# terms

id: GO:0019239
data:
  {"annotated_genes":["SJAG_01673","SJAG_00352","SJAG_01054","SJAG_00107","SJAG_04189","SJAG_04123","SJAG_03771","SJAG_01997","SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83793,104427],"is_not":false,"summary":null,"term":"GO:0019239"},{"annotations":[97932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003876"},{"annotations":[85354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004126"},{"annotations":[104488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004132"},{"annotations":[113263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008835"},{"annotations":[111134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008892"},{"annotations":[97230,100356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[100070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of an amino group from a substrate, producing a substituted or nonsubstituted ammonia (NH3/NH2R).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00352":null,"SJAG_01054":null,"SJAG_01673":null,"SJAG_01997":null,"SJAG_03771":null,"SJAG_04123":null,"SJAG_04189":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9014641","Reactome:R-HSA-9734745","Reactome:R-HSA-9754964","Reactome:R-HSA-74241"],"termid":"GO:0019239","terms_by_termid":{"GO:0003876":null,"GO:0004126":null,"GO:0004132":null,"GO:0008835":null,"GO:0008892":null,"GO:0019239":null,"GO:0043829":null,"GO:0052717":null}}


id: PBO:0080512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP actin nucleation promoting factor","termid":"PBO:0080512"}


id: PBO:0055034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2449","termid":"PBO:0055034"}


id: PBO:0088338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase","termid":"PBO:0088338"}


id: PBO:0028403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ubiquinone_binding","termid":"PBO:0028403"}


id: GO:1902606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of large conductance calcium-activated potassium channel activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:23407708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of large conductance calcium-activated potassium channel activity","synonyms":[{"name":"regulation of BK KCa channels","type":"exact"},{"name":"regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"regulation of BK channel activity","type":"related"},{"name":"regulation of large conductance KCa channels","type":"exact"}],"termid":"GO:1902606"}


id: PBO:0034211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_intercellular_endoparasite","termid":"PBO:0034211"}


id: PBO:0036424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Aha1","termid":"PBO:0036424"}


id: GO:0052184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of hormones or growth regulators in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont hormone or growth regulator levels (obsolete GO:0052184)","synonyms":[{"name":"modulation by organism of symbiont hormone or growth regulator levels","type":"exact"}],"termid":"GO:0052184"}


id: PBO:0063447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 7B","termid":"PBO:0063447"}


id: PBO:0041137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betacellulin","termid":"PBO:0041137"}


id: GO:0052517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death in the symbiont, where programmed cell death proceeds by a non-apoptotic pathway. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont non-apoptotic programmed cell death (obsolete GO:0052517)","synonyms":[{"name":"positive regulation by organism of symbiont non-apoptotic programmed cell death","type":"exact"}],"termid":"GO:0052517"}


id: PBO:0003973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/transcription factor TFIID complex subunit Taf10","termid":"PBO:0003973"}


id: PBO:0084947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multifunctional lipase/hydrolase/phospholipase; triacylglycerol lipase, steryl ester hydrolase, and Ca2+-independent phospholipase A2; catalyzes acyl-CoA dependent acylation of LPA to PA; required with Tgl3p for timely bud formation; phosphorylated and activated by Cdc28p; TGL4 has a paralog, TGL5, that arose from the whole genome duplication","termid":"PBO:0084947"}


id: FYPO:0000335
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic 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type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild 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assayed or wild type"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280","SJAG_03596","SJAG_01143","SJAG_02392"],"name":"abnormal cellular component organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27059155":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33495454":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_04284","SJAG_02763","SJAG_01745","SJAG_04703","SJAG_03892","SJAG_05207","SJAG_01374","SJAG_03940","SJAG_02392","SJAG_04280","SJAG_01242","SJAG_01906","SJAG_04464","SJAG_03596","SJAG_03449","SJAG_02592","SJAG_03891","SJAG_04522","SJAG_00426","SJAG_01143"],"single_locus_genotype_uniquenames":["rga4delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","nup132delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","nem2delta","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","for3delta","man1delta","alx1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","sty1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","ned1delta","nem1delta","lem2delta","vps32delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cellular component organisation","type":"exact"},{"name":"abnormal cellular component organization at cellular level","type":"exact"}],"termid":"FYPO:0000335","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000356":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0000815":null,"FYPO:0001369":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO:0003779":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0006054":null,"FYPO:0006433":null,"FYPO:0006945":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensing transcription factor Fep1","termid":"PBO:0000364"}


id: PATO:0001230
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's power or force.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strength","termid":"PATO:0001230"}


id: PBO:0057242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 433","termid":"PBO:0057242"}


id: GO:0090551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of manganese.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to manganese starvation","termid":"GO:0090551"}


id: GO:0072328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alkene binding","termid":"GO:0072328"}


id: GO:0007002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete centromere binding (obsolete GO:0007002)","synonyms":[{"name":"centromere binding","type":"exact"}],"termid":"GO:0007002"}


id: GO:0043465
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fermentation, the anaerobic enzymatic conversion of organic compounds, especially carbohydrates, to other compounds, especially to ethyl alcohol, resulting in energy in the form of adenosine triphosphate (ATP).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"regulates","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of fermentation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043465","terms_by_termid":{"GO:2001172":null}}


id: PBO:0054230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1612","termid":"PBO:0054230"}


id: PR:Q9P6R6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit delta, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13822:SF1","OMA:SCHPO03536","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit delta, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.04","secondary_identifiers":["UniProtKB:Q9P6R6"],"synonyms":[{"name":"F-ATPase delta subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP5D","type":"exact"}],"termid":"PR:Q9P6R6"}


id: PBO:0000770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L38 (predicted)","termid":"PBO:0000770"}


id: GO:0071628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a fungal-type vacuole membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of fungal-type vacuolar membrane (obsolete GO:0071628)","termid":"GO:0071628"}


id: PBO:0044965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 11","termid":"PBO:0044965"}


id: FYPO:0000508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of nuclear export is decreased. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased nuclear export","synonyms":[{"name":"decreased nuclear export during mitotic cell cycle","type":"related"},{"name":"decreased nuclear export during vegetative growth","type":"exact"},{"name":"nuclear export: decreased","type":"related"},{"name":"reduced nuclear export","type":"exact"}],"termid":"FYPO:0000508"}


id: PBO:0065823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5C, member RAS oncogene family pseudogene 1","termid":"PBO:0065823"}


id: PR:O14189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC10F6.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog C10F6.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.17c","synonyms":[{"name":"Spom972h-SPAC10F6.17c","type":"exact"},{"name":"pyruvate dehydrogenase (Lipoamide) phosphatase C10F6.17c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14189"}


id: SO:0001571
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby a new splice site is created due to the activation of a new donor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptic_splice_site_variant","termid":"SO:0001569"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_donor","synonyms":[{"name":"cryptic splice donor","type":"exact"}],"termid":"SO:0001571"}


id: GO:0034677
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha7 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"integrin alpha7-beta1 complex","synonyms":[{"name":"ITGA7-ITGB1 complex","type":"narrow"},{"name":"alpha7-beta1 integrin complex","type":"exact"}],"termid":"GO:0034677"}


id: FYPO:0001998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleoside diphosphate kinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal nucleoside diphosphate kinase activity","termid":"FYPO:0001997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleoside diphosphate kinase activity","synonyms":[{"name":"reduced nucleoside diphosphate kinase activity","type":"exact"}],"termid":"FYPO:0001998"}


id: FYPO:0003296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ribosome binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000257"],"is_obsolete":false,"name":"normal ribosome binding","termid":"FYPO:0003296"}


id: GO:0047286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptide diphthamide + NAD+ = peptide N-(ADP-D-ribosyl)diphthamide + niacinamide.","definition_xrefs":["EC:2.4.2.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"NAD+-diphthamide ADP-ribosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11372","Reactome:R-HSA-5336421","RHEA:11820"],"synonyms":[{"name":"ADP-ribosyltransferase activity","type":"broad"},{"name":"NAD+:peptide-diphthamide N-(ADP-D-ribosyl)transferase activity","type":"related"},{"name":"NAD-diphthamide ADP-ribosyltransferase activity","type":"exact"},{"name":"mono(ADP-ribosyl)transferase activity","type":"broad"}],"termid":"GO:0047286"}


id: PBO:0045689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNLL2 divergent transcript","termid":"PBO:0045689"}


id: GO:0007112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that occurs as part of the male meiotic cell cycle and results in the division of the cytoplasm of a cell to produce two daughter cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cytokinesis","termid":"GO:0033206"},{"relation_name":"part_of","term_name":"male meiotic nuclear division","termid":"GO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"male meiosis cytokinesis","synonyms":[{"name":"cytokinesis after male meiosis","type":"exact"},{"name":"cytokinesis involved in male meiotic cell cycle","type":"exact"}],"termid":"GO:0007112"}


id: PBO:0067457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 582, pseudogene","termid":"PBO:0067457"}


id: GO:0014847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the proximal stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The proximal stomach, composed of the fundus and upper body, shows low frequency, sustained tonic contractions that are responsible for generating a basal pressure within the stomach.","definition_xrefs":["PMID:30252381","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonic smooth muscle contraction","termid":"GO:0014820"},{"relation_name":"is_a","term_name":"stomach smooth muscle contraction","termid":"GO:0120063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal stomach smooth muscle contraction","termid":"GO:0014847"}


id: GO:0102094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a demethylmenaquinol = S-adenosyl-L-homocysteine + H+ + a menaquinol.","definition_xrefs":["PMID:1444716","PMID:9045837","RHEA:26466","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity","secondary_identifiers":["EC:2.1.1.163","MetaCyc:RXN-11046"],"termid":"GO:0102094"}


id: GO:0102976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versiconol + NADP = versiconal hemiacetal + NADPH + H+.","definition_xrefs":["EC:1.1.1.353","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"versiconal reductase activity","secondary_identifiers":["RHEA:35699","MetaCyc:RXN-9491"],"termid":"GO:0102976"}


id: PBO:0059589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 1","termid":"PBO:0059589"}


id: PBO:0074446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 47","termid":"PBO:0074446"}


id: GO:0032356
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032357"}]},"cv_name":"molecular_function","definition":"Binding to a DNA region containing an oxidized residue.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damaged DNA binding","termid":"GO:0003684"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"oxidized DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxidised DNA binding","type":"exact"}],"termid":"GO:0032356","terms_by_termid":{"GO:0032357":null}}


id: GO:0042923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently and stoichiometrically with neuropeptides, peptides with direct synaptic effects (peptide neurotransmitters) or indirect modulatory effects on the nervous system (peptide neuromodulators).","definition_xrefs":["PMID:38337033","PMID:10414961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide binding","termid":"GO:0042277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neuropeptide binding","termid":"GO:0042923"}


id: GO:0033295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroxyectoine.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"quaternary ammonium group binding","termid":"GO:0050997"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hydroxyectoine binding","termid":"GO:0033295"}


id: GO:0052106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a community of single-celled organisms living in intimate contact with a host organism monitors population density by detecting the concentration of small diffusible signal molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete quorum sensing involved in interaction with host (obsolete GO:0052106)","synonyms":[{"name":"quorum sensing during interaction with host","type":"related"}],"termid":"GO:0052106"}


id: FYPO:0001375
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115257],"is_not":false,"summary":null,"term":"FYPO:0001375"},{"annotations":[115207,115208,115219,115215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from, a place where it is normally found.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_01745":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null,"SJAG_05207":null},"genotype_count":3,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abolished protein localization","references_by_uniquename":{"PMID:25866389":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_01745","SJAG_01143"],"single_locus_genotype_uniquenames":["lem2delta","mid1delta"],"synonyms":[{"name":"protein absent from specific location in cell","type":"related"},{"name":"protein localisation abolished","type":"exact"},{"name":"protein localization abolished","type":"exact"}],"termid":"FYPO:0001375","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001375":null,"FYPO:0007177":null}}


id: GO:0090394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the establishment or decreases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"negatively_regulates","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of excitatory postsynaptic potential","synonyms":[{"name":"negative regulation of EPSP","type":"related"},{"name":"negative regulation of excitatory post-synaptic membrane potential","type":"exact"},{"name":"reduction of excitatory postsynaptic membrane potential","type":"exact"}],"termid":"GO:0090394"}


id: GO:0006126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete other pathways of electron transport (obsolete GO:0006126)","synonyms":[{"name":"other pathways of electron transport","type":"exact"}],"termid":"GO:0006126"}


id: PBO:0084062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of the SEA complex, a coatomer-related complex that associates dynamically with the vacuole; Iml1p functions in the SEACIT complex as a GAP for the Rag family GTPase Gtr1p (EGOC subunit), resulting in the inhibition of TORC1 signaling in response to amino acid deprivation; the Iml1p/SEACIT complex is required for non-nitrogen-starvation (NNS)-induced autophagy","termid":"PBO:0084062"}


id: PBO:0070798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 28","termid":"PBO:0070798"}


id: PBO:0057418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548t","termid":"PBO:0057418"}


id: PBO:0081601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 525","termid":"PBO:0081601"}


id: PBO:0087848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR-containing co-chaperone; binds both Hsp82p (Hsp90) and Ssa1p (Hsp70); stimulates ATPase activity of Ssa1p; ts mutants reduce Hsp82p function, overexpression suppresses phenotypes of HSP82 ts allele and cpr7 deletion; human homolog TTC4 complements yeast cns1 mutant","termid":"PBO:0087848"}


id: MOD:00120
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form meso-lanthionine.","definition_xrefs":["RESID:AA0111","PubMed:15023056","PubMed:3769923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"lanthionine","termid":"MOD:01841"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meso-lanthionine","synonyms":[{"name":"meso-lanthionine","type":"exact"},{"name":"(2R,2'S)-3,3'-sulfanediylbis(2-aminopropanoic acid)","type":"exact"},{"name":"(2R,2'S)-3,3'-thiobis-(2-aminopropanoic acid)","type":"exact"},{"name":"(2R,6S)-2,6-diamino-4-thiaheptanedioic acid","type":"exact"},{"name":"(2R,6S)-meso-lanthionine","type":"exact"},{"name":"(2S)-2-amino-3-[[(2R)-2-amino-2-carboxyethyl]sulfanyl]propanoic acid","type":"exact"},{"name":"(2S,6R)-meso-lanthionine","type":"related"},{"name":"(R)-S-(2-amino-2-carboxyethyl)-D-cysteine","type":"exact"},{"name":"(R,S)-bis(2-amino-2-carboxyethyl)sulfide","type":"exact"},{"name":"3,3'-thiobis-meso-alanine","type":"exact"},{"name":"CROSSLNK Lanthionine (Cys-Ser)","type":"exact"},{"name":"CROSSLNK Lanthionine (Ser-Cys)","type":"exact"},{"name":"XLNK-SCys-(D)3Dha","type":"exact"},{"name":"cysteine-3-D-alanine thioether","type":"exact"}],"termid":"MOD:00120"}


id: PBO:0050076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemicentin 1","termid":"PBO:0050076"}


id: GO:0048403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to brain-derived neurotrophic factor.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin binding","termid":"GO:0043121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"brain-derived neurotrophic factor binding","synonyms":[{"name":"BDNF binding","type":"exact"},{"name":"neurotrophin TRKB receptor activity","type":"related"}],"termid":"GO:0048403"}


id: GO:1990385
data:
  {"annotated_genes":["SJAG_00930","SJAG_04412","SJAG_03073","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97535,99659,112770,114757],"is_not":false,"summary":null,"term":"GO:1990385"}]},"cv_name":"cellular_component","definition":"The area in the center of the meiotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GOC:kmv","PMID:12707312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle midzone","termid":"GO:0051233"},{"relation_name":"part_of","term_name":"meiotic spindle","termid":"GO:0072687"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_01837":null,"SJAG_03073":null,"SJAG_04412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"meiotic spindle midzone","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990385","terms_by_termid":{"GO:1990385":null}}


id: GO:1900893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tridecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"tridecane metabolic process","termid":"GO:1900631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tridecane metabolic process","synonyms":[{"name":"regulation of tridecane metabolism","type":"exact"}],"termid":"GO:1900893"}


id: PBO:0079450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor 2, mitochondrial calcium regulator","termid":"PBO:0079450"}


id: GO:0022881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetylgalactosamine(out) = protein histidine + N-acetylgalactosamine phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose transmembrane transporter activity","termid":"GO:0005355"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"N-acetylgalactosamine transmembrane transporter activity","termid":"GO:0015571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0016740","GO:0003824","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N-acetylgalactosamine phosphotransferase system transporter activity","synonyms":[{"name":"N-acetylgalactosamine PTS transporter activity","type":"exact"}],"termid":"GO:0022881"}


id: PBO:0082382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta3-like subunit of the yeast AP-3 complex; functions in transport of alkaline phosphatase to the vacuole via the alternate pathway; exists in both cytosolic and peripherally associated membrane-bound pools","termid":"PBO:0082382"}


id: PBO:0083852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain an S1 RNA binding domain; human homolog EXOSC1 partially complements yeast csl4 null mutant, and can complement inviability of strain in which expression of CSL4 is repressed","termid":"PBO:0083852"}


id: GO:0047328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-hexose + acyl phosphate = D-hexose phosphate + an acid.","definition_xrefs":["MetaCyc:2.7.1.61-RXN","EC:2.7.1.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"acyl-phosphate-hexose phosphotransferase activity","secondary_identifiers":["RHEA:13077"],"synonyms":[{"name":"acyl-phosphate:D-hexose phosphotransferase activity","type":"related"},{"name":"hexose phosphate:hexose phosphotransferase activity","type":"related"}],"termid":"GO:0047328"}


id: PBO:0081044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3HC-type containing 1","termid":"PBO:0081044"}


id: GO:0004768
data:
  {"annotated_genes":["SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110513],"is_not":false,"summary":null,"term":"GO:0004768"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 + octadecanoyl-CoA = (9Z)-octadecenoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:19721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"stearoyl-CoA 9-desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8847579","EC:1.14.19.1","Reactome:R-HSA-5690565","GO:0016214","GO:0043735","MetaCyc:1.14.19.1-RXN"],"synonyms":[{"name":"acyl-CoA desaturase","type":"broad"},{"name":"delta(9)-desaturase activity","type":"broad"},{"name":"delta9-desaturase","type":"broad"},{"name":"fatty acid desaturase","type":"broad"},{"name":"stearoyl-CoA desaturase activity","type":"broad"}],"termid":"GO:0004768","terms_by_termid":{"GO:0004768":null}}


id: PBO:0057829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3147 host gene","termid":"PBO:0057829"}


id: PATO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000173 function (obsolete PATO:0000173)","termid":"PATO:0000173"}


id: PBO:0059284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L41","termid":"PBO:0059284"}


id: PATO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's not increasing over time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-progressive","termid":"PATO:0002026"}


id: PBO:0085306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase subunit of the trehalose-6-P synthase/phosphatase complex; involved in the synthesis of storage carbohydrate trehalose; positive regulator of autophagy involved in the dephosphorylation of Rim15p leading to ATG8 induction; expression is induced by stress conditions and repressed by the Ras-cAMP pathway; protein abundance increases in response to DNA replication stress","termid":"PBO:0085306"}


id: PBO:0074891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 66","termid":"PBO:0074891"}


id: GO:0120323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one or more ubiquitin groups are added to a lipid.","definition_xrefs":["PMID:34012115","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification by small protein conjugation","termid":"GO:0120322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid ubiquitination","termid":"GO:0120323"}


id: PBO:0054605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2010","termid":"PBO:0054605"}


id: SO:0002092
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of exonic sequence of the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_exon_variant","synonyms":[{"name":"5 prime UTR exon variant","type":"exact"}],"termid":"SO:0002092"}


id: FYPO:0006448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, localization of a protein from the Golgi apparatus to the cleavage furrow ring is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of protein localization from Golgi apparatus to cleavage furrow","synonyms":[{"name":"decreased rate of protein localisation from Golgi apparatus to cleavage furrow","type":"exact"},{"name":"decreased rate of protein localization from Golgi apparatus to cleavage furrow during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein localization from Golgi apparatus to cleavage furrow during vegetative growth","type":"exact"},{"name":"reduced rate of protein localization from Golgi apparatus to cleavage furrow","type":"exact"}],"termid":"FYPO:0006448"}


id: FYPO:0001676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during S phase of a mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to nucleus during mitotic S phase","synonyms":[{"name":"ectopic protein localization to nucleus during mitotic S phase","type":"exact"},{"name":"protein mislocalised to nucleus during S phase during vegetative growth","type":"exact"},{"name":"protein mislocalised to nucleus during mitotic S phase","type":"exact"},{"name":"protein mislocalized to nucleus during S phase during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0001676"}


id: PBO:0088142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar RNase of the T(2) family; relocalizes to the cytosol where it cleaves tRNAs upon oxidative or stationary phase stress; required for tRNA-specific translational pausing during oxidative stress; promotes apoptosis under stress conditions and this function is independent of Rny1p catalytic activity","termid":"PBO:0088142"}


id: PBO:0063972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 6","termid":"PBO:0063972"}


id: PBO:0057301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 514a-2","termid":"PBO:0057301"}


id: PBO:0034405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_process_that_occurs_in","termid":"PBO:0034405"}


id: PBO:0030559
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_import","termid":"PBO:0030559"}


id: PBO:0024814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_regulating","termid":"PBO:0024814"}


id: PBO:0085820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed during diauxic shift and stationary phase, and negatively regulated by glucose; expression is regulated by Msn2p/Msn4p; overexpression slows down progression through meiosis and improves fermentative efficiency; YNR034W-A has a paralog, YCR075W-A, that arose from the whole genome duplication","termid":"PBO:0085820"}


id: FYECO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which uracil was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited uracil","termid":"FYECO:0000316"}


id: GO:1990777
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical particle containing non-covalently associated proteins and lipids. Examples are plasma lipoprotein particles which transport lipids in the blood or lymph.","definition_xrefs":["GOC:vesicles"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex","termid":"GO:0032994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"lipoprotein particle","termid":"GO:1990777"}


id: GO:0008755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the polymerization of o-antigen chains. O-antigens are tetra- and pentasaccharide repeat units of the cell walls of Gram-negative bacteria and are a component of lipopolysaccharide.","definition_xrefs":["GOC:jl","PMID:12045108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"O antigen polymerase activity","synonyms":[{"name":"O-antigen polymerase activity","type":"exact"}],"termid":"GO:0008755"}


id: PBO:0077620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 10 pseudogene 1","termid":"PBO:0077620"}


id: PBO:0077001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 3","termid":"PBO:0077001"}


id: GO:1905788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.","definition_xrefs":["GOC:TermGenie","PMID:8692859","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:1905787"},{"relation_name":"negatively_regulates","term_name":"detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:0050976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"down regulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"down regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"down regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"down regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"down regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"down regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"down regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"down-regulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"down-regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"down-regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"down-regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"down-regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"down-regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"down-regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"downregulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"downregulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"downregulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"downregulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"downregulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"downregulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"downregulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"inhibition of detection of mechanical stimulus involved in sensory perception of touch","type":"narrow"},{"name":"inhibition of perception of touch, detection of mechanical stimulus","type":"narrow"},{"name":"inhibition of perception of touch, sensory detection of mechanical stimulus","type":"narrow"},{"name":"inhibition of perception of touch, sensory transduction of mechanical stimulus","type":"narrow"},{"name":"inhibition of sensory detection of mechanical stimulus during perception of touch","type":"narrow"},{"name":"inhibition of sensory transduction of mechanical stimulus during perception of touch","type":"narrow"},{"name":"inhibition of tactition, sensory detection of mechanical stimulus","type":"narrow"},{"name":"negative regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"negative regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"negative regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"negative regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"negative regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"negative regulation of tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:1905788"}


id: FYPO:0007984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which equatorial microtubule organizing center (eMTOC) disassembly does not take place after cell division.","definition_xrefs":["PomBase:mlr","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"abolished eMTOC disassembly","termid":"FYPO:0007984"}


id: PBO:0012041
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lives if zapped","termid":"PBO:0012041"}


id: PATO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000223 muscle strength (obsolete PATO:0000223)","termid":"PATO:0000223"}


id: GO:0071356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor necrosis factor","termid":"GO:0034612"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tumor necrosis factor","synonyms":[{"name":"cellular response to TNF","type":"exact"}],"termid":"GO:0071356"}


id: GO:0060333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interferon-gamma binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Interferon gamma is the only member of the type II interferon found so far.","definition_xrefs":["GOC:signaling","PMID:28901902","GOC:add","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon-mediated signaling pathway","termid":"GO:0140888"},{"relation_name":"part_of","term_name":"cellular response to type II interferon","termid":"GO:0071346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"type II interferon-mediated signaling pathway","synonyms":[{"name":"gamma-interferon-mediated signaling pathway","type":"exact"},{"name":"immune interferon signaling pathway","type":"exact"},{"name":"interferon-gamma-mediated signaling pathway","type":"exact"},{"name":"interferon-gamma-mediated signalling pathway","type":"exact"},{"name":"type II IFN-mediated signaling pathway","type":"exact"}],"termid":"GO:0060333"}


id: PBO:0030875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vegetative_cell_population_growth_phenotype","termid":"PBO:0030875"}


id: PBO:0050363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 66","termid":"PBO:0050363"}


id: PBO:0054002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1327","termid":"PBO:0054002"}


id: PBO:0046070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 1","termid":"PBO:0046070"}


id: FYPO:0001602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered level of substance in vacuole","termid":"FYPO:0001601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of substance in vacuole","synonyms":[{"name":"decreased level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"decreased level of substance in vacuole during vegetative growth","type":"exact"},{"name":"decreased vacuolar level of substance","type":"exact"},{"name":"reduced level of substance in vacuole","type":"exact"}],"termid":"FYPO:0001602"}


id: PBO:0089882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix import factor Mix23","termid":"PBO:0089882"}


id: FYPO:0001864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation takes place in cells that are not subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000301"],"is_obsolete":false,"name":"mating without glucose starvation","synonyms":[{"name":"conjugation without glucose starvation","type":"exact"},{"name":"mating in the absence of glucose starvation","type":"exact"},{"name":"mating without glucose depletion","type":"exact"},{"name":"mating without glucose deprivation","type":"exact"}],"termid":"FYPO:0001864"}


id: PBO:0071169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 8","termid":"PBO:0071169"}


id: FYPO:0005811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the biogenesis of nuclear membrane that normally forms part of mitosis is abnormal.","definition_xrefs":["PomBase:mah","PMID:26869222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal nuclear membrane biogenesis involved in mitosis","synonyms":[{"name":"abnormal membrane addition to the nuclear membrane during division","type":"exact"},{"name":"abnormal nuclear membrane biogenesis involved in mitosis during vegetative growth","type":"exact"},{"name":"abnormal nuclear membrane biogenesis involved in mitotic nuclear division","type":"exact"},{"name":"abnormal nuclear membrane biogenesis involved nuclear division during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005811"}


id: PBO:0070749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 5","termid":"PBO:0070749"}


id: GO:0005579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow.","definition_xrefs":["GOC:add","ISBN:0781735149","ISBN:0198547684","ISBN:068340007X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pore complex","termid":"GO:0046930"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"membrane attack complex","secondary_identifiers":["Wikipedia:Complement_membrane_attack_complex"],"synonyms":[{"name":"MAC","type":"exact"},{"name":"TCC","type":"exact"},{"name":"membrane attack complex protein alphaM chain","type":"narrow"},{"name":"membrane attack complex protein beta2 chain","type":"narrow"},{"name":"terminal complement complex","type":"exact"}],"termid":"GO:0005579"}


id: PBO:0073686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signaling threshold regulating transmembrane adaptor 1","termid":"PBO:0073686"}


id: PBO:0051123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-1 (pseudogene)","termid":"PBO:0051123"}


id: GO:0032162
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septin band, i.e. a diffuse ring composed of a series of septin bars running parallel to the long axis of the cell, located at the neck of a shmoo (mating projection).","definition_xrefs":["GOC:krc","PMID:16151244","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin band","termid":"GO:0032158"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection septin band","termid":"GO:0032162"}


id: PBO:0028607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation_during_vegetative_growth","termid":"PBO:0028607"}


id: PBO:0034596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_topoisomerase-DNA_adduct_level","termid":"PBO:0034596"}


id: PBO:0002350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol-4-phosphate 5-kinase Its3","termid":"PBO:0002350"}


id: FYPO:0004544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is longer than normal. Heterochromatin maintenance is the process that preserves heterochromatin in a stable functional or structural state.","definition_xrefs":["PomBase:mah","GO:0070829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of heterochromatin maintenance","synonyms":[{"name":"increased duration of heterochromatin maintenance during mitotic cell cycle","type":"related"},{"name":"increased duration of heterochromatin maintenance during vegetative growth","type":"exact"},{"name":"prolonged heterochromatin maintenance","type":"exact"}],"termid":"FYPO:0004544"}


id: PBO:0041875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic arginine sensor for mTORC1 subunit 2","termid":"PBO:0041875"}


id: GO:0052498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent induction by organism of symbiont innate immunity (obsolete GO:0052498)","synonyms":[{"name":"MAMP dependent activation of symbiont innate immunity","type":"exact"},{"name":"MAMP dependent induction of symbiont innate immunity","type":"exact"},{"name":"PAMP dependent activation of symbiont innate immunity","type":"exact"},{"name":"PAMP dependent induction of symbiont innate immunity","type":"exact"},{"name":"general elicitor-dependent activation of symbiont innate immunity","type":"exact"},{"name":"general elicitor-dependent induction of symbiont innate immunity","type":"exact"},{"name":"pathogen-associated molecular pattern dependent activation by organism of symbiont innate immunity","type":"exact"},{"name":"pathogen-associated molecular pattern dependent induction by organism of symbiont innate immunity","type":"exact"}],"termid":"GO:0052498"}


id: GO:0033736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + H2O + O2 = allysine + H2O2 + NH4.","definition_xrefs":["RHEA:22548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-lysine 6-oxidase activity","secondary_identifiers":["EC:1.4.3.20","MetaCyc:1.4.3.20-RXN","KEGG_REACTION:R07598"],"synonyms":[{"name":"L-lysine-epsilon-oxidase activity","type":"related"},{"name":"L-lysine:oxygen 6-oxidoreductase (deaminating) activity","type":"related"},{"name":"Lod","type":"related"},{"name":"LodA","type":"related"},{"name":"marinocine","type":"related"}],"termid":"GO:0033736"}


id: PBO:0057709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1295b","termid":"PBO:0057709"}


id: PBO:0089365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar zinc exporter, ZIP family, Zip2","termid":"PBO:0089365"}


id: PBO:0061068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB activating protein like","termid":"PBO:0061068"}


id: SO:0001439
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons CCN (CCT, CCC, CCA and CCG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline","synonyms":[{"name":"P","type":"exact"},{"name":"Pro","type":"exact"}],"termid":"SO:0001439"}


id: GO:0003093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glomerular filtration. Glomerular filtration is the process in which blood is filtered by the glomerulus into the renal tubule.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of blood volume","termid":"GO:0001977"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"glomerular filtration","termid":"GO:0003094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glomerular filtration","termid":"GO:0003093"}


id: GO:0052503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the symbiont calcium-dependent protein kinase pathway during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont calcium-dependent protein kinase pathway (obsolete GO:0052503)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont calcium-dependent protein kinase pathway","type":"exact"},{"name":"positive regulation of defense-related symbiont CDPK pathway by organism","type":"exact"}],"termid":"GO:0052503"}


id: GO:0061371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the heart with respect to the left and right halves of the organism.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of heart left/right asymmetry","synonyms":[{"name":"determination of cardiac left/right asymmetry","type":"exact"}],"termid":"GO:0061371"}


id: GO:0004828
data:
  {"annotated_genes":["SJAG_02977","SJAG_04762"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90796,91566],"is_not":false,"summary":null,"term":"GO:0004828"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-serine + tRNA(Ser) = AMP + diphosphate + L-seryl-tRNA(Ser).","definition_xrefs":["EC:6.1.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02977":null,"SJAG_04762":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0140101","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"serine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SERINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379992","RHEA:12292","Reactome:R-HSA-380239"],"synonyms":[{"name":"L-serine:tRNASer ligase (AMP-forming)","type":"related"},{"name":"SerRS activity","type":"related"},{"name":"serine translase activity","type":"related"},{"name":"seryl-tRNA synthetase activity","type":"exact"},{"name":"seryl-transfer RNA synthetase activity","type":"related"},{"name":"seryl-transfer ribonucleate synthetase activity","type":"related"},{"name":"seryl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004828","terms_by_termid":{"GO:0004828":null}}


id: PBO:0044330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 11","termid":"PBO:0044330"}


id: PBO:0074859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 45C","termid":"PBO:0074859"}


id: FYPO:0001004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells to resume growth normally upon exiting G0 phase.","definition_xrefs":["PomBase:mah","PMID:19366728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable upon G0 to G1 transition","termid":"FYPO:0001004"}


id: GO:1905478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glutamate-ammonia ligase activity.","definition_xrefs":["GOC:TermGenie","PMID:10377385","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glutamate-ammonia ligase activity (obsolete GO:1905478)","synonyms":[{"name":"regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"regulation of L-glutamine synthetase activity","type":"exact"},{"name":"regulation of glutamine synthetase activity","type":"exact"},{"name":"regulation of glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"GO:1905478"}


id: PBO:0085222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pantothenate kinase, ATP:D-pantothenate 4'-phosphotransferase; catalyzes the first committed step in the universal biosynthetic pathway for synthesis of coenzyme A (CoA); transcriptionally regulated by Upc2p via a sterol response element","termid":"PBO:0085222"}


id: PBO:0004785
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by osmotic stress","termid":"PBO:0004785"}


id: GO:1902344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltose transport.","definition_xrefs":["PMID:23770568","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of maltose transport","termid":"GO:1902343"},{"relation_name":"negatively_regulates","term_name":"maltose transport","termid":"GO:0015768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of maltose transport","synonyms":[{"name":"down regulation of maltose transport","type":"exact"},{"name":"down-regulation of maltose transport","type":"exact"},{"name":"downregulation of maltose transport","type":"exact"},{"name":"inhibition of maltose transport","type":"narrow"}],"termid":"GO:1902344"}


id: PBO:0074782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 4A","termid":"PBO:0074782"}


id: GO:0060485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesenchymal tissue over time, from its formation to the mature structure. A mesenchymal tissue is made up of loosely packed stellate cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme development","synonyms":[{"name":"mesenchymal development","type":"exact"}],"termid":"GO:0060485"}


id: FYPO:0007577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to actin cytoskeleton","synonyms":[{"name":"abnormal protein localisation to actin cytoskeleton","type":"exact"}],"termid":"FYPO:0007577"}


id: PBO:0091293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA initiator Methionine","termid":"PBO:0091293"}


id: PBO:0083063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroorotase; catalyzes the third enzymatic step in the de novo biosynthesis of pyrimidines, converting carbamoyl-L-aspartate into dihydroorotate","termid":"PBO:0083063"}


id: PBO:0084105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Haploid specific endoprotease of a-factor mating pheromone; performs one of two N-terminal cleavages during maturation of a-factor mating pheromone; required for axial budding pattern of haploid cells","termid":"PBO:0084105"}


id: PBO:0063940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl cis/trans isomerase, NIMA-interacting 1","termid":"PBO:0063940"}


id: PBO:0067570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 725, pseudogene","termid":"PBO:0067570"}


id: PBO:0063987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 21","termid":"PBO:0063987"}


id: PBO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.1.1","termid":"PBO:0000106"}


id: PBO:0000742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding TFAR19-related protein (predicted)","termid":"PBO:0000742"}


id: PBO:0031005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level","termid":"PBO:0031005"}


id: GO:0050835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"},{"relation_name":"is_a","term_name":"S-adenosylmethionine catabolic process","termid":"GO:0050843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044248","GO:0044085","GO:0006790"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide","termid":"GO:0050835"}


id: MOD:00305
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts six L-cysteine residues, an L-serine residue and a eight-iron seven-sulfur cluster to hexakis-L-cysteinyl L-serinyl octairon heptasulfide.","definition_xrefs":["PubMed:9063865","PubMed:12215645","RESID:AA0300","PubMed:10525412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexakis-L-cysteinyl L-serinyl octairon heptasulfide","synonyms":[{"name":"Cys6Ser-[8Fe7S]","type":"exact"},{"name":"METAL Iron-sulfur (8Fe-7S)","type":"exact"},{"name":"hexakis-L-cysteinyl L-serinyl octairon heptasulfide","type":"exact"},{"name":"nitrogenase P-cluster","type":"exact"}],"termid":"MOD:00305"}


id: PBO:0054582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1985","termid":"PBO:0054582"}


id: FYPO:0003626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to shmoo tip","synonyms":[{"name":"normal protein localisation to shmoo tip","type":"exact"},{"name":"normal protein localization to mating projection tip","type":"exact"},{"name":"normal protein localization to shmoo projection","type":"exact"}],"termid":"FYPO:0003626"}


id: PBO:0078749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 10C, mitochondrial RNase P subunit","termid":"PBO:0078749"}


id: GO:0002195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involved in the biosynthesis of 2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine (ms2io6A), a modified nucleoside present in position 37 (adjacent to and 3' of the anticodon) of tRNAs.","definition_xrefs":["UniPathway:UPA00729"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine-tRNA biosynthesis (obsolete GO:0002195)","termid":"GO:0002195"}


id: GO:0051437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the rate of ubiquitin ligase activity that contributes to the regulation of the mitotic cell cycle phase transition.","definition_xrefs":["GOC:ai","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition (obsolete GO:0051437)","synonyms":[{"name":"activation of ubiquitin ligase activity during mitotic cell cycle","type":"narrow"},{"name":"mitotic SCF complex activator","type":"narrow"},{"name":"mitotic ubiquitin ligase activator","type":"narrow"},{"name":"positive regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle","type":"related"},{"name":"stimulation of ubiquitin ligase activity during mitotic cell cycle","type":"narrow"},{"name":"up regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"up-regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"upregulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"}],"termid":"GO:0051437"}


id: PBO:0083257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; large scale expression analysis showed an increase in mRNA accumulation in strains mutant for exosome components","termid":"PBO:0083257"}


id: GO:0034370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a triglyceride-rich lipoprotein particle, including the hydrolysis of triglyceride by lipoprotein lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride from a triglyceride-rich lipoprotein particle.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:rl","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"triglyceride-rich lipoprotein particle remodeling","synonyms":[{"name":"triacylglycerol-rich lipoprotein particle remodeling","type":"exact"},{"name":"triacylglycerol-rich lipoprotein particle remodelling","type":"exact"},{"name":"triglyceride-rich lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0034370"}


id: PBO:0041934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 2","termid":"PBO:0041934"}


id: GO:0004229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of gelatin types I and V and collagen types IV and V.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gelatinase B activity (obsolete GO:0004229)","synonyms":[{"name":"92-kDa gelatinase activity","type":"narrow"},{"name":"92-kDa type IV collagenase activity","type":"narrow"},{"name":"95 kDa type IV collagenase/gelatinase activity","type":"related"},{"name":"MMP 9","type":"related"},{"name":"MMP-9","type":"exact"},{"name":"collagenase IV","type":"related"},{"name":"collagenase type IV","type":"related"},{"name":"gelatinase B activity","type":"exact"},{"name":"gelatinase MMP 9","type":"related"},{"name":"macrophage gelatinase activity","type":"narrow"},{"name":"matrix metalloproteinase 9 activity","type":"related"},{"name":"type IV collagen metalloproteinase","type":"broad"},{"name":"type V collagenase activity","type":"related"}],"termid":"GO:0004229"}


id: PATO:0002169
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being split along the median axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split","termid":"PATO:0001786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split medially","termid":"PATO:0002169"}


id: GO:0140772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + hexadecanoyl-CoA = CoA + H+ + N(6)-hexadecanoyl-L-lysyl-[protein].","definition_xrefs":["PMID:30061757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0018031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"CoA-dependent peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0140772"}


id: PBO:0050096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 6","termid":"PBO:0050096"}


id: GO:0032290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the wraps of cell membrane that constitute myelin are laid down around an axon by Schwann cells in the peripheral nervous system.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin assembly","termid":"GO:0032288"},{"relation_name":"part_of","term_name":"myelination in peripheral nervous system","termid":"GO:0022011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system myelin formation","synonyms":[{"name":"myelin formation in peripheral nervous system","type":"exact"},{"name":"peripheral nervous system myelin sheath formation","type":"exact"}],"termid":"GO:0032290"}


id: PBO:0086837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein predicted to have carbon-sulfur lyase activity; transcriptionally regulated by Upc2p via an upstream sterol response element; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and the cytoplasm; not an essential gene; YML082W has a paralog, STR2, that arose from the whole genome duplication","termid":"PBO:0086837"}


id: PBO:0005574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf14","termid":"PBO:0005574"}


id: PBO:0066914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 216","termid":"PBO:0066914"}


id: GO:0048011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by neurotrophin binding to its receptor on the surface of a target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","Wikipedia:Trk_receptor","GOC:jc","PMID:12065629","GOC:signaling","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"is_a","term_name":"neurotrophin signaling pathway","termid":"GO:0038179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neurotrophin TRK receptor signaling pathway","synonyms":[{"name":"TrkA signaling pathway","type":"narrow"},{"name":"TrkB signaling pathway","type":"narrow"},{"name":"TrkC signaling pathway","type":"narrow"},{"name":"tropomyosin-receptor-kinase signaling","type":"exact"}],"termid":"GO:0048011"}


id: PBO:0004246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit Cut14","termid":"PBO:0004246"}


id: PBO:0024822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf3 (predicted)","termid":"PBO:0024822"}


id: PBO:0076974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 5","termid":"PBO:0076974"}


id: GO:1900601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of endocrocin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"endocrocin metabolic process","termid":"GO:1900600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"endocrocin catabolic process","synonyms":[{"name":"endocrocin breakdown","type":"exact"},{"name":"endocrocin catabolism","type":"exact"},{"name":"endocrocin degradation","type":"exact"}],"termid":"GO:1900601"}


id: GO:0030143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle that mediates transport of cargo within the Golgi complex (for example, between cisternae of the Golgi stack).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"COPI-coated vesicle","termid":"GO:0030137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"COPI-coated inter-Golgi transport vesicle","secondary_identifiers":["NIF_Subcellular:sao1382918459","GO:0005807"],"synonyms":[{"name":"inter-Golgi transport constitutive secretory pathway transport vesicle","type":"exact"}],"termid":"GO:0030143"}


id: PBO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthine phosphoribosyltransferase (predicted)","termid":"PBO:0001377"}


id: PR:Q9Y7X8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03309","PANTHER:PTHR11937:SF16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein arp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.10","secondary_identifiers":["UniProtKB:Q9Y7X8"],"synonyms":[{"name":"Spom972h-ACTR5","type":"exact"}],"termid":"PR:Q9Y7X8"}


id: PR:O74833
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA ligase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10459:SF7","OMA:SCHPO04379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.05c","secondary_identifiers":["UniProtKB:O74833"],"synonyms":[{"name":"DNA ligase IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LIG4","type":"exact"},{"name":"polydeoxyribonucleotide synthase [ATP] 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74833"}


id: PBO:0029662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_endodeoxyribonuclease_activity","termid":"PBO:0029662"}


id: GO:0019162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxaloacetate + pyridoxamine = L-aspartate + pyridoxal.","definition_xrefs":["RHEA:10844","EC:2.6.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyridoxamine-oxaloacetate transaminase activity","secondary_identifiers":["KEGG_REACTION:R01713","MetaCyc:PYROXALTRANSAM-RXN"],"synonyms":[{"name":"pyridoxamine--oxaloacetate aminotransferase activity","type":"related"},{"name":"pyridoxamine-oxaloacetate aminotransferase activity","type":"exact"},{"name":"pyridoxamine:oxaloacetate aminotransferase activity","type":"related"}],"termid":"GO:0019162"}


id: PBO:0026700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_glutamine_nitrogen_source","termid":"PBO:0026700"}


id: GO:0106070
data:
  {"annotated_genes":["SJAG_02311","SJAG_02481","SJAG_01245","SJAG_00266","SJAG_02426"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106072"},{"annotations":[96559,88215,104076,88868,112491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an adenylate cyclase-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["PMID:19246489","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of adenylate cyclase-activating G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0106070","terms_by_termid":{"GO:0106072":null,"GO:0110034":null}}


id: PBO:0079910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UQCRFS1 divergent transcript","termid":"PBO:0079910"}


id: FYPO:0002353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is decreased. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"},{"relation_name":"is_a","term_name":"decreased gene silencing","termid":"FYPO:0000576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin silencing","synonyms":[{"name":"decreased chromatin silencing during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing during vegetative growth","type":"exact"},{"name":"reduced chromatin silencing","type":"exact"}],"termid":"FYPO:0002353"}


id: PBO:0029496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromosome_disjunction_at_meiosis_I","termid":"PBO:0029496"}


id: PBO:0056221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member D1","termid":"PBO:0056221"}


id: FYPO:0003355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize sulfur-containing amino acids, and therefore requires one or more sulfur-containing amino acids (e.g. cysteine or methionine) in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for sulfur-containing amino acid","synonyms":[{"name":"growth auxotrophic for sulfur-containing amino acid during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for sulfur-containing amino acid during vegetative growth","type":"exact"},{"name":"growth auxotrophic for sulphur-containing amino acid","type":"exact"},{"name":"sulfur-containing amino acid auxotrophy","type":"exact"}],"termid":"FYPO:0003355"}


id: PBO:0070726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 31","termid":"PBO:0070726"}


id: PBO:0028581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclease_activity","termid":"PBO:0028581"}


id: PBO:0070940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 48","termid":"PBO:0070940"}


id: PBO:0075235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 7","termid":"PBO:0075235"}


id: GO:0044197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Rel Homology Domain (RHD) of a protein. The RHD is found in a family of eukaryotic transcription factors, which includes NF-kappaB, Dorsal, Relish and NFAT.","definition_xrefs":["InterPro:IPR011539","Wikipedia:Rel_homology_domain"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"Rel homology domain binding","synonyms":[{"name":"RHD binding","type":"exact"}],"termid":"GO:0044197"}


id: GO:0036463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) and transmitting the signal from one side of the plasma membrane to the other to initiate apoptotic cell death.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death receptor activity","termid":"GO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"TRAIL receptor activity","synonyms":[{"name":"tumor necrosis factor-related apoptosis-inducing ligand receptor","type":"exact"}],"termid":"GO:0036463"}


id: PBO:0088091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glycosyltransferase subunit of the GPI-GnT complex; UDP-GlcNAc-binding and catalytic subunit of the enzyme that mediates the first step in glycosylphosphatidylinositol (GPI) biosynthesis, mutations cause defects in transcription and in biogenesis of cell wall proteins","termid":"PBO:0088091"}


id: GO:0034709
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large (20 S) protein complex that possesses protein arginine methyltransferase activity and modifies specific arginines to dimethylarginines in the arginine- and glycine-rich domains of several spliceosomal Sm proteins, thereby targeting these proteins to the survival of motor neurons (SMN) complex for assembly into small nuclear ribonucleoprotein (snRNP) core particles. Proteins found in the methylosome include the methyltransferase JBP1 (PRMT5), pICln (CLNS1A), MEP50 (WDR77), and unmethylated forms of SM proteins that have RG domains.","definition_xrefs":["PMID:11713266","PMID:11756452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methylosome","synonyms":[{"name":"20S methylosome","type":"exact"},{"name":"20S methyltransferase complex","type":"exact"}],"termid":"GO:0034709"}


id: PBO:0000319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-ribosomal protein Loc1 (predicted)","termid":"PBO:0000319"}


id: PBO:0034616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_recombination_double-strand_break_repair","termid":"PBO:0034616"}


id: GO:0051987
data:
  {"annotated_genes":["SJAG_03126","SJAG_04280","SJAG_01837","SJAG_04140","SJAG_05290","SJAG_01805","SJAG_03048","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101276,108070,112114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[107308,98503,86154,89933,112786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chromosome segregation","termid":"GO:0051984"},{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"positively_regulates","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of attachment of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"stimulation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"up regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore","type":"exact"}],"termid":"GO:0051987","terms_by_termid":{"GO:0140429":null,"GO:1902425":null}}


id: PBO:0081915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 884, pseudogene","termid":"PBO:0081915"}


id: GO:0098552
data:
  {"annotated_genes":["SJAG_00605","SJAG_04666","SJAG_00948","SJAG_01134","SJAG_05272","SJAG_02605","SJAG_00254","SJAG_02444","SJAG_01738","SJAG_03596","SJAG_00797","SJAG_01774","SJAG_02093","SJAG_02435","SJAG_04209","SJAG_00218","SJAG_03345","SJAG_01835","SJAG_04018","SJAG_03282","SJAG_01114","SJAG_02916","SJAG_02196","SJAG_00415","SJAG_04026","SJAG_03204","SJAG_01249","SJAG_01242","SJAG_00077","SJAG_04077","SJAG_03081","SJAG_01290","SJAG_01029","SJAG_02260","SJAG_02102","SJAG_01307","SJAG_00368","SJAG_02587","SJAG_04483","SJAG_04509","SJAG_00784","SJAG_04238","SJAG_00340","SJAG_05268","SJAG_00852","SJAG_03640","SJAG_05207","SJAG_02989","SJAG_00310","SJAG_04850","SJAG_02392","SJAG_02173","SJAG_04789","SJAG_04875","SJAG_04583","SJAG_03464","SJAG_01806","SJAG_04685","SJAG_01086","SJAG_04363","SJAG_00109","SJAG_04732","SJAG_04851","SJAG_00096","SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84242,105411],"is_not":false,"summary":null,"term":"GO:0098552"},{"annotations":[105957,90022,90843,101935,91208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[86722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[96638,85407,111866,95376,100915,102691,98623,100573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[95096,98540,88532,99844,102692,106971,103144,88697,84125,84055,85883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[102693,91972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[103886,109850,98368,110580,111697,90978,86077,98367,110480,109146,88004,113860,102662,90979,91405,113429,86271,90977,114406,98360,114839,110859,90965,87707,100115,90178,96928,112378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009897"},{"annotations":[106649],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[99881,96573],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[102592,103238,90354,105122],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"},{"annotations":[90845,95898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098553"},{"annotations":[86112,85644,89941,92379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099617"}]},"cv_name":"cellular_component","definition":"A cellular component consisting of one leaflet of a membrane bilayer and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane","termid":"GO:0016020"}],"gene_count":65,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00096":null,"SJAG_00109":null,"SJAG_00218":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00368":null,"SJAG_00415":null,"SJAG_00605":null,"SJAG_00784":null,"SJAG_00797":null,"SJAG_00852":null,"SJAG_00948":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01114":null,"SJAG_01134":null,"SJAG_01242":null,"SJAG_01249":null,"SJAG_01290":null,"SJAG_01307":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_01806":null,"SJAG_01835":null,"SJAG_02093":null,"SJAG_02102":null,"SJAG_02173":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02260":null,"SJAG_02392":null,"SJAG_02435":null,"SJAG_02444":null,"SJAG_02587":null,"SJAG_02605":null,"SJAG_02916":null,"SJAG_02989":null,"SJAG_03081":null,"SJAG_03204":null,"SJAG_03282":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_03640":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04363":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04583":null,"SJAG_04666":null,"SJAG_04685":null,"SJAG_04732":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04875":null,"SJAG_05207":null,"SJAG_05268":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"side of membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098552","terms_by_termid":{"GO:0005834":null,"GO:0009897":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098552":null,"GO:0098553":null,"GO:0098554":null,"GO:0099616":null,"GO:0099617":null,"GO:0106186":null}}


id: GO:0005710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during metaphase. Typically, sister chromatids are held together at their centromeres and chromosomes are covered with a large number of molecules, including ribonucleoproteins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete metaphase chromosome (obsolete GO:0005710)","synonyms":[{"name":"metaphase chromosome","type":"exact"}],"termid":"GO:0005710"}


id: GO:0089719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RHG (reaper/hid/grimm) domain/motif (AKA iap binding motif).","definition_xrefs":["GOC:ha","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"RHG protein domain binding","synonyms":[{"name":"RHG domain binding","type":"exact"},{"name":"iap binding domain binding","type":"exact"},{"name":"inhibitor of apoptosis binding domain binding","type":"exact"},{"name":"reaper hid grim domain binding","type":"exact"}],"termid":"GO:0089719"}


id: GO:0015517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: galactose(out) + H+(out) = galactose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.1","TC:2.A.1.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transporter activity","termid":"GO:0005354"},{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"galactose:proton symporter activity","synonyms":[{"name":"galactose:hydrogen symporter activity","type":"exact"},{"name":"lactose, galactose:hydrogen symporter activity","type":"broad"}],"termid":"GO:0015517"}


id: GO:0009674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Na+(out) = K+(in) + Na+(in).","definition_xrefs":["TC:2.A.38.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"potassium:sodium symporter activity","synonyms":[{"name":"high affinity potassium transporter","type":"related"}],"termid":"GO:0009674"}


id: PBO:0029651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_nucleus","termid":"PBO:0029651"}


id: PBO:0086497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pimeloyl-CoA synthetase involved in biotin biosynthesis; in S. cerevisiae strains YJM627 and A364a; highly degraded pseudogenic copy of BIO1/YAR070W-A, which is a paralog of YJR154W","termid":"PBO:0086497"}


id: FYPO:0002215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"viable curved elongated vegetative cell","synonyms":[{"name":"curved elongated viable cell","type":"exact"},{"name":"viable curved elongated cell","type":"exact"},{"name":"viable curved elongated cell during vegetative growth","type":"exact"},{"name":"viable curved elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002215"}


id: GO:0075109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont alters or subverts a receptor-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","synonyms":[{"name":"perturbation of host receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075109"}


id: PBO:0060654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 3","termid":"PBO:0060654"}


id: GO:0010979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of vitamin D 24-hydroxylase activity. Vitamin D 24-hydroxylase activity catalyzes the hydroxylation of C-24 of any form of vitamin D.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monooxygenase activity","termid":"GO:0032768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vitamin D 24-hydroxylase activity","termid":"GO:0010979"}


id: GO:0042663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into an endoderm cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of endodermal cell differentiation","termid":"GO:1903224"},{"relation_name":"regulates","term_name":"endodermal cell fate specification","termid":"GO:0001714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endodermal cell fate specification","synonyms":[{"name":"regulation of endoderm cell fate specification","type":"exact"}],"termid":"GO:0042663"}


id: GO:0005920
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septate junction that lacks the regular arrays of electron-dense septae found in pleated septate junctions.","definition_xrefs":["PMID:11700298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septate junction","termid":"GO:0005918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"smooth septate junction","synonyms":[{"name":"zonula continua","type":"exact"}],"termid":"GO:0005920"}


id: FYPO:0002509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification","termid":"FYPO:0002499"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased protein palmitoylation","termid":"FYPO:0002509"}


id: GO:1900590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of violaceol I.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"violaceol I metabolic process","termid":"GO:1900588"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"violaceol I biosynthetic process","synonyms":[{"name":"violaceol I anabolism","type":"exact"},{"name":"violaceol I biosynthesis","type":"exact"},{"name":"violaceol I formation","type":"exact"},{"name":"violaceol I synthesis","type":"exact"}],"termid":"GO:1900590"}


id: FYPO:0001233
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[115464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount, distribution, composition or morphology of a cell part is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal subcellular component","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_03250"],"single_locus_genotype_uniquenames":["ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta"],"synonyms":[{"name":"normal subcellular structure","type":"related"}],"termid":"FYPO:0001233","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: GO:0039644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces a host NF-kappaB cascade.","definition_xrefs":["PMID:25275128","PMID:10920188"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host NF-kappaB cascade (obsolete GO:0039644)","synonyms":[{"name":"inhibition of host NF-kappa-B by virus","type":"exact"},{"name":"suppression by virus of host NF-kappaB transcription factor activity","type":"related"}],"termid":"GO:0039644"}


id: PBO:0078390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-5","termid":"PBO:0078390"}


id: GO:1901299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide-mediated programmed cell death.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901298"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide-mediated programmed cell death","synonyms":[{"name":"down regulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"down-regulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"downregulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"inhibition of hydrogen peroxide-mediated programmed cell death","type":"narrow"}],"termid":"GO:1901299"}


id: PBO:0049324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIA subunit 1 like","termid":"PBO:0049324"}


id: PBO:0091835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix protein, YjgF family protein Mmf1, reactive intermediate imine deaminase A homolog Mmf1","termid":"PBO:0091835"}


id: GO:0030952
data:
  {"annotated_genes":["SJAG_01613","SJAG_00152","SJAG_00229","SJAG_04461","SJAG_03540","SJAG_02624","SJAG_02838","SJAG_00030","SJAG_02392","SJAG_03748","SJAG_00661","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97388],"is_not":false,"summary":null,"term":"GO:0030952"},{"annotations":[96292,100751,85591,91978,101454,106873,84640,95443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030950"},{"annotations":[114734,114219,95340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030951"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00229":null,"SJAG_00424":null,"SJAG_00661":null,"SJAG_01613":null,"SJAG_02392":null,"SJAG_02624":null,"SJAG_02838":null,"SJAG_03540":null,"SJAG_03748":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"establishment or maintenance of cytoskeleton polarity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoskeleton polarization","type":"related"}],"termid":"GO:0030952","terms_by_termid":{"GO:0030950":null,"GO:0030951":null,"GO:0030952":null}}


id: PBO:0001043
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pop-Interacting Protein","termid":"PBO:0001043"}


id: PBO:0051146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-25 (pseudogene)","termid":"PBO:0051146"}


id: PBO:0046228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 21","termid":"PBO:0046228"}


id: GO:0018147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a protein via L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["RESID:AA0248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum incorporation into molybdenum-molybdopterin complex","termid":"GO:0018315"},{"relation_name":"is_a","term_name":"peptidyl-selenocysteine modification","termid":"GO:0050844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation via L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","termid":"GO:0018147"}


id: PR:Q9P7Q1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.02c","synonyms":[{"name":"Spom972h-SPAC186.02c","type":"exact"}],"termid":"PR:Q9P7Q1"}


id: PBO:0004378
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.3.1","termid":"PBO:0004378"}


id: PBO:0085256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein required for autophagy and CVT; required for cytoplasm-to-vacuole targeting (Cvt) pathway and efficient macroautophagy; cycles between the phagophore assembly site (PAS) and non-PAS locations; forms a complex with Atg9p and Atg27p","termid":"PBO:0085256"}


id: GO:1903627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of dUTP diphosphatase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:1315924"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of dUTP diphosphatase activity (obsolete GO:1903627)","synonyms":[{"name":"regulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"regulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"regulation of dUTPase activity","type":"exact"},{"name":"regulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"regulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"regulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"}],"termid":"GO:1903627"}


id: PBO:0076469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport and golgi organization 2 homolog","termid":"PBO:0076469"}


id: PBO:0017054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 nucleotide exchange factor Fes1 (predicted)","termid":"PBO:0017054"}


id: PBO:0080164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge Y-linked 1B","termid":"PBO:0080164"}


id: GO:0004460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + 2 [Fe(III)cytochrome c] = 2 [Fe(II)cytochrome c] + 2 H+ + pyruvate.","definition_xrefs":["RHEA:19909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate dehydrogenase activity","termid":"GO:0004457"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-lactate dehydrogenase (cytochrome) activity","secondary_identifiers":["MetaCyc:L-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN","EC:1.1.2.3"],"synonyms":[{"name":"(S)-lactate:ferricytochrome-c 2-oxidoreductase activity","type":"related"},{"name":"L(+)-lactate:cytochrome c oxidoreductase activity","type":"related"},{"name":"L-lactate cytochrome c oxidoreductase activity","type":"related"},{"name":"L-lactate cytochrome c reductase activity","type":"related"},{"name":"L-lactate ferricytochrome c oxidoreductase activity","type":"related"},{"name":"cytochrome b2","type":"related"},{"name":"cytochrome b2 (flavin-free derivative of flavocytochrome b2)","type":"related"},{"name":"dehydrogenase, lactate (cytochrome)","type":"related"},{"name":"flavocytochrome b2","type":"related"},{"name":"lactate dehydrogenase (cytochrome)","type":"related"},{"name":"lactic acid dehydrogenase activity","type":"broad"},{"name":"lactic cytochrome c reductase activity","type":"related"}],"termid":"GO:0004460"}


id: PBO:0077704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin I1, slow skeletal type","termid":"PBO:0077704"}


id: SO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified DNA cytosine base feature, modified by a carboxy group at the 5 carbon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytosine","termid":"SO:0001963"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_carboxylcytosine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"5-caC","type":"exact"},{"name":"5-carboxycytosine","type":"exact"}],"termid":"SO:0001966"}


id: PR:O42975
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nrl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein NRDE2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.05","synonyms":[{"name":"Spom972h-nrl1","type":"exact"}],"termid":"PR:O42975"}


id: PBO:0080248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 11, pseudogene","termid":"PBO:0080248"}


id: GO:0048851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hypophysis are generated and organized. The hypophysis is an endocrine gland that secretes hormones that regulate many other glands.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hypophysis morphogenesis","termid":"GO:0048850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypophysis formation","synonyms":[{"name":"hypophysis biosynthesis","type":"exact"},{"name":"pituitary gland biosynthesis","type":"exact"},{"name":"pituitary gland formation","type":"exact"}],"termid":"GO:0048851"}


id: PBO:0016071
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe mPR1","termid":"PBO:0016071"}


id: PATO:0005024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed along the longitudinal or anterior-posterior axis.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longitudinal orientation","termid":"PATO:0005024"}


id: PBO:0052005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"joining chain of multimeric IgA and IgM pseudogene 1","termid":"PBO:0052005"}


id: GO:0071536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a RING-like zinc finger domain interaction.","definition_xrefs":["InterPro:IPR014857","GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete RING-like zinc finger domain-mediated complex assembly (obsolete GO:0071536)","synonyms":[{"name":"RING-like domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071536"}


id: GO:0090627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a plant epidermal cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant epidermal cell differentiation","termid":"GO:0090627"}


id: GO:0098026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The internal tube of the contractile tails of some viruses. The virus tail tube is the channel for DNA ejection into the host cytoplasm.","definition_xrefs":["GOC:bm","VZ:3960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, tube","synonyms":[{"name":"bacteriophage tail tube","type":"narrow"}],"termid":"GO:0098026"}


id: PBO:0042733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein K","termid":"PBO:0042733"}


id: FYPO:0003599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0034472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal snRNA 3'-end processing","synonyms":[{"name":"normal snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"normal snRNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0003599"}


id: GO:1903520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mammary gland involution.","definition_xrefs":["GO_REF:0000058","GOC:dph","GOC:TermGenie","PMID:23164222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of mammary gland involution","termid":"GO:1903519"},{"relation_name":"negatively_regulates","term_name":"mammary gland involution","termid":"GO:0060056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mammary gland involution","synonyms":[{"name":"down regulation of mammary gland involution","type":"exact"},{"name":"down-regulation of mammary gland involution","type":"exact"},{"name":"downregulation of mammary gland involution","type":"exact"},{"name":"inhibition of mammary gland involution","type":"narrow"}],"termid":"GO:1903520"}


id: PBO:0043380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 10","termid":"PBO:0043380"}


id: PBO:0084611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YKR099C-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YKR100C","termid":"PBO:0084611"}


id: GO:0009457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A group of small electron carriers, characteristic of anaerobic bacteria, photosynthetic bacteria, cyanobacteria and eukaryotic algae. Contain flavin mononucleotide.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete flavodoxin (obsolete GO:0009457)","synonyms":[{"name":"flavodoxin","type":"exact"}],"termid":"GO:0009457"}


id: PBO:0028498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ribosome_binding","termid":"PBO:0028498"}


id: GO:0102311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeraniol + 2 NADP = (6E)-8-oxogeranial + 2 NADPH + 2 H+.","definition_xrefs":["EC:1.1.1.324","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"8-hydroxygeraniol dehydrogenase activity","secondary_identifiers":["RHEA:32659","MetaCyc:RXN-12961"],"termid":"GO:0102311"}


id: PBO:0048480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCNT2 pseudogene 1","termid":"PBO:0048480"}


id: FYPO:0007393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum with both ends at the cell tip(s). The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:32101481","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized, misoriented septum","termid":"FYPO:0003210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"septum mislocalized to cell tip","synonyms":[{"name":"septum mislocalized to cell tip during mitotic cell cycle","type":"related"},{"name":"septum mislocalized to cell tip during vegetative growth","type":"exact"},{"name":"tip septation","type":"exact"}],"termid":"FYPO:0007393"}


id: GO:2000948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xyloglucan metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"xyloglucan metabolic process","termid":"GO:0010411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of xyloglucan metabolic process","synonyms":[{"name":"regulation of xyloglucan metabolism","type":"exact"}],"termid":"GO:2000948"}


id: GO:0035464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway that is involved in the determination of organismal asymmetry with regard to its left and right halves.","definition_xrefs":["GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor receptor beta signaling pathway involved in determination of left/right asymmetry (obsolete GO:0035464)","synonyms":[{"name":"regulation of TGF-beta receptor signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of TGF-beta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of transforming growth factor beta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"}],"termid":"GO:0035464"}


id: GO:0010964
data:
  {"annotated_genes":["SJAG_03664","SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113836],"is_not":false,"summary":null,"term":"GO:0010964"},{"annotations":[104598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of small non-coding RNA-mediated heterochromatin formation.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"regulates","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03664":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of regulatory ncRNA-mediated heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of RNAi-mediated heterochromatin assembly","type":"exact"},{"name":"regulation of chromatin silencing by small RNA","type":"narrow"},{"name":"regulation of heterochromatin assembly by small RNA","type":"narrow"},{"name":"regulation of ncRNA-mediated heterochromatin formation","type":"exact"},{"name":"regulation of small non-coding RNA-mediated heterochromatin formation","type":"narrow"}],"termid":"GO:0010964","terms_by_termid":{"GO:0010964":null,"GO:0060906":null}}


id: GO:0047351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 GTP + H+ = P(1),P(4)-bis(5'-guanosyl) tetraphosphate + diphosphate + H+.","definition_xrefs":["RHEA:18153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"GTP guanylyltransferase activity","secondary_identifiers":["EC:2.7.7.45","KEGG_REACTION:R00012","MetaCyc:2.7.7.45-RXN"],"synonyms":[{"name":"GTP:GTP guanylyltransferase activity","type":"broad"},{"name":"guanosine-triphosphate guanylyltransferase activity","type":"exact"}],"termid":"GO:0047351"}


id: PBO:0091727
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Upregulated During Septation","termid":"PBO:0091727"}


id: GO:0052869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoate + O2 + reduced [NADPH--hemoprotein reductase] = 20-hydroxy-(5Z,8Z,11Z,14Z)-eicosatetraenoate + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. (5Z,8Z,11Z,14Z)-icosatetraenoic acid is also known as arachidonic acid is also and 20-hydroxy-(5Z,8Z,11Z,14Z)-eicosatetraenoate as 20-HETE.","definition_xrefs":["RHEA:39755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"arachidonic acid omega-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07041","MetaCyc:RXN-19677"],"synonyms":[{"name":"arachidonic acid hydroxylase activity","type":"broad"},{"name":"arachidonic acid:oxygen 1-oxidoreductase activity","type":"exact"}],"termid":"GO:0052869"}


id: PBO:0085472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Presumed antiporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; expression of gene is up-regulated in cells exhibiting reduced susceptibility to azoles","termid":"PBO:0085472"}


id: PBO:0049446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucoside xylosyltransferase 1","termid":"PBO:0049446"}


id: GO:0035857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of an eosinophil cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.","definition_xrefs":["GOC:BHF","GOC:vk","CL:0000771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"eosinophil fate commitment","termid":"GO:0035854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil fate specification","synonyms":[{"name":"eosinophil cell fate specification","type":"exact"}],"termid":"GO:0035857"}


id: GO:0072143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesangial cell in the kidney over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"mesangial cell differentiation","termid":"GO:0072007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell development","termid":"GO:0072143"}


id: GO:0030139
data:
  {"annotated_genes":["SJAG_03146","SJAG_00800","SJAG_00104","SJAG_00677","SJAG_01189","SJAG_03504","SJAG_01167","SJAG_02833","SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89947,103663,106799,106899,111561],"is_not":false,"summary":null,"term":"GO:0030139"},{"annotations":[104440,107757,107698,92395],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.","definition_xrefs":["GOC:go_curators","PMID:19696797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00677":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01189":null,"SJAG_02805":null,"SJAG_02833":null,"SJAG_03146":null,"SJAG_03504":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"endocytic vesicle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1362520468"],"synonyms":[{"name":"endocytotic transport vesicle","type":"exact"},{"name":"endocytotic vesicle","type":"exact"}],"termid":"GO:0030139","terms_by_termid":{"GO:0030122":null,"GO:0030139":null}}


id: GO:2000320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 17 cell differentiation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T-helper cell differentiation","termid":"GO:0045623"},{"relation_name":"is_a","term_name":"negative regulation of T-helper 17 type immune response","termid":"GO:2000317"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell differentiation","termid":"GO:2000319"},{"relation_name":"negatively_regulates","term_name":"T-helper 17 cell differentiation","termid":"GO:0072539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T-helper 17 cell differentiation","synonyms":[{"name":"negative regulation of T-helper 17 cell development","type":"related"}],"termid":"GO:2000320"}


id: GO:0042279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH3 + 2 H2O + 6 ferricytochrome c = nitrite + 6 ferrocytochrome c + 7 H+.","definition_xrefs":["EC:1.7.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"},{"relation_name":"is_a","term_name":"nitrite reductase activity","termid":"GO:0098809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitrite reductase (cytochrome, ammonia-forming) activity","secondary_identifiers":["RHEA:13089","MetaCyc:1.7.2.2-RXN","Wikipedia:Cytochrome_c_nitrite_reductase"],"synonyms":[{"name":"ammonia:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"cytochrome c nitrite reductase activity","type":"exact"},{"name":"cytochrome c552 activity","type":"narrow"},{"name":"multiheme nitrite reductase activity","type":"exact"},{"name":"nitrite reductase (cytochrome; ammonia-forming)","type":"related"}],"termid":"GO:0042279"}


id: PBO:0067152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 202, pseudogene","termid":"PBO:0067152"}


id: GO:0019858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cytosine metabolic process","synonyms":[{"name":"cytosine metabolism","type":"exact"}],"termid":"GO:0019858"}


id: PBO:0073034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretin receptor","termid":"PBO:0073034"}


id: PBO:0048828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNG12, DIRAS3 and WLS antisense RNA 1","termid":"PBO:0048828"}


id: GO:2000139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of octopamine signaling pathway involved in response to food.","definition_xrefs":["GOC:mah","PMID:19609300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"regulates","term_name":"octopamine signaling pathway involved in response to food","termid":"GO:0071935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of octopamine signaling pathway involved in response to food","synonyms":[{"name":"regulation of octopamine signalling pathway involved in response to food","type":"exact"}],"termid":"GO:2000139"}


id: GO:0019705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a myristoyl (systematic name, tetradecanoyl) group to a sulfur atom on a cysteine residue of a protein molecule in the reaction: tetradecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-tetradecanoyl-L-cysteinyl-[protein].","definition_xrefs":["GOC:ai","PMID:22247542","RHEA:59736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoyltransferase activity","termid":"GO:0019107"},{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"protein-cysteine S-myristoyltransferase activity","termid":"GO:0019705"}


id: FYPO:0003289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to medial cortical node","synonyms":[{"name":"abnormal protein localisation to medial cortical node","type":"exact"},{"name":"abnormal protein localization to cortical medial dot","type":"exact"},{"name":"abnormal protein localization to cytokinetic nodes","type":"related"},{"name":"abnormal protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"abnormal protein localization to medial cortical nodes","type":"exact"},{"name":"abnormal protein recruitment to medial cortical node","type":"related"}],"termid":"FYPO:0003289"}


id: GO:1901914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"negatively_regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of capsule organization","synonyms":[{"name":"down regulation of capsule organisation","type":"exact"},{"name":"down regulation of capsule organization","type":"exact"},{"name":"down regulation of capsule organization and biogenesis","type":"related"},{"name":"down-regulation of capsule organisation","type":"exact"},{"name":"down-regulation of capsule organization","type":"exact"},{"name":"down-regulation of capsule organization and biogenesis","type":"related"},{"name":"downregulation of capsule organisation","type":"exact"},{"name":"downregulation of capsule organization","type":"exact"},{"name":"downregulation of capsule organization and biogenesis","type":"related"},{"name":"inhibition of capsule organisation","type":"narrow"},{"name":"inhibition of capsule organization","type":"narrow"},{"name":"inhibition of capsule organization and biogenesis","type":"related"},{"name":"negative regulation of capsule organisation","type":"exact"},{"name":"negative regulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901914"}


id: GO:0052689
data:
  {"annotated_genes":["SJAG_02093","SJAG_01198","SJAG_00734","SJAG_03604","SJAG_04846","SJAG_02091","SJAG_00936","SJAG_01248","SJAG_02487","SJAG_03377","SJAG_02015","SJAG_04790","SJAG_01036","SJAG_04105","SJAG_02068","SJAG_04738","SJAG_01570","SJAG_03204","SJAG_00308","SJAG_05221","SJAG_01628","SJAG_02089","SJAG_03545","SJAG_04110","SJAG_04285","SJAG_04973","SJAG_02647","SJAG_02268","SJAG_02543","SJAG_00443","SJAG_02907","SJAG_04311","SJAG_01824","SJAG_01259","SJAG_00158","SJAG_02428","SJAG_04323","SJAG_05008","SJAG_02100","SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89641,96676,97054],"is_not":false,"summary":null,"term":"GO:0052689"},{"annotations":[97977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003847"},{"annotations":[101638,111432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017057"},{"annotations":[70039,77255,93814,113668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047372"},{"annotations":[108750,112153,94222,91176,89848,93804,100771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002161"},{"annotations":[87699,98188,104254,94777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004045"},{"annotations":[102022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043907"},{"annotations":[96570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051500"},{"annotations":[111823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061685"},{"annotations":[88016,88008,96933,113076,86274,90050,99095,110863,110170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[96412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050185"},{"annotations":[95865,88017,96934,86275,99096,88009,110864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[109576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051722"},{"annotations":[100114,99479,111179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004771"},{"annotations":[90164,86268,110899,90051,88022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a carboxylic ester bond.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00308":null,"SJAG_00443":null,"SJAG_00734":null,"SJAG_00936":null,"SJAG_01036":null,"SJAG_01198":null,"SJAG_01248":null,"SJAG_01259":null,"SJAG_01570":null,"SJAG_01628":null,"SJAG_01797":null,"SJAG_01824":null,"SJAG_02015":null,"SJAG_02068":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02268":null,"SJAG_02428":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02647":null,"SJAG_02907":null,"SJAG_03204":null,"SJAG_03377":null,"SJAG_03545":null,"SJAG_03604":null,"SJAG_04105":null,"SJAG_04110":null,"SJAG_04285":null,"SJAG_04311":null,"SJAG_04323":null,"SJAG_04738":null,"SJAG_04790":null,"SJAG_04846":null,"SJAG_04973":null,"SJAG_05008":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"carboxylic ester hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8937442","Reactome:R-HSA-9749792","GO:0004091","GO:0004302","EC:3.1.1.-","GO:0004759","UM-BBD_reactionID:r1025","GO:0016789","Reactome:R-HSA-5693691","KEGG_REACTION:R00630"],"synonyms":[{"name":"carboxylate esterase activity","type":"related"},{"name":"carboxylic esterase activity","type":"related"},{"name":"hydrolase activity acting on ester bonds","type":"related"}],"termid":"GO:0052689","terms_by_termid":{"GO:0002161":null,"GO:0003847":null,"GO:0004045":null,"GO:0004622":null,"GO:0004623":null,"GO:0004771":null,"GO:0004806":null,"GO:0017057":null,"GO:0043907":null,"GO:0047372":null,"GO:0050185":null,"GO:0051500":null,"GO:0051722":null,"GO:0052689":null,"GO:0061685":null}}


id: PBO:0067229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 300, pseudogene","termid":"PBO:0067229"}


id: PBO:0079353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1a","termid":"PBO:0079353"}


id: PBO:0033786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_anaphase-promoting_complex-dependent_protein_catabolic_process","termid":"PBO:0033786"}


id: PBO:0064488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A","termid":"PBO:0064488"}


id: GO:0102974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versicolorone + NADP = hydroxyversicolorone + NADPH.","definition_xrefs":["GOC:pz","RHEA:35691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydroxyversicolorone reductase activity","secondary_identifiers":["MetaCyc:RXN-9489","EC:1.1.1.353"],"termid":"GO:0102974"}


id: PBO:0109382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 13","termid":"PBO:0109382"}


id: GO:0033000
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an Fc-gamma RI alpha chain and an Fc-epsilon RI gamma chain dimer with or without additional signaling components. The complex functions primarily as an activating receptor for IgG.","definition_xrefs":["GOC:add","PMID:12413532","PMID:11244038","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor complex","termid":"GO:0032997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Fc-gamma receptor I complex","synonyms":[{"name":"FcgRI complex","type":"exact"},{"name":"IgG receptor complex","type":"broad"},{"name":"immunoglobulin G receptor complex","type":"broad"}],"termid":"GO:0033000"}


id: GO:0018989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first process of molting, characterized by the detachment of the old cuticle from the underlying epidermal cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apolysis","secondary_identifiers":["Wikipedia:Apolysis"],"termid":"GO:0018989"}


id: GO:1905197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any endocannabinoid signaling pathway that is involved in retrograde trans-synaptic signaling by endocannabinoid.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:23040807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocannabinoid signaling pathway involved in trans-synaptic signaling","termid":"GO:1905129"},{"relation_name":"part_of","term_name":"retrograde trans-synaptic signaling by endocannabinoid","termid":"GO:0098921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endocannabinoid signaling pathway involved in retrograde trans-synaptic signaling","synonyms":[{"name":"endocannabinoid signalling pathway involved in retrograde trans-synaptic signaling by endocannabinoid","type":"exact"}],"termid":"GO:1905197"}


id: PBO:0027148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_farnesyltranstransferase_activity","termid":"PBO:0027148"}


id: PBO:0067211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 277, pseudogene","termid":"PBO:0067211"}


id: GO:0044491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the function of proteins in a second organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"modulation of molecular function in another organism","termid":"GO:0044359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of molecular function in another organism","synonyms":[{"name":"positive regulation of molecular function in other organism","type":"exact"}],"termid":"GO:0044491"}


id: PBO:0087785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sugar alcohol phosphatase; polyol phosphatase that hydrolyzes sorbitol-6-phosphate, ribitol-5-phosphate, and (D)-glycerol-3-phosphate, maintaining phosphoglucose isomerase (PGI) activity in the presence of PGI-inhibitory sugar alcohols; expression correlated with growth rate; GFP-fusion protein localizes to the cytoplasm and nucleus; homozygous diploid mutant displays increased glycogen accumulation; member of the haloacid dehalogenase (HAD) superfamily","termid":"PBO:0087785"}


id: PBO:0053429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 374","termid":"PBO:0053429"}


id: PBO:0076910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor A, mitochondrial pseudogene 2","termid":"PBO:0076910"}


id: GO:1903821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any detection of stimulus that is involved in morphogenesis checkpoint.","definition_xrefs":["GO_REF:0000060","GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in morphogenesis checkpoint (obsolete GO:1903821)","synonyms":[{"name":"detection of stimulus involved in septin checkpoint","type":"related"},{"name":"perception of stimulus involved in morphogenesis checkpoint","type":"exact"},{"name":"perception of stimulus involved in septin checkpoint","type":"related"},{"name":"stimulus detection involved in morphogenesis checkpoint","type":"exact"},{"name":"stimulus detection involved in septin checkpoint","type":"related"},{"name":"stimulus sensing involved in morphogenesis checkpoint","type":"exact"},{"name":"stimulus sensing involved in septin checkpoint","type":"related"}],"termid":"GO:1903821"}


id: FYPO:0008196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3-KMe binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone binding","termid":"FYPO:0007835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased histone H3-K9Me binding","termid":"FYPO:0008196"}


id: PBO:0064304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLLP pseudogene 1","termid":"PBO:0064304"}


id: FYPO:0000233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"long cytoplasmic microtubules","synonyms":[{"name":"elongated cytoplasmic microtubules","type":"exact"},{"name":"long cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"long cytoplasmic microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defect, long cytoplasmic microtubules","type":"exact"},{"name":"microtubule organization defects, long cytoplasmic microtubules","type":"exact"}],"termid":"FYPO:0000233"}


id: GO:0071000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnetic stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to magnetism","synonyms":[{"name":"response to magnetic stimulus","type":"exact"}],"termid":"GO:0071000"}


id: FYPO:0007883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cleavage-dependent termination of transcription by RNA polymerase II is abnormal. In cleavage-dependent termination, co-transcriptional secondary structure-dependent endonucleolytic cleavage triggers RNA polymerase II transcription termination; transcripts are not polyadenylated, and are subsequently rapidly degraded in the nucleus. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["PomBase:mah","PMID:34352089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased termination of RNA polymerase II transcription","termid":"FYPO:0006613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"decreased cleavage-dependent termination of RNA polymerase II transcription","synonyms":[{"name":"decreased Pac1-dependent termination of RNA polymerase II transcription","type":"related"},{"name":"decreased cleavage-dependent RNA polymerase II transcription termination","type":"exact"},{"name":"decreased cleavage-dependent premature transcription termination","type":"narrow"},{"name":"decreased cleavage-dependent termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"decreased cleavage-dependent termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0007883"}


id: PBO:0005811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Sal3","termid":"PBO:0005811"}


id: SO:0000823
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome with origin in a leucoplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"leucoplast_sequence","termid":"SO:0000747"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucoplast_chromosome","synonyms":[{"name":"leucoplast chromosome","type":"exact"}],"termid":"SO:0000823"}


id: GO:0030382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of sperm mitochondria; the process in which they take on their characteristic morphology; they are flattened, elongated, and arranged circumferentially into a tight helical coil around the tail-dense fibers of the mature sperm.","definition_xrefs":["GOC:jl","GOC:mah","PMID:8833144","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"sperm mitochondrion organization","synonyms":[{"name":"sperm mitochondria organisation","type":"exact"},{"name":"sperm mitochondria organization and biogenesis","type":"related"},{"name":"sperm mitochondrion organization and biogenesis","type":"related"}],"termid":"GO:0030382"}


id: GO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reversible reaction: (R,R)-butane-2,3-diol + NAD+ = (R)-acetoin + NADH + H+.","definition_xrefs":["EC:1.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(R,R)-butanediol dehydrogenase activity","secondary_identifiers":["MetaCyc:RR-BUTANEDIOL-DEHYDROGENASE-RXN","RHEA:24340"],"synonyms":[{"name":"(R)-2,3-butanediol dehydrogenase activity","type":"related"},{"name":"(R)-diacetyl reductase activity","type":"related"},{"name":"1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"1-amino-2-propanol oxidoreductase activity","type":"related"},{"name":"2,3-butanediol dehydrogenase activity","type":"related"},{"name":"D-(-)-butanediol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol:NAD(2) oxidoreductase activity","type":"related"},{"name":"D-aminopropanol dehydrogenase activity","type":"related"},{"name":"D-butanediol dehydrogenase activity","type":"related"},{"name":"aminopropanol oxidoreductase activity","type":"related"},{"name":"butylene glycol dehydrogenase activity","type":"related"},{"name":"butyleneglycol dehydrogenase activity","type":"related"},{"name":"diacetyl (acetoin) reductase activity","type":"related"}],"termid":"GO:0000721"}


id: GO:0061298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the retina over time, from its formation to the mature structure.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina vasculature development in camera-type eye","synonyms":[{"name":"retinal vasculature development","type":"exact"}],"termid":"GO:0061298"}


id: GO:0051020
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id: PBO:0091146
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id: PBO:0017410
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id: GO:1901233
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id: PATO:0001153
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id: PBO:0053151
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id: GO:0015811
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id: PBO:0086622
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id: GO:0010476
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id: GO:0016491
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id: PBO:0073000
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id: PBO:0072538
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 68","termid":"PBO:0072538"}


id: PBO:0072339
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 25","termid":"PBO:0072339"}


id: PBO:0082115
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-coA synthetase isoform; along with Acs1p, acetyl-coA synthetase isoform is the nuclear source of acetyl-coA for histone acetylation; mutants affect global transcription; required for growth on glucose; expressed under anaerobic conditions","termid":"PBO:0082115"}


id: GO:0015168
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glycerol from one side of a membrane to the other. Glycerol is 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glycerol transmembrane transporter activity","termid":"GO:0015168"}


id: GO:2000626
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"negative regulation of miRNA metabolic process","termid":"GO:2000629"},{"relation_name":"negatively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA catabolic process","synonyms":[{"name":"negative regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000626"}


id: PBO:0031644
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id: GO:0075084
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075084)","synonyms":[{"name":"modulation by host of symbiont transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075084"}


id: GO:2000717
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id: GO:0033834
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + kaempferol = UDP + kaempferol 3-O-beta-D-galactoside.","definition_xrefs":["EC:2.4.1.234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"kaempferol 3-O-galactosyltransferase activity","secondary_identifiers":["RHEA:15709","MetaCyc:2.4.1.234-RXN"],"synonyms":[{"name":"F3GalTase activity","type":"related"},{"name":"UDP-galactose:kaempferol 3-O-beta-D-galactosyltransferase activity","type":"related"}],"termid":"GO:0033834"}


id: PBO:0039931
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF35 antisense RNA 1","termid":"PBO:0039931"}


id: PBO:0040102
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARVCF delta catenin family member","termid":"PBO:0040102"}


id: GO:0110162
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  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111154],"is_not":false,"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic anaphase B (spindle phase three).","definition_xrefs":["PMID:27697865","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"regulates","term_name":"mitotic spindle elongation (spindle phase three)","termid":"GO:0061805"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of mitotic spindle elongation (spindle phase three)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110162","terms_by_termid":{"GO:0110162":null}}


id: GO:0002142
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins that connect growing stereocilia in developing cochlear hair cells, composed of Vlgr1, usherin, vezatin, and whirlin.","definition_xrefs":["PMID:16775142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"stereocilia ankle link","termid":"GO:0002141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"stereocilia ankle link complex","termid":"GO:0002142"}


id: PATO:0000272
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000272 relative neurobehavioral function (obsolete PATO:0000272)","termid":"PATO:0000272"}


id: GO:1902964
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of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902964"}


id: PBO:0017733
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Christianson Syndrome","termid":"PBO:0017733"}


id: PBO:0090990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, glycine Hem25","termid":"PBO:0090990"}


id: PBO:0029867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K56_acetylation_in_transcribed_regions","termid":"PBO:0029867"}


id: PBO:0079321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 11","termid":"PBO:0079321"}


id: PBO:0056497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 2","termid":"PBO:0056497"}


id: GO:1990649
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104405],"is_not":false,"summary":null,"term":"GO:1990649"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,2,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,2,4-trisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-1,2,4,5-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990649","terms_by_termid":{"GO:1990649":null}}


id: PR:O14305
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sid1 gene.","definition_xrefs":["UniProtKB:O14305","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase sid1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.09","synonyms":[{"name":"STE20-like kinase sid1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sid1","type":"exact"}],"termid":"PR:O14305"}


id: PR:Q9UT20
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-oxo-5-alpha-steroid 4-dehydrogenase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.08c","secondary_identifiers":["UniProtKB:Q9UT20"],"synonyms":[{"name":"Spom972h-SRD5A1","type":"exact"}],"termid":"PR:Q9UT20"}


id: GO:1905055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any calcium:cation antiporter activity that is involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:TermGenie","GO_REF:0000061","PMID:22972962","PMID:23255722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"calcium:monoatomic cation antiporter activity involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium ion antiporter activity involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"calcium:cation antiporter activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"broad"}],"termid":"GO:1905055"}


id: GO:0005845
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cap binding complex (obsolete GO:0005845)","termid":"GO:0005845"}


id: GO:0016578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of ubiquitin groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone deubiquitination (obsolete GO:0016578)","synonyms":[{"name":"histone deubiquitinylation","type":"exact"},{"name":"histone deubiquitylation","type":"exact"}],"termid":"GO:0016578"}


id: GO:1990030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Ramification of basket cell axon surrounding cell bodies, forming the characteristic pericellular baskets from which the cell class derives its name.","definition_xrefs":["NIF_Subcellular:sao413722576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pericellular basket","synonyms":[{"name":"peri cellular basket","type":"exact"},{"name":"peri-cellular basket","type":"exact"}],"termid":"GO:1990030"}


id: GO:0052169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism modulates the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response (obsolete GO:0052169)","synonyms":[{"name":"pathogen-associated molecular pattern dependent modulation by symbiont of host innate immunity","type":"exact"}],"termid":"GO:0052169"}


id: GO:0009986
data:
  {"annotated_genes":["SJAG_00784","SJAG_00254","SJAG_00667","SJAG_02076","SJAG_02093","SJAG_01290","SJAG_01861","SJAG_01171","SJAG_02711","SJAG_03646","SJAG_04864","SJAG_00485","SJAG_04720","SJAG_02173","SJAG_01086","SJAG_03998","SJAG_01975","SJAG_04238","SJAG_02959","SJAG_01017","SJAG_03824","SJAG_00310","SJAG_04851","SJAG_04875","SJAG_04398","SJAG_02260","SJAG_00340","SJAG_00096","SJAG_00109","SJAG_02435","SJAG_05272","SJAG_00415","SJAG_02580","SJAG_04209","SJAG_03204","SJAG_03295","SJAG_02649","SJAG_04685","SJAG_02916","SJAG_00218","SJAG_03521","SJAG_00781","SJAG_04789","SJAG_02192","SJAG_01888","SJAG_03640","SJAG_04723","SJAG_02131","SJAG_01029","SJAG_01835","SJAG_00239","SJAG_00981","SJAG_05001","SJAG_04850"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83618,83749,83750,84240,84449,86076,87981,89293,90142,91229,91343,91837,92235,92236,93065,96258,98055,98056,99355,99419,102383,104171,104499,110104,111679],"is_not":false,"summary":null,"term":"GO:0009986"},{"annotations":[96922,96923,84862,112060,112061,88615,88614],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010339"},{"annotations":[97184,97761,97762,99087,98836,99088,102960],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070263"},{"annotations":[87707,90979,88004,90977,90178,86271,91405,98367,109850,110859,113860,114406,96928,113429,98368,110480,90978,98360,102662,86077,103886,90965,109146,110580,100115,112378,111697,114839],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009897"}]},"cv_name":"cellular_component","definition":"The external part of the cell wall and/or plasma membrane.","definition_xrefs":["GOC:jl","GOC:mtg_sensu","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00218":null,"SJAG_00239":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00415":null,"SJAG_00485":null,"SJAG_00667":null,"SJAG_00781":null,"SJAG_00784":null,"SJAG_00981":null,"SJAG_01017":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01171":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_01861":null,"SJAG_01888":null,"SJAG_01975":null,"SJAG_02076":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02173":null,"SJAG_02192":null,"SJAG_02260":null,"SJAG_02435":null,"SJAG_02580":null,"SJAG_02649":null,"SJAG_02711":null,"SJAG_02916":null,"SJAG_02959":null,"SJAG_03204":null,"SJAG_03295":null,"SJAG_03521":null,"SJAG_03640":null,"SJAG_03646":null,"SJAG_03824":null,"SJAG_03998":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04398":null,"SJAG_04685":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04864":null,"SJAG_04875":null,"SJAG_05001":null,"SJAG_05272":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell surface","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0009929","GO:0009928"],"synonyms":[{"name":"cell associated","type":"exact"},{"name":"cell bound","type":"exact"}],"termid":"GO:0009986","terms_by_termid":{"GO:0009897":null,"GO:0009986":null,"GO:0010339":null,"GO:0070263":null}}


id: PBO:0065818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4B-EGLN2 readthrough (NMD candidate)","termid":"PBO:0065818"}


id: PBO:0070608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 76","termid":"PBO:0070608"}


id: PBO:0039510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30A","termid":"PBO:0039510"}


id: PBO:0089475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphate-dependent transferase, unknown specificity, implicated in sulfur compound metabolism","termid":"PBO:0089475"}


id: GO:0032800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor biosynthetic process (obsolete GO:0032800)","synonyms":[{"name":"receptor anabolism","type":"exact"},{"name":"receptor biosynthesis","type":"exact"},{"name":"receptor formation","type":"exact"},{"name":"receptor synthesis","type":"exact"}],"termid":"GO:0032800"}


id: PBO:0072148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 25","termid":"PBO:0072148"}


id: PBO:0109462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L50","termid":"PBO:0109462"}


id: GO:0004103
data:
  {"annotated_genes":["SJAG_01918"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84973],"is_not":false,"summary":null,"term":"GO:0004103"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + choline = ADP + choline phosphate + 2 H+.","definition_xrefs":["EC:2.7.1.32","RHEA:12837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"choline kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01021","MetaCyc:CHOLINE-KINASE-RXN","Reactome:R-HSA-1483004"],"synonyms":[{"name":"ATP:choline phosphotransferase activity","type":"related"},{"name":"choline kinase (phosphorylating)","type":"related"},{"name":"choline phosphokinase activity","type":"related"},{"name":"choline-ethanolamine kinase activity","type":"related"}],"termid":"GO:0004103","terms_by_termid":{"GO:0004103":null}}


id: PBO:0039015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG3L2 pseudogene 1","termid":"PBO:0039015"}


id: FYPO:0004272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore release from an ascus is abnormal.","definition_xrefs":["PomBase:mah","GO:0071998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}


id: GO:0098601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-Selenomethionine + H2O => Orthophosphate + Diphosphate + Se-Adenosylselenomethionine.","definition_xrefs":["PMID:2339986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"selenomethionine adenosyltransferase activity","secondary_identifiers":["RHEA:31211","Reactome:R-HSA-2408551"],"termid":"GO:0098601"}


id: GO:0030229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a very-low-density lipoprotein particle and delivering the very-low-density lipoprotein into the cell via endocytosis.","definition_xrefs":["ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor activity","termid":"GO:0030228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"very-low-density lipoprotein particle receptor activity","secondary_identifiers":["Wikipedia:VLDL_receptor"],"synonyms":[{"name":"VLDL receptor","type":"exact"},{"name":"apolipoprotein E receptor activity","type":"related"},{"name":"very-low-density lipoprotein receptor activity","type":"exact"}],"termid":"GO:0030229"}


id: PBO:0047150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 182 member A","termid":"PBO:0047150"}


id: PBO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence updated","termid":"PBO:0002438"}


id: PBO:0076433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 9","termid":"PBO:0076433"}


id: PBO:0062361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily U member 2 pseudogene","termid":"PBO:0062361"}


id: MOD:00543
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:11698400","Unimod:187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(hydroxyphenylglyoxal) arginine","synonyms":[{"name":"2HPG","type":"related"},{"name":"bis(hydroxphenylglyoxal) arginine","type":"related"}],"termid":"MOD:00543"}


id: GO:0008901
data:
  {"annotated_genes":["SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110871],"is_not":false,"summary":null,"term":"GO:0008901"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2.","definition_xrefs":["EC:1.12.7.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor","termid":"GO:0016699"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ferredoxin hydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:17445","GO:0016949","GO:0016950","GO:0016948","GO:0016951","MetaCyc:HYDROG-RXN","UM-BBD_enzymeID:e0418"],"synonyms":[{"name":"H(2) oxidizing hydrogenase activity","type":"broad"},{"name":"H(2) producing hydrogenase activity","type":"broad"},{"name":"H2 oxidizing hydrogenase","type":"broad"},{"name":"H2 producing hydrogenase","type":"broad"},{"name":"Ni-Fe hydrogenase activity","type":"narrow"},{"name":"Ni-Fe-Se hydrogenase activity","type":"narrow"},{"name":"[Fe] hydrogenase activity","type":"exact"},{"name":"[Fe] hydrogenase gamma","type":"related"},{"name":"bidirectional hydrogenase activity","type":"broad"},{"name":"hydrogen-lyase activity","type":"broad"},{"name":"hydrogen:ferredoxin oxidoreductase activity","type":"exact"},{"name":"hydrogenase (ferredoxin) activity","type":"related"},{"name":"hydrogenase I","type":"related"},{"name":"hydrogenase II","type":"related"},{"name":"hydrogenase activity","type":"broad"},{"name":"hydrogenlyase activity","type":"broad"},{"name":"iron hydrogenase activity","type":"narrow"},{"name":"iron-only hydrogenase activity","type":"narrow"},{"name":"nickel hydrogenase activity","type":"narrow"},{"name":"nickel-iron hydrogenase activity","type":"narrow"},{"name":"nickel-iron-selenium hydrogenase activity","type":"narrow"},{"name":"uptake hydrogenase activity","type":"broad"}],"termid":"GO:0008901","terms_by_termid":{"GO:0008901":null}}


id: PR:Q10274
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- teb1 gene.","definition_xrefs":["UniProtKB:Q10274","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telobox protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.10","synonyms":[{"name":"Spom972h-teb1","type":"exact"},{"name":"meiotically up-regulated gene 152 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10274"}


id: PR:Q9P7S5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin carboxyl-terminal hydrolase 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00340","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.08c","secondary_identifiers":["UniProtKB:Q9P7S5"],"synonyms":[{"name":"Spom972h-USP20","type":"exact"},{"name":"deubiquitinating enzyme 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7S5"}


id: PBO:0003382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide (predicted)","termid":"PBO:0003382"}


id: PR:O74800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial inner membrane protease subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12383:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protease subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.07c","secondary_identifiers":["UniProtKB:O74800"],"synonyms":[{"name":"SPBC2D10.07c","type":"related"},{"name":"Spom972h-IMMP1L","type":"exact"}],"termid":"PR:O74800"}


id: FYPO:0005490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to vacuole","synonyms":[{"name":"abnormal protein localisation to vacuole","type":"exact"},{"name":"abnormal protein localization in vacuole","type":"exact"},{"name":"abnormal protein localization to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0005490"}


id: GO:0140080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of an AP site 3' and 5' of the baseless site, generating a 3'-phosphate and a 5'-OH.","definition_xrefs":["PMID:2519777"],"gene_count":0,"genotype_count":0,"name":"obsolete class III/IV DNA-(apurinic or apyrimidinic site) endonuclease activity (obsolete GO:0140080)","secondary_identifiers":["Wikipedia:AP_endonuclease"],"synonyms":[{"name":"endonuclease III","type":"related"},{"name":"endonuclease IV","type":"related"}],"termid":"GO:0140080"}


id: PR:Q9C1X0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase organizer 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02622","PANTHER:PTHR22842:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C713.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.05","secondary_identifiers":["UniProtKB:Q9C1X0"],"synonyms":[{"name":"Spom972h-WDR83","type":"exact"}],"termid":"PR:Q9C1X0"}


id: PBO:0090841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L16","termid":"PBO:0090841"}


id: RO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of starts with","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts","termid":"RO:0002223"}


id: GO:0150165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a microRNA (miRNA) that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA-mediated inhibition of transcription by RNA polymerase II (obsolete GO:0150165)","termid":"GO:0150165"}


id: MOD:01298
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-cysteine residue with 4-hydroxynonenal artificially reduced by a reagent such as NaBH4.","definition_xrefs":["PubMed:15133838","PubMed:11910026","Unimod:335#C"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cysteine 4-hydroxynonenal adduct","termid":"MOD:01237"},{"relation_name":"is_a","term_name":"reduced 4-hydroxynonenal adduct","termid":"MOD:00642"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced cysteine 4-hydroxynonenal adduct","synonyms":[{"name":"HNE+Delta:H(2)","type":"related"},{"name":"reduced 4-Hydroxynonenal","type":"related"}],"termid":"MOD:01298"}


id: PBO:0044703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 4","termid":"PBO:0044703"}


id: MOD:01863
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with one of the Applied Biosystems mTRAQ reagent reporter+balance groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"mTRAQ reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"}],"termid":"MOD:01863"}


id: GO:1900437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:1900437"}


id: PBO:0091127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi kish family protein Ksh1","termid":"PBO:0091127"}


id: FYPO:0002193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, contains one or more septa, is shaped in the form of a spheroid, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal volume vegetative cell","termid":"FYPO:0000926"},{"relation_name":"has_part","term_name":"spheroid cell","termid":"FYPO:0001955"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"normal volume vegetative cell","termid":"FYPO:0000926"},{"relation_name":"is_a","term_name":"inviable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001511"},{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable normal volume septated spheroid vegetative cell","synonyms":[{"name":"inviable normal volume septated rounded vegetative cell","type":"related"},{"name":"inviable normal volume septated spheroid cell during vegetative growth","type":"exact"},{"name":"inviable normal volume septated spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; normal volume septated spheroid vegetative cell","type":"exact"}],"termid":"FYPO:0002193"}


id: PBO:0078351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 17-1","termid":"PBO:0078351"}


id: FYPO:0003425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another does not occur during a cellular response to rapamycin. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein-protein interaction during cellular response to rapamycin","synonyms":[{"name":"abolished protein binding during cellular response to rapamycin","type":"exact"},{"name":"protein-protein interaction abolished during cellular response to rapamycin","type":"exact"}],"termid":"FYPO:0003425"}


id: PBO:0074335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1","termid":"PBO:0074335"}


id: PBO:0035841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ribosomal_S6_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0035841"}


id: GO:0046415
data:
  {"annotated_genes":["SJAG_04299"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019628"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving urate, the anion of uric acid, 2,6,8-trioxypurine, the end product of purine metabolism in certain mammals and the main excretory product in uricotelic animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04299":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"urate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"urate metabolism","type":"exact"}],"termid":"GO:0046415","terms_by_termid":{"GO:0019628":null}}


id: PBO:0027582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_vacuole_during_nitrogen_starvation","termid":"PBO:0027582"}


id: GO:0001002
data:
  {"annotated_genes":["SJAG_03354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95701],"is_not":false,"summary":null,"term":"GO:0001002"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of DNA that is a part of a type 1 promoter that controls transcription by RNA polymerase III. Type 1 promoters are found in 5S rRNA genes, downstream of the transcription start site within the sequence of the mature RNA, and require TFIIIA for recognition.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","termid":"GO:0000992"},{"relation_name":"is_a","term_name":"5S rDNA binding","termid":"GO:0080084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0000976","GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase III type 1 promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001030"],"synonyms":[{"name":"RNA polymerase III type 1 promoter DNA binding","type":"related"}],"termid":"GO:0001002","terms_by_termid":{"GO:0001002":null}}


id: PBO:0092761
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_throughput_type","termid":"PBO:0092761"}


id: PBO:0049243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrin releasing peptide","termid":"PBO:0049243"}


id: PBO:0028483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity","termid":"PBO:0028483"}


id: PBO:0084292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral vacuolar membrane protein; involved in vacuole inheritance and morphology; activates Fab1p kinase activity under basal conditions and also after hyperosmotic shock","termid":"PBO:0084292"}


id: PBO:0043943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptochrome circadian regulator 2","termid":"PBO:0043943"}


id: GO:0000204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of a MAP kinase kinase in the context of sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK during sporulation (sensu Saccharomyces) (obsolete GO:0000204)","synonyms":[{"name":"activation of MAPKK during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000204"}


id: PBO:0070709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 14","termid":"PBO:0070709"}


id: PBO:0063549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEDS1-UBE2V1 readthrough","termid":"PBO:0063549"}


id: FYPO:0006233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuolar membrane is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuolar membrane","termid":"FYPO:0004249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to vacuolar membrane","synonyms":[{"name":"decreased protein localisation to vacuolar membrane","type":"exact"},{"name":"decreased protein localization in vacuolar membrane","type":"exact"},{"name":"decreased protein localization to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to vacuolar membrane during vegetative growth","type":"exact"},{"name":"decreased protein localization to vacuole membrane","type":"exact"},{"name":"reduced protein localization to vacuolar membrane","type":"exact"}],"termid":"FYPO:0006233"}


id: GO:0034674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha5 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"integrin alpha5-beta1 complex","synonyms":[{"name":"ITGA5-ITGB1 complex","type":"narrow"},{"name":"VLA-5 complex","type":"exact"},{"name":"alpha5-beta1 integrin complex","type":"exact"}],"termid":"GO:0034674"}


id: GO:0006234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of TTP, ribosylthymine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009209"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"TTP metabolic process","termid":"GO:0046046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"TTP biosynthetic process","synonyms":[{"name":"TTP anabolism","type":"exact"},{"name":"TTP biosynthesis","type":"exact"},{"name":"TTP formation","type":"exact"},{"name":"TTP synthesis","type":"exact"}],"termid":"GO:0006234"}


id: FYPO:0003233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin islands is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at heterochromatin island during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0003233"}


id: GO:0032878
data:
  {"annotated_genes":["SJAG_01794","SJAG_00028","SJAG_03581","SJAG_04522","SJAG_03126","SJAG_02392","SJAG_00596","SJAG_02022","SJAG_00610","SJAG_00661","SJAG_00317","SJAG_04461","SJAG_02760","SJAG_04509","SJAG_01373","SJAG_00333","SJAG_01376","SJAG_00845","SJAG_00236","SJAG_03048","SJAG_04666","SJAG_02536","SJAG_04980","SJAG_03637","SJAG_01799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84072,87076,89604,91988,96319,96513,105532],"is_not":false,"summary":null,"term":"GO:0032878"},{"annotations":[87103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[103721,108584,99821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"},{"annotations":[112693,103722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"},{"annotations":[101456,89867,96294,99822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[90712,108073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000114"},{"annotations":[89868,98510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000099"},{"annotations":[87276,114856,90713,96297,109165,91797,101459,100642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000100"},{"annotations":[98966,84073,88547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00236":null,"SJAG_00317":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_01376":null,"SJAG_01794":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02760":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04980":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment or maintenance of cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032878","terms_by_termid":{"GO:0032878":null,"GO:0061173":null,"GO:1904846":null,"GO:2000099":null,"GO:2000100":null,"GO:2000114":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0049988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 1 pseudogene 2","termid":"PBO:0049988"}


id: PBO:0004962
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.169","termid":"PBO:0004962"}


id: PBO:0074070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 45","termid":"PBO:0074070"}


id: PBO:0089729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1","termid":"PBO:0089729"}


id: PBO:0046222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 15","termid":"PBO:0046222"}


id: PBO:0041999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 50","termid":"PBO:0041999"}


id: FYPO:0004394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during meiosis II, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lagging meiotic chromosomes","termid":"FYPO:0002091"},{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"lagging chromosomes during meiosis II","synonyms":[{"name":"lagging chromosomes during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004394"}


id: PBO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single-stranded DNA binding protein Rim1","termid":"PBO:0002293"}


id: PBO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DRB1","termid":"PBO:0001162"}


id: PBO:0065536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary thyroid carcinoma susceptibility candidate 3","termid":"PBO:0065536"}


id: GO:0030917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary development","synonyms":[{"name":"MHB development","type":"exact"},{"name":"isthmic organizer development","type":"exact"},{"name":"isthmomesencephalic boundary development","type":"exact"},{"name":"isthmus development","type":"exact"},{"name":"midbrain-hindbrain orgainizer development","type":"exact"}],"termid":"GO:0030917"}


id: PBO:0058684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6812","termid":"PBO:0058684"}


id: PBO:0026886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_vegetative_growth","termid":"PBO:0026886"}


id: FYPO:0003909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is greater than normal at promoters containing CRE sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:25122751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning at stress response genes","termid":"FYPO:0003812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased nucleosome occupancy at CRE site","synonyms":[{"name":"increased nucleosome occupancy at CRE site during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at CRE site during vegetative growth","type":"exact"}],"termid":"FYPO:0003909"}


id: PBO:0051094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 4","termid":"PBO:0051094"}


id: GO:0052218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near a second organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052218)","synonyms":[{"name":"positive energy taxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive energy taxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052218"}


id: PR:O60176
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cxr1 gene.","definition_xrefs":["UniProtKB:O60176","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C23E6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.01c","synonyms":[{"name":"Spom972h-cxr1","type":"exact"}],"termid":"PR:O60176"}


id: GO:0009910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of flower development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of flower development","termid":"GO:0009909"},{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of flower development","synonyms":[{"name":"down regulation of flower development","type":"exact"},{"name":"down-regulation of flower development","type":"exact"},{"name":"downregulation of flower development","type":"exact"},{"name":"inhibition of flower development","type":"narrow"}],"termid":"GO:0009910"}


id: PBO:0078718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 3-1","termid":"PBO:0078718"}


id: SO:0002318
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that alters the sequence of a gene product.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functional_effect_variant","termid":"SO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"altered_gene_product_sequence","synonyms":[{"name":"altered gene product structure","type":"exact"}],"termid":"SO:0002318"}


id: PBO:0061878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 1 pseudogene 2","termid":"PBO:0061878"}


id: PBO:0046055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F pseudogene 3","termid":"PBO:0046055"}


id: GO:1902190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-methylbutanoyl-CoA(4-).","definition_xrefs":["PMID:15574432","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"2-methylbutanoyl-CoA(4-) metabolic process","termid":"GO:1902189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0044281","GO:0055086","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"2-methylbutanoyl-CoA(4-) catabolic process","synonyms":[{"name":"2-methylbutanoyl-CoA(4-) breakdown","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) catabolism","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902190"}


id: PBO:0055406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2836","termid":"PBO:0055406"}


id: GO:0030173
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi membrane (obsolete GO:0030173)","synonyms":[{"name":"Golgi integral membrane protein","type":"related"},{"name":"integral to Golgi membrane","type":"narrow"}],"termid":"GO:0030173"}


id: GO:1904574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine insertion sequence binding.","definition_xrefs":["GOC:TermGenie","PMID:19716792","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mRNA binding","termid":"GO:1904572"},{"relation_name":"is_a","term_name":"regulation of selenocysteine insertion sequence binding","termid":"GO:1904573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of selenocysteine insertion sequence binding","synonyms":[{"name":"down regulation of SECIS binding","type":"exact"},{"name":"down regulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"down-regulation of SECIS binding","type":"exact"},{"name":"down-regulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"downregulation of SECIS binding","type":"exact"},{"name":"downregulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"inhibition of SECIS binding","type":"narrow"},{"name":"inhibition of selenocysteine insertion sequence binding","type":"narrow"},{"name":"negative regulation of SECIS binding","type":"exact"}],"termid":"GO:1904574"}


id: PBO:0004598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MYND type","termid":"PBO:0004598"}


id: PBO:0054322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1714","termid":"PBO:0054322"}


id: PBO:0047995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member L, pseudogene","termid":"PBO:0047995"}


id: PBO:0072599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"remodeling and spacing factor 1","termid":"PBO:0072599"}


id: PBO:0040538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 5","termid":"PBO:0040538"}


id: PR:P22189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cta3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P22189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-transporting ATPase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.06","synonyms":[{"name":"Spom972h-cta3","type":"exact"}],"termid":"PR:P22189"}


id: PBO:0090895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4A tif1","termid":"PBO:0090895"}


id: GO:0051254
data:
  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id: PATO:0001137
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id: PBO:0068075
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 380","termid":"PBO:0068075"}


id: GO:1903587
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id: PBO:0038646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase 1","termid":"PBO:0038646"}


id: GO:0046083
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id: PBO:0075565
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-1 proto-oncogene","termid":"PBO:0075565"}


id: PBO:0064503
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLR2D pseudogene 2","termid":"PBO:0064503"}


id: PBO:0088161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"v-SNARE component of the vacuolar SNARE complex; involved in vesicle fusion; inhibits ATP-dependent Ca(2+) transport activity of Pmc1p in the vacuolar membrane","termid":"PBO:0088161"}


id: GO:0031376
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity, located in the cytosol.","definition_xrefs":["ISBN:0716720094","PMID:12957385","ISBN:0471331309","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic type II fatty acid synthase complex (obsolete GO:0031376)","synonyms":[{"name":"cytosolic type II FAS complex","type":"exact"},{"name":"cytosolic type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031376"}


id: PBO:0086620
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and colocalizes in a punctate pattern with the early golgi/COPI vesicles; YOL107W is not an essential protein","termid":"PBO:0086620"}


id: FYPO:0004346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at non-coding RNA genes is decreased.","definition_xrefs":["PMID:25002536","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin at ncRNA genes","synonyms":[{"name":"decreased protein localisation to chromatin at ncRNA genes","type":"exact"},{"name":"decreased protein localization to chromatin at ncRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at ncRNA genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at non-coding RNA genes","type":"exact"},{"name":"reduced protein localization to chromatin at ncRNA genes","type":"exact"}],"termid":"FYPO:0004346"}


id: PBO:0054933
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2347","termid":"PBO:0054933"}


id: PBO:0082191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldehyde reductase; reduces aliphatic aldehyde substrates using NADH as cofactor; shown to reduce carbonyl compounds to chiral alcohols","termid":"PBO:0082191"}


id: PBO:0047211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 221 member B","termid":"PBO:0047211"}


id: GO:0150176
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylethanolamine metabolic process.","definition_xrefs":["GOC:bc","PMID:30074985","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylethanolamine metabolic process","termid":"GO:0150175"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phosphatidylethanolamine metabolic process","termid":"GO:0046337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidylethanolamine metabolic process","termid":"GO:0150176"}


id: GO:0090339
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.","definition_xrefs":["PMID:12810699","PMID:15923184","GOC:jh","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of actin filament bundle assembly","termid":"GO:0032232"},{"relation_name":"is_a","term_name":"regulation of formin-nucleated actin cable assembly","termid":"GO:0090337"},{"relation_name":"negatively_regulates","term_name":"formin-nucleated actin cable assembly","termid":"GO:0070649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"negative regulation of formin-nucleated actin cable assembly","termid":"GO:0090339"}


id: PBO:0041317
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 3","termid":"PBO:0041317"}


id: PBO:0050037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 5","termid":"PBO:0050037"}


id: FYPO:0006967
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of AICAR measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular AICAR level","synonyms":[{"name":"decreased cellular AICAR level during mitotic cell cycle","type":"related"},{"name":"decreased cellular AICAR level during vegetative growth","type":"exact"},{"name":"reduced cellular AICAR level","type":"exact"}],"termid":"FYPO:0006967"}


id: GO:1901943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-epi-alpha-bisabolol.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"(+)-epi-alpha-bisabolol metabolic process","termid":"GO:1901941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(+)-epi-alpha-bisabolol biosynthetic process","synonyms":[{"name":"(+)-epi-alpha-bisabolol anabolism","type":"exact"},{"name":"(+)-epi-alpha-bisabolol biosynthesis","type":"exact"},{"name":"(+)-epi-alpha-bisabolol formation","type":"exact"},{"name":"(+)-epi-alpha-bisabolol synthesis","type":"exact"}],"termid":"GO:1901943"}


id: PBO:0055681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase family member J","termid":"PBO:0055681"}


id: GO:0050990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The carbamoylation of the N-terminal amino acid of proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid carbamoylation","synonyms":[{"name":"N-terminal protein amino acid carbamylation","type":"exact"}],"termid":"GO:0050990"}


id: GO:0006597
data:
  {"annotated_genes":["SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109485],"is_not":false,"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03632":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spermine anabolism","type":"exact"},{"name":"spermine biosynthesis","type":"exact"},{"name":"spermine formation","type":"exact"},{"name":"spermine synthesis","type":"exact"}],"termid":"GO:0006597","terms_by_termid":{"GO:0006597":null}}


id: GO:0052219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near a second organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052219)","synonyms":[{"name":"negative energy taxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative energy taxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052219"}


id: PBO:0085080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear and mitochondrial glycosylase/lyase; specifically excises 7,8-dihydro-8-oxoguanine residues located opposite cytosine or thymine residues in DNA, repairs oxidative damage to mitochondrial DNA, contributes to UVA resistance","termid":"PBO:0085080"}


id: PATO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity to irradiation which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitivity to irradiation","termid":"PATO:0001806"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased sensitivity to irradiation","synonyms":[{"name":"high sensitivity to irradiation","type":"exact"}],"termid":"PATO:0001808"}


id: GO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The acrosomal membrane region that underlies the plasma membrane of the sperm. This membrane fuses with the sperm plasma membrane as part of the acrosome reaction.","definition_xrefs":["GOC:dph","PMID:8936405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"acrosomal membrane","termid":"GO:0002080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"outer acrosomal membrane","termid":"GO:0002081"}


id: PBO:0002235
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.52","termid":"PBO:0002235"}


id: PBO:0055459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2891","termid":"PBO:0055459"}


id: GO:1990629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex found as a homopentamer of the phospholamban (PLN) protein in the sarcoplasmic reticulum (SR) membrane of cardiomyocytes. Cardiac PLN is a main determinant of muscle contraction and relaxation, by regulating intracellular calcium levels.","definition_xrefs":["GOC:ame","PMID:16043693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005789","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"phospholamban complex","synonyms":[{"name":"cardiac PLB complex","type":"related"},{"name":"cardiac PLN complex","type":"related"},{"name":"cardiac phospholamban complex","type":"exact"}],"termid":"GO:1990629"}


id: GO:0004358
data:
  {"annotated_genes":["SJAG_01592"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98740],"is_not":false,"summary":null,"term":"GO:0004358"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-acetyl-L-ornithine + L-glutamate = N-acetyl-L-glutamate + L-ornithine.","definition_xrefs":["EC:2.3.1.35","RHEA:15349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02282","MetaCyc:GLUTAMATE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"2-N-acetyl-L-ornithine:L-glutamate N-acetyltransferase activity","type":"related"},{"name":"N-acetyl-L-glutamate synthetase activity","type":"broad"},{"name":"N-acetylglutamate synthase activity","type":"broad"},{"name":"N-acetylglutamate synthetase activity","type":"broad"},{"name":"N2-acetyl-L-ornithine:L-glutamate N-acetyltransferase activity","type":"related"},{"name":"acetylglutamate synthetase activity","type":"related"},{"name":"acetylglutamate-acetylornithine transacetylase activity","type":"related"},{"name":"acetylglutamic synthetase activity","type":"related"},{"name":"acetylglutamic-acetylornithine transacetylase activity","type":"related"},{"name":"acetylornithinase activity","type":"broad"},{"name":"acetylornithine glutamate acetyltransferase activity","type":"related"},{"name":"alpha-N-acetyl-L-ornithine:L-glutamate N-acetyltransferase activity","type":"related"},{"name":"glutamate acetyltransferase activity","type":"related"},{"name":"ornithine acetyltransferase activity","type":"related"},{"name":"ornithine transacetylase activity","type":"related"}],"termid":"GO:0004358","terms_by_termid":{"GO:0004358":null}}


id: PBO:0005707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex zeta subunit Ost5 (predicted)","termid":"PBO:0005707"}


id: PATO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape inhering in a bearer by virtue of the bearer's being elongated and cylindrical.","definition_xrefs":["PATOC:me"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"columnar","termid":"PATO:0002063"}


id: GO:0071004
data:
  {"annotated_genes":["SJAG_00504","SJAG_00058","SJAG_01654","SJAG_01008","SJAG_05009","SJAG_03547","SJAG_00859","SJAG_02558","SJAG_04163","SJAG_00322","SJAG_03469","SJAG_03995","SJAG_01301","SJAG_04214","SJAG_05240","SJAG_04318","SJAG_01870","SJAG_00225","SJAG_02279","SJAG_03210","SJAG_00911","SJAG_02844","SJAG_00498","SJAG_00474","SJAG_02304","SJAG_00249","SJAG_04911","SJAG_03983","SJAG_02185","SJAG_00809","SJAG_00147","SJAG_00577"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84689,87691,89165,89493,91053,91307,91465,91736,92463,93968,97361,97858,98662,99325,101618,101973,102502,102864,103046,104874,105615,106164,106739,106757,106767,108477,108764,109389,109966,111349,112511,114787],"is_not":false,"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by association of the 5' splice site with the U1 snRNP, while the branch point sequence is recognized by the U2 snRNP. The prespliceosome includes many proteins in addition to those found in the U1 and U2 snRNPs. Commitment to a given pair of 5' and 3' splice sites occurs at the time of prespliceosome formation.","definition_xrefs":["GOC:mah","GOC:ab","PMID:17332742","GOC:krc","PMID:19239890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"prespliceosome","termid":"GO:0071010"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01301":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02558":null,"SJAG_02844":null,"SJAG_03210":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U2-type prespliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG prespliceosome","type":"narrow"},{"name":"major prespliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex A","type":"narrow"},{"name":"yeast U2-type spliceosomal complex B","type":"narrow"}],"termid":"GO:0071004","terms_by_termid":{"GO:0071004":null}}


id: PBO:0089933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L36","termid":"PBO:0089933"}


id: PBO:0042465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4 pseudogene 2","termid":"PBO:0042465"}


id: FYPO:0001086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glucosyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal glucosyltransferase activity","termid":"FYPO:0001086"}


id: PBO:0079548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 1","termid":"PBO:0079548"}


id: PR:O94242
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aspartate--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04267","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.06","secondary_identifiers":["UniProtKB:O94242"],"synonyms":[{"name":"AspRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DARS2","type":"exact"},{"name":"aspartyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94242"}


id: GO:1901732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving quercetin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00724","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin metabolic process","synonyms":[{"name":"quercetin metabolism","type":"exact"}],"termid":"GO:1901732"}


id: GO:2000965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellooligosaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of cellooligosaccharide metabolic process","termid":"GO:2000962"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide catabolic process","termid":"GO:2000963"},{"relation_name":"positively_regulates","term_name":"cellooligosaccharide catabolic process","termid":"GO:2000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellooligosaccharide catabolic process","synonyms":[{"name":"positive regulation of cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000965"}


id: PBO:0043042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrolectin","termid":"PBO:0043042"}


id: PBO:0001490
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.32","termid":"PBO:0001490"}


id: GO:0010308
data:
  {"annotated_genes":["SJAG_00309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108541],"is_not":false,"summary":null,"term":"GO:0010308"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + O2 = 3-(methylthio)propanoate + CO + formate.","definition_xrefs":["EC:1.13.11.53","RHEA:14161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acireductone dioxygenase (Ni2+-requiring) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R07363","MetaCyc:R146-RXN"],"synonyms":[{"name":"1,2-dihydroxy-5-(methylthio)pent-1-en-3-one:oxygen oxidoreductase (formate- and CO-forming)","type":"related"},{"name":"2-hydroxy-3-keto-5-thiomethylpent-1-ene dioxygenase activity","type":"broad"},{"name":"ARD activity","type":"related"},{"name":"E-2 activity","type":"related"},{"name":"acireductone dioxygenase activity","type":"broad"}],"termid":"GO:0010308","terms_by_termid":{"GO:0010308":null}}


id: PBO:0069339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 599, pseudogene","termid":"PBO:0069339"}


id: PBO:0086755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; proposed to be an inactive evolutionary remnant that along with neighboring gene YOL162W may have constituted a second sulfonate transporter and SOA1 paralog that is intact in S. uvarum, S. eubayanus and S. arboricola and named SOA2; member of the Dal5p subfamily of the major facilitator family","termid":"PBO:0086755"}


id: FYPO:0002030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cable organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin cable. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["GO:0070648","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal actin filament bundle organization","termid":"FYPO:0005979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin cable organization","synonyms":[{"name":"abnormal actin cable organisation during vegetative growth","type":"exact"},{"name":"abnormal actin cable organization during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable organization during vegetative growth","type":"exact"},{"name":"abnormal formin-nucleated actin cable organization during vegetative growth","type":"exact"}],"termid":"FYPO:0002030"}


id: GO:0140832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + L-histidine(out) + Na+(out) = H+(out) + L-histidine(in) + Na+(in).","definition_xrefs":["PMID:11742981","PMID:10619430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine transmembrane transporter activity","termid":"GO:0005290"},{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"},{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-histidine, sodium:proton antiporter activity","secondary_identifiers":["RHEA:71135"],"termid":"GO:0140832"}


id: FYECO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing trehalose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose MM","synonyms":[{"name":"trehalose minimal medium","type":"exact"}],"termid":"FYECO:0000146"}


id: GO:1901947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process","synonyms":[{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolism","type":"exact"}],"termid":"GO:1901947"}


id: PBO:0083383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps CUP1-2","termid":"PBO:0083383"}


id: GO:0009232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).","definition_xrefs":["PMID:10961912","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin metabolic process","termid":"GO:0006771"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"riboflavin catabolic process","synonyms":[{"name":"riboflavin breakdown","type":"exact"},{"name":"riboflavin catabolism","type":"exact"},{"name":"riboflavin degradation","type":"exact"},{"name":"vitamin B2 catabolic process","type":"exact"},{"name":"vitamin B2 catabolism","type":"exact"},{"name":"vitamin G catabolic process","type":"exact"},{"name":"vitamin G catabolism","type":"exact"}],"termid":"GO:0009232"}


id: PR:O94656
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.05","synonyms":[{"name":"Spom972h-atg16","type":"exact"}],"termid":"PR:O94656"}


id: PBO:0067503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 643, pseudogene","termid":"PBO:0067503"}


id: PBO:0085382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; multidrug transporter mediates export of many different organic anions including oligomycin; homolog of human cystic fibrosis transmembrane receptor (CFTR)","termid":"PBO:0085382"}


id: PATO:0001144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001144 ig g concentration value (obsolete PATO:0001144)","termid":"PATO:0001144"}


id: FYPO:0002181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores and spheroid vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores and spheroid cells (obsolete FYPO:0002181)","synonyms":[{"name":"inviable mixed population including germinated spores and rounded cells","type":"exact"}],"termid":"FYPO:0002181"}


id: PBO:0089205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin Pex32","termid":"PBO:0089205"}


id: GO:0045150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetoin, 3-hydroxy-2-butanone.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"acetoin metabolic process","termid":"GO:0045149"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"acetoin catabolic process","synonyms":[{"name":"acetoin breakdown","type":"exact"},{"name":"acetoin catabolism","type":"exact"},{"name":"acetoin degradation","type":"exact"}],"termid":"GO:0045150"}


id: GO:1904302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maternal process involved in parturition.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:1849751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of maternal process involved in parturition","termid":"GO:1904301"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"maternal process involved in parturition","termid":"GO:0060137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of maternal process involved in parturition","synonyms":[{"name":"down regulation of maternal process involved in parturition","type":"exact"},{"name":"down-regulation of maternal process involved in parturition","type":"exact"},{"name":"downregulation of maternal process involved in parturition","type":"exact"},{"name":"inhibition of maternal process involved in parturition","type":"narrow"}],"termid":"GO:1904302"}


id: GO:2000208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ribosomal small subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ribosomal subunit export from nucleus","termid":"GO:2000202"},{"relation_name":"is_a","term_name":"regulation of ribosomal small subunit export from nucleus","termid":"GO:2000206"},{"relation_name":"positively_regulates","term_name":"ribosomal small subunit export from nucleus","termid":"GO:0000056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"positive regulation of ribosomal small subunit export from nucleus","synonyms":[{"name":"positive regulation of 30S ribosomal subunit export from nucleus","type":"related"},{"name":"positive regulation of 40S ribosomal subunit export from nucleus","type":"related"},{"name":"positive regulation of ribosomal small subunit export from cell nucleus","type":"exact"},{"name":"positive regulation of ribosomal small subunit export out of nucleus","type":"exact"},{"name":"positive regulation of ribosomal small subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of ribosomal small subunit-nucleus export","type":"exact"}],"termid":"GO:2000208"}


id: GO:0048777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leucophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leucophore differentiation","termid":"GO:0048775"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"leucophore differentiation","termid":"GO:0048772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leucophore differentiation","synonyms":[{"name":"activation of leucophore differentiation","type":"narrow"},{"name":"stimulation of leucophore differentiation","type":"narrow"},{"name":"up regulation of leucophore differentiation","type":"exact"},{"name":"up-regulation of leucophore differentiation","type":"exact"},{"name":"upregulation of leucophore differentiation","type":"exact"}],"termid":"GO:0048777"}


