: PATO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001174 urine composition (obsolete PATO:0001174)","termid":"PATO:0001174"}


id: GO:1903930
data:
  {"annotated_genes":["SJAG_04712"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903931"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pyrimidine-containing compound salvage.","definition_xrefs":["PMID:23695302","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pyrimidine-containing compound salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of pyrimidine salvage","type":"related"}],"termid":"GO:1903930","terms_by_termid":{"GO:1903931":null}}


id: GO:0061914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["PMID:19264869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0003420"},{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of organ growth","termid":"GO:0046621"},{"relation_name":"negatively_regulates","term_name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0061914"}


id: PBO:0062272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 3 pseudogene","termid":"PBO:0062272"}


id: PBO:0090576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim23","termid":"PBO:0090576"}


id: PBO:0062198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily U member 1 pseudogene","termid":"PBO:0062198"}


id: PBO:0091376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 2","termid":"PBO:0091376"}


id: GO:0008941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 NO + 2 O2 + NAD(P)H + H+ = 2 nitrate + NAD(P)+.","definition_xrefs":["EC:1.14.12.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitric oxide dioxygenase NAD(P)H activity","secondary_identifiers":["MetaCyc:R621-RXN","Reactome:R-HSA-1222723","Reactome:R-HSA-5340226"],"synonyms":[{"name":"NOD activity","type":"related"},{"name":"nitric oxide dioxygenase activity","type":"broad"}],"termid":"GO:0008941"}


id: FYPO:0007518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of DNA damage occurring as a side effect of transcription in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah","PMID:33153481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased transcription-induced DNA damage","synonyms":[{"name":"increased DNA damage by transcription","type":"exact"},{"name":"increased transcription-induced DNA damage during mitotic cell cycle","type":"related"},{"name":"increased transcription-induced DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0007518"}


id: GO:0031093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the platelet alpha granule.","definition_xrefs":["PMID:8467233","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"platelet alpha granule","termid":"GO:0031091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"platelet alpha granule lumen","synonyms":[{"name":"platelet alpha-granule lumen","type":"exact"}],"termid":"GO:0031093"}


id: FYPO:0003301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ubiquitin-dependent protein degradation via the N-end rule pathway begins later than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein degradation during meiosis","termid":"FYPO:0006531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein degradation via N-end rule pathway during meiosis","synonyms":[{"name":"delayed onset of protein degradation via N-end rule pathway during meiotic nuclear division","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein breakdown via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolic process via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolism via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein degradation via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed protein degradation via N-end rule pathway during meiosis","type":"exact"}],"termid":"FYPO:0003301"}


id: PBO:0111067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA, antisense cyp7, readthrough snd301","termid":"PBO:0111067"}


id: PBO:0086993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reticulon-interacting protein; ER integral membrane protein involved in the generation of tubular ER morphology; promotes membrane curvature; forms tubules in vitro; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; interacts with Yip1p to mediate membrane traffic and with Sey1p to maintain ER morphology; facilitates lipid exchange between the ER and mitochondria; forms ER foci upon DNA replication stress","termid":"PBO:0086993"}


id: PBO:0029010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029010"}


id: GO:0021560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the abducens nerve over time, from its formation to the mature structure. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve development","synonyms":[{"name":"CN VI development","type":"related"},{"name":"cranial nerve 6 development","type":"exact"},{"name":"cranial nerve VI development","type":"exact"}],"termid":"GO:0021560"}


id: GO:0051786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-13,14-dihydroretinol + A = all-trans-retinol + AH(2). Note that this reaction has only been observed to occur in the opposite direction.","definition_xrefs":["EC:1.3.99.23","RHEA:19193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"all-trans-retinol 13,14-reductase activity","secondary_identifiers":["MetaCyc:1.3.99.23-RXN","Reactome:R-HSA-8956427","KEGG_REACTION:R07163"],"synonyms":[{"name":"(13,14)-all-trans-retinol saturase activity","type":"exact"},{"name":"RetSat activity","type":"related"},{"name":"all-trans-13,14-dihydroretinol:acceptor 13,14-oxidoreductase activity","type":"exact"},{"name":"all-trans-retinol:all-trans-13,14-dihydroretinol saturase activity","type":"exact"},{"name":"retinol saturase activity","type":"related"}],"termid":"GO:0051786"}


id: PBO:0030487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_malonic_acid_import","termid":"PBO:0030487"}


id: PBO:0052694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 2","termid":"PBO:0052694"}


id: PBO:0049997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 3","termid":"PBO:0049997"}


id: PBO:0067853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 155","termid":"PBO:0067853"}


id: PBO:0013790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumerate reductase Osm1 (predicted)","termid":"PBO:0013790"}


id: PBO:0067779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 79","termid":"PBO:0067779"}


id: GO:0008898
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94656],"is_not":false,"summary":null,"term":"GO:0008898"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine.","definition_xrefs":["GOC:BHF","GOC:dph","EC:2.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"S-adenosylmethionine-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN","RHEA:21820"],"synonyms":[{"name":"L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine-homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"adenosylmethionine transmethylase activity","type":"related"},{"name":"adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine transmethylase activity","type":"related"}],"termid":"GO:0008898","terms_by_termid":{"GO:0008898":null}}


id: GO:0098715
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97773],"is_not":false,"summary":null,"term":"GO:0098715"}]},"cv_name":"biological_process","definition":"The directed movement of malonic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"malonic acid transmembrane transport","termid":"GO:1901553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"malonic acid import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097406"],"synonyms":[{"name":"malonate import into cell","type":"exact"},{"name":"malonic acid import into cell","type":"exact"}],"termid":"GO:0098715","terms_by_termid":{"GO:0098715":null}}


id: GO:0008614
data:
  {"annotated_genes":["SJAG_00691","SJAG_01881","SJAG_00283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88941],"is_not":false,"summary":null,"term":"GO:0008614"},{"annotations":[83899,91628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_00691":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"pyridoxine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006773"],"synonyms":[{"name":"pyridoxine metabolism","type":"exact"}],"termid":"GO:0008614","terms_by_termid":{"GO:0008614":null,"GO:0008615":null}}


id: PBO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate reductase (predicted)","termid":"PBO:0002669"}


id: PBO:0058763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6887","termid":"PBO:0058763"}


id: PBO:0050979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 25","termid":"PBO:0050979"}


id: FYPO:0006507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which duplication of DNA sequences in the subtelomeric region occur more frequently than in wild type cells during G0 phase.","definition_xrefs":["PomBase:mah","PMID:29167439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gross chromosomal rearrangement","termid":"FYPO:0001740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"increased subtelomeric DNA amplification during G0","synonyms":[{"name":"increased occurrence of subtelomeric DNA amplification during G0","type":"exact"},{"name":"increased subtelomeric DNA amplification during cell quiescence","type":"exact"},{"name":"increased subtelomeric DNA amplification during quiescence","type":"exact"},{"name":"increased subtelomeric DNA sequence duplication during G0","type":"exact"},{"name":"increased subtelomeric amplification during G0","type":"exact"}],"termid":"FYPO:0006507"}


id: PBO:0043061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chordin like 2","termid":"PBO:0043061"}


id: GO:0098910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an atrial cardiac muscle cell contributing to the regulation of its contraction. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"is_a","term_name":"regulation of cardiac conduction","termid":"GO:1903779"},{"relation_name":"regulates","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrial cardiac muscle cell action potential","termid":"GO:0098910"}


id: SO:1001266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001266 stop_codon_redefinition_as_selenocysteine (obsolete SO:1001266)","termid":"SO:1001266"}


id: PBO:0001271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCK subfamily","termid":"PBO:0001271"}


id: GO:0071667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RNA/DNA hybrid.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid binding","termid":"GO:0003676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DNA/RNA hybrid binding","synonyms":[{"name":"RNA/DNA hybrid binding","type":"exact"}],"termid":"GO:0071667"}


id: GO:0097647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by amylin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:10871296","GOC:bhm","PMID:12037140","PMID:18687416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor signaling pathway","termid":"GO:0097646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"amylin receptor signaling pathway","synonyms":[{"name":"amilyn receptor signalling pathway","type":"exact"}],"termid":"GO:0097647"}


id: GO:0034152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 6 signaling pathway","termid":"GO:0034151"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"negative regulation of TLR6 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034152"}


id: FYPO:0006998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a lower extent than normal at transposable elements. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PMID:26518661","PomBase:mah","GO:0043486","GO:0005721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"},{"relation_name":"is_a","term_name":"abnormal histone turnover","termid":"FYPO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone turnover at transposable element during vegetative growth","synonyms":[{"name":"decreased histone exchange at transposable element during mitotic cell cycle","type":"related"},{"name":"decreased histone exchange at transposon during vegetative growth","type":"exact"},{"name":"reduced histone exchange at transposable element during vegetative growth","type":"exact"}],"termid":"FYPO:0006998"}


id: PBO:0075466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA17 antisense RNA 1","termid":"PBO:0075466"}


id: GO:0048003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen in association with an MHC class Ib protein complex on its cell surface, including lipid extraction, degradation, and transport steps for the lipid antigen both prior to and following assembly with the MHC protein complex. The lipid antigen may originate from an endogenous or exogenous source of lipid. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["PMID:10375559","GOC:add","PMID:15928678","PMID:15928680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, lipid antigen","type":"exact"},{"name":"lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048003"}


id: GO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of sodium ion transport","synonyms":[{"name":"regulation of Na+ transport","type":"exact"},{"name":"regulation of sodium transport","type":"exact"}],"termid":"GO:0002028"}


id: PBO:0046395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPB41L1 antisense RNA 1","termid":"PBO:0046395"}


id: FYPO:0004038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which an increase in RNA level that occurs as part of a cellular response to hydrogen peroxide begins later than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:9450957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to hydrogen peroxide","termid":"FYPO:0000194"},{"relation_name":"is_a","term_name":"delayed onset of increase in RNA level during cellular response to oxidative stress","termid":"FYPO:0007793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"delayed onset of increase in RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"delayed increase in RNA level during cellular response to hydrogen peroxide","type":"exact"},{"name":"delayed onset of increase in RNA level during cellular response to H2O2","type":"exact"},{"name":"delayed onset of increase in RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"delayed onset of increase in RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"delayed onset of increase in transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004038"}


id: PBO:0002696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap145 (predicted)","termid":"PBO:0002696"}


id: FYPO:0000229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal mitotic nuclear division, such that the septum physically divides the nucleus into two parts, giving rise to inviable daughter cells.","definition_xrefs":["PomBase:mah","PomBase:jh","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"has_part","term_name":"premature septum assembly","termid":"FYPO:0003250"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"premature septum assembly","termid":"FYPO:0003250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000337","FYPO:0005447","FYPO:0000641","FYPO:0000004"],"is_obsolete":false,"name":"cut","secondary_identifiers":["FYPO:0000322","FYPO:0000323"],"synonyms":[{"name":"cut during mitotic cell cycle","type":"related"},{"name":"cut during vegetative growth","type":"exact"},{"name":"mitotic catastrophe","type":"related"},{"name":"septation following abnormal nuclear division","type":"exact"}],"termid":"FYPO:0000229"}


id: PBO:0056545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple coagulation factor deficiency 2, ER cargo receptor complex subunit","termid":"PBO:0056545"}


id: PBO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.20","termid":"PBO:0001800"}


id: GO:0052396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates programmed cell death in the symbiont, where programmed cell death proceeds by a non-apoptotic pathway. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont non-apoptotic programmed cell death (obsolete GO:0052396)","synonyms":[{"name":"activation by organism of symbiont non-apoptotic programmed cell death","type":"exact"},{"name":"induction by organism of symbiont non-apoptotic programmed cell death","type":"exact"}],"termid":"GO:0052396"}


id: MOD:01084
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that by reaction of iodoacetic acid effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a carboxymethyl group.","definition_xrefs":["Unimod:6#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetic acid derivatized amino-terminal residue","synonyms":[{"name":"Carboxymethyl","type":"related"},{"name":"Carboxymethyl (on Cysteine)","type":"exact"},{"name":"Iodoacetic acid derivative","type":"related"}],"termid":"MOD:01084"}


id: PBO:0052969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-L-3-hydroxyproline dehydratase","termid":"PBO:0052969"}


id: PBO:0077263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 11, pseudogene","termid":"PBO:0077263"}


id: PBO:0064426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 4","termid":"PBO:0064426"}


id: GO:0097313
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external part of the biofilm matrix, a structure lying external to bacterial cells. A biofilm is an aggregate of surface-associated bacteria, and the biofilm matrix is the envelope of polymeric substances that surrounds the bacteria.","definition_xrefs":["Wikipedia:Biofilm","GOC:imk","PMID:22571672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial biofilm matrix","termid":"GO:0097311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial biofilm matrix surface","termid":"GO:0097313"}


id: PR:P78953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mid1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"division mal foutue 1 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"Spom972h-mid1","type":"exact"}],"termid":"PR:P78953"}


id: GO:0006874
data:
  {"annotated_genes":["SJAG_02019","SJAG_04757","SJAG_04698","SJAG_03631","SJAG_03793","SJAG_04167","SJAG_03850","SJAG_04892","SJAG_04028","SJAG_01435","SJAG_03879","SJAG_04096","SJAG_02532","SJAG_03866","SJAG_01400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91587,91818,92937,94246,94458,97131,97747,104774,108454,109471,110038,111189,111660,114647],"is_not":false,"summary":null,"term":"GO:0006874"},{"annotations":[86847,87332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of calcium ions within a cell.","definition_xrefs":["GOC:ceb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"calcium ion homeostasis","termid":"GO:0055074"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01400":null,"SJAG_01435":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_03879":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04167":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_04892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular calcium ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular calcium ion homeostasis","type":"exact"},{"name":"regulation of calcium ion concentration","type":"broad"}],"termid":"GO:0006874","terms_by_termid":{"GO:0006874":null,"GO:0032468":null}}


id: PBO:0082618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a complex containing Cef1p; putatively involved in pre-mRNA splicing; has similarity to E. coli DnaJ and other DnaJ-like proteins and to S. pombe Cwf23p","termid":"PBO:0082618"}


id: GO:0051467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which a steroid hormone stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to steroid hormone","termid":"GO:0048545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of steroid hormone stimulus","termid":"GO:0051467"}


id: PBO:0017079
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GalactoMannan Synthesis defective","termid":"PBO:0017079"}


id: GO:0071723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopeptide, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds and containing a nonprotein group consisting of a lipid or lipids.","definition_xrefs":["GOC:add","PMID:12077222","PMID:12524386","PMID:2757794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"lipopeptide binding","synonyms":[{"name":"bacterial lipopeptide binding","type":"narrow"},{"name":"bacterial lipoprotein binding","type":"related"}],"termid":"GO:0071723"}


id: PBO:0027628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transposable_element-derived_small_RNA_level","termid":"PBO:0027628"}


id: PBO:0042971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 10","termid":"PBO:0042971"}


id: PBO:0059075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 3 pseudogene 1","termid":"PBO:0059075"}


id: PATO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being in opposition round a common axis.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"whorled","termid":"PATO:0001951"}


id: GO:2001223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuron migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of neuron migration","termid":"GO:2001222"},{"relation_name":"negatively_regulates","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron migration","synonyms":[{"name":"negative regulation of neuron chemotaxis","type":"exact"},{"name":"negative regulation of neuron guidance","type":"related"},{"name":"negative regulation of neuronal migration","type":"exact"}],"termid":"GO:2001223"}


id: PBO:0071123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 125","termid":"PBO:0071123"}


id: PBO:0001281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51D-like protein 1","termid":"PBO:0001281"}


id: GO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex composed of proteins required for beta adrenergic receptor activation of protein kinase A. It includes the Cav 12. subunit of L-type calcium channel, protein kinase A regulatory subunit 2(PKAR2), adenyl cyclase, beta-adrenergic receptor, G-alpha-S, protein phosphatase 2A (PP2A) and caveolin 3 (CAV3).","definition_xrefs":["PMID:16648270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"caveola","termid":"GO:0005901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"caveolar macromolecular signaling complex","synonyms":[{"name":"caveolar macromolecular signalling complex","type":"exact"}],"termid":"GO:0002095"}


id: SO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repetitive element that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"is_a","term_name":"engineered_foreign_region","termid":"SO:0000805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_repetitive_element","synonyms":[{"name":"engineered foreign repetitive element","type":"exact"}],"termid":"SO:0000293"}


id: GO:0003686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA repair enzyme (obsolete GO:0003686)","synonyms":[{"name":"DNA repair enzyme","type":"exact"}],"termid":"GO:0003686"}


id: PR:Q9Y709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- skp1 gene.","definition_xrefs":["UniProtKB:Q9Y709","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of kinetochore protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.05","synonyms":[{"name":"P19/Skp1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-skp1","type":"exact"}],"termid":"PR:Q9Y709"}


id: FYPO:0005187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transport RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Transport RNAs are transcribed from genes whose products are involved in one or more transport processes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of transport gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of transport gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of transport gene transcripts during vegetative growth","type":"exact"},{"name":"decreased transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of transport gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005187"}


id: PBO:0027982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_import_into_nucleus","termid":"PBO:0027982"}


id: PR:Q8TFH4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB17E12.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFH4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA methyltransferase PB17E12.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.10c","synonyms":[{"name":"Spom972h-SPAPB17E12.10c","type":"exact"},{"name":"rRNA (uridine-2'-O-)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH4"}


id: PBO:0030763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_zinc_ion","termid":"PBO:0030763"}


id: PBO:0079833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UMODL1 antisense RNA 1","termid":"PBO:0079833"}


id: PATO:0001588
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of rate which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of rate","termid":"PATO:0001586"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of rate","synonyms":[{"name":"low variability of rate","type":"exact"}],"termid":"PATO:0001588"}


id: GO:0030796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cycloartenol = (24R)-24-methylcycloart-25-en-3beta-ol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.142","RHEA:13137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cycloartenol 24-C-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.142-RXN","KEGG_REACTION:R05760"],"synonyms":[{"name":"S-adenosyl-L-methionine:cycloartenol 24-C-methyltransferase activity","type":"related"},{"name":"sterol C-methyltransferase activity","type":"broad"}],"termid":"GO:0030796"}


id: FYPO:0007264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the eisosome filament is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eisosome morphology","termid":"FYPO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"long eisosome filament","synonyms":[{"name":"elongated eisosome filament","type":"exact"},{"name":"increased eisosome filament length","type":"exact"},{"name":"long eisosome filament during mitotic cell cycle","type":"related"},{"name":"long eisosome filament during vegetative growth","type":"exact"},{"name":"long linear eisosomes","type":"exact"}],"termid":"FYPO:0007264"}


id: GO:0102979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: homofuraneol + NADP = (2E)-2-ethylidene-4-hydroxy-5-methyl-3(2H)-furanone + NADPH + H+.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete homofuraneol oxidoreductase activity (obsolete GO:0102979)","termid":"GO:0102979"}


id: PR:O94385
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pom152 gene.","definition_xrefs":["UniProtKB:O94385","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin pom152 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.07","synonyms":[{"name":"Spom972h-pom152","type":"exact"}],"termid":"PR:O94385"}


id: GO:0009581
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which an external stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of external stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of external stimulus","type":"related"}],"termid":"GO:0009581","terms_by_termid":{"GO:0050982":null}}


id: PBO:0077613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 4","termid":"PBO:0077613"}


id: GO:0061603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction GTP + molybdenum cofactor = diphosphate + guanylyl molybdenum cofactor.","definition_xrefs":["EC:2.7.7.77","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"molybdenum cofactor guanylyltransferase activity","secondary_identifiers":["RHEA:34243"],"termid":"GO:0061603"}


id: PBO:0079014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-SeC (anticodon TCA) 2-1","termid":"PBO:0079014"}


id: PBO:0003841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II","termid":"PBO:0003841"}


id: GO:0004521
data:
  {"annotated_genes":["SJAG_01948","SJAG_04519","SJAG_04019","SJAG_06022","SJAG_04091","SJAG_04582","SJAG_04198","SJAG_02790","SJAG_02156","SJAG_01463","SJAG_04916","SJAG_00400","SJAG_04435","SJAG_01433","SJAG_01884","SJAG_03689","SJAG_01623","SJAG_00754","SJAG_01260","SJAG_03234","SJAG_04527","SJAG_02621","SJAG_00306","SJAG_04885","SJAG_01551","SJAG_02547","SJAG_04006","SJAG_00955","SJAG_04907","SJAG_03425","SJAG_03962","SJAG_02374","SJAG_03952","SJAG_02039","SJAG_00997","SJAG_03328","SJAG_00772","SJAG_04587","SJAG_01476","SJAG_03539","SJAG_06613","SJAG_02553","SJAG_03796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84523,85198,85677,86537,86775,91964,103573,105117,109032,112439,114149],"is_not":false,"summary":null,"term":"GO:0004521"},{"annotations":[88280,106012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042781"},{"annotations":[114172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070551"},{"annotations":[87826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990174"},{"annotations":[72500,112099,98297,99563,105955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004525"},{"annotations":[101763,92632,111494,109603,111410,90840,92923,101764,114669,95612,100660,100879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000171"},{"annotations":[95613,100661,114670,100880,109604,111411,90841,92924,98175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[114174,88339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016891"},{"annotations":[86384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008419"},{"annotations":[99066,105240,94258,84480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004523"},{"annotations":[97455,113765,102027,96919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease activity","termid":"GO:0004519"},{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00400":null,"SJAG_00754":null,"SJAG_00772":null,"SJAG_00955":null,"SJAG_00997":null,"SJAG_01260":null,"SJAG_01433":null,"SJAG_01463":null,"SJAG_01476":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_01884":null,"SJAG_01948":null,"SJAG_02039":null,"SJAG_02156":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02621":null,"SJAG_02790":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03425":null,"SJAG_03539":null,"SJAG_03689":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_03962":null,"SJAG_04006":null,"SJAG_04019":null,"SJAG_04091":null,"SJAG_04198":null,"SJAG_04435":null,"SJAG_04519":null,"SJAG_04527":null,"SJAG_04582":null,"SJAG_04587":null,"SJAG_04885":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_06022":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0140098","GO:0016787"],"is_obsolete":false,"name":"RNA endonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9708812","Reactome:R-HSA-5601887","Reactome:R-HSA-6791223","Reactome:R-HSA-9009936","Reactome:R-HSA-425923","Reactome:R-HSA-5601910","Reactome:R-HSA-9009941","Reactome:R-HSA-9708327","Reactome:R-HSA-927836","Reactome:R-HSA-9023909","Reactome:R-HSA-6814555","Reactome:R-HSA-426520","Reactome:R-HSA-9023912"],"synonyms":[{"name":"endonuclease G activity","type":"related"},{"name":"endoribonuclease activity","type":"exact"}],"termid":"GO:0004521","terms_by_termid":{"GO:0000171":null,"GO:0000213":null,"GO:0004521":null,"GO:0004523":null,"GO:0004525":null,"GO:0004526":null,"GO:0008419":null,"GO:0016891":null,"GO:0042781":null,"GO:0070551":null,"GO:1990174":null}}


id: FYPO:0007337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 4 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K4 methylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K4 methylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K4 methylation at centromere","type":"exact"},{"name":"increased histone H3-K4 methylation at centromere during mitotic cell cycle during vegetative growth","type":"related"},{"name":"increased histone H3-K4 methylation at centromeric region","type":"exact"},{"name":"increased histone H3K4 methylation at centromere","type":"exact"},{"name":"increased histone H3K4me at centromere","type":"exact"},{"name":"increased histone lysine H3 K4 methylation at centromere","type":"exact"}],"termid":"FYPO:0007337"}


id: PBO:0091827
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid Transfer at Contact site","termid":"PBO:0091827"}


id: PBO:0074794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 12C","termid":"PBO:0074794"}


id: PBO:0089883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Mms2","termid":"PBO:0089883"}


id: PBO:0084746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrially-encoded 50-kD subunit of Endo.SceI; dimeric site-specific endonuclease that introduces double-stranded breaks at a number of well-defined sites in mitochondrial DNA, inducing homologous recombination; has a 26-bp recognition sequence in ATP6","termid":"PBO:0084746"}


id: FYPO:0002855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-cysteine ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glutamate-cysteine ligase activity","termid":"FYPO:0002853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased glutamate-cysteine ligase activity","synonyms":[{"name":"reduced glutamate-cysteine ligase activity","type":"exact"}],"termid":"FYPO:0002855"}


id: PBO:0034365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-trophically_interacts_with","termid":"PBO:0034365"}


id: PBO:0017430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_substrate","termid":"PBO:0017430"}


id: PBO:0031469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0031469"}


id: PR:O13648
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein arginine N-methyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein arginine N-methyltransferase rmt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.10c","secondary_identifiers":["UniProtKB:O13648"],"synonyms":[{"name":"Spom972h-PRMT3","type":"exact"}],"termid":"PR:O13648"}


id: PBO:0013076
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisA","termid":"PBO:0013076"}


id: PBO:0070765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11 pseudogene 1","termid":"PBO:0070765"}


id: PBO:0059063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 3B","termid":"PBO:0059063"}


id: PBO:0081451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 318","termid":"PBO:0081451"}


id: GO:0043272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethylene (C2-H4, ethene), occurring as part of the process of jasmonic acid and ethylene-dependent systemic resistance.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene biosynthetic process","termid":"GO:0009693"},{"relation_name":"part_of","term_name":"jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene biosynthesis involved in jasmonic acid and ethylene-dependent systemic resistance","synonyms":[{"name":"ethylene anabolism during jasmonic acid and ethylene-dependent systemic resistance","type":"related"},{"name":"ethylene biosynthetic process during jasmonic acid and ethylene-dependent systemic resistance","type":"related"},{"name":"ethylene formation during jasmonic acid and ethylene-dependent systemic resistance","type":"related"},{"name":"ethylene synthesis during jasmonic acid and ethylene-dependent systemic resistance","type":"related"}],"termid":"GO:0043272"}


id: GO:0060192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of lipase activity, the hydrolysis of a lipid or phospholipid.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"},{"relation_name":"is_a","term_name":"regulation of lipase activity","termid":"GO:0060191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipase activity","termid":"GO:0060192"}


id: MOD:01032
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a benzyloxymethyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzyloxymethyl modified residue","synonyms":[{"name":"Bom","type":"exact"}],"termid":"MOD:01032"}


id: PBO:0074845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 36B","termid":"PBO:0074845"}


id: _global:required_for
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Indicates that a modification is required for a GO function or process.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required_for","termid":"_global:required_for"}


id: GO:0046556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.","definition_xrefs":["EC:3.2.1.55","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"alpha-L-arabinofuranosidase activity","secondary_identifiers":["MetaCyc:3.2.1.55-RXN"],"synonyms":[{"name":"L-arabinosidase activity","type":"related"},{"name":"alpha-L-arabinanase activity","type":"related"},{"name":"alpha-L-arabinofuranoside arabinofuranohydrolase activity","type":"related"},{"name":"alpha-L-arabinofuranoside hydrolase activity","type":"related"},{"name":"alpha-L-arabinosidase activity","type":"related"},{"name":"alpha-N-arabinofuranosidase activity","type":"related"},{"name":"alpha-arabinofuranosidase activity","type":"related"},{"name":"alpha-arabinosidase activity","type":"related"},{"name":"arabinofuranosidase activity","type":"related"},{"name":"arabinosidase activity","type":"related"},{"name":"polysaccharide alpha-L-arabinofuranosidase activity","type":"exact"}],"termid":"GO:0046556"}


id: RO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"host_of","termid":"RO:0002453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_pathogen","termid":"RO:0002557"}


id: PBO:0069968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1263, pseudogene","termid":"PBO:0069968"}


id: GO:0070165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of adiponectin from a cell.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of adiponectin secretion","termid":"GO:0070163"},{"relation_name":"positively_regulates","term_name":"adiponectin secretion","termid":"GO:0070162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of adiponectin secretion","synonyms":[{"name":"activation of adiponectin secretion","type":"narrow"},{"name":"stimulation of adiponectin secretion","type":"narrow"},{"name":"up regulation of adiponectin secretion","type":"exact"},{"name":"up-regulation of adiponectin secretion","type":"exact"},{"name":"upregulation of adiponectin secretion","type":"exact"}],"termid":"GO:0070165"}


id: GO:0060055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["PMID:15039218","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis","termid":"GO:0001525"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiogenesis involved in wound healing","termid":"GO:0060055"}


id: MOD:00783
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of an L-arginine residue with two methyl groups.","definition_xrefs":["OMSSA:37","Unimod:36#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"},{"relation_name":"is_a","term_name":"methylated arginine","termid":"MOD:00658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"dimethylated L-arginine","synonyms":[{"name":"Dimethyl","type":"related"},{"name":"NNMe2Arg","type":"exact"},{"name":"dimethylr","type":"exact"}],"termid":"MOD:00783"}


id: GO:0015673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of silver (Ag+) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"silver ion transport","synonyms":[{"name":"silver transport","type":"exact"}],"termid":"GO:0015673"}


id: GO:0034827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxy-5,6,7,8-tetrahydronaphthalene + O2 = 4-(2-oxocyclohexyl)-2-hydroxy-buta-2,4-dienoate + H+.","definition_xrefs":["UM-BBD_reactionID:r1171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,2-dihydroxy-5,6,7,8-tetrahydronaphthalene extradiol dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034827"}


id: GO:0018162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a cross-link between peptidyl-cysteine and peptidyl-threonine via the formation of S-(2-aminovinyl)-3-methyl-D-cysteine.","definition_xrefs":["RESID:AA0253"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-(2-aminovinyl)-3-methyl-D-cysteine (obsolete GO:0018162)","termid":"GO:0018162"}


id: GO:0007149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete colony morphology (obsolete GO:0007149)","synonyms":[{"name":"colony morphology","type":"exact"}],"termid":"GO:0007149"}


id: PBO:0034813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein associated with respiratory chain (predicted)","termid":"PBO:0034813"}


id: PR:O74854
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.04","synonyms":[{"name":"Spom972h-pof6","type":"exact"}],"termid":"PR:O74854"}


id: PBO:0002546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sorting and assembly machinery complex subunit Sam50 (predicted)","termid":"PBO:0002546"}


id: PBO:0065661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type K","termid":"PBO:0065661"}


id: PR:P05511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPMIT.06 gene.","definition_xrefs":["UniProtKB:P05511","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized 91 kDa protein in cob intron (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.06","synonyms":[{"name":"Spom972h-SPMIT.06","type":"exact"}],"termid":"PR:P05511"}


id: FYPO:0003029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mRNA splicing via the spliceosome is decreased.","definition_xrefs":["PomBase:mah","PMID:24298023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"decreased mRNA splicing, via spliceosome","synonyms":[{"name":"decreased mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"decreased mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"decreased nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"decreased splicing","type":"broad"},{"name":"reduced mRNA splicing, via spliceosome","type":"exact"}],"termid":"FYPO:0003029"}


id: GO:1900315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltopentaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentasaccharide transport","termid":"GO:1900360"},{"relation_name":"regulates","term_name":"maltopentaose transport","termid":"GO:2001101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of maltopentaose transport","termid":"GO:1900315"}


id: PBO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44 (predicted)","termid":"PBO:0000658"}


id: PATO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being partially upright in position or posture.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erect","termid":"PATO:0000622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi erect","synonyms":[{"name":"semi upright","type":"exact"}],"termid":"PATO:0002260"}


id: GO:2000422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"is_a","term_name":"regulation of eosinophil migration","termid":"GO:2000416"},{"relation_name":"regulates","term_name":"eosinophil chemotaxis","termid":"GO:0048245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil chemotaxis","termid":"GO:2000422"}


id: PBO:0029160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sensitivity_to_chemical","termid":"PBO:0029160"}


id: PBO:0069175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 429, pseudogene","termid":"PBO:0069175"}


id: PR:Q9P3U9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-related modifier 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR14986:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-related modifier 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.04","secondary_identifiers":["UniProtKB:Q9P3U9"],"synonyms":[{"name":"SPCC548.04","type":"related"},{"name":"Spom972h-URM1","type":"exact"}],"termid":"PR:Q9P3U9"}


id: PBO:0059457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minisatellite binding protein 1","termid":"PBO:0059457"}


id: PBO:0071214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 55","termid":"PBO:0071214"}


id: PBO:0002698
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.11","termid":"PBO:0002698"}


id: PBO:0055606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3044","termid":"PBO:0055606"}


id: PBO:0067683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 870, pseudogene","termid":"PBO:0067683"}


id: PBO:0055954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 66","termid":"PBO:0055954"}


id: GO:0071671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of smooth muscle cell chemotaxis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell migration","termid":"GO:0014910"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"smooth muscle cell chemotaxis","termid":"GO:0071670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell chemotaxis","termid":"GO:0071671"}


id: GO:0034409
data:
  {"annotated_genes":["SJAG_04771","SJAG_04666","SJAG_03587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[88542,83689],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascospore wall beta-glucan metabolic process","termid":"GO:0034408"},{"relation_name":"is_a","term_name":"fungal-type cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0071969"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0007049","GO:0008150","GO:0044085","GO:0030437"],"is_obsolete":false,"name":"ascospore wall (1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall 1,3-beta-D-glucan metabolic process","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan metabolic process","type":"broad"},{"name":"ascospore wall 1,3-beta-glucan metabolism","type":"exact"},{"name":"ascospore wall beta-1,3 glucan metabolic process","type":"exact"},{"name":"ascospore wall beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0034409","terms_by_termid":{"GO:0034413":null,"GO:0140748":null}}


id: RO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has gene product y if and only if x is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_gene_product","termid":"RO:0002205"}


id: GO:0010370
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromocenter adjacent to the nucleolus.","definition_xrefs":["PMID:15805479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromocenter","termid":"GO:0010369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perinucleolar chromocenter","termid":"GO:0010370"}


id: PBO:0072450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 14","termid":"PBO:0072450"}


id: PBO:0054343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1736","termid":"PBO:0054343"}


id: PBO:0005437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATM checkpoint kinase","termid":"PBO:0005437"}


id: GO:1905105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ouabain stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:23643758"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to ouabain (obsolete GO:1905105)","termid":"GO:1905105"}


id: PBO:0085967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overproduction suppresses lethality due to expression of the dominant PET9 allele AAC2-A128P; may have a role in telomere maintenance; target of UME6 regulation","termid":"PBO:0085967"}


id: PBO:0080522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family homolog 4, pseudogene","termid":"PBO:0080522"}


id: PBO:0004178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane receptor-like protein (predicted)","termid":"PBO:0004178"}


id: PBO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homodimeric","termid":"PBO:0001750"}


id: FYPO:0005290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is decreased.","definition_xrefs":["PMID:26132084","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0005544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to plasma membrane at cell division site during vegetative growth","synonyms":[{"name":"decreased protein localisation to plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"decreased protein localization to plasma membrane at cell division site during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to plasma membrane at cell division site during vegetative growth","type":"exact"}],"termid":"FYPO:0005290"}


id: PBO:0040678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR3 adaptor protein, NSP family member","termid":"PBO:0040678"}


id: GO:0047905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose 6-phosphate + phosphate = acetyl phosphate + D-erythrose 4-phosphate + H2O.","definition_xrefs":["EC:4.1.2.22","MetaCyc:FRUCTOSE-6-PHOSPHATE-PHOSPHOKETOLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fructose-6-phosphate phosphoketolase activity","secondary_identifiers":["RHEA:12196"],"synonyms":[{"name":"D-fructose-6-phosphate D-erythrose-4-phosphate-lyase (adding phosphate; acetyl-phosphate-forming)","type":"related"},{"name":"D-fructose-6-phosphate D-erythrose-4-phosphate-lyase (phosphate-acetylating) activity","type":"related"}],"termid":"GO:0047905"}


id: PBO:0040190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 3","termid":"PBO:0040190"}


id: GO:0051668
data:
  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id: PBO:0053389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 316","termid":"PBO:0053389"}


id: PBO:0072694
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX3 antisense RNA 1","termid":"PBO:0072694"}


id: SO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif that is found in eukaryotic rDNA repeats, and is a site of replication fork pausing.","definition_xrefs":["PMID:17614787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_region_replication_fork_barrier","synonyms":[{"name":"mating type region replication fork barrier","type":"exact"}],"termid":"SO:0002021"}


id: GO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which an oenocyte splits off of an existing epithelial sheet.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"oenocyte delamination","termid":"GO:0060233"}


id: GO:0018581
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzene-1,2,4-triol + O2 = 3-hydroxy-cis,cis-muconate + 2 H+.","definition_xrefs":["RHEA:19441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydroxyquinol 1,2-dioxygenase activity","secondary_identifiers":["EC:1.13.11.37","MetaCyc:RXN-17556","UM-BBD_reactionID:r0232"],"termid":"GO:0018581"}


id: FYPO:0001695
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a protease inhibitor. Cells stop growing (and may die) at a concentration of a protease inhibitor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to protease inhibitor","synonyms":[{"name":"hypersensitive to protease inhibitor","type":"exact"},{"name":"sensitive to protease inhibitor during mitotic cell cycle","type":"related"},{"name":"sensitive to protease inhibitor during vegetative growth","type":"exact"}],"termid":"FYPO:0001695"}


id: PBO:0043491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centlein","termid":"PBO:0043491"}


id: GO:0097733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialised 9+0 non-motile cilium found in photoreceptor cells. A ciliary transition zone called 'photoreceptor connecting cilium' links the photoreceptor outer segment to the inner segment.","definition_xrefs":["Wikipedia:Photoreceptor_cell#Histology","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"is_a","term_name":"9+0 non-motile cilium","termid":"GO:0097731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor cell cilium","synonyms":[{"name":"photoreceptor cilium","type":"exact"}],"termid":"GO:0097733"}


id: PBO:0030897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_regulation_phenotype_during_vegetative_growth","termid":"PBO:0030897"}


id: PBO:0063993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 27","termid":"PBO:0063993"}


id: PBO:0050221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 38","termid":"PBO:0050221"}


id: GO:0052476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont MAP kinase-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway (obsolete GO:0052476)","synonyms":[{"name":"negative regulation by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related symbiont MAPK-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related symbiont mitogen-activated protein kinase-mediated signal transduction pathway","type":"exact"},{"name":"suppression by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052476"}


id: PBO:0005290
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally induced by Cuf1","termid":"PBO:0005290"}


id: PBO:0031562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_binding","termid":"PBO:0031562"}


id: GO:0015858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nucleoside transport","termid":"GO:0015858"}


id: PBO:0045625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 37 (pseudogene)","termid":"PBO:0045625"}


id: PBO:0047196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 215 member A","termid":"PBO:0047196"}


id: PBO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc4","termid":"PBO:0002330"}


id: PBO:0047485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 1 pseudogene 1","termid":"PBO:0047485"}


id: GO:0048396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"is_a","term_name":"regulation of intermediate mesodermal cell fate determination","termid":"GO:0048395"},{"relation_name":"negatively_regulates","term_name":"intermediate mesodermal cell fate determination","termid":"GO:0048394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intermediate mesodermal cell fate determination","synonyms":[{"name":"down regulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"downregulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"inhibition of intermediate mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048396"}


id: PBO:0070215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 147 pseudogene","termid":"PBO:0070215"}


id: PBO:0044633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA cross-link repair 1A","termid":"PBO:0044633"}


id: PBO:0090508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn2","termid":"PBO:0090508"}


id: PBO:0059199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X6, pseudogene","termid":"PBO:0059199"}


id: GO:0033045
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id: GO:0034282
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id: PBO:0082519
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