# terms

id: _global:mereotopologically_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A mereological relationship or a topological relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mereotopologically_related_to","secondary_identifiers":["RO:0002323"],"termid":"_global:mereotopologically_related_to"}


id: GO:0120311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the conversion of an immature and partially assembled ciliary pro-basal body into a mature basal body that is capable of nucleating a cilium.","definition_xrefs":["GOC:krc","PMID:26862392","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"ciliary basal body organization","termid":"GO:0032053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"ciliary pro-basal body maturation","synonyms":[{"name":"flagellar pro-basal body maturation","type":"related"},{"name":"flagellar probasal body maturation","type":"related"},{"name":"pro-basal body maturation","type":"related"}],"termid":"GO:0120311"}


id: PBO:0110365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPCIP antisense RNA 1","termid":"PBO:0110365"}


id: PBO:0038674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 1","termid":"PBO:0038674"}


id: GO:0072732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of calcium ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to calcium ion starvation","synonyms":[{"name":"cellular response to calcium starvation","type":"exact"}],"termid":"GO:0072732"}


id: PBO:0069363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 623, pseudogene","termid":"PBO:0069363"}


id: PBO:0067076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 107, pseudogene","termid":"PBO:0067076"}


id: GO:0040009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate of growth of all or part of an organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth rate","termid":"GO:0040009"}


id: GO:0006291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The excision of damaged DNA during pyrimidine-dimer repair. A large multienzyme complex scans the DNA for a distortion in the double helix rather than for a specific base change. Once a bulky lesion is found, the phosphodiester backbone of the abnormal strand is cleaved on both sides of the distortion, and the portion of the strand containing the lesion (an oligonucleotide) is peeled away from the DNA double helix by a DNA helicase enzyme.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine-dimer repair, DNA damage excision (obsolete GO:0006291)","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage excision","type":"exact"}],"termid":"GO:0006291"}


id: GO:0043730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-ureido-4-imidazole carboxylate + H2O = 5-amino-4-imidazole carboxylate + NH3 + CO2.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"5-ureido-4-imidazole carboxylate hydrolase activity","termid":"GO:0043730"}


id: GO:0003291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structure of an atrial septum intermedium is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum morphogenesis","termid":"GO:0060413"},{"relation_name":"part_of","term_name":"atrial septum intermedium development","termid":"GO:0003286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum intermedium morphogenesis","termid":"GO:0003291"}


id: PR:Q09871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12G12.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.07c","synonyms":[{"name":"Spom972h-SPAC12G12.07c","type":"exact"}],"termid":"PR:Q09871"}


id: PBO:0059177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscle RAS oncogene homolog","termid":"PBO:0059177"}


id: FYPO:0006704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sedoheptulose-7-phosphate measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular sedoheptulose-7-phosphate level","synonyms":[{"name":"decreased cellular sedoheptulose-7-phosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sedoheptulose-7-phosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular sedoheptulose-7-phosphate level","type":"exact"}],"termid":"FYPO:0006704"}


id: FYPO:0007515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which RNA stability is decreased during a cellular response to oxidative stress. RNA molecules are more likely to degrade over a given time period than in wild type. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:14633985","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA stability","termid":"FYPO:0003038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA stability during cellular response to oxidative stress","synonyms":[{"name":"decreased RNA stability during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA stability during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"decreased RNA stability in response to oxidative stress","type":"exact"},{"name":"reduced RNA stability during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007515"}


id: GO:0106006
data:
  {"annotated_genes":["SJAG_00700","SJAG_00368","SJAG_03596","SJAG_02737","SJAG_04479","SJAG_00397","SJAG_03264","SJAG_03673","SJAG_03564","SJAG_04077","SJAG_00268","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88707,98546,98859,99083,102304,102700,102701,107982,108419,108878,110064,113048,113134],"is_not":false,"summary":null,"term":"GO:0106006"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a cytoskeletal protein or protein complex and a plasma membrane lipid or membrane-associated protein, in order to maintain the localization of the cytoskeleton at a specific cortical membrane location.","definition_xrefs":["PMID:25736293","PMID:30840879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal anchor activity","termid":"GO:0008093"},{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00268":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00700":null,"SJAG_01143":null,"SJAG_02737":null,"SJAG_03264":null,"SJAG_03564":null,"SJAG_03596":null,"SJAG_03673":null,"SJAG_04077":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0008093"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0008093","GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"cytoskeletal protein-membrane anchor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0140362"],"synonyms":[{"name":"BAR domain adaptor","type":"narrow"},{"name":"F-BAR domain adaptor","type":"narrow"},{"name":"cytoskeletal protein membrane adaptor","type":"broad"},{"name":"cytoskeletal protein membrane anchor activity","type":"broad"},{"name":"cytoskeletal protein membrane tether activity","type":"broad"},{"name":"cytoskeletal protein to membrane recruiting activity","type":"exact"},{"name":"cytoskeletal protein-membrane adaptor activity","type":"broad"},{"name":"membrane-cytoskeletal protein anchor activity","type":"broad"},{"name":"membrane-cytoskeletal protein tether activity","type":"broad"},{"name":"microtubule cortical anchor activity","type":"narrow"}],"termid":"GO:0106006","terms_by_termid":{"GO:0106006":null}}


id: PBO:0086129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086129"}


id: FYPO:0005972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of proton export is decreased during a cellular response to glucose stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased proton export during cellular response to glucose stimulus","synonyms":[{"name":"decreased H+ ion export during cellular response to glucose stimulus","type":"related"},{"name":"decreased hydrogen ion export during cellular response to glucose stimulus","type":"exact"},{"name":"decreased proton export across plasma membrane during cellular response to glucose stimulus","type":"exact"},{"name":"decreased proton export during cellular response to glucose stimulus during mitotic cell cycle","type":"related"},{"name":"decreased proton export from cell during cellular response to glucose stimulus","type":"exact"},{"name":"reduced proton export during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0005972"}


id: PBO:0087392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S/T kinase and catalytic subunit of DDK (Dbf4-dependent kinase); required for origin firing and replication initiation; phosphorylates MCM subunits and Cdc45 to drive assembly of the pre-IC and the CMG helicase; maintains Cse4p at kinetochores through phosphorylation to regulate chromosome segregation, regulates pre-meiotic replication, meiotic DSB formation, monopolar attachment of homologs during MI through monopolin recruitment and middle meiotic gene expression; HsCDC7 and DBF4 complement","termid":"PBO:0087392"}


id: PBO:0071722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 20","termid":"PBO:0071722"}


id: PBO:0089359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity implicated in DNA repair","termid":"PBO:0089359"}


id: PBO:0003451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit Cdc27","termid":"PBO:0003451"}


id: PBO:0045158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 14","termid":"PBO:0045158"}


id: PBO:0088730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A thioesterase The13","termid":"PBO:0088730"}


id: PBO:0005632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIb (predicted)","termid":"PBO:0005632"}


id: FYPO:0006544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during mitosis. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"decreased transcription during mitosis","synonyms":[{"name":"decreased transcription during cellular response to calcium ion during mitotic M phase","type":"related"},{"name":"decreased transcription during mitosis during vegetative growth","type":"exact"},{"name":"decreased transcription during mitotic nuclear division","type":"exact"},{"name":"reduced transcription during mitosis","type":"exact"}],"termid":"FYPO:0006544"}


id: GO:0120270
data:
  {"annotated_genes":["SJAG_02723","SJAG_03883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[102762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of selective degradation of meiosis-specific nuclear transcribed transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.","definition_xrefs":["GOC:krc","PMID:24920274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","termid":"GO:0033621"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02723":null,"SJAG_03883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120270","terms_by_termid":{"GO:0120271":null,"GO:0120272":null}}


id: PBO:0051619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 2 pseudogene 1","termid":"PBO:0051619"}


id: GO:1904443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thyroid gland epithelial cell proliferation.","definition_xrefs":["PMID:17646383","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of thyroid gland epithelial cell proliferation","termid":"GO:1904441"},{"relation_name":"positively_regulates","term_name":"thyroid gland epithelial cell proliferation","termid":"GO:1990789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thyroid gland epithelial cell proliferation","synonyms":[{"name":"activation of Hurthle cell proliferation","type":"narrow"},{"name":"activation of thyroid follicular cell proliferation","type":"narrow"},{"name":"activation of thyroid gland epithelial cell proliferation","type":"narrow"},{"name":"positive regulation of Hurthle cell proliferation","type":"narrow"},{"name":"positive regulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"up regulation of Hurthle cell proliferation","type":"narrow"},{"name":"up regulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"up regulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"up-regulation of Hurthle cell proliferation","type":"narrow"},{"name":"up-regulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"up-regulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"upregulation of Hurthle cell proliferation","type":"narrow"},{"name":"upregulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"upregulation of thyroid gland epithelial cell proliferation","type":"exact"}],"termid":"GO:1904443"}


id: PBO:0076357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 4","termid":"PBO:0076357"}


id: PBO:0088961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A regulatory subunit, PTPA family Ypa1","termid":"PBO:0088961"}


id: GO:0016969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An oxygen carrier found in a few groups of invertebrates, e.g. sipunculid worms, certain molluscs, and crustaceans.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete hemerythrin (obsolete GO:0016969)","synonyms":[{"name":"hemerythrin","type":"exact"}],"termid":"GO:0016969"}


id: PBO:0063362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 1 inhibitor","termid":"PBO:0063362"}


id: PATO:0001150
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001150 absolute susceptibility value (obsolete PATO:0001150)","termid":"PATO:0001150"}


id: PBO:0085918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions","termid":"PBO:0085918"}


id: PBO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAP42 family protein involved in TOR signalling (predicted)","termid":"PBO:0005298"}


id: GO:0061323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the heart.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}


id: GO:0071609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 5 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 5 production","synonyms":[{"name":"CCL5 production","type":"exact"},{"name":"RANTES production","type":"exact"},{"name":"Regulated upon Activation, Normal T-cell Expressed, and Secreted production","type":"exact"}],"termid":"GO:0071609"}


id: PR:Q9P7H6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saf3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1782.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.03","synonyms":[{"name":"Spom972h-saf3","type":"exact"}],"termid":"PR:Q9P7H6"}


id: PATO:0002392
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located on a sloping line joining two nonconsecutive points of an entity relative to another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diagonal to","termid":"PATO:0002392"}


id: GO:0043884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + corrinoid protein = CO + methylcorrinoid protein + CoA.","definition_xrefs":["EC:2.3.1.169","PMID:1748656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"CO-methylating acetyl-CoA synthase activity","secondary_identifiers":["RHEA:45212","MetaCyc:ACETYLSYNCLTH-RXN"],"synonyms":[{"name":"ACS","type":"related"},{"name":"CO-methylating acetyl-coenzyme A synthase activity","type":"exact"},{"name":"acetyl-CoA synthase activity","type":"broad"},{"name":"acetyl-CoA:corrinoid protein O-acetyltransferase activity","type":"exact"}],"termid":"GO:0043884"}


id: GO:1904881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen sulfide stimulus.","definition_xrefs":["PMID:24012591","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to hydrogen sulfide","termid":"GO:1904880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hydrogen sulfide","synonyms":[{"name":"cellular response to dihydridosulfur","type":"exact"},{"name":"cellular response to sulfane","type":"exact"}],"termid":"GO:1904881"}


id: PBO:0064500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit C pseudogene 1","termid":"PBO:0064500"}


id: GO:2000141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of octopamine signaling pathway involved in response to food.","definition_xrefs":["PMID:19609300","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to food","termid":"GO:0032097"},{"relation_name":"is_a","term_name":"positive regulation of octopamine signaling pathway","termid":"GO:2000130"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway involved in response to food","termid":"GO:2000139"},{"relation_name":"positively_regulates","term_name":"octopamine signaling pathway involved in response to food","termid":"GO:0071935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of octopamine signaling pathway involved in response to food","synonyms":[{"name":"positive regulation of octopamine signalling pathway involved in response to food","type":"exact"}],"termid":"GO:2000141"}


id: PBO:0043479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canopy FGF signaling regulator 2","termid":"PBO:0043479"}


id: PR:000036299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase small chain that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PMID:12867051","PomBase:MAH","PMID:20516199","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase small chain","termid":"PR:000027713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase small chain (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC25D12.04","synonyms":[{"name":"SPBC25D12.04","type":"related"},{"name":"SUC22","type":"related"},{"name":"Spom-suc22","type":"exact"}],"termid":"PR:000036299"}


id: GO:0075195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont haustorium mother cell formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of haustorium mother cell formation","termid":"GO:0075193"},{"relation_name":"negatively_regulates","term_name":"haustorium mother cell formation","termid":"GO:0075192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of haustorium mother cell formation","synonyms":[{"name":"negative regulation of haustorium mother cell formation on or near host","type":"exact"}],"termid":"GO:0075195"}


id: PBO:0085232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS-domain containing serine/threonine protein kinase; regulates sugar flux and translation in response to an unknown metabolite by phosphorylating Ugp1p and Gsy2p (sugar flux) and Caf20p, Tif11p and Sro9p (translation); PSK2 has a paralog, PSK1, that arose from the whole genome duplication","termid":"PBO:0085232"}


id: GO:0045855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pole plasm oskar mRNA localization","termid":"GO:0007317"},{"relation_name":"is_a","term_name":"negative regulation of intracellular mRNA localization","termid":"GO:1904581"},{"relation_name":"negatively_regulates","term_name":"pole plasm oskar mRNA localization","termid":"GO:0045451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pole plasm oskar mRNA localization","synonyms":[{"name":"down regulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"down-regulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"downregulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"inhibition of pole plasm oskar mRNA localization","type":"narrow"},{"name":"negative regulation of oocyte pole plasm oskar mRNA localization","type":"exact"},{"name":"negative regulation of pole plasm oskar mRNA localisation","type":"exact"}],"termid":"GO:0045855"}


id: PBO:0084625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionyl-tRNA synthetase; forms a complex with Gus1p, a glutamyl-tRNA synthetase, and Arc1p, which increases the catalytic efficiency of both synthetases; involved in the nuclear export of tRNAs; mutations in human ortholog MARS is associated with pediatric pulmonary alveolar proteinosis, interstitial lung and liver disease, and Charcot-Marie-Tooth disease; human MARS gene can complement the yeast null mutant","termid":"PBO:0084625"}


id: GO:0018933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["ISBN:0198547684","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine metabolic process","synonyms":[{"name":"nicotine metabolism","type":"exact"}],"termid":"GO:0018933"}


id: PBO:0109608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A20","termid":"PBO:0109608"}


id: GO:1903929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a primary palate over time, from its formation to the mature structure.","definition_xrefs":["PMID:24644145","PMID:25504820","GOC:mgi_curators","GOC:TermGenie","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roof of mouth development","termid":"GO:0060021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary palate development","synonyms":[{"name":"palatum primarium development","type":"related"},{"name":"primary palate process development","type":"exact"},{"name":"primitive palate development","type":"related"},{"name":"processus palatinus medianus development","type":"related"}],"termid":"GO:1903929"}


id: PATO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along dorso-ventral axis.","definition_xrefs":["PATOC:MSP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorso-ventrally flattened","termid":"PATO:0002053"}


id: PBO:0087739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Snt2C complex; physically associates with Snt2p and Rpd3p; along with Snt2p, recruits Rpd3p to a small number of promoters; also colocalizes with Snt2p, independently of Rpd3p, to promoters of stress response genes in response to oxidative stress; contains ATP/GTP-binding site motif A; null mutant exhibits increased cellular volume, large drooping buds with elongated necks; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087739"}


id: FYPO:0002601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation is normal. All histone H2A phosphorylation may be assayed, or phosphorylation of specific sites on histone H2A may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone phosphorylation during vegetative growth","termid":"FYPO:0002595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H2A phosphorylation during vegetative growth","synonyms":[{"name":"normal histone H2A phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002601"}


id: FYPO:0005372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which circular minichromosomes are lost at a higher frequency than normal during the vegetative growth phase of the life cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah","PMID:11226171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss during vegetative growth","termid":"FYPO:0001840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased circular minichromosome loss during vegetative growth","synonyms":[{"name":"increased circular minichromosome loss during mitotic cell cycle","type":"related"},{"name":"mitotic circular minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0005372"}


id: PBO:0066327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of calcineurin 1","termid":"PBO:0066327"}


id: PBO:0060088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 35","termid":"PBO:0060088"}


id: GO:0046157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"siroheme metabolic process","termid":"GO:0046156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"siroheme catabolic process","synonyms":[{"name":"sirohaem catabolic process","type":"exact"},{"name":"sirohaem catabolism","type":"exact"},{"name":"siroheme breakdown","type":"exact"},{"name":"siroheme catabolism","type":"exact"},{"name":"siroheme degradation","type":"exact"}],"termid":"GO:0046157"}


id: PBO:0028719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_monopolar_index","termid":"PBO:0028719"}


id: MOD:00375
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4,5-dihydroxy-L-lysine.","definition_xrefs":["RESID:AA0370","Unimod:425#K","PubMed:10978343","PubMed:12686488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated lysine","termid":"MOD:00681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4,5-dihydroxy-L-lysine","synonyms":[{"name":"(2S,4Xi,5Xi)-2,6-diamino-4,5-dihydroxyhexanoic acid","type":"exact"},{"name":"4,5-dihydroxy-L-lysine","type":"exact"},{"name":"4,5-dihydroxylated L-lysine","type":"exact"},{"name":"45Hy2Lys","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"MOD_RES 4,5-dihydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-delta,gamma-dihydroxycaproic acid","type":"exact"},{"name":"delta,gamma-dihydroxylysine","type":"exact"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:00375"}


id: GO:0052195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement on or near other organism involved in symbiotic interaction (obsolete GO:0052195)","synonyms":[{"name":"movement on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052195"}


id: GO:0003720
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104046,104047],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003721"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes extension of the 3'- end of a DNA strand by one deoxynucleotide at a time using an internal RNA template that encodes the telomeric repeat sequence.","definition_xrefs":["PMID:28732250","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed DNA polymerase activity","termid":"GO:0003964"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0140097","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"telomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-163090","Reactome:R-HSA-164617"],"termid":"GO:0003720","terms_by_termid":{"GO:0003721":null}}


id: GO:0030624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U6atac small nuclear RNA (U6atac snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"U6atac snRNA binding","termid":"GO:0030624"}


id: PBO:0078766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (ATT) 1-1","termid":"PBO:0078766"}


id: GO:1905159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of Factor XII activation.","definition_xrefs":["GOC:TermGenie","PMID:617517","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Factor XII activation (obsolete GO:1905159)","synonyms":[{"name":"down regulation of Factor XII activation","type":"exact"},{"name":"down regulation of Hageman factor activation","type":"exact"},{"name":"down-regulation of Factor XII activation","type":"exact"},{"name":"down-regulation of Hageman factor activation","type":"exact"},{"name":"downregulation of Factor XII activation","type":"exact"},{"name":"downregulation of Hageman factor activation","type":"exact"},{"name":"inhibition of Factor XII activation","type":"narrow"},{"name":"inhibition of Hageman factor activation","type":"narrow"},{"name":"negative regulation of Hageman factor activation","type":"exact"}],"termid":"GO:1905159"}


id: PBO:0036487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga1","termid":"PBO:0036487"}


id: PBO:0086083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; acts in a complex with Pmt5p, can instead interact with Pmt1p in some conditions; antifungal drug target; PMT3 has a paralog, PMT2, that arose from the whole genome duplication","termid":"PBO:0086083"}


id: MOD:00513
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex(2) HexNAc","definition_xrefs":["Unimod:145","PubMed:1694179","PubMed:111247","PubMed:5490222","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"HexNAc1dHex2 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(1)dHex(2)","type":"related"},{"name":"HexNAc1dHex2","type":"related"}],"termid":"MOD:00513"}


id: PBO:0003787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family (predicted)","termid":"PBO:0003787"}


id: PBO:0043431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 3","termid":"PBO:0043431"}


id: PBO:0034293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-attached_to","termid":"PBO:0034293"}


id: PBO:0081323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 114","termid":"PBO:0081323"}


id: GO:0043103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates hypoxanthine, 6-hydroxy purine, from derivatives of it without de novo synthesis.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase salvage","termid":"GO:0043096"},{"relation_name":"is_a","term_name":"hypoxanthine biosynthetic process","termid":"GO:0046101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"hypoxanthine salvage","synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"narrow"},{"name":"guanine, xanthine and their nucleoside salvage","type":"narrow"}],"termid":"GO:0043103"}


id: GO:0051763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sesquiterpenes, any of a class of terpenes of the formula C15H24 or a derivative of such a terpene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"},{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sesquiterpene catabolic process","termid":"GO:0051763"}


id: PBO:0030878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vegetative_cell_population_growth","termid":"PBO:0030878"}


id: PBO:0063010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 2","termid":"PBO:0063010"}


id: PBO:0051944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-tetrakisphosphate 1-kinase","termid":"PBO:0051944"}


id: PBO:0000577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein (predicted)","termid":"PBO:0000577"}


id: GO:0010448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a vegetative meristem, a population of undifferentiated cells in a plant shoot which maintains a continuous balance between the production of stem cells and the incorporation of their derivatives into lateral organ primordia.","definition_xrefs":["ISBN:0849397928","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem growth","termid":"GO:0035266"},{"relation_name":"is_a","term_name":"developmental vegetative growth","termid":"GO:0080186"},{"relation_name":"part_of","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vegetative meristem growth","termid":"GO:0010448"}


id: GO:0090254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell elongates and contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell elongation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090254"}


id: PATO:0001354
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A optical quality inhering in a bearer by virtue of the bearer's exhibiting low opacity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opacity","termid":"PATO:0000957"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translucent","termid":"PATO:0001354"}


id: FYPO:0007595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is increased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mitophagy","termid":"FYPO:0000501"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased mitophagy during nitrogen starvation","synonyms":[{"name":"increased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"increased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"increased autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007595"}


id: SO:0000710
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding an mRNA that has the stop codon redefined as selenocysteine.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_redefined_as_selenocysteine","termid":"SO:0000885"},{"relation_name":"is_a","term_name":"gene_with_stop_codon_read_through","termid":"SO:0000697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_redefined_as_selenocysteine","synonyms":[{"name":"gene with stop codon redefined as selenocysteine","type":"exact"}],"termid":"SO:0000710"}


id: FYPO:0002342
data:
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id: PBO:0030262
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_trichodermin","termid":"PBO:0030262"}


id: PBO:0078079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated protein 1","termid":"PBO:0078079"}


id: GO:1903079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any negative regulation of protein localization to cell tip that is involved in positive regulation of establishment of cell polarity regulating cell shape.","definition_xrefs":["GOC:TermGenie","PMID:24554432","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape (obsolete GO:1903079)","synonyms":[{"name":"down regulation of protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"down regulation of protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"down-regulation of protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"down-regulation of protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"downregulation of protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"downregulation of protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"inhibition of protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"narrow"},{"name":"inhibition of protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"narrow"},{"name":"negative regulation of protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"negative regulation of protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"}],"termid":"GO:1903079"}


id: GO:0000785
data:
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id: MOD:00049
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id: FYPO:0005345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation begins during interphase of the cell cycle.","definition_xrefs":["PMID:9808627","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic sister chromatid separation","termid":"FYPO:0000416"},{"relation_name":"is_a","term_name":"mitotic sister chromatid separation in absence of mitotic spindle","termid":"FYPO:0007125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"mitotic sister chromatid separation during interphase","synonyms":[{"name":"advanced mitotic sister chromatid separation during interphase","type":"exact"},{"name":"chromosome separation during interphase during vegetative growth","type":"exact"},{"name":"mitotic chromosome separation during interphase","type":"exact"},{"name":"premature mitotic sister chromatid separation during interphase","type":"exact"},{"name":"premature sister chromatid separation during interphase of mitotic cell cycle","type":"related"},{"name":"sister chromatid separation during mitotic interphase","type":"exact"}],"termid":"FYPO:0005345"}


id: GO:0021911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the synthesis and degradation of retionic acid that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GOC:jid","GOC:dph","PMID:11262869","GOC:dgh","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"},{"relation_name":"part_of","term_name":"spinal cord anterior/posterior patterning","termid":"GO:0021512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"retinoic acid metabolic process in spinal cord anterior-posterior patterning","synonyms":[{"name":"retinoic acid metabolism in spinal cord anterior-posterior patterning","type":"exact"}],"termid":"GO:0021911"}


id: PR:P26359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msh3 gene.","definition_xrefs":["UniProtKB:P26359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein msh3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.03","synonyms":[{"name":"MutS protein homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-msh3","type":"exact"},{"name":"mating-type switching protein swi4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P26359"}


id: MOD:00339
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteinyl hydrogenase diiron subcluster.","definition_xrefs":["Unimod:439#C","RESID:AA0334","PubMed:10694885","PubMed:9836629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl hydrogenase diiron subcluster","synonyms":[{"name":"1,7-biscarbonyl-1-(cystein-S-yl)-8-oxo-4-aza-2lambda(3),6 lambda(3)-dithia-1,7-diferratricyclo[4.2.0.0(2,7)]octane-1,7-dicarbonitrile","type":"exact"},{"name":"Diironsubcluster","type":"related"},{"name":"L-cysteinyl hydrogenase diiron subcluster","type":"exact"},{"name":"METAL Diiron subcluster","type":"exact"},{"name":"hydrogenase diiron subcluster","type":"related"},{"name":"mu-carbonyl-dicarbonyl-1kappaC,2kappaC-dicyanido-1kappaC,2kappaC-cysteinato-1kS-1,2-azadimethanthiol-1kS,2kS'-diiron","type":"exact"}],"termid":"MOD:00339"}


id: GO:0047194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-(indol-3-ylacetyl)-beta-D-glucose + myo-inositol = 1L-1-O-(indol-3-yl)acetyl-myo-inositol + D-glucose.","definition_xrefs":["RHEA:21180","EC:2.3.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"indoleacetylglucose-inositol O-acyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04333","MetaCyc:2.3.1.72-RXN"],"synonyms":[{"name":"1-O-(indol-3-yl)acetyl-beta-D-glucose:myo-inositol (indol-3-yl)acetyltransferase activity","type":"related"},{"name":"1-O-(indol-3-ylacetyl)-beta-D-glucose:myo-inositol indole-3-ylacetyltransferase activity","type":"related"},{"name":"indole-3-acetyl-beta-1-D-glucoside:myo-inositol indoleacetyltransferase activity","type":"related"}],"termid":"GO:0047194"}


id: GO:0014889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in the muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle atrophy","secondary_identifiers":["Wikipedia:Muscle_atrophy"],"termid":"GO:0014889"}


id: GO:0045119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + azole(in) = H+(in) + azole(out). Azoles are heterocyclic compounds found in many biologically important substances.","definition_xrefs":["GOC:ai","ISBN:3527307206","Wikipedia:Azole"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"azole:proton antiporter activity","synonyms":[{"name":"azole:hydrogen antiporter activity","type":"exact"},{"name":"bicyclomycin/sulfathiazole:hydrogen antiporter activity","type":"narrow"}],"termid":"GO:0045119"}


id: PBO:0065078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA primase subunit 1","termid":"PBO:0065078"}


id: GO:1901977
data:
  {"annotated_genes":["SJAG_00883","SJAG_03126","SJAG_02336","SJAG_01297","SJAG_03353","SJAG_01679","SJAG_04259","SJAG_02451","SJAG_03681","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100013,104361,108069,86870,109895,112004,95706,110376,103339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell cycle checkpoint.","definition_xrefs":["PMID:23028116","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell cycle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001048"],"synonyms":[{"name":"down regulation of cell cycle checkpoint","type":"exact"},{"name":"down-regulation of cell cycle checkpoint","type":"exact"},{"name":"downregulation of cell cycle checkpoint","type":"exact"},{"name":"inhibition of cell cycle checkpoint","type":"narrow"},{"name":"negative regulation of G1/S checkpoint","type":"related"},{"name":"negative regulation of G1/S transition checkpoint","type":"related"}],"termid":"GO:1901977","terms_by_termid":{"GO:0140499":null,"GO:1902426":null}}


id: FYPO:0003653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription elongation from an RNA polymerase III promoter occurs to a normal (i.e. indistinguishable from wild type) extent.","definition_xrefs":["GO:0006385","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000294","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal transcription elongation from RNA polymerase III promoter during vegetative growth","synonyms":[{"name":"normal transcription elongation from RNA polymerase III promoter during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003653"}


id: GO:0008157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein phosphatase 1.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein phosphatase 1 binding","termid":"GO:0008157"}


id: PBO:0091132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial LYR family protein","termid":"PBO:0091132"}


id: PBO:0048405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS8 antisense RNA 1","termid":"PBO:0048405"}


id: PBO:0055429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2859","termid":"PBO:0055429"}


id: GO:0018420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via N6-(L-isoaspartyl)-L-lysine (obsolete GO:0018420)","termid":"GO:0018420"}


id: GO:0001217
data:
  {"annotated_genes":["SJAG_04009","SJAG_04584","SJAG_00987","SJAG_04813","SJAG_02898","SJAG_03473","SJAG_00124","SJAG_00792","SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102355,89417,90854,79300,112183,90191,104917,100558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001227"},{"annotations":[92523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106250"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00792":null,"SJAG_00987":null,"SJAG_02730":null,"SJAG_02898":null,"SJAG_03473":null,"SJAG_04009":null,"SJAG_04584":null,"SJAG_04813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0140110","GO:0003700","GO:0003674"],"is_obsolete":false,"name":"DNA-binding transcription repressor activity","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001218","GO:0001219","GO:0001220","GO:0001141"],"synonyms":[{"name":"bacterial-type DNA binding transcription repressor activity","type":"narrow"},{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, cadmium ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, copper ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding","type":"narrow"},{"name":"cadmium ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"copper ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"transcriptional repressor activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional repressor activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0001217","terms_by_termid":{"GO:0001227":null,"GO:0106250":null}}


id: SO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature fusion where the deletion brings together transcript regions.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_fusion","termid":"SO:0001882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_fusion","synonyms":[{"name":"transcript fusion","type":"exact"}],"termid":"SO:0001886"}


id: GO:0031095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the platelet dense tubular network.","definition_xrefs":["GOC:mah","PMID:1322202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"platelet dense tubular network","termid":"GO:0031094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"platelet dense tubular network membrane","termid":"GO:0031095"}


id: GO:0031131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which one cell or group of cells receives, transduces, and responds to a signal generated by another cell or group of cells of different ancestry and developmental potential, such that the recipient cell(s) undergo a developmental change.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete reception of an inductive signal (obsolete GO:0031131)","termid":"GO:0031131"}


id: GO:0034974
data:
  {"annotated_genes":["SJAG_01495","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84103,106405],"is_not":false,"summary":null,"term":"GO:0034974"}]},"cv_name":"cellular_component","definition":"A protein complex involved that contains proteins known in Schizosaccharomyces as Swi5 monomers and Swi2, and is involved in mating type switching.","definition_xrefs":["PMID:14663140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01495":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"Swi5-Swi2 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Swi5 complex","type":"broad"}],"termid":"GO:0034974","terms_by_termid":{"GO:0034974":null}}


id: GO:0071282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(II) ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron(II) ion","termid":"GO:0010040"},{"relation_name":"is_a","term_name":"cellular response to iron ion","termid":"GO:0071281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to iron(II) ion","synonyms":[{"name":"cellular response to iron(II)","type":"exact"}],"termid":"GO:0071282"}


id: GO:0060351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cartilage that will provide a scaffold for mineralization of endochondral bones.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage development","termid":"GO:0051216"},{"relation_name":"part_of","term_name":"endochondral bone morphogenesis","termid":"GO:0060350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage development involved in endochondral bone morphogenesis","termid":"GO:0060351"}


id: PBO:0074517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A9","termid":"PBO:0074517"}


id: PBO:0072344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 30","termid":"PBO:0072344"}


id: FYPO:0006907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type) when the cell re-enters the mitotic cell cycle following nitrogen starvation-induced arrest in G1 phase. A mitotic cell size control checkpoint normally prevents cell cycle progression from G1 to S phase until the cell reaches a certain size.","definition_xrefs":["PMID:872890","PomBase:mah","GO:0031568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G1 cell size control checkpoint","termid":"FYPO:0006905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000631","FYPO:0000298","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic G1 cell size control checkpoint following nitrogen starvation-induced arrest in G1 phase","synonyms":[{"name":"normal G1 cell size control checkpoint following nitrogen starvation-induced arrest in G1 phase during mitotic cell cycle","type":"related"},{"name":"normal mitotic G1 cell size control checkpoint activation following nitrogen starvation-induced arrest in G1 phase","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint following nitrogen starvation-induced G1 phase arrest","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint following nitrogen starvation-induced arrest in G1 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0006907"}


id: PBO:0089070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S6","termid":"PBO:0089070"}


id: PBO:0056942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9-2","termid":"PBO:0056942"}


id: PBO:0031151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_papulacandin_B","termid":"PBO:0031151"}


id: PBO:0053371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 294","termid":"PBO:0053371"}


id: SO:0000260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a glutamic acid anticodon, and a 3' glutamic acid binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"glutamine_tRNA_primary_transcript","termid":"SO:0000217"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl_tRNA","synonyms":[{"name":"glutamyl tRNA","type":"exact"},{"name":"glutamyl-transfer RNA","type":"related"},{"name":"glutamyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000260"}


id: GO:0006246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dTDP, deoxyribosylthymine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009198"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dTDP metabolic process","termid":"GO:0046072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dTDP catabolic process","synonyms":[{"name":"dTDP breakdown","type":"exact"},{"name":"dTDP catabolism","type":"exact"},{"name":"dTDP degradation","type":"exact"}],"termid":"GO:0006246"}


id: PBO:0041213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 1","termid":"PBO:0041213"}


id: GO:0150021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an apical dendrite are generated and organized.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:22683681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"part_of","term_name":"apical dendrite development","termid":"GO:0150022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical dendrite morphogenesis","termid":"GO:0150021"}


id: GO:0106272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the endoplasmic reticulum-Golgi intermediate compartment (ERGIC).","definition_xrefs":["PMID:32272059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to ERGIC","termid":"GO:0106272"}


id: PBO:0068967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 211, pseudogene","termid":"PBO:0068967"}


id: GO:0009035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to give random double-stranded fragments with terminal 5' or 3' protrusions, driven by ATP hydrolysis. Cleavage is dependent on the presence in the DNA of a specific recognition site. Cleavage may occur hundreds or thousands of base pairs away from the recognition site due to translocation of DNA.","definition_xrefs":["PMID:15788748","PMID:15300241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA translocase activity","termid":"GO:0015616"},{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"},{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"type I site-specific deoxyribonuclease activity","secondary_identifiers":["EC:3.1.21.3","MetaCyc:3.1.21.3-RXN"],"synonyms":[{"name":"ATP-dependent DNase activity","type":"related"},{"name":"adenosine triphosphate-dependent deoxyribonuclease activity","type":"related"},{"name":"deoxyribonuclease (ATP- and S-adenosyl-L-methionine-dependent)","type":"related"},{"name":"deoxyribonuclease (adenosine triphosphate-hydrolyzing)","type":"related"},{"name":"type I restriction enzyme activity","type":"exact"}],"termid":"GO:0009035"}


id: PBO:0029351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hydroxyurea","termid":"PBO:0029351"}


id: GO:0044172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex system of membrane-bounded compartments located between host cell endoplasmic reticulum (ER) and the host Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum-Golgi intermediate compartment","synonyms":[{"name":"host ER-Golgi intermediate compartment","type":"exact"},{"name":"host cell ER-Golgi intermediate compartment","type":"exact"}],"termid":"GO:0044172"}


id: PBO:0039804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 1 pseudogene 2","termid":"PBO:0039804"}


id: FYPO:0002381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3 acetylation occurs to a greater extent than normal in centromere outer repeat regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002381"}


id: PBO:0002603
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.3.5","termid":"PBO:0002603"}


id: PATO:0001595
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 1-D extent quality inhering in a bearer by virtue of the bearer's downward or backward or inward dimenision.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-D extent","termid":"PATO:0001708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depth","termid":"PATO:0001595"}


id: PBO:0045464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D1","termid":"PBO:0045464"}


id: PBO:0083985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine synthetase (GS); synthesizes glutamine from glutamate and ammonia; with Glt1p, forms the secondary pathway for glutamate biosynthesis from ammonia; expression regulated by nitrogen source and by amino acid limitation; forms filaments of back-to-back stacks of cylindrical homo-decamers at low pH, leading to enzymatic inactivation and storage during states of advanced cellular starvation; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0083985"}


id: PBO:0058627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6759","termid":"PBO:0058627"}


id: PBO:0108706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex WD repeat subunit Ski8","termid":"PBO:0108706"}


id: GO:0009692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene metabolic process","synonyms":[{"name":"ethene metabolic process","type":"exact"},{"name":"ethene metabolism","type":"exact"},{"name":"ethylene metabolism","type":"exact"}],"termid":"GO:0009692"}


id: PBO:0047446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIb","termid":"PBO:0047446"}


id: PBO:0076221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT4 homolog, DSIF elongation factor subunit","termid":"PBO:0076221"}


id: PBO:0048830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 14","termid":"PBO:0048830"}


id: PBO:0056449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3 pseudogene 1","termid":"PBO:0056449"}


id: GO:0044162
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell cytoplasmic vesicle.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell cytoplasmic vesicle","termid":"GO:0044161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"}


id: RO:0002585
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_closure_of","termid":"RO:0002585"}


id: GO:0000064
data:
  {"annotated_genes":["SJAG_00626","SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94359,104016],"is_not":false,"summary":null,"term":"GO:0000064"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-ornithine from one side of a membrane to the other. L-ornithine is 2,5-diaminopentanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_00626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-ornithine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70634"],"synonyms":[{"name":"L-ornithine transporter activity","type":"broad"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"related"}],"termid":"GO:0000064","terms_by_termid":{"GO:0000064":null}}


id: PBO:0070147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 61 pseudogene","termid":"PBO:0070147"}


id: GO:0019262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylneuraminate metabolic process","termid":"GO:0006054"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"N-acetylneuraminate catabolic process","secondary_identifiers":["MetaCyc:P441-PWY"],"synonyms":[{"name":"N-acetylneuraminate breakdown","type":"exact"},{"name":"N-acetylneuraminate catabolism","type":"exact"},{"name":"N-acetylneuraminate degradation","type":"exact"}],"termid":"GO:0019262"}


id: FYPO:0000429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G0 to G1 transition begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G0 to G1 transition","termid":"FYPO:0002955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"delayed G0 to G1 transition","synonyms":[{"name":"delayed G0/G1 transition","type":"exact"},{"name":"delayed exit from G0","type":"exact"},{"name":"delayed exit from cell quiescence","type":"exact"},{"name":"slow cell population growth following nitrogen starvation","type":"related"}],"termid":"FYPO:0000429"}


id: PBO:0081047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 3","termid":"PBO:0081047"}


id: PBO:0074491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snail family transcriptional repressor 2","termid":"PBO:0074491"}


id: PR:Q9USG9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosyl-DNA phosphodiesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12415:SF0","OMA:SCHPO04352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.05","secondary_identifiers":["UniProtKB:Q9USG9"],"synonyms":[{"name":"Spom972h-TDP1","type":"exact"},{"name":"Tyr-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USG9"}


id: PBO:0043934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytotoxic and regulatory T cell molecule","termid":"PBO:0043934"}


id: PBO:0074902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 74B","termid":"PBO:0074902"}


id: PBO:0110462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACO2 pseudogene 1","termid":"PBO:0110462"}


id: GO:1900112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K9 trimethylation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 trimethylation (obsolete GO:1900112)","termid":"GO:1900112"}


id: MOD:00234
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-glutathionyl-L-cysteine.","definition_xrefs":["ChEBI:21264","DeltaMass:0","Unimod:55","OMSSA:51","PubMed:3083866","PubMed:8344916","RESID:AA0229"],"direct_ancestors":[{"relation_name":"contains","term_name":"S-(cysteinyl-glycyl)-L-cysteine","termid":"MOD:02026"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine glutathione disulfide","synonyms":[{"name":"(2S)-2-amino-3-((2S)-2-((4R)-4-amino-4-carboxyl-1-oxobutyl)amino-3-(carboxylmethyl)amino-3-oxo-propyl)dithio-propanoic acid","type":"exact"},{"name":"Glutathionation","type":"exact"},{"name":"Glutathione","type":"related"},{"name":"L-cysteine glutathione disulfide","type":"exact"},{"name":"L-gamma-glutamyl-L-cysteinyl-glycine (2-1')-disulfide with L-cysteine","type":"exact"},{"name":"MOD_RES S-glutathionyl cysteine","type":"exact"},{"name":"N-(N-gamma-glutamyl-cystinyl)-glycine","type":"exact"},{"name":"SGltCys","type":"exact"},{"name":"cysteinyl glutathione","type":"exact"},{"name":"glutathione disulfide","type":"related"},{"name":"glutathionec","type":"exact"}],"termid":"MOD:00234"}


id: PBO:0005097
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic mRNA Interception","termid":"PBO:0005097"}


id: PR:P49777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tigger transposable element-derived protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03736","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.04c","secondary_identifiers":["UniProtKB:P49777"],"synonyms":[{"name":"Spom972h-TIGD4","type":"exact"}],"termid":"PR:P49777"}


id: PBO:0046312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer lncRNA neighbor of NEAT1 and MALAT1","termid":"PBO:0046312"}


id: PBO:0081953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 4","termid":"PBO:0081953"}


id: SO:0000755
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid that has been generated to act as a vector for foreign sequence.","direct_ancestors":[{"relation_name":"derives_from","term_name":"plasmid","termid":"SO:0000155"},{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmid_vector","secondary_identifiers":["http://en.wikipedia.org/wiki/Plasmid_vector#Vectors"],"synonyms":[{"name":"plasmid vector","type":"exact"}],"termid":"SO:0000755"}


id: GO:1902510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic DNA fragmentation.","definition_xrefs":["PMID:15572351","GOC:hjd","PMID:15723341","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA catabolic process","termid":"GO:1903624"},{"relation_name":"regulates","term_name":"apoptotic DNA fragmentation","termid":"GO:0006309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of apoptotic DNA fragmentation","synonyms":[{"name":"regulation of DNA catabolic process during apoptosis","type":"exact"},{"name":"regulation of DNA catabolism during apoptosis","type":"exact"},{"name":"regulation of DNA fragmentation","type":"broad"},{"name":"regulation of DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"regulation of chromatinolysis","type":"broad"},{"name":"regulation of endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"}],"termid":"GO:1902510"}


id: PBO:0078408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 2-2","termid":"PBO:0078408"}


id: PBO:0087429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit b of the stator stalk of mitochondrial F1F0 ATP synthase; ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; contributes to the oligomerization of the complex, which in turn determines the shape of inner membrane cristae; phosphorylated","termid":"PBO:0087429"}


id: PBO:0045762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA hydratase domain containing 2","termid":"PBO:0045762"}


id: PBO:0067338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 431, pseudogene","termid":"PBO:0067338"}


id: GO:0034883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isonicotinate + 2 H+ + 2 e- = 1,4-dihydroisonicotinate.","definition_xrefs":["UM-BBD_reactionID:r1347"],"gene_count":0,"genotype_count":0,"name":"obsolete isonicotinate reductase activity (obsolete GO:0034883)","synonyms":[{"name":"isonicotinate reductase activity","type":"exact"}],"termid":"GO:0034883"}


id: PBO:0042214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L2","termid":"PBO:0042214"}


id: PBO:0042581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine dioxygenase type 1","termid":"PBO:0042581"}


id: GO:0003704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete specific RNA polymerase II transcription factor activity (obsolete GO:0003704)","synonyms":[{"name":"specific RNA polymerase II transcription factor activity","type":"exact"}],"termid":"GO:0003704"}


id: GO:0090056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving chlorophyll.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"chlorophyll metabolic process","termid":"GO:0015994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"regulation of chlorophyll metabolic process","termid":"GO:0090056"}


id: PR:O94292
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03758","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L38, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.07","secondary_identifiers":["UniProtKB:O94292"],"synonyms":[{"name":"Spom972h-rplN","type":"exact"}],"termid":"PR:O94292"}


id: PBO:0075321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 3","termid":"PBO:0075321"}


id: GO:0016086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Peptide hormones produced by the corpora allata of insects that reversibly inhibit the production of juvenile hormone.","definition_xrefs":["PMID:10891383","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete allatostatin (obsolete GO:0016086)","synonyms":[{"name":"allatostatin","type":"exact"}],"termid":"GO:0016086"}


id: GO:0005171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an hepatocyte growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hepatocyte growth factor receptor binding","synonyms":[{"name":"HGF receptor binding","type":"exact"},{"name":"hepatocyte growth factor","type":"narrow"},{"name":"hepatocyte growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005171"}


id: PBO:0083059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrofolate synthetase, involved in folic acid biosynthesis; catalyzes conversion of dihydropteroate to dihydrofolate in folate coenzyme biosynthesis; FOL3 has a paralog, RMA1, that arose from the whole genome duplication","termid":"PBO:0083059"}


id: GO:0097243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a flavonoid, a compound containing two or more aromatic rings, each bearing at least one aromatic hydroxyl and connected with a carbon bridge.","definition_xrefs":["GOC:sl","PMID:20599706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"flavonoid binding","termid":"GO:0097243"}


id: PBO:0054486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1886","termid":"PBO:0054486"}


id: FYPO:0001644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lithium ions measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular lithium level","synonyms":[{"name":"decreased cellular lithium ion level","type":"exact"},{"name":"decreased cellular lithium level during mitotic cell cycle","type":"related"},{"name":"decreased cellular lithium level during vegetative growth","type":"exact"},{"name":"decreased lithium accumulation","type":"related"},{"name":"reduced cellular lithium level","type":"exact"}],"termid":"FYPO:0001644"}


id: PBO:0067368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 469, pseudogene","termid":"PBO:0067368"}


id: GO:0051804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytolysis in other organism involved in symbiotic interaction (obsolete GO:0051804)","synonyms":[{"name":"activation of cytolysis of cells in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"positive regulation of cytolysis of cells in other organism involved in symbiotic interaction","type":"exact"},{"name":"stimulation of cytolysis of cells in other organism during symbiotic interaction","type":"narrow"},{"name":"up regulation of cytolysis of cells in other organism during symbiotic interaction","type":"exact"},{"name":"up-regulation of cytolysis of cells in other organism during symbiotic interaction","type":"exact"},{"name":"upregulation of cytolysis of cells in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0051804"}


id: GO:0009076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of amino acids of the histidine family.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine family amino acid biosynthetic process (obsolete GO:0009076)","synonyms":[{"name":"histidine family amino acid anabolism","type":"exact"},{"name":"histidine family amino acid biosynthesis","type":"exact"},{"name":"histidine family amino acid biosynthetic process","type":"exact"},{"name":"histidine family amino acid formation","type":"exact"},{"name":"histidine family amino acid synthesis","type":"exact"}],"termid":"GO:0009076"}


id: PBO:0080595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 25","termid":"PBO:0080595"}


id: GO:0015160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-glucans from one side of a membrane to the other. Beta-glucans are compounds composed of glucose residues linked by beta-glucosidic bonds.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"beta-glucan transmembrane transporter activity","termid":"GO:0015160"}


id: FYECO:0000305
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells or samples were exposed to ionizing radiation.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ionizing radiation","synonyms":[{"name":"gamma irradiation","type":"narrow"},{"name":"gamma radiation","type":"narrow"}],"termid":"FYECO:0000305"}


id: GO:0060526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the prostate glandular acini are generated and organized. The glandular acini are the saclike structures of the gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate gland epithelium morphogenesis","termid":"GO:0060740"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate glandular acinus morphogenesis","termid":"GO:0060526"}


id: PBO:0043850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 like","termid":"PBO:0043850"}


id: FYPO:0007567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body that normally occurs in anaphase instead begins in metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:10775265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature protein localization to mitotic spindle pole body","termid":"FYPO:0006824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"premature protein localization to mitotic spindle pole body during metaphase","synonyms":[{"name":"advanced protein localization to mitotic spindle pole body during metaphase","type":"exact"},{"name":"premature protein localisation to mitotic spindle pole body during metaphase","type":"exact"},{"name":"premature protein localization to mitotic spindle pole body during metaphase during vegetative growth","type":"exact"},{"name":"premature protein localization to spindle pole body during metaphase of mitotic cell cycle","type":"exact"},{"name":"premature protein localization to spindle pole body during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007567"}


id: GO:1905937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of germ cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15342467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of germ cell proliferation","termid":"GO:1905936"},{"relation_name":"negatively_regulates","term_name":"germ cell proliferation","termid":"GO:0036093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of germ cell proliferation","synonyms":[{"name":"down regulation of germ cell proliferation","type":"exact"},{"name":"down-regulation of germ cell proliferation","type":"exact"},{"name":"downregulation of germ cell proliferation","type":"exact"},{"name":"inhibition of germ cell proliferation","type":"narrow"}],"termid":"GO:1905937"}


id: GO:1903360
data:
  {"annotated_genes":["SJAG_04947","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96206,100640],"is_not":false,"summary":null,"term":"GO:1903360"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a lateral cortical node.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to lateral cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in lateral cortical node","type":"exact"},{"name":"protein localisation to lateral cortical node","type":"exact"},{"name":"protein localization in lateral cortical node","type":"exact"}],"termid":"GO:1903360","terms_by_termid":{"GO:1903360":null}}


id: PBO:0043960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma E, pseudogene","termid":"PBO:0043960"}


id: PBO:0078725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 1-1","termid":"PBO:0078725"}


id: PBO:0036099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_heat","termid":"PBO:0036099"}


id: FYECO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium azide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NaN3","synonyms":[{"name":"+ respiratory chain inhibitor","type":"related"},{"name":"+ sodium azide","type":"exact"}],"termid":"FYECO:0000380"}


id: PR:O74846
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04224","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component sec6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.10c","secondary_identifiers":["UniProtKB:O74846"],"synonyms":[{"name":"Spom972h-EXOC3","type":"exact"}],"termid":"PR:O74846"}


id: PBO:0061380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 40","termid":"PBO:0061380"}


id: PBO:0042893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, FRL-1, cryptic family 1B","termid":"PBO:0042893"}


id: GO:0000786
data:
  {"annotated_genes":["SJAG_03942","SJAG_00302","SJAG_01873","SJAG_00335","SJAG_03542","SJAG_03047","SJAG_00303","SJAG_03543","SJAG_00307","SJAG_00336","SJAG_03941"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87245,87246,87247,87910,98112,98113,98114,98148,98149,98150,98524,108681,108682,108683,108705,108706,108707,113785,113798],"is_not":false,"summary":null,"term":"GO:0000786"},{"annotations":[98177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043505"},{"annotations":[115490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140573"}]},"cv_name":"cellular_component","definition":"A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00303":null,"SJAG_00307":null,"SJAG_00335":null,"SJAG_00336":null,"SJAG_01873":null,"SJAG_03047":null,"SJAG_03542":null,"SJAG_03543":null,"SJAG_03941":null,"SJAG_03942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"nucleosome","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"secondary_identifiers":["Wikipedia:Nucleosome","GO:0000787","GO:0000788","GO:0005718"],"synonyms":[{"name":"cytoplasmic nucleosome","type":"narrow"},{"name":"nuclear nucleosome","type":"narrow"}],"termid":"GO:0000786","terms_by_termid":{"GO:0000786":null,"GO:0043505":null,"GO:0140573":null}}


id: FYPO:0007043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which alkaline phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"},{"relation_name":"is_a","term_name":"abnormal alkaline phosphatase activity","termid":"FYPO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished alkaline phosphatase activity","synonyms":[{"name":"alkaline phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0007043"}


id: PBO:0031851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_export_from_nucleus","termid":"PBO:0031851"}


id: PBO:0065066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 4","termid":"PBO:0065066"}


id: PR:Q92340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shu1 gene.","definition_xrefs":["UniProtKB:Q92340","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein C1F8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.02c","synonyms":[{"name":"Spom972h-shu1","type":"exact"}],"termid":"PR:Q92340"}


id: PBO:0030739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_nitrogen_starvation","termid":"PBO:0030739"}


id: PBO:0061348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 6","termid":"PBO:0061348"}


id: PBO:0084707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane ADP/ATP translocator; exchanges cytosolic ADP for mitochondrially synthesized ATP; phosphorylated; Aac1p is a minor isoform while Pet9p is the major ADP/ATP translocator; relocalizes from mitochondrion to cytoplasm upon DNA replication stress","termid":"PBO:0084707"}


id: GO:0021718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior olivary nucleus over time, from its formation to the mature structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus development","synonyms":[{"name":"superior olive development","type":"related"}],"termid":"GO:0021718"}


id: PBO:0063267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 13","termid":"PBO:0063267"}


id: PBO:0059325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 10","termid":"PBO:0059325"}


id: PBO:0086165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for sorting proteins to the vacuole; Mvp1p and Vps1p act in concert to promote membrane traffic to the vacuole; participates in transcription initiation and/or early elongation of specific genes; interacts with 'foot domain' of RNA polymerase II; deletion results in abnormal CTD-Ser5 phosphorylation of RNA polymerase II at specific promoter regions; protein abundance increases in response to DNA replication stress","termid":"PBO:0086165"}


id: GO:0033701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-D-galactose + 2 NADP+ + H2O = dTDP-D-galacturonate + 2 NADPH + 2 H+.","definition_xrefs":["EC:1.1.1.186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dTDP-galactose 6-dehydrogenase activity","secondary_identifiers":["MetaCyc:DTDP-GALACTOSE-6-DEHYDROGENASE-RXN","RHEA:12396"],"synonyms":[{"name":"dTDP-D-galactose:NADP+ 6-oxidoreductase activity","type":"related"},{"name":"dTDPgalactose 6-dehydrogenase activity","type":"related"},{"name":"thymidine-diphosphate-galactose dehydrogenase activity","type":"related"}],"termid":"GO:0033701"}


id: PBO:0077395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 132C","termid":"PBO:0077395"}


id: PBO:0084896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation initiation factor 2","termid":"PBO:0084896"}


id: PBO:0029974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_cycle_arrest","termid":"PBO:0029974"}


id: PBO:0001793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin family C2 domain protein, Syn1","termid":"PBO:0001793"}


id: PR:O74898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphthine methyl ester synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10882:SF0","PRO:DNx","OMA:SCHPO04943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine methyl ester synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.14","secondary_identifiers":["UniProtKB:O74898"],"synonyms":[{"name":"Spom972h-DPH5","type":"exact"},{"name":"diphthamide biosynthesis methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74898"}


id: PBO:0083934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin involved in regulation of the cell cycle; activates Cdc28p kinase to promote the G1 to S phase transition; late G1 specific expression depends on transcription factor complexes, MBF (Swi6p-Mbp1p) and SBF (Swi6p-Swi4p); CLN2 has a paralog, CLN1, that arose from the whole genome duplication; cell cycle arrest phenotype of the cln1 cln2 cln3 triple null mutant is complemented by any of human cyclins CCNA2, CCNB1, CCNC, CCND1, or CCNE1","termid":"PBO:0083934"}


id: PBO:0087879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator involved in the repression of GAL genes; involved in the repression of GAL genes in the absence of galactose; inhibits transcriptional activation by Gal4p; inhibition relieved by Gal3p or Gal1p binding","termid":"PBO:0087879"}


id: GO:0042074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression).","definition_xrefs":["GOC:jl","PMID:16099638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in gastrulation","termid":"GO:0042074"}


id: PBO:0070900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 8","termid":"PBO:0070900"}


id: GO:0048909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line nerve over time, form its formation to the mature structure. The anterior lateral line nerve contains efferent axons that innervate hair cells of the ALL and afferent axons that project to an octavolateralis column in the hindbrain. The octavolateralis column consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:jid","GOC:dgh","ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve development","termid":"GO:0048892"},{"relation_name":"part_of","term_name":"anterior lateral line system development","termid":"GO:0048898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line nerve development","secondary_identifiers":["GO:0021734"],"synonyms":[{"name":"ALLN development","type":"exact"},{"name":"nALL development","type":"exact"},{"name":"rostral lateral line nerve development","type":"exact"}],"termid":"GO:0048909"}


id: PBO:0085650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in microtubule morphogenesis; required for protection from excess free beta-tubulin; proposed to be involved the folding of beta-tubulin; similar to mouse beta-tubulin cofactor A; protein abundance increases in response to DNA replication stress","termid":"PBO:0085650"}


id: FYPO:0006285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the telomere of a chromosome is longer than normal during anaphase B of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to telomere","termid":"FYPO:0005649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of protein localization to telomere during mitotic anaphase B","synonyms":[{"name":"increased duration of protein localisation to telomere during mitotic anaphase B","type":"exact"},{"name":"increased duration of protein localization to chromosome, telomeric region during mitotic anaphase B","type":"exact"},{"name":"increased duration of protein localization to telomere during anaphase B during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to telomere during anaphase B of mitotic cell cycle","type":"exact"},{"name":"increased duration of protein localization to telomeric region during mitotic anaphase B","type":"exact"},{"name":"prolonged protein localization to telomere during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0006285"}


id: PBO:0053313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA, regulator of reprogramming","termid":"PBO:0053313"}


id: GO:0061189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of sclerotome development","termid":"GO:0061190"},{"relation_name":"positively_regulates","term_name":"sclerotome development","termid":"GO:0061056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sclerotome development","termid":"GO:0061189"}


id: PR:G2TRR8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.10 gene.","definition_xrefs":["UniProtKB:G2TRR8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.10","synonyms":[{"name":"Spom972h-SPBPB21E7.10","type":"exact"}],"termid":"PR:G2TRR8"}


id: PBO:0044889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 1B","termid":"PBO:0044889"}


id: GO:0007586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:isa_complete","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestion","secondary_identifiers":["Wikipedia:Digestion"],"termid":"GO:0007586"}


id: PR:Q9C0X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC12C2.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12C2.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.14c","synonyms":[{"name":"Spom972h-SPBC12C2.14c","type":"exact"}],"termid":"PR:Q9C0X4"}


id: PBO:0081813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 6, Y-linked","termid":"PBO:0081813"}


id: FYPO:0002106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, but the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"},{"relation_name":"is_a","term_name":"viable vegetative cell with increased cell diameter","termid":"FYPO:0006616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"viable stubby vegetative cell","synonyms":[{"name":"stubby viable cell during vegetative growth","type":"exact"},{"name":"stubby viable vegetative cell","type":"exact"},{"name":"viable stubby vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable watermelon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0002106"}


id: GO:0044038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a macromolecule destined to form part of a cell wall.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"cell wall biogenesis","termid":"GO:0042546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cell wall macromolecule biosynthetic process","synonyms":[{"name":"cell wall macromolecule anabolism","type":"exact"},{"name":"cell wall macromolecule biosynthesis","type":"exact"},{"name":"cell wall macromolecule biosynthetic process at cellular level","type":"exact"},{"name":"cell wall macromolecule synthesis","type":"exact"},{"name":"cellular cell wall macromolecule biosynthetic process","type":"exact"}],"termid":"GO:0044038"}


id: PBO:0050140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 50","termid":"PBO:0050140"}


id: PBO:0047644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase family member 1C","termid":"PBO:0047644"}


id: PBO:0035867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_protein_transport_during_vegetative_growth","termid":"PBO:0035867"}


id: PBO:0065400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 3 pseudogene 1","termid":"PBO:0065400"}


id: PBO:0085002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of actin nucleation-promoting factor activity; interacts with Las17p, a homolog of human Wiskott-Aldrich Syndrome protein (WASP), via an N-terminal SH3 domain, and along with PIN3 cooperatively inhibits the nucleation of actin filaments; overexpression blocks receptor-mediated endocytosis; protein increases in abundance and forms nuclear foci in response to DNA replication stress; LSB1 has a paralog, PIN3, that arose from the whole genome duplication","termid":"PBO:0085002"}


id: MOD:01856
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by rearrangement and condensation of a cysteine with the carbonyl of the preceding residue to form a 1,3-oxazole-4-carbothionic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues","termid":"MOD:01419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxazole/oxazoline ring crosslinked residues (Cys)","termid":"MOD:01856"}


id: POMBASE_GENE_EX_REL:directly_localizes
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"_global:has_input"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_localizes","termid":"POMBASE_GENE_EX_REL:directly_localizes"}


id: GO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the adherens junction.","definition_xrefs":["GOC:mah","GOC:bc","PMID:26412237","GOC:BHF","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to adherens junction","secondary_identifiers":["GO:1904696"],"synonyms":[{"name":"protein localisation in adherens junction","type":"exact"},{"name":"protein localisation in cell-cell adherens junction","type":"exact"},{"name":"protein localisation to adherens junction","type":"exact"},{"name":"protein localisation to cell-cell adherens junction","type":"exact"},{"name":"protein localization in adherens junction","type":"exact"},{"name":"protein localization in cell-cell adherens junction","type":"exact"},{"name":"protein localization to cell-cell adherens junction","type":"exact"}],"termid":"GO:0071896"}


id: GO:0071732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitric oxide stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitric oxide","termid":"GO:0071731"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"cellular response to reactive nitrogen species","termid":"GO:1902170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitric oxide","termid":"GO:0071732"}


id: PBO:0060805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S8","termid":"PBO:0060805"}


id: GO:0050613
data:
  {"annotated_genes":["SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100569],"is_not":false,"summary":null,"term":"GO:0050613"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 4,4-dimethyl-5-alpha-cholesta-8,24-dien-3-beta-ol = NADPH + H+ + 4,4-dimethyl-5-alpha-cholesta-8,14,24-trien-3-beta-ol.","definition_xrefs":["EC:1.3.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"delta14-sterol reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000251","Reactome:R-HSA-194674","RHEA:18561","MetaCyc:RXN66-14","Reactome:R-HSA-194698"],"synonyms":[{"name":"4,4-dimethyl-5alpha-cholesta-8,24-dien-3beta-ol:NADP+ delta14-oxidoreductase activity","type":"related"},{"name":"C-14 sterol reductase activity","type":"exact"},{"name":"D14-sterol reductase activity","type":"exact"},{"name":"sterol C-14 reductase activity","type":"exact"},{"name":"sterol C14-reductase activity","type":"related"}],"termid":"GO:0050613","terms_by_termid":{"GO:0050613":null}}


id: GO:0046950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone, as carried out by individual cells. Although 3-hydroxybutyrate is not a ketone, it is classed as a ketone body because it exists in an equilibrium with acetoacetate. Ketone bodies may accumulate in excessive amounts in the body in starvation, diabetes mellitus or in other defects of carbohydrate metabolism.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cellular ketone body metabolic process","synonyms":[{"name":"cellular ketone body metabolism","type":"exact"}],"termid":"GO:0046950"}


id: GO:0031647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that affects the structure and integrity of a protein, altering the likelihood of its degradation or aggregation.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein stability","termid":"GO:0031647"}


id: PBO:0070853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 6","termid":"PBO:0070853"}


id: PATO:0005021
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Cuspidate quality inhering in a bearer by virtue of the bearer's possessing a single cusp.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuspidate","termid":"PATO:0001973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unicuspidate","termid":"PATO:0005021"}


id: PBO:0056136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and CTNNBIP1 domain containing","termid":"PBO:0056136"}


id: PBO:0086218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that contains a PX domain and binds phosphoinositides; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; PX stands for Phox homology","termid":"PBO:0086218"}


id: PBO:0053919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1216","termid":"PBO:0053919"}


id: PBO:0090980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein She9","termid":"PBO:0090980"}


id: FYPO:0009085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of lithium chloride and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to lithium chloride and sodium dodecyl sulfate","synonyms":[{"name":"resistance to lithium chloride and SDS","type":"exact"},{"name":"resistance to lithium chloride and SDS during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and SDS in combination","type":"exact"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to lithium chloride and SDS","type":"exact"},{"name":"resistant to lithium chloride and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009085"}


id: PBO:0032725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase_with_abnormal_spindle","termid":"PBO:0032725"}


id: PATO:0001333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which ends later than the natural end time.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"offset quality","termid":"PATO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporally extended","termid":"PATO:0001333"}


id: GO:0035526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from the plasma membrane back to the trans-Golgi network, mediated by vesicles.","definition_xrefs":["PMID:17488291","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"retrograde transport, plasma membrane to Golgi","termid":"GO:0035526"}


id: GO:0035185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first nine mitotic division cycles of the insect embryo, during which the dividing nuclei lie deep in the interior of the egg and divide nearly synchronously. This is the first phase of the syncytial period where nuclei divide in a common cytoplasm without cytokinesis.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle comprising mitosis without cytokinesis","termid":"GO:0033301"},{"relation_name":"is_a","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}


id: PBO:0046418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A3","termid":"PBO:0046418"}


id: PBO:0002004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability protein Rmi1 (predicted)","termid":"PBO:0002004"}


id: PBO:0040743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 9","termid":"PBO:0040743"}


id: PBO:0070478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 13","termid":"PBO:0070478"}


id: SO:0000661
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000661 intron_attribute (obsolete SO:0000661)","termid":"SO:0000661"}


id: PBO:0013812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP dehydrogenase Gua1","termid":"PBO:0013812"}


id: GO:0035260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the internal genitalia are generated and organized. The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals.","definition_xrefs":["PMID:24793987","PMID:25247640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal genitalia morphogenesis","termid":"GO:0035260"}


id: PBO:0030604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-coflocculating_cells","termid":"PBO:0030604"}


id: PATO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's being placed alternately one above the other.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternate placement","termid":"PATO:0001932"}


id: PR:P78890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H3.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.15c","synonyms":[{"name":"Spom972h-SPAC23H3.15c","type":"exact"}],"termid":"PR:P78890"}


id: PBO:0063641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pepsinogen A4","termid":"PBO:0063641"}


id: PBO:0002169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLDc domain protein 1","termid":"PBO:0002169"}


id: PBO:0058351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4724","termid":"PBO:0058351"}


id: MOD:00377
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-histidine residue and 5'-phosphouridine through a phosphoramide ester bond to form 1'-(phospho-5'-uridine)-L-histidine.","definition_xrefs":["RESID:AA0372","PubMed:8794735","Unimod:417#H","PubMed:11467524","PubMed:321007","PubMed:380639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"uridylated residue","termid":"MOD:01166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(phospho-5'-uridine)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-[1-(5'-uridine phosphono)imidazol-4-yl]propanoic acid","type":"exact"},{"name":"1'-(phospho-5'-uridine)-L-histidine","type":"exact"},{"name":"ACT_SITE Tele-UMP-histidine intermediate","type":"exact"},{"name":"L-histidine 5'-uridine phosphoramidester","type":"exact"},{"name":"L-histidine monoanhydride with 5'-uridylic acid","type":"exact"},{"name":"MOD_RES O-UMP-histidine","type":"exact"},{"name":"N(tau)-5'-uridylic-L-histidine","type":"exact"},{"name":"N1'-uridylylated histidine","type":"exact"},{"name":"PhosphoUridine","type":"related"},{"name":"tele-5'-uridylic-L-histidine","type":"exact"},{"name":"uridine phosphodiester","type":"related"}],"termid":"MOD:00377"}


id: PBO:0001814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Pdr1","termid":"PBO:0001814"}


id: PBO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouse Glia Maturation Factor homolog","termid":"PBO:0001293"}


id: PBO:0052149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel interacting protein 4","termid":"PBO:0052149"}


id: PBO:0059732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 6","termid":"PBO:0059732"}


id: FYPO:0003824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of caffeine and rapamycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to caffeine and rapamycin","synonyms":[{"name":"resistance to caffeine and rapamycin during mitotic cell cycle","type":"related"},{"name":"resistance to caffeine and rapamycin during vegetative growth","type":"exact"},{"name":"resistance to caffeine and rapamycin in combination","type":"exact"},{"name":"resistant to caffeine and rapamycin","type":"exact"}],"termid":"FYPO:0003824"}


id: PBO:0049083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 137C","termid":"PBO:0049083"}


id: GO:0034031
data:
  {"annotated_genes":["SJAG_02247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleoside bisphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate catabolic process","termid":"GO:0033869"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate metabolic process","termid":"GO:0033875"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside bisphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside bisphosphate breakdown","type":"exact"},{"name":"ribonucleoside bisphosphate catabolism","type":"exact"},{"name":"ribonucleoside bisphosphate degradation","type":"exact"}],"termid":"GO:0034031","terms_by_termid":{"GO:0015938":null}}


id: GO:0034138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 3.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 3 signaling pathway","synonyms":[{"name":"TLR3 signaling pathway","type":"exact"},{"name":"toll-like receptor 3 signalling pathway","type":"exact"}],"termid":"GO:0034138"}


id: PBO:0030754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate_dehydrogenase_(NADP+)_activity","termid":"PBO:0030754"}


id: GO:0060017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parathyroid gland development","termid":"GO:0060017"}


id: FYPO:0000405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G2/M transition of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cell cycle phase transition","termid":"FYPO:0006916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic G2/M phase transition","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: normal","type":"related"},{"name":"normal G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"normal cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"normal mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000405"}


id: GO:0140480
data:
  {"annotated_genes":["SJAG_03200","SJAG_01422","SJAG_01460","SJAG_02332","SJAG_04558","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86283,96715,98939,99579,107539,108952],"is_not":false,"summary":null,"term":"GO:0140480"}]},"cv_name":"biological_process","definition":"A process in which the duplicated mitotic spindle pole body is inserted into a fenestra which opens in the nuclear envelope in early mitosis, and is subsequently tethered to the membrane.","definition_xrefs":["PMID:19487457","PMID:24529240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle pole body localization","termid":"GO:1990608"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic spindle pole body insertion into the nuclear envelope","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of spindle pole body localisation in nuclear envelope","type":"exact"},{"name":"establishment of spindle pole body localization in nuclear envelope","type":"exact"},{"name":"establishment of spindle pole body localization to nuclear envelope","type":"exact"}],"termid":"GO:0140480","terms_by_termid":{"GO:0140480":null}}


id: PBO:0048281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 16","termid":"PBO:0048281"}


id: GO:0061411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to cold (obsolete GO:0061411)","termid":"GO:0061411"}


id: GO:0048527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral root over time, from its formation to the mature structure. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic root development","termid":"GO:0048528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root development","termid":"GO:0048527"}


id: GO:0043963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts an adenylate cyclase-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of host adenylate cyclase-mediated signal transduction (obsolete GO:0043963)","termid":"GO:0043963"}


id: GO:0047266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: poly(ribitol phosphate) + UDP-D-glucose = beta-D-glucosylpoly(ribitol phosphate) + UDP.","definition_xrefs":["MetaCyc:2.4.1.53-RXN","EC:2.4.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"poly(ribitol-phosphate) beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-18017","RHEA:10068"],"synonyms":[{"name":"UDP glucose-poly(ribitol-phosphate) beta-glucosyltransferase activity","type":"related"},{"name":"UDP-D-glucose polyribitol phosphate glucosyl transferase activity","type":"related"},{"name":"UDP-D-glucose:polyribitol phosphate glucosyl transferase activity","type":"related"},{"name":"UDP-glucose:poly(ribitol-phosphate) beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:poly(ribitol-phosphate) beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-poly(ribitol-phosphate) beta-glucosyltransferase activity","type":"related"}],"termid":"GO:0047266"}


id: SO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The paternal copy of the gene is modified, rendering it transcriptionally silent.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_imprinted","termid":"SO:0000134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally_imprinted","synonyms":[{"name":"paternally imprinted","type":"exact"}],"termid":"SO:0000136"}


id: GO:0140295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a pathogen-derived entity that interacts with a host receptor to activate effector-triggered immunity.","definition_xrefs":["PMID:20601497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0140677","GO:0005515","GO:0003674","GO:0005488","GO:0098772"],"is_obsolete":false,"name":"pathogen-derived receptor ligand activity","synonyms":[{"name":"host-selective toxin","type":"related"},{"name":"innate receptor ligand activity","type":"related"},{"name":"necrotrophic effector","type":"related"}],"termid":"GO:0140295"}


id: FYECO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which nocodazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ nocodazole","termid":"FYECO:0000222"}


id: PBO:0079821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UL16 binding protein 3","termid":"PBO:0079821"}


id: PBO:0017593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoprotein 3 family Vps74 (predicted)","termid":"PBO:0017593"}


id: PBO:0110379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL9R pseudogene 5","termid":"PBO:0110379"}


id: PBO:0071962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS6KA2 antisense RNA 1","termid":"PBO:0071962"}


id: PBO:0061969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AH member 1 pseudogene","termid":"PBO:0061969"}


id: PBO:0027071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_at_telomeres","termid":"PBO:0027071"}


id: GO:0023058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of a signal transduction pathway in response to a stimulus upon prolonged exposure to that stimulus.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adaptation of signaling pathway","synonyms":[{"name":"adaptation of signalling pathway","type":"exact"}],"termid":"GO:0023058"}


id: GO:0044166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the host cell endoplasmic reticulum.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum lumen","synonyms":[{"name":"host endoplasmic reticulum lumen","type":"exact"}],"termid":"GO:0044166"}


id: GO:0004322
data:
  {"annotated_genes":["SJAG_03862","SJAG_04677"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88577,109995],"is_not":false,"summary":null,"term":"GO:0004322"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O.","definition_xrefs":["RHEA:11148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, oxygen as acceptor","termid":"GO:0016724"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03862":null,"SJAG_04677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ferroxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-917891","EC:1.16.3.1","Reactome:R-HSA-1562603","Reactome:R-HSA-5621402","Reactome:R-HSA-5691107","Reactome:R-HSA-1562626","MetaCyc:RXN0-1483","Reactome:R-HSA-1562604","Reactome:R-HSA-917933"],"synonyms":[{"name":"Fe(II):oxygen oxidoreductase activity","type":"related"},{"name":"HEPH","type":"narrow"},{"name":"caeruloplasmin","type":"narrow"},{"name":"ceruloplasmin","type":"narrow"},{"name":"ferro:O2 oxidoreductase activity","type":"related"},{"name":"ferroxidase I","type":"related"},{"name":"ferroxidase, iron II:oxygen oxidoreductase activity","type":"related"},{"name":"hephaestin","type":"narrow"},{"name":"iron(II): oxygen oxidoreductase activity","type":"related"},{"name":"multicopper ferroxidase iron transport mediator activity","type":"narrow"}],"termid":"GO:0004322","terms_by_termid":{"GO:0004322":null}}


id: PBO:0052132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 4","termid":"PBO:0052132"}


id: MOD:00089
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-palmitoyl-L-serine.","definition_xrefs":["PubMed:3467339","Unimod:47#S","RESID:AA0080","OMSSA:94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoylated residue","termid":"MOD:00652"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-palmitoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(hexadecanoyloxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-palmitoyl serine intermediate","type":"exact"},{"name":"L-serine hexadecanoate ester","type":"exact"},{"name":"LIPID O-palmitoyl serine","type":"exact"},{"name":"O-hexadecanoylated L-serine","type":"exact"},{"name":"O-palmitoyl-L-serine","type":"exact"},{"name":"O-palmitoylated L-serine","type":"exact"},{"name":"O3-palmitoyl-serine","type":"exact"},{"name":"OPamSer","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"palmitoylations","type":"exact"},{"name":"serine palmitate ester","type":"exact"}],"termid":"MOD:00089"}


id: PBO:0038327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-under-expressed_in","termid":"PBO:0038327"}


id: PATO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in a population of multiple sexes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"population quality","termid":"PATO:0002003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed sex","termid":"PATO:0001338"}


id: PR:O94600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TELO2-interacting protein 1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEL2-interacting protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.13c","secondary_identifiers":["UniProtKB:O94600"],"synonyms":[{"name":"Spom972h-TTI1","type":"exact"}],"termid":"PR:O94600"}


id: PBO:0049408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 1 soluble subunit alpha 1","termid":"PBO:0049408"}


id: PBO:0054352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1745","termid":"PBO:0054352"}


id: PBO:0077338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 74B","termid":"PBO:0077338"}


id: PR:O42883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.06","synonyms":[{"name":"Spom972h-SPAC8E11.06","type":"exact"}],"termid":"PR:O42883"}


id: GO:1900556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emericellamide.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"},{"relation_name":"is_a","term_name":"depsipeptide catabolic process","termid":"GO:0050762"},{"relation_name":"is_a","term_name":"lactam catabolic process","termid":"GO:0072340"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"emericellamide metabolic process","termid":"GO:1900555"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"emericellamide catabolic process","synonyms":[{"name":"emericellamide breakdown","type":"exact"},{"name":"emericellamide catabolism","type":"exact"},{"name":"emericellamide degradation","type":"exact"}],"termid":"GO:1900556"}


id: PATO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000897 germ line dependent fertility value (obsolete PATO:0000897)","termid":"PATO:0000897"}


id: MOD:02006
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with a stearoylsulfanyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"stearoylated residue","termid":"MOD:02001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-stearoylated residue","termid":"MOD:02006"}


id: GO:0032174
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tubular structure with flared ends, shaped like an hourglass and composed of highly ordered arrays of septin filaments, that forms at the bud neck of a dividing cell. In S. cerevisiae, this structure is located at the bud neck throughout most of the cell cycle and the septins are fixed within the structure, not exchanging with soluble septins. This septin structure acts as a scaffold for other proteins that function at the bud neck.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud neck septin structure","termid":"GO:0000399"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"},{"relation_name":"is_a","term_name":"septin collar","termid":"GO:0032173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"cellular bud neck septin collar","termid":"GO:0032174"}


id: PBO:0027136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-circularized_chromosome_during_mitotic_G2_phase","termid":"PBO:0027136"}


id: GO:0052495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within its second organism's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by organism of vascular system in other organism involved in symbiotic interaction (obsolete GO:0052495)","synonyms":[{"name":"occlusion by organism of vascular system in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052495"}


id: GO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of palymitoyl groups from a lipoprotein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"},{"relation_name":"is_a","term_name":"lipoprotein catabolic process","termid":"GO:0042159"},{"relation_name":"is_a","term_name":"macromolecule depalmitoylation","termid":"GO:0098734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"protein depalmitoylation","termid":"GO:0002084"}


id: PBO:0044153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDNEP1 pseudogene 2","termid":"PBO:0044153"}


id: GO:0006301
data:
  {"annotated_genes":["SJAG_03898","SJAG_02521","SJAG_04816","SJAG_01044","SJAG_04089","SJAG_04791","SJAG_04190","SJAG_16460","SJAG_00573","SJAG_00611","SJAG_02918","SJAG_02667","SJAG_00819","SJAG_00208","SJAG_03906","SJAG_00406","SJAG_01221","SJAG_00153"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84184,84805,92147,94380,100347,100535,101056,112888,113198],"is_not":false,"summary":null,"term":"GO:0006301"},{"annotations":[113411,98996,100102,95426,100342,99016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070987"},{"annotations":[95427,98997,99017,109678,100103,92007,113412,100343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042276"},{"annotations":[107869],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904332"},{"annotations":[94442,113413,100107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019985"}]},"cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication. Includes pathways that remove replication-blocking lesions in conjunction with DNA replication.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00208":null,"SJAG_00406":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_00819":null,"SJAG_01044":null,"SJAG_01221":null,"SJAG_02521":null,"SJAG_02667":null,"SJAG_02918":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"postreplication repair","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Postreplication_repair"],"synonyms":[{"name":"postreplication DNA repair","type":"exact"}],"termid":"GO:0006301","terms_by_termid":{"GO:0006301":null,"GO:0019985":null,"GO:0042276":null,"GO:0070987":null,"GO:1904332":null}}


id: GO:0048479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the style over time, from its formation to the mature structure. The style is an elongated part of a carpel, or group of fused carpels, and it lies between the ovary and the stigma.","definition_xrefs":["PO:0009074","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"carpel development","termid":"GO:0048440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"style development","termid":"GO:0048479"}


id: PBO:0079977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 15","termid":"PBO:0079977"}


id: PBO:0029270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_binding","termid":"PBO:0029270"}


id: GO:0001601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gut peptide YY to initiate a change in cell activity.","definition_xrefs":["PMID:9315606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor activity","termid":"GO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"peptide YY receptor activity","termid":"GO:0001601"}


id: GO:0022037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metencephalon over time, from its formation to the mature structure.","definition_xrefs":["GOC:curators","GOC:dgh","GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metencephalon development","termid":"GO:0022037"}


id: GO:0048467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gynoecium over time, from its formation to the mature structure. The gynoecium is the collective name for the carpels of a flower.","definition_xrefs":["GOC:go_curators","PO:0008062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gynoecium development","synonyms":[{"name":"pistil development","type":"exact"}],"termid":"GO:0048467"}


id: PR:Q9UT72
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rfp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase complex slx8-rfp subunit rfp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.18","synonyms":[{"name":"RING finger protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rfp2","type":"exact"}],"termid":"PR:Q9UT72"}


id: GO:0007089
data:
  {"annotated_genes":["SJAG_02404","SJAG_01825","SJAG_03681","SJAG_01401","SJAG_03591","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87871,97742,102071,105004,111438,112008],"is_not":false,"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"A cell cycle process by which a cell commits to entering S phase via a positive feedback mechanism between the regulation of transcription and G1 CDK activity.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G1/S transition of mitotic cell cycle","termid":"GO:1900087"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01210":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02404":null,"SJAG_03591":null,"SJAG_03681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044772","GO:0007049"],"is_obsolete":false,"name":"traversing start control point of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000081"],"termid":"GO:0007089","terms_by_termid":{"GO:0007089":null}}


id: PBO:0030837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_guanine_import","termid":"PBO:0030837"}


id: MOD:00757
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to O4-galactosyl-L-hydroxyproline.","definition_xrefs":["RESID:AA0389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4-galactosyl-L-hydroxyproline","synonyms":[{"name":"(2S,4R)-4-(beta-D-galactopyranosyloxy)pyrrolidine-2-carboxylic acid","type":"exact"},{"name":"4-(beta-D-galactopyranosyloxy)proline","type":"exact"},{"name":"4-(galactosyloxy)proline","type":"exact"},{"name":"CARBOHYD O-linked (Gal) hydroxyproline","type":"exact"},{"name":"O4-galactosyl-L-hydroxyproline","type":"exact"},{"name":"O4-glycosyl-hydroxyproline","type":"exact"},{"name":"beta-galactopyranosyl-4-hydroxyproline","type":"exact"}],"termid":"MOD:00757"}


id: PBO:0003385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol kinase Tor2","termid":"PBO:0003385"}


id: PR:O13914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alanine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11777:SF6","OMA:SCHPO00887","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine--tRNA ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.09","secondary_identifiers":["UniProtKB:O13914"],"synonyms":[{"name":"AlaRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AARS","type":"exact"},{"name":"alanyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13914"}


id: PBO:0030217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_nutrient","termid":"PBO:0030217"}


id: PBO:0090916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone","termid":"PBO:0090916"}


id: GO:0010314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-5-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 5' position.","definition_xrefs":["GOC:bf","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol-5-phosphate binding","termid":"GO:0010314"}


id: FYPO:0006635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to cell tip during mitotic interphase","synonyms":[{"name":"normal protein localisation to cell tip during mitotic interphase","type":"exact"},{"name":"normal protein localization to cell end during mitotic interphase","type":"exact"},{"name":"normal protein localization to cell tip during interphase during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell tip during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006635"}


id: GO:0033237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an 11-beta-hydroxysteroid + NADP+ = an 11-oxosteroid + NADPH + H+.","definition_xrefs":["EC:1.1.1.146"],"gene_count":0,"genotype_count":0,"name":"obsolete 11-beta-hydroxysteroid dehydrogenase (NADP+) activity (obsolete GO:0033237)","synonyms":[{"name":"11-beta-hydroxysteroid dehydrogenase (NADP+) activity","type":"exact"},{"name":"11beta-hydroxysteroid:NADP+ 11-oxidoreductase","type":"related"},{"name":"beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"corticosteroid 11-beta-dehydrogenase activity","type":"related"}],"termid":"GO:0033237"}


id: PBO:0042700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 2","termid":"PBO:0042700"}


id: GO:0098848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-ribose 1-methylphosphonate 5-phosphate = alpha-D-ribose 1,2-cyclic phosphate 5-phosphate + methane.","definition_xrefs":["GOC:dos","GOC:ik","EC:4.7.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon phosphorus lyase activity","termid":"GO:0018835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase activity","secondary_identifiers":["RHEA:34707"],"synonyms":[{"name":"alpha-D-ribose-1-methylphosphonate-5-phosphate C-P-lyase (methane forming)","type":"related"}],"termid":"GO:0098848"}


id: PR:O13351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein pmt3/smt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.06","synonyms":[{"name":"Spom972h-pmt3","type":"exact"}],"termid":"PR:O13351"}


id: GO:0007127
data:
  {"annotated_genes":["SJAG_04126","SJAG_02104","SJAG_00908","SJAG_05295","SJAG_03438","SJAG_01224","SJAG_02346","SJAG_01076","SJAG_01677","SJAG_00368","SJAG_00266","SJAG_00794","SJAG_02606","SJAG_01278","SJAG_04259","SJAG_01601","SJAG_04303","SJAG_00600","SJAG_03673","SJAG_02490","SJAG_02294","SJAG_01370","SJAG_03221","SJAG_04457","SJAG_00757","SJAG_05319","SJAG_03685","SJAG_05220","SJAG_03680","SJAG_02561","SJAG_05019","SJAG_03048","SJAG_03327","SJAG_03525","SJAG_00229","SJAG_00980","SJAG_05373","SJAG_00113","SJAG_03926","SJAG_04143","SJAG_02822","SJAG_05333","SJAG_04271","SJAG_01263","SJAG_01775","SJAG_03751","SJAG_02460","SJAG_01044","SJAG_03698","SJAG_03989","SJAG_01419","SJAG_00727","SJAG_01708","SJAG_05260","SJAG_03437","SJAG_02339","SJAG_00623","SJAG_02814","SJAG_05323","SJAG_01538","SJAG_00172","SJAG_03219","SJAG_01873","SJAG_00935","SJAG_03683","SJAG_03092","SJAG_02708","SJAG_00418","SJAG_02652","SJAG_01837","SJAG_02465","SJAG_04950","SJAG_00918","SJAG_05185","SJAG_02267","SJAG_03942","SJAG_01371","SJAG_00756","SJAG_02731","SJAG_00140","SJAG_01330","SJAG_04076","SJAG_05266","SJAG_01662","SJAG_02181","SJAG_02045","SJAG_07002","SJAG_04623","SJAG_01082","SJAG_03287","SJAG_02737","SJAG_00100","SJAG_01805","SJAG_03217","SJAG_01156","SJAG_01863","SJAG_01211","SJAG_05196","SJAG_03073","SJAG_01410","SJAG_04748","SJAG_03567","SJAG_03681","SJAG_02311","SJAG_03720","SJAG_01138","SJAG_02556","SJAG_02286","SJAG_04001","SJAG_01777","SJAG_05226","SJAG_03220","SJAG_00397","SJAG_02616"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91337,97912,103831,113333],"is_not":false,"summary":null,"term":"GO:0007127"},{"annotations":[112901,103773,84714,85320,95181],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[93709,96844,97544,107508,99082,83932,107159,99378,110061,87135,87516,113042,91336,107329,87966],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030989"},{"annotations":[89921,103930,97446,94747,86438,111634,83989,109896,113155],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[106663,88996,107330,103931,83933],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007129"},{"annotations":[85517,109341,113791,90006,89922,87916,110601,106294],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045143"},{"annotations":[102696,97545,107331],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[113156,85748],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"},{"annotations":[102416,110602],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[102050,85920],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[101200,83576,98938,85921,96032],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[97389,95248,97913,100606,89925,103932,109342,110603,109897,112005],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[107231,105763,86489,104856,100972],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010780"},{"annotations":[106412,103775],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[96662,113195,103776,88997,93052,97636,106413,84654],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[106295,90007],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"},{"annotations":[96663,88998,84655],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[113642,112048,113779,83577,92849,102051],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045141"},{"annotations":[102052,110099],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044821"},{"annotations":[109900],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[98499,104465],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[96665,113199,88793,96698,87602,85751,89362,93053,100945,100973,86950,104081,107232,84721,99988,103779,96762,100443,86441,114834,97638,85224,86490,88870,102830,85449,111635,90877],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007131"},{"annotations":[97449],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[112789],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[97640,106436,102295,113201,113388,104259,114835,105197,113536],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[112345],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062209"},{"annotations":[89938,94755,101579,112030,91695,85905,94040,91441,98560,85302,106426,113018,103613,105257,1039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first meiotic nuclear division in which homologous chromosomes are paired and segregated from each other, producing two haploid daughter nuclei.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:jl","PMID:9334324","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"},{"relation_name":"is_a","term_name":"meiotic nuclear 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I","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Meiosis#Meiosis_I"],"synonyms":[{"name":"meiosis I nuclear division","type":"exact"}],"termid":"GO:0007127","terms_by_termid":{"GO:0000709":null,"GO:0000712":null,"GO:0007127":null,"GO:0007129":null,"GO:0007131":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0030989":null,"GO:0030999":null,"GO:0031619":null,"GO:0032118":null,"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0045143":null,"GO:0051455":null,"GO:0051755":null,"GO:0062209":null,"GO:0070197":null,"GO:1904967":null,"GO:1905263":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990813":null,"GO:1990918":null}}


id: GO:0160046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(out) + oxalate(in) = chloride(in) + oxalate(out).","definition_xrefs":["PMID:17442754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"},{"relation_name":"is_a","term_name":"oxalate transmembrane transporter activity","termid":"GO:0019531"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"oxalate:chloride antiporter activity","termid":"GO:0160046"}


id: PBO:0077302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 41B","termid":"PBO:0077302"}


id: PATO:0002422
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pertaining to the individual parts making up an aggregate fruit like a many-lobed \\\"berry,\\\" such as a raspberry.","definition_xrefs":["wikipedia:https://en.wikipedia.org/wiki/Acinus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acinar","termid":"PATO:0002422"}


id: PBO:0054233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1615","termid":"PBO:0054233"}


id: PBO:0000103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRCB domain protein","termid":"PBO:0000103"}


id: PR:Q10323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphoceramide mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.11c","synonyms":[{"name":"IPC mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-imt3","type":"exact"}],"termid":"PR:Q10323"}


id: PBO:0040608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAH domain and coiled-coil containing 1","termid":"PBO:0040608"}


id: PBO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup132","termid":"PBO:0001723"}


id: PBO:0036184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_highly_transcribed_RNA_polymerase_II_genes_during_vegetative_growth","termid":"PBO:0036184"}


id: PBO:0051412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-50 (non-functional)","termid":"PBO:0051412"}


id: SO:0001221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by histone modification.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced","termid":"SO:0000893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_histone_modification","synonyms":[{"name":"silenced by histone modification","type":"exact"}],"termid":"SO:0001221"}


id: GO:0032474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an otolith are generated and organized.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"otolith development","termid":"GO:0048840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otolith morphogenesis","termid":"GO:0032474"}


id: PBO:0013458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase Gcd10 (predicted)","termid":"PBO:0013458"}


id: RO:0002340
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is a transportation or localization process and the outcome of this process is to move c to a destination that is part of some s, where the start location of c is part of the region that surrounds s.","direct_ancestors":[{"relation_name":"is_a","term_name":"transports","termid":"RO:0002020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imports","termid":"RO:0002340"}


id: GO:0098728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell, to produce a daughter stem cell and a daughter germ cell which will divide to form one or more gametes.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line stem cell division","termid":"GO:0042078"},{"relation_name":"is_a","term_name":"asymmetric stem cell division","termid":"GO:0098722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germline stem cell asymmetric division","termid":"GO:0098728"}


id: GO:0106409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',3'-c-di-AMP + H2O = 5'-O-phosphonoadenylyl-(3'-5')-adenosine + H+.","definition_xrefs":["PMID:21909268","RHEA:54420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"cyclic-di-AMP phosphodiesterase activity","secondary_identifiers":["MetaCyc:RXN-19814","EC:3.1.4.59"],"termid":"GO:0106409"}


id: GO:0052410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving chitin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall chitin (obsolete GO:0052410)","termid":"GO:0052410"}


id: GO:1904191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of cyclin-dependent protein serine/threonine kinase activity that is involved in meiotic nuclear division.","definition_xrefs":["PMID:15791259","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic nuclear division","termid":"GO:0040020"},{"relation_name":"is_a","term_name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0045737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in meiotic nuclear division","synonyms":[{"name":"activation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"narrow"},{"name":"positive regulation of CDK activity involved in meiotic nuclear division","type":"exact"},{"name":"positive regulation of cyclin-dependent protein kinase activity involved in meiosis","type":"broad"},{"name":"stimulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"narrow"},{"name":"up regulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"},{"name":"up-regulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"},{"name":"upregulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"}],"termid":"GO:1904191"}


id: PBO:0066465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 3","termid":"PBO:0066465"}


id: PBO:0072320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 6","termid":"PBO:0072320"}


id: PBO:0113456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of  tail-anchored proteins proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for meiotic nuclear division; Get1p and Get2p form an aqueous channel for protein translocation and insertion into the membrane","termid":"PBO:0113456"}


id: PBO:0112995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenylate kinase, required for purine metabolism; controls ATP homeostasis; localized to the cytoplasm and the mitochondria; lacks cleavable signal sequence; protein abundance increases in response to DNA replication stress; mutations affecting Adk1p catalytic activity deregulate expression of phosphate utilization genes PHO5 and PHO84; human homolog AK1 can complement yeast adk1 mutant","termid":"PBO:0112995"}


id: PBO:0061259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like B","termid":"PBO:0061259"}


id: GO:0070489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one T cell to one or more other T cells via adhesion molecules.","definition_xrefs":["PMID:12972508","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte aggregation","termid":"GO:0071593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"T cell aggregation","synonyms":[{"name":"T lymphocyte aggregation","type":"exact"},{"name":"T-cell aggregation","type":"exact"},{"name":"T-lymphocyte aggregation","type":"exact"}],"termid":"GO:0070489"}


id: PBO:0084375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Long chain fatty acyl-CoA synthetase; activates fatty acids with a preference for C12:0-C16:0 chain lengths; role in the competitive import of long-chain fatty acids and sphingoid long-chain bases; accounts for most acyl-CoA synthetase activity; localizes to lipid particles and the plasma membrane; role in sphingolipid-to-glycerolipid metabolism; forms ER foci upon replication stress; faa1 faa4 double null complemented by any of human ACSBG1, ACSL1, 3, 4, 5, 6, SLC27A2, or 4","termid":"PBO:0084375"}


id: PBO:0041559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 53","termid":"PBO:0041559"}


id: PBO:0089550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome assembly protein Fhn1","termid":"PBO:0089550"}


id: PBO:0068577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 28, pseudogene","termid":"PBO:0068577"}


id: PBO:0088862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA N-glycosylase activity","termid":"PBO:0088862"}


id: PBO:0044426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 52, pseudogene","termid":"PBO:0044426"}


id: GO:0050932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pigmented cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pigment cell differentiation","termid":"GO:0050932"}


id: PBO:0086143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for normal ER membrane biosynthesis in response to ER stress; ortholog of the FIT family of proteins involved in triglyceride droplet biosynthesis; human homolog FIT2/FITM2, a fatty acyl-CoA diphosphatase, complements the yeast null mutant; disputed role in the synthesis of inositol phospholipids from inositol; required for inositol prototrophy","termid":"PBO:0086143"}


id: PBO:0074063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 39 pseudogene 1","termid":"PBO:0074063"}


id: PBO:0051158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-38 (non-functional)","termid":"PBO:0051158"}


id: PBO:0113323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contributes to high inhibitor stress tolerance; deletion mutant is viable","termid":"PBO:0113323"}


id: GO:0043807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyl-2-oxobutanoate + CoA + oxidized ferredoxin = S-(2-methylpropanoyl)-CoA + CO2 + reduced ferredoxin.","definition_xrefs":["EC:1.2.7.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity","secondary_identifiers":["MetaCyc:1.2.7.7-RXN","RHEA:11712"],"synonyms":[{"name":"2-ketoisovalerate ferredoxin reductase activity","type":"related"},{"name":"2-oxoisovalerate ferredoxin reductase activity","type":"related"},{"name":"3-methyl-2-oxobutanoate synthase (ferredoxin) activity","type":"related"},{"name":"3-methyl-2-oxobutanoate:ferredoxin oxidoreductase (decarboxylating; CoA-2-methylpropanoylating)","type":"exact"},{"name":"VOR","type":"related"},{"name":"branched-chain ketoacid ferredoxin reductase activity","type":"related"},{"name":"branched-chain oxo acid ferredoxin reductase activity","type":"related"},{"name":"keto-valine-ferredoxin oxidoreductase activity","type":"related"},{"name":"ketoisovalerate ferredoxin reductase activity","type":"related"},{"name":"ketoisovalerate oxidoreductase activity","type":"related"}],"termid":"GO:0043807"}


id: PBO:0077348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 88","termid":"PBO:0077348"}


id: GO:0010278
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein transport machinery of the chloroplast outer membrane that contains at least three components Toc159, Toc75 and Toc34, interacts with precursor proteins which are imported into the chloroplast in a GTP dependant manner.","definition_xrefs":["PMID:11299338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast outer membrane","termid":"GO:0009707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"chloroplast outer membrane translocon","termid":"GO:0010278"}


id: PBO:0089132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-PM contact site phospholipid-binding protein Hob2","termid":"PBO:0089132"}


id: GO:1902276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic amylase secretion.","definition_xrefs":["GOC:jc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"pancreatic amylase secretion","termid":"GO:0036395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of pancreatic amylase secretion","termid":"GO:1902276"}


id: GO:0030890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of B cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell proliferation","termid":"GO:0030888"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte proliferation","termid":"GO:0050671"},{"relation_name":"is_a","term_name":"positive regulation of B cell activation","termid":"GO:0050871"},{"relation_name":"positively_regulates","term_name":"B cell proliferation","termid":"GO:0042100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell proliferation","synonyms":[{"name":"activation of B cell proliferation","type":"narrow"},{"name":"positive regulation of B lymphocyte proliferation","type":"exact"},{"name":"positive regulation of B-cell proliferation","type":"exact"},{"name":"positive regulation of B-lymphocyte proliferation","type":"exact"},{"name":"stimulation of B cell proliferation","type":"narrow"},{"name":"up regulation of B cell proliferation","type":"exact"},{"name":"up-regulation of B cell proliferation","type":"exact"},{"name":"upregulation of B cell proliferation","type":"exact"}],"termid":"GO:0030890"}


id: SO:0000509
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one D-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_J_C_cluster","synonyms":[{"name":"D J C cluster","type":"exact"},{"name":"D-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000509"}


id: PBO:0064234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C like 1 (inactive)","termid":"PBO:0064234"}


id: PBO:0082703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the meiotic outer plaque of the spindle pole body; involved in modifying the meiotic outer plaque that is required prior to prospore membrane formation; SPO21 has a paralog, YSW1, that arose from the whole genome duplication","termid":"PBO:0082703"}


id: PBO:0017682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transmembrane transporter Pdr1","termid":"PBO:0017682"}


id: PBO:0050663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 1 like","termid":"PBO:0050663"}


id: PBO:0034804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase activator Skb5","termid":"PBO:0034804"}


id: PBO:0040712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 transcription repressor","termid":"PBO:0040712"}


id: PBO:0038876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 3","termid":"PBO:0038876"}


id: PBO:0058099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4315-1","termid":"PBO:0058099"}


id: _global:acts_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within","secondary_identifiers":["RO:0002264"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:acts_upstream_of_or_within"}


id: SO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes one or more structural features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_variant","termid":"SO:0001060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"Jannovar:structural_variant","type":"exact"},{"name":"VAT:svOverlap","type":"exact"},{"name":"structural variant","type":"related"}],"termid":"SO:0001537"}


id: PBO:0075165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein D1 polypeptide","termid":"PBO:0075165"}


id: PBO:0083118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor; required for pre-replication complex assembly","termid":"PBO:0083118"}


id: PBO:0005327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shk1 kinase binding protein 5","termid":"PBO:0005327"}


id: PBO:0003391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan endo-1,3-alpha-glucosidase Agn2","termid":"PBO:0003391"}


id: PBO:0017701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese superoxide dismutase","termid":"PBO:0017701"}


id: GO:0000274
data:
  {"annotated_genes":["SJAG_00836","SJAG_03925","SJAG_00133"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99773,103918,111947],"is_not":false,"summary":null,"term":"GO:0000274"}]},"cv_name":"cellular_component","definition":"One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the mitochondrial membrane-associated F0 proteins; is thought to prevent futile rotation of the catalytic core.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase, stator stalk","termid":"GO:0045265"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)","termid":"GO:0000276"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00836":null,"SJAG_03925":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005739"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase, stator stalk","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial proton-transporting ATP synthase, peripheral stalk","type":"exact"}],"termid":"GO:0000274","terms_by_termid":{"GO:0000274":null}}


id: PBO:0044165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-lyase","termid":"PBO:0044165"}


id: FYPO:0007256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is begins earlier than normal during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:22438582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle pole body","termid":"FYPO:0002771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"premature protein localization to meiotic spindle pole body during prophase I","synonyms":[{"name":"advanced protein localization to meiotic spindle pole body during prophase I","type":"exact"},{"name":"premature protein localisation to meiotic spindle pole body during prophase I","type":"exact"},{"name":"premature protein localization to meiotic SPB during prophase I","type":"exact"},{"name":"premature protein localization to meiotic spindle pole body during prophase of first meiotic nuclear division","type":"exact"},{"name":"premature protein localization to spindle pole body during meiotic prophase I","type":"exact"}],"termid":"FYPO:0007256"}


id: PBO:0017653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication preinitiation complex assembly protein","termid":"PBO:0017653"}


id: PBO:0052993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMA4 antisense RNA 1","termid":"PBO:0052993"}


id: FYPO:0003728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the galactosylation of one or more specific proteins, or of specific protein sites, does not occur. Protein galactosylation is the addition of a galactose residue to a protein amino acid.","definition_xrefs":["GO:0042125","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"galactose absent from glycoprotein glycan","termid":"FYPO:0003291"},{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein galactosylation during vegetative growth","synonyms":[{"name":"abolished protein galactosylation during mitotic cell cycle","type":"related"},{"name":"protein galactosylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003728"}


id: GO:0009790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo development","secondary_identifiers":["GO:0009795","Wikipedia:Embryogenesis"],"synonyms":[{"name":"embryogenesis","type":"exact"},{"name":"embryogenesis and morphogenesis","type":"broad"},{"name":"embryonal development","type":"exact"}],"termid":"GO:0009790"}


id: PBO:0043338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN8 transmembrane ER and ERGIC protein","termid":"PBO:0043338"}


id: GO:0050672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell proliferation","termid":"GO:0032945"},{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte activation","termid":"GO:0051250"},{"relation_name":"negatively_regulates","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte proliferation","synonyms":[{"name":"down regulation of lymphocyte proliferation","type":"exact"},{"name":"down-regulation of lymphocyte proliferation","type":"exact"},{"name":"downregulation of lymphocyte proliferation","type":"exact"},{"name":"inhibition of lymphocyte proliferation","type":"narrow"}],"termid":"GO:0050672"}


id: PBO:0001809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase Mag1","termid":"PBO:0001809"}


id: PBO:0004375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine kinase (predicted)","termid":"PBO:0004375"}


id: MOD:00930
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"tyrosine adduct with substrate analog inhibitor 1,2-dideoxy-2'-methyl-alpha-D-glucopyranoso-[2,1-d]-Delta2'-thiazoline.","definition_xrefs":["Unimod:514","PubMed:15795231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propyl-NAG tyrosine adduct","termid":"MOD:00930"}


id: PBO:0059377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 2","termid":"PBO:0059377"}


id: PBO:0079024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 7-1","termid":"PBO:0079024"}


id: GO:0052692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: raffinose + H2O = alpha-D-galactose + sucrose.","definition_xrefs":["RHEA:70275","PMID:20739305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-galactosidase activity","termid":"GO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"raffinose alpha-galactosidase activity","secondary_identifiers":["KEGG_REACTION:R01103","MetaCyc:RXN-11502"],"synonyms":[{"name":"alkaline alpha-galactosidase activity","type":"broad"},{"name":"raffinose galactohydrolase activity","type":"broad"},{"name":"raffinose-specific alkaline alpha-galactosidase activity","type":"exact"}],"termid":"GO:0052692"}


id: PBO:0086467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial inner membrane protein of unknown function; although similar to paralogous Sdh3p, Shh3p is not a stoichiometric subunit of either succinate dehydrogenase or of the TIM22 translocase; SHH3 has a paralog, SDH3, that arose from the whole genome duplication","termid":"PBO:0086467"}


id: GO:0009478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c554 (obsolete GO:0009478)","synonyms":[{"name":"cytochrome c554","type":"exact"}],"termid":"GO:0009478"}


id: GO:0072293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules arranged along the proximal/distal axis of the metanephric nephron acquire their identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation involved in metanephric nephron development","termid":"GO:0072272"},{"relation_name":"part_of","term_name":"metanephric nephron tubule formation","termid":"GO:0072289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"}


id: PBO:0087404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Structural component of the meiotic outer plaque; outer plaque is a membrane-organizing center that assembles on the cytoplasmic face of the spindle pole body during meiosis II and triggers the formation of the prospore membrane","termid":"PBO:0087404"}


id: PBO:0062467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 158 pseudogene","termid":"PBO:0062467"}


id: PBO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBY1 interacting BAR domain containing 2","termid":"PBO:0043131"}


id: PBO:0000104
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predominantly uniformly single copy (one to one)","termid":"PBO:0000104"}


id: GO:1904374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a kainic acid stimulus.","definition_xrefs":["PMID:17443789","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to kainic acid","termid":"GO:1904373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to kainic acid","termid":"GO:1904374"}


id: PBO:0110321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 1 (ABCC1 blood group)","termid":"PBO:0110321"}


id: PBO:0111790
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLK/STY/LAMMEr subfamily","termid":"PBO:0111790"}


id: PBO:0030095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_rapamycin","termid":"PBO:0030095"}


id: PBO:0085864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has sequence and structural similarity to flavodoxins; predicted to be palmitoylated; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085864"}


id: PBO:0038839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 9","termid":"PBO:0038839"}


id: FYECO:0000420
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ferrichrome was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ferrichrome","termid":"FYECO:0000420"}


id: PBO:0011166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1/Yta4 (predicted)","termid":"PBO:0011166"}


id: GO:0120303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism changes its pigmentation (lightening in response to a brighter environment or darkening in response to a dimmer environment) in response to a change in light intensity detected by melanopsin-expressing eye cells.","definition_xrefs":["PMID:32898924","GOC:cvs","GOC:krc","PMID:29239123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"background adaptation","termid":"GO:0120302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visually-mediated background adaptation","termid":"GO:0120303"}


id: RO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence starts during or after y if and only if the time point at which x starts is after or equivalent to the time point at which y starts. Formally: x existence starts during or after y iff α (x) >= α (y).","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_during_or_after","termid":"RO:0002496"}


id: GO:0010141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway by which guanine, xanthine and their nucleoside from purine nucleotides breakdown are converted back to purine nucleotides. The pathway is important in cells where there is no de-novo purine nucleotides biosynthesis.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete guanine, xanthine and their nucleoside salvage (obsolete GO:0010141)","synonyms":[{"name":"guanine, xanthine and their nucleoside salvage","type":"exact"}],"termid":"GO:0010141"}


id: PBO:0087525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase; complex catalyzes the oxidation of isocitrate to alpha-ketoglutarate in the TCA cycle","termid":"PBO:0087525"}


id: GO:0120288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of intramembrane cleaving aspartic-type endopeptidase activity.","definition_xrefs":["GOC:krc","PMID:32616437"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of aspartic endopeptidase activity, intramembrane cleaving (obsolete GO:0120288)","termid":"GO:0120288"}


id: PR:O14302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cyk3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokinesis protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.06c","synonyms":[{"name":"Spom972h-cyk3","type":"exact"}],"termid":"PR:O14302"}


id: PBO:0051909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha M","termid":"PBO:0051909"}


id: GO:0021843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of tangentially migrating interneurons that are not guided by attaching to extracellular substrates.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","PMID:12626695","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-independent telencephalic tangential migration","termid":"GO:0021826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-independent telencephalic tangential interneuron migration","termid":"GO:0021843"}


id: PBO:0052332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1755","termid":"PBO:0052332"}


id: GO:0010494
data:
  {"annotated_genes":["SJAG_04772","SJAG_04640","SJAG_01954","SJAG_00544","SJAG_03157","SJAG_01026","SJAG_02628","SJAG_03214","SJAG_00686","SJAG_04744","SJAG_02592","SJAG_02263","SJAG_16454","SJAG_03276","SJAG_01548","SJAG_00474","SJAG_03498","SJAG_01650","SJAG_04427","SJAG_02239","SJAG_00507","SJAG_01512","SJAG_04480","SJAG_00391","SJAG_02663","SJAG_01479","SJAG_02164","SJAG_04672","SJAG_05694","SJAG_01222","SJAG_16457","SJAG_04342","SJAG_01159","SJAG_03424","SJAG_02419","SJAG_03277","SJAG_01317","SJAG_05010","SJAG_03023","SJAG_02573","SJAG_03696","SJAG_03762","SJAG_02995","SJAG_03283"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71889,73706,78375,83691,84530,85311,85633,85851,86056,86342,86418,86460,86470,86508,87673,88667,89123,89124,90491,90681,90682,90910,92213,93241,93917,94637,95046,96036,98861,101300,101412,101680,101765,101766,102771,103043,105991,106092,107177,108109,109434,109653,109731,113372],"is_not":false,"summary":null,"term":"GO:0010494"}]},"cv_name":"cellular_component","definition":"A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.","definition_xrefs":["PMID:17284590","PMID:17601829","PMID:17967451","GOC:ans","PMID:20368989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00391":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_01026":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01650":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02663":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03498":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_04342":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic stress granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Stress_granule"],"synonyms":[{"name":"cytoplasmic mRNP granule","type":"exact"},{"name":"stress granule","type":"exact"}],"termid":"GO:0010494","terms_by_termid":{"GO:0010494":null}}


id: PBO:0052085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAZN antisense RNA 1","termid":"PBO:0052085"}


id: GO:0052054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host protease activity, the catalysis of the hydrolysis of peptide bonds in a protein. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host peptidase activity (obsolete GO:0052054)","synonyms":[{"name":"down regulation by symbiont of host protease activity","type":"narrow"},{"name":"down-regulation by symbiont of host protease activity","type":"narrow"},{"name":"downregulation by symbiont of host protease activity","type":"narrow"},{"name":"inhibition by symbiont of host protease activity","type":"narrow"},{"name":"inhibition of host protease activity","type":"narrow"},{"name":"negative regulation by symbiont of host protease activity","type":"narrow"}],"termid":"GO:0052054"}


id: GO:0043009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chordate embryonic development","termid":"GO:0043009"}


id: PBO:0067908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 210","termid":"PBO:0067908"}


id: PBO:0085662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in negative regulation of transcription; required for RNA polyadenylation; exhibits regulated interactions with both histones and SWI-SNF components; relocalizes to the cytosol in response to hypoxia; similar to mammalian HMG1 proteins","termid":"PBO:0085662"}


id: PBO:0001262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic vesicle protein, Vid24 family (predicted)","termid":"PBO:0001262"}


id: PR:Q9Y7T6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec59 gene.","definition_xrefs":["UniProtKB:Q9Y7T6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase sec59 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.10c","synonyms":[{"name":"Spom972h-sec59","type":"exact"}],"termid":"PR:Q9Y7T6"}


id: PBO:0064157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIA","termid":"PBO:0064157"}


id: MOD:00504
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-(cis,cis-delta 5,delta 8)-tetradecadienoylglycine.","definition_xrefs":["PubMed:11955008","OMSSA:79","Unimod:135#G","PubMed:11955007","PubMed:7543369","PubMed:1326520","PubMed:6436247","PubMed:1386601","RESID:AA0059#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-(cis,cis-delta 5,delta 8)-tetradecadienoylglycine","synonyms":[{"name":"(cis,cis-delta 5, delta 8)-tetradecadienoyl","type":"related"},{"name":"Myristoyl+Delta:H(-4)","type":"related"},{"name":"N-(C14:2 aliphatic acyl)glycine","type":"exact"},{"name":"myristoylation-4H (two double bonds)","type":"exact"},{"name":"ntermpepmyristoyl4hg","type":"exact"}],"termid":"MOD:00504"}


id: GO:1903283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutathione peroxidase activity.","definition_xrefs":["GO_REF:0000059","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutathione peroxidase activity","termid":"GO:1903282"},{"relation_name":"is_a","term_name":"negative regulation of peroxidase activity","termid":"GO:2000469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutathione peroxidase activity","synonyms":[{"name":"down regulation of GSH peroxidase activity","type":"exact"},{"name":"down regulation of glutathione peroxidase activity","type":"exact"},{"name":"down regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"down regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"down regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"down regulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"down-regulation of GSH peroxidase activity","type":"exact"},{"name":"down-regulation of glutathione peroxidase activity","type":"exact"},{"name":"down-regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"down-regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"down-regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"down-regulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"downregulation of GSH peroxidase activity","type":"exact"},{"name":"downregulation of glutathione peroxidase activity","type":"exact"},{"name":"downregulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"downregulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"downregulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"downregulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"inhibition of GSH peroxidase activity","type":"narrow"},{"name":"inhibition of glutathione peroxidase activity","type":"narrow"},{"name":"inhibition of glutathione:hydrogen-peroxide oxidoreductase activity","type":"narrow"},{"name":"inhibition of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"inhibition of reduced glutathione peroxidase activity","type":"narrow"},{"name":"inhibition of selenium-glutathione peroxidase activity","type":"narrow"},{"name":"negative regulation of GSH peroxidase activity","type":"exact"},{"name":"negative regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"negative regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"negative regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"negative regulation of selenium-glutathione peroxidase activity","type":"exact"}],"termid":"GO:1903283"}


id: PBO:0061423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H quinone dehydrogenase 1","termid":"PBO:0061423"}


id: GO:1901244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter to protect the cell or organism in response to the presence of a fungus.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungus (obsolete GO:1901244)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in defence response to fungi","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defence response to fungus","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defense response to fungi","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defense response to fungus","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in defence response to fungi","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defence response to fungus","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defense response to fungi","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defense response to fungus","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defence response to fungi","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defence response to fungus","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defense response to fungi","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defense response to fungus","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defence response to fungi","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defence response to fungus","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defense response to fungi","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defense response to fungus","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in defence response to fungi","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defence response to fungus","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defense response to fungi","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defense response to fungus","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defence response to fungi","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defence response to fungus","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defense response to fungi","type":"exact"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defence response to fungi","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defence response to fungus","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defense response to fungi","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defense response to fungus","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defence response to fungi","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defence response to fungus","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defense response to fungi","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defense response to fungus","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defence response to fungi","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defence response to fungus","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defense response to fungi","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defense response to fungus","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defence response to fungi","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defence response to fungus","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defense response to fungi","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defense response to fungus","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defence response to fungi","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defence response to fungus","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defense response to fungi","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defense response to fungus","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defence response to fungi","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defence response to fungus","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defense response to fungi","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defense response to fungus","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defence response to fungi","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defence response to fungus","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defense response to fungi","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defense response to fungus","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defence response to fungi","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defence response to fungus","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defense response to fungi","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defense response to fungus","type":"exact"}],"termid":"GO:1901244"}


id: GO:1990340
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha5, beta2 and gamma3 polypeptide chains.","definition_xrefs":["GOC:bhm","PMID:17453709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-15 complex","synonyms":[{"name":"laminin-523","type":"exact"}],"termid":"GO:1990340"}


id: GO:0009489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A low molecular weight mononuclear iron protein involved in electron transfer, with an iron tetrahedrally coordinated by the sulfurs of four conserved cysteine residues.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete rubredoxin (obsolete GO:0009489)","synonyms":[{"name":"rubredoxin","type":"exact"}],"termid":"GO:0009489"}


id: PBO:0049023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein nmb","termid":"PBO:0049023"}


id: PBO:0090883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC-type complex ATPase Snf21","termid":"PBO:0090883"}


id: PBO:0030646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_rate_at_high_pH","termid":"PBO:0030646"}


id: PR:O74399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein BOP1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR17605:SF0","PRO:DNx","OMA:SCHPO03387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein erb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.13c","secondary_identifiers":["UniProtKB:O74399"],"synonyms":[{"name":"Spom972h-BOP1","type":"exact"},{"name":"eukaryotic ribosome biogenesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74399"}


id: PBO:0085956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutation does not confer any obvious defects in growth, spore germination, viability, or carbohydrate utilization","termid":"PBO:0085956"}


id: GO:0008001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrinogen (obsolete GO:0008001)","synonyms":[{"name":"fibrinogen","type":"exact"}],"termid":"GO:0008001"}


id: GO:0070590
data:
  {"annotated_genes":["SJAG_03057","SJAG_04238","SJAG_04483","SJAG_03587","SJAG_03013","SJAG_00974","SJAG_04236","SJAG_03483","SJAG_01321","SJAG_04868","SJAG_04184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90593],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[86400,84875,87895,84385,113863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105412],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[100289,113864,113873,110189,105185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a spore wall. A spore wall is the specialized cell wall lying outside the cell membrane of a spore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall biogenesis","termid":"GO:0042546"},{"relation_name":"part_of","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_03587":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04483":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"spore wall biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070590","terms_by_termid":{"GO:0030476":null,"GO:0034412":null,"GO:0034413":null,"GO:0070591":null}}


id: PBO:0028043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_depolymerization_at_plus_end_at_cell_tip","termid":"PBO:0028043"}


id: FYPO:0003947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules that contain nonsense mutations is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolism phenotype","termid":"FYPO:0000294"},{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"normal nuclear mRNA catabolic process","termid":"FYPO:0002939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0000294","FYPO:0001312"],"is_obsolete":false,"name":"normal nonsense-mediated decay","synonyms":[{"name":"normal NMD","type":"exact"},{"name":"normal nonsense-mediated decay during mitotic cell cycle","type":"related"},{"name":"normal nonsense-mediated decay during vegetative growth","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"FYPO:0003947"}


id: GO:0010827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of glucose transmembrane transport","synonyms":[{"name":"regulation of glucose transport","type":"related"}],"termid":"GO:0010827"}


id: PBO:0044653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 4","termid":"PBO:0044653"}


id: FYPO:0009019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which the poportion of cells with two nuclei is higher than normal.","definition_xrefs":["PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"increased vegetative cell population binucleate index","synonyms":[{"name":"higher proportion of binucleate cells during vegetative growth","type":"exact"},{"name":"more cells with two nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0009019"}


id: PBO:0113206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; high copy suppressor of ER stress-mediated cell death; overexpression increases O2 consumption, impairs processing of COB and COX1 RNAs encoding mitochondrial oxidative phosphorylation factors, and impacts the transition from fermentative to respiratory metabolism","termid":"PBO:0113206"}


id: PBO:0108541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 6, pseudogene","termid":"PBO:0108541"}


id: PBO:0028277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_branched,_elongated,_multiseptate_vegetative_cell","termid":"PBO:0028277"}


id: PBO:0056630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 10","termid":"PBO:0056630"}


id: GO:0018332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient adenylylation of threonine to form N6-(phospho-5'-adenosine)-L-threonine, found in the active site of bovine phosphodiesterase I.","definition_xrefs":["RESID:AA0267"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-(phospho-5'-adenosine)-L-threonine (obsolete GO:0018332)","termid":"GO:0018332"}


id: PBO:0084077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein of the rho subfamily of Ras-like proteins; involved in establishment of cell polarity; regulates protein kinase C (Pkc1p) and the cell wall synthesizing enzyme 1,3-beta-glucan synthase (Fks1p and Gsc2p)","termid":"PBO:0084077"}


id: SO:0000479
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is trans-spliced.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"trans_spliced","termid":"SO:0000870"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_spliced_transcript","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:trans_splicing","type":"exact"},{"name":"trans spliced transcript","type":"exact"},{"name":"trans-spliced transcript","type":"exact"}],"termid":"SO:0000479"}


id: PR:O94612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-related protein FAM58A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized cyclin-L1-like protein C1296.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.05c","secondary_identifiers":["UniProtKB:O94612"],"synonyms":[{"name":"Spom972h-FAM58A","type":"exact"}],"termid":"PR:O94612"}


id: GO:0046400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving keto-3-deoxy-D-manno-octulosonic acid, an acidic sugar present in lipopolysaccharides of the outer membranes of some Gram-negative bacteria.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"keto-3-deoxy-D-manno-octulosonic acid metabolic process","synonyms":[{"name":"KDO metabolic process","type":"exact"},{"name":"KDO metabolism","type":"exact"},{"name":"keto-3-deoxy-D-manno-octulosonic acid metabolism","type":"exact"},{"name":"ketodeoxyoctanoate metabolic process","type":"related"}],"termid":"GO:0046400"}


id: SO:0000463
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes more than one transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_alternately_spliced_transcripts","synonyms":[{"name":"encodes alternately spliced transcripts","type":"exact"}],"termid":"SO:0000463"}


id: PBO:0088841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin Phb2","termid":"PBO:0088841"}


id: FYPO:0001528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal GTP binding","termid":"FYPO:0001528"}


id: GO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within involuntary skeletal muscle tissue, resulting in a change in muscle geometry. This process occurs in the diaphragm. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The diaphragm is a striated muscle that is necessary for the process of respiratory gaseous exchange.","definition_xrefs":["GOC:dph","GOC:mtg_muscle","PMID:12458206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"involuntary skeletal muscle contraction","termid":"GO:0003011"},{"relation_name":"is_a","term_name":"respiratory system process","termid":"GO:0003016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diaphragm contraction","termid":"GO:0002086"}


id: GO:0007625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism relating to grooming, cleaning and brushing to remove dirt and parasites.","definition_xrefs":["GOC:pr","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"grooming behavior","synonyms":[{"name":"grooming behaviour","type":"exact"}],"termid":"GO:0007625"}


id: PBO:0044689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discoidin domain receptor tyrosine kinase 1","termid":"PBO:0044689"}


id: GO:0018837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-2 H-benzo[h]chromene-2-carboxylate = cis -4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate.","definition_xrefs":["UM-BBD_reactionID:r0502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"2-hydroxy-2H-benzo[h]chromene-2-carboxylate isomerase activity","termid":"GO:0018837"}


id: GO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Growth of a pathogenic organism that results in penetration into cells or tissues of the host organism. This often (but not necessarily) includes a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue.","definition_xrefs":["GOC:mcc","PMID:9728395"],"gene_count":0,"genotype_count":0,"name":"obsolete invasive growth (obsolete GO:0001404)","synonyms":[{"name":"invasive growth","type":"exact"},{"name":"tissue invasion","type":"exact"}],"termid":"GO:0001404"}


id: PBO:0051057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3-9","termid":"PBO:0051057"}


id: PBO:0061916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 4","termid":"PBO:0061916"}


id: GO:0070474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"regulation of uterine smooth muscle contraction","termid":"GO:0070472"},{"relation_name":"positively_regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of uterine smooth muscle contraction","synonyms":[{"name":"activation of uterine smooth muscle contraction","type":"narrow"},{"name":"positive regulation of myometrial contraction","type":"exact"},{"name":"positive regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"positive regulation of myometrium contraction","type":"exact"},{"name":"stimulation of uterine smooth muscle contraction","type":"narrow"},{"name":"up regulation of uterine smooth muscle contraction","type":"exact"},{"name":"up-regulation of uterine smooth muscle contraction","type":"exact"},{"name":"upregulation of uterine smooth muscle contraction","type":"exact"}],"termid":"GO:0070474"}


id: FYPO:0006774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore septin ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:20123972","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiotic cell cycle","termid":"FYPO:0004095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to prospore septin ring","synonyms":[{"name":"normal protein localisation to prospore septin ring","type":"exact"},{"name":"normal protein localization to forespore septin ring","type":"exact"},{"name":"normal protein localization to septin ring during prospore membrane assembly","type":"exact"}],"termid":"FYPO:0006774"}


id: PBO:0069091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 338, pseudogene","termid":"PBO:0069091"}


id: GO:0034455
data:
  {"annotated_genes":["SJAG_05187","SJAG_00879","SJAG_02702","SJAG_03341","SJAG_02608","SJAG_01764"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85391,88171,88751,102077,103071,106679],"is_not":false,"summary":null,"term":"GO:0034455"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a subcomplex of the 90S preribosome and is required for the subsequent assembly of the rest of the preribosome. In S. cerevisiae, it is composed of Utp5p, Utp4p, Nan1p, Utp8p, Utp9p, Utp10 and Utp15p.","definition_xrefs":["PMID:17515605","GOC:krc","GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00879":null,"SJAG_01764":null,"SJAG_02608":null,"SJAG_02702":null,"SJAG_03341":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005730","GO:0005575"],"is_obsolete":false,"name":"t-UTP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Nan1p-containing subcomplex of 90S preribosome","type":"exact"}],"termid":"GO:0034455","terms_by_termid":{"GO:0034455":null}}


id: PBO:0063903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIGY divergent transcript","termid":"PBO:0063903"}


id: PATO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer whose structure which does not deteriorate.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"degeneration","termid":"PATO:0002037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-degenerate","synonyms":[{"name":"not degenerate","type":"exact"}],"termid":"PATO:0002038"}


id: PBO:0056495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3","termid":"PBO:0056495"}


id: GO:0043606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving formamide, the simplest amide, HCONH2, derived from formic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formamide metabolic process","synonyms":[{"name":"formamide metabolism","type":"exact"}],"termid":"GO:0043606"}


id: PBO:0049103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 160","termid":"PBO:0049103"}


id: MOD:01940
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an asparagine and the following glutamic acid residue with the formation of (2-aminosuccinimidyl)pentanedioic acid and the release of ammonia.","definition_xrefs":["RESID:AA0593#ASN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-(2-aminosuccinimidyl)pentanedioic acid","termid":"MOD:01946"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)pentanedioic acid (Asn)","synonyms":[{"name":"(4S)-4-[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]-5-oxopentanoic acid","type":"exact"},{"name":"2-(2-aminosuccinimidyl)pentanedioic acid","type":"exact"},{"name":"aspartimide glutamic acid","type":"exact"}],"termid":"MOD:01940"}


id: GO:0022841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a potassium ion across a membrane via a narrow pore channel that is open even in an unstimulated or 'resting' state.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"leak channel activity","termid":"GO:0022840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"potassium ion leak channel activity","termid":"GO:0022841"}


id: FYPO:0003588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the increase in gross chromosomal rearrangements that normally results from processing arrested replication forks is enhanced, i.e. the incidence of rearrangement increases more than in wild type when an arrested fork is processed.","definition_xrefs":["PMID:23093942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"increased gross chromosomal rearrangement during replication fork processing","termid":"FYPO:0003588"}


id: GO:0120137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency or rate of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity.","definition_xrefs":["PMID:23407971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0062002"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0120137"}


id: PBO:0040478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 1 like","termid":"PBO:0040478"}


id: SO:0000680
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A start codon that is not the usual AUG sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"start_codon","termid":"SO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_canonical_start_codon","synonyms":[{"name":"non ATG start codon","type":"exact"},{"name":"non canonical start codon","type":"exact"},{"name":"non-canonical start codon","type":"exact"}],"termid":"SO:0000680"}


id: PBO:0045131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 1","termid":"PBO:0045131"}


id: GO:0015987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers GTP synthesis.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy coupled proton transport, down electrochemical gradient","termid":"GO:0015985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"GTP synthesis coupled proton transport","termid":"GO:0015987"}


id: PBO:0045279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 30","termid":"PBO:0045279"}


id: PBO:0028248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_actin_cable","termid":"PBO:0028248"}


id: GO:0102444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isorhamnetin + S-adenosyl-L-methionine = 3,3'-dimethylquercetin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"isorhamnetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13929"],"termid":"GO:0102444"}


id: PBO:0086910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative X-Pro aminopeptidase; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YFR006W is not an essential gene","termid":"PBO:0086910"}


id: SO:0000630
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A start codon upstream of the ORF.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_region","termid":"SO:0000837"},{"relation_name":"part_of","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream_AUG_codon","synonyms":[{"name":"upstream AUG codon","type":"exact"}],"termid":"SO:0000630"}


id: PBO:0075612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase 1","termid":"PBO:0075612"}


id: PBO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previusly annotated as dubious","termid":"PBO:0002317"}


id: GO:0003899
data:
  {"annotated_genes":["SJAG_00731","SJAG_01765","SJAG_00119","SJAG_04408","SJAG_01313","SJAG_16460","SJAG_04261","SJAG_04994","SJAG_04106","SJAG_02506","SJAG_03921","SJAG_02600","SJAG_03468","SJAG_00458","SJAG_04161","SJAG_02070","SJAG_04934","SJAG_04894","SJAG_03761","SJAG_02627","SJAG_00399","SJAG_03035","SJAG_00619","SJAG_03144","SJAG_03578","SJAG_01444","SJAG_03014","SJAG_02653","SJAG_04030","SJAG_01562","SJAG_00637","SJAG_02101","SJAG_03181","SJAG_01713"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85714,88164,90039,90226,91266,92010,97622,97661,97897,98654,100980,101896,105385,105893,108491,109918,111770,112563,112870],"is_not":false,"summary":null,"term":"GO:0003899"},{"annotations":[95537,99075,101431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003896"},{"annotations":[109257,98801,90040,109919,110324,99464,106796,101897,88165,85715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001054"},{"annotations":[110775,92947,99465,109920,90041,101898,90229,88166,103814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001055"},{"annotations":[89140,98802,99466,109921,85716,94289,90042,88167,101899,104550,107583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001056"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:pf","EC:2.7.7.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-3' RNA polymerase activity","termid":"GO:0034062"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00399":null,"SJAG_00458":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02506":null,"SJAG_02600":null,"SJAG_02627":null,"SJAG_02653":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03761":null,"SJAG_03921":null,"SJAG_04030":null,"SJAG_04106":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04894":null,"SJAG_04934":null,"SJAG_04994":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0140098","GO:0016779"],"is_obsolete":false,"name":"DNA-directed 5'-3' RNA polymerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-174425","Reactome:R-HSA-76576","Reactome:R-HSA-167113","Reactome:R-HSA-427366","Reactome:R-HSA-9697084","Reactome:R-HSA-68913","Reactome:R-HSA-74986","Reactome:R-HSA-5601926","Reactome:R-HSA-6781824","Reactome:R-HSA-167115","Reactome:R-HSA-167136","Reactome:R-HSA-75873","Reactome:R-HSA-9670149","Reactome:R-HSA-9697085","Reactome:R-HSA-167121","Reactome:R-HSA-203901","Reactome:R-HSA-167117","GO:0000129","Reactome:R-HSA-111264","Reactome:R-HSA-75869","Reactome:R-HSA-75850","MetaCyc:DNA-DIRECTED-RNA-POLYMERASE-RXN"],"synonyms":[{"name":"C RNA formation factors","type":"related"},{"name":"C ribonucleic acid formation factors","type":"related"},{"name":"DNA-dependent RNA nucleotidyltransferase activity","type":"related"},{"name":"DNA-dependent RNA polymerase activity","type":"related"},{"name":"DNA-dependent ribonucleate nucleotidyltransferase activity","type":"related"},{"name":"DNA-directed RNA polymerase I activity","type":"narrow"},{"name":"DNA-directed RNA polymerase II activity","type":"narrow"},{"name":"DNA-directed RNA polymerase III activity","type":"narrow"},{"name":"DNA-directed RNA polymerase activity","type":"broad"},{"name":"RNA nucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"RNA polymerase I activity","type":"narrow"},{"name":"RNA polymerase II activity","type":"narrow"},{"name":"RNA polymerase III activity","type":"narrow"},{"name":"deoxyribonucleic acid-dependent ribonucleic acid polymerase activity","type":"related"},{"name":"nucleoside-triphosphate:RNA nucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"transcriptase","type":"broad"}],"termid":"GO:0003899","terms_by_termid":{"GO:0001054":null,"GO:0001055":null,"GO:0001056":null,"GO:0003896":null,"GO:0003899":null}}


id: PBO:0091029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp20","termid":"PBO:0091029"}


id: PBO:0049072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 89A","termid":"PBO:0049072"}


id: PBO:0111851
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helix-hairpin-helix","termid":"PBO:0111851"}


id: FYPO:0007954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the rate or speed of microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is abnormal.","definition_xrefs":["PomBase:mlr","PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}


id: MOD:01787
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-tyrosine residues through their 5' positions by amine nitrogen to form 5'-(L-tyros-5'-yl)amino-L-tyrosine.","definition_xrefs":["RESID:AA0459","PubMed:18781570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-(L-tyros-5'-yl)amino-L-tyrosine","synonyms":[{"name":"(2S,2'S)-3,3'-[iminobis(4-hydroxybenzene-3,1-diyl)]bis(2-aminopropanoic acid)","type":"exact"},{"name":"5'-(L-tyros-5'-yl)amino-L-tyrosine","type":"exact"},{"name":"5'-[(tyros-5'-yl)amino]tyrosine","type":"exact"},{"name":"5'-tyrosyl-5'-aminotyrosine","type":"exact"},{"name":"CROSSLNK 5'-tyrosyl-5'-aminotyrosine (Tyr-Tyr) (interchain)","type":"exact"},{"name":"bis(LTQ) linkage","type":"exact"}],"termid":"MOD:01787"}


id: GO:0075151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075151)","synonyms":[{"name":"positive regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075151"}


id: GO:0016775
data:
  {"annotated_genes":["SJAG_01587","SJAG_02183","SJAG_00331"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91389,114354,87295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000155"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a nitrogenous group (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphotransferase activity, nitrogenous group as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.3.-"],"termid":"GO:0016775","terms_by_termid":{"GO:0000155":null}}


id: PBO:0088132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; is conserved in mammals; predicted to contain eleven transmembrane helices; interacts with Pdr5p, a protein involved in multidrug resistance","termid":"PBO:0088132"}


id: PBO:0034800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress associated Endoplasmic Reticulum protein Tam14","termid":"PBO:0034800"}


id: GO:0021913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results in the commitment of a cell to become an interneuron in the ventral spinal cord.","definition_xrefs":["GOC:dph","GOC:jid","PMID:11262869","GO_REF:0000021","GOC:cls","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification (obsolete GO:0021913)","termid":"GO:0021913"}


id: PBO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 18","termid":"PBO:0072048"}


id: PBO:0052998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 2 pseudogene 1","termid":"PBO:0052998"}


id: FYPO:0001882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of one or more enzymes that degrades cell wall polysaccharides than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to cell wall-degrading enzymes","synonyms":[{"name":"resistance to Lyticase","type":"narrow"},{"name":"resistance to Novozyme 234","type":"narrow"},{"name":"resistance to Zymolyase","type":"narrow"},{"name":"resistance to cell wall-degrading enzymes during mitotic cell cycle","type":"related"},{"name":"resistance to cell wall-degrading enzymes during vegetative growth","type":"exact"},{"name":"resistant to cell wall-degrading enzymes","type":"exact"}],"termid":"FYPO:0001882"}


id: SO:0001655
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the molecule, interacts selectively and non-covalently with nucleotide residues.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_binding_site","synonyms":[{"name":"np_bind","type":"exact"},{"name":"nucleotide binding site","type":"exact"}],"termid":"SO:0001655"}


id: PBO:0109368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 4B","termid":"PBO:0109368"}


id: PBO:0070054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 11, pseudogene","termid":"PBO:0070054"}


id: PBO:0017943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family Rrp1 (predicted)","termid":"PBO:0017943"}


id: PR:O74396
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps901 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 9a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.10","synonyms":[{"name":"Spom972h-vps901","type":"exact"},{"name":"vacuolar protein-targeting protein 9a (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74396"}


id: PBO:0050234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 12","termid":"PBO:0050234"}


id: PBO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase subunit Bgs2","termid":"PBO:0001858"}


id: MOD:01404
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-asparagine residue to form L-asparagine thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0481","PubMed:7592021","PubMed:8557573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,3-diamino-3-oxopropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1,3-bisazanyl-3-oxopropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Asn-Cys)","type":"exact"},{"name":"L-asparagine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01404"}


id: PBO:0073823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A2 intronic transcript 1","termid":"PBO:0073823"}


id: GO:0010540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin from the apex to base of an organ, including the shoot, leaf, primary root, or lateral root.","definition_xrefs":["PMID:10677441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"basipetal auxin transport","termid":"GO:0010540"}


id: RO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A child nucleus relationship in which the cells are part of a hermaphroditic organism","direct_ancestors":[{"relation_name":"is_a","term_name":"child_nucleus_of","termid":"RO:0002476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"child_nucleus_of_in_hermaphrodite","termid":"RO:0002477"}


id: PBO:0088537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit H","termid":"PBO:0088537"}


id: GO:1900185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xanthone-containing compound biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"positively_regulates","term_name":"xanthone-containing compound biosynthetic process","termid":"GO:2001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of xanthone-containing compound biosynthetic process","synonyms":[{"name":"up regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"activation of xanthone biosynthesis","type":"narrow"},{"name":"activation of xanthone biosynthetic process","type":"narrow"},{"name":"activation of xanthone-containing compound anabolism","type":"exact"},{"name":"activation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"activation of xanthone-containing compound biosynthetic process","type":"narrow"},{"name":"activation of xanthone-containing compound formation","type":"exact"},{"name":"activation of xanthone-containing compound synthesis","type":"exact"},{"name":"positive regulation of xanthone biosynthesis","type":"narrow"},{"name":"positive regulation of xanthone biosynthetic process","type":"narrow"},{"name":"positive regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"positive regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"positive regulation of xanthone-containing compound formation","type":"exact"},{"name":"positive regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"up regulation of xanthone biosynthesis","type":"narrow"},{"name":"up regulation of xanthone biosynthetic process","type":"narrow"},{"name":"up regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"up regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"up regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"up regulation of xanthone-containing compound formation","type":"exact"},{"name":"up-regulation of xanthone biosynthesis","type":"narrow"},{"name":"up-regulation of xanthone biosynthetic process","type":"narrow"},{"name":"up-regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"up-regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"up-regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"up-regulation of xanthone-containing compound formation","type":"exact"},{"name":"up-regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"upregulation of xanthone biosynthesis","type":"narrow"},{"name":"upregulation of xanthone biosynthetic process","type":"narrow"},{"name":"upregulation of xanthone-containing compound anabolism","type":"exact"},{"name":"upregulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"upregulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"upregulation of xanthone-containing compound formation","type":"exact"},{"name":"upregulation of xanthone-containing compound synthesis","type":"exact"}],"termid":"GO:1900185"}


id: GO:1904388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ncRNA transcription associated with protein coding gene TSS/TES.","definition_xrefs":["PMID:20502517","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ncRNA transcription associated with protein coding gene TSS/TES (obsolete GO:1904388)","synonyms":[{"name":"downregulation of ncRNA transcription associated with protein coding gene TSS/TES","type":"exact"}],"termid":"GO:1904388"}


id: SO:0001929
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequencer read of a mitochondrial DNA sample.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"mitochondrial_DNA","termid":"SO:0001032"},{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_DNA_read","synonyms":[{"name":"mitochondrial DNA read","type":"exact"}],"termid":"SO:0001929"}


id: GO:0044732
data:
  {"annotated_genes":["SJAG_04595","SJAG_00472","SJAG_03200","SJAG_05207","SJAG_01386","SJAG_02550","SJAG_01422","SJAG_01760","SJAG_00646","SJAG_01745","SJAG_01538","SJAG_03681","SJAG_03216","SJAG_00856","SJAG_04239","SJAG_00982","SJAG_05266","SJAG_01224","SJAG_02761","SJAG_03810","SJAG_02169","SJAG_03615","SJAG_03264","SJAG_00910","SJAG_02332","SJAG_05978","SJAG_01799","SJAG_02514","SJAG_00142","SJAG_06270","SJAG_00724","SJAG_04498","SJAG_04558","SJAG_03491","SJAG_01464","SJAG_01082","SJAG_03695","SJAG_00082","SJAG_04884","SJAG_03592","SJAG_03048","SJAG_04457","SJAG_01297","SJAG_05205","SJAG_00800","SJAG_02923","SJAG_03602","SJAG_00317","SJAG_03540","SJAG_02098","SJAG_03026","SJAG_02104","SJAG_00356","SJAG_07018","SJAG_00229","SJAG_05196","SJAG_02444","SJAG_03259","SJAG_00918","SJAG_03508","SJAG_00773","SJAG_02616","SJAG_01790","SJAG_01188","SJAG_01775","SJAG_03351","SJAG_02542","SJAG_02045","SJAG_01242","SJAG_03052","SJAG_03116","SJAG_00807","SJAG_04468","SJAG_01146","SJAG_03936","SJAG_04943","SJAG_01785","SJAG_05264","SJAG_03612","SJAG_02724","SJAG_03062","SJAG_04653","SJAG_00719","SJAG_01756","SJAG_03708","SJAG_01401","SJAG_03376","SJAG_01546","SJAG_01563","SJAG_03342","SJAG_01620","SJAG_02246","SJAG_05290","SJAG_03891","SJAG_03287","SJAG_02336","SJAG_00666","SJAG_01330","SJAG_05185","SJAG_04140","SJAG_03544","SJAG_00907","SJAG_01371","SJAG_04551","SJAG_04597","SJAG_04980","SJAG_04455","SJAG_01370","SJAG_00104","SJAG_02609","SJAG_02058","SJAG_02886","SJAG_02232","SJAG_04609","SJAG_04461","SJAG_04280","SJAG_05315","SJAG_00333","SJAG_01805","SJAG_04745","SJAG_04901","SJAG_02266","SJAG_02795","SJAG_04841","SJAG_03843","SJAG_03501","SJAG_05309","SJAG_00526","SJAG_02921","SJAG_02624","SJAG_02556","SJAG_01232","SJAG_02737","SJAG_01215","SJAG_04931","SJAG_03835","SJAG_02186"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83574,85120,85394,85766,85800,85899,86142,86278,86867,87120,87130,87269,87315,87463,87464,87511,87853,87876,88415,88642,88958,89040,89371,89581,89859,89918,90001,90064,90355,90382,90529,90536,90895,91771,92089,92400,92450,92507,92517,92599,92845,92897,92998,93416,93585,93935,94164,94407,94560,94743,95719,95783,95966,96196,96250,96317,96494,96632,96648,96710,97057,97099,97384,97734,98260,98442,98473,98930,99163,99834,99941,100009,100673,101130,101273,101451,101582,102413,102452,102479,102542,102734,102947,103200,103608,103646,104357,104444,104848,104863,104954,105135,105664,105719,106015,106281,106289,106629,106690,107030,107157,107295,107536,107603,107786,108582,108744,108872,108948,109115,109776,110597,110790,110906,111016,111054,111224,111394,111565,112002,112107,112619,112815,113037,113113,113277,113290,113363,113384,113655,114214,114239,114294,114727,114824,115253,115255,115265],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[91106,94075,99112,101481,111094,112524],"is_not":true,"summary":null,"term":"GO:0044732"},{"annotations":[92992,94405,95963],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061493"},{"annotations":[113033,108742,104949,111222,106688,105715,108946],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061496"},{"annotations":[106689,107533,98925,97097,104950,105716],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061497"},{"annotations":[97058,98931,106630,107296,87270,95967,98474,101452,102480,103247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071958"},{"annotations":[107302,102481,95785,98934,104956,98477,106632,103648,101132,108950,91773,88959,106692,110599,105721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071957"},{"annotations":[113038,111566,103201,104957],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061499"}]},"cv_name":"cellular_component","definition":"The microtubule organizing center that forms as part of the mitotic cell cycle; functionally homologous to the animal cell centrosome.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":143,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00093":null,"SJAG_00104":null,"SJAG_00142":null,"SJAG_00229":null,"SJAG_00317":null,"SJAG_00333":null,"SJAG_00356":null,"SJAG_00471":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00719":null,"SJAG_00724":null,"SJAG_00773":null,"SJAG_00800":null,"SJAG_00807":null,"SJAG_00856":null,"SJAG_00907":null,"SJAG_00910":null,"SJAG_00918":null,"SJAG_00982":null,"SJAG_01065":null,"SJAG_01082":null,"SJAG_01146":null,"SJAG_01188":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01232":null,"SJAG_01242":null,"SJAG_01293":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01386":null,"SJAG_01401":null,"SJAG_01422":null,"SJAG_01464":null,"SJAG_01538":null,"SJAG_01546":null,"SJAG_01563":null,"SJAG_01584":null,"SJAG_01620":null,"SJAG_01745":null,"SJAG_01756":null,"SJAG_01760":null,"SJAG_01775":null,"SJAG_01785":null,"SJAG_01790":null,"SJAG_01799":null,"SJAG_01805":null,"SJAG_02045":null,"SJAG_02058":null,"SJAG_02098":null,"SJAG_02104":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02232":null,"SJAG_02246":null,"SJAG_02266":null,"SJAG_02274":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02444":null,"SJAG_02514":null,"SJAG_02542":null,"SJAG_02550":null,"SJAG_02556":null,"SJAG_02609":null,"SJAG_02616":null,"SJAG_02624":null,"SJAG_02724":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02795":null,"SJAG_02886":null,"SJAG_02921":null,"SJAG_02923":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03052":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03200":null,"SJAG_03216":null,"SJAG_03259":null,"SJAG_03264":null,"SJAG_03287":null,"SJAG_03342":null,"SJAG_03351":null,"SJAG_03376":null,"SJAG_03491":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03540":null,"SJAG_03544":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03612":null,"SJAG_03615":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03708":null,"SJAG_03810":null,"SJAG_03835":null,"SJAG_03843":null,"SJAG_03891":null,"SJAG_03936":null,"SJAG_04140":null,"SJAG_04239":null,"SJAG_04280":null,"SJAG_04455":null,"SJAG_04457":null,"SJAG_04461":null,"SJAG_04468":null,"SJAG_04498":null,"SJAG_04551":null,"SJAG_04558":null,"SJAG_04595":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04653":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_04901":null,"SJAG_04931":null,"SJAG_04943":null,"SJAG_04980":null,"SJAG_05185":null,"SJAG_05196":null,"SJAG_05205":null,"SJAG_05207":null,"SJAG_05264":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05309":null,"SJAG_05315":null,"SJAG_05978":null,"SJAG_06270":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005816","GO:0015630"],"is_obsolete":false,"name":"mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32243490":null},"termid":"GO:0044732","terms_by_termid":{"GO:0044732":null,"GO:0061493":null,"GO:0061496":null,"GO:0061497":null,"GO:0061499":null,"GO:0071957":null,"GO:0071958":null}}


id: PBO:0073840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 15, pseudogene","termid":"PBO:0073840"}


id: PBO:0064283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing N1","termid":"PBO:0064283"}


id: GO:0031087
data:
  {"annotated_genes":["SJAG_02370","SJAG_04640","SJAG_03023"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88669,101682],"is_not":false,"summary":null,"term":"GO:0031087"},{"annotations":[87795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of a nuclear-transcribed mRNA that is independent of poly(A) tail shortening.","definition_xrefs":["PMID:15225542","GOC:krc","PMID:15225544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methylguanosine-cap decapping","termid":"GO:0110156"},{"relation_name":"part_of","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-independent decay","termid":"GO:0031086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03023":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"deadenylation-independent decapping of nuclear-transcribed mRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"deadenylylation-independent decapping","type":"exact"}],"termid":"GO:0031087","terms_by_termid":{"GO:0031087":null,"GO:0036450":null}}


id: GO:0035379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of carbon dioxide (CO2) from one side of a membrane to the other.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"carbon dioxide transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-1237069","Reactome:R-HSA-1247649","Reactome:R-HSA-1247645","Reactome:R-HSA-1237042"],"termid":"GO:0035379"}


id: PBO:0054769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2181","termid":"PBO:0054769"}


id: PBO:0042341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD79a molecule","termid":"PBO:0042341"}


id: PBO:0046521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane associated RNA degradation","termid":"PBO:0046521"}


id: PBO:0065890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB37, member RAS oncogene family","termid":"PBO:0065890"}


id: PBO:0049186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRHL2 divergent transcript","termid":"PBO:0049186"}


id: GO:0098794
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a synapse that is part of the post-synaptic cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynapse","termid":"GO:0098794"}


id: PBO:0002120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase (predicted)","termid":"PBO:0002120"}


id: GO:0140355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a cargo receptor and initiates endocytosis.","definition_xrefs":["PMID:15797858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"cargo receptor ligand activity","secondary_identifiers":["Reactome:R-HSA-3000074","Reactome:R-HSA-3000120","Reactome:R-HSA-3132759"],"synonyms":[{"name":"cargo","type":"related"}],"termid":"GO:0140355"}


id: PBO:0083181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the long terminal repeat (LTR) of a Ty1 element","termid":"PBO:0083181"}


id: PBO:0069594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 869, pseudogene","termid":"PBO:0069594"}


id: PBO:0048772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geminin coiled-coil domain containing","termid":"PBO:0048772"}


id: PBO:0076936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking from ER to golgi regulator","termid":"PBO:0076936"}


id: PBO:0080288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 52 pseudogene","termid":"PBO:0080288"}


id: PBO:0004639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Swf1 (predicted)","termid":"PBO:0004639"}


id: PBO:0080287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 51 pseudogene","termid":"PBO:0080287"}


id: PBO:0001278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin family protein Vps1","termid":"PBO:0001278"}


id: PBO:0046792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EZR pseudogene 1","termid":"PBO:0046792"}


id: PBO:0091341
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWItching","termid":"PBO:0091341"}


id: GO:0097656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell-cell recognition process by which a cell distinguishes between self and non self during cooperative behavior, such as early development.","definition_xrefs":["PMID:23910661","GOC:pf","PMID:21700835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell self recognition","synonyms":[{"name":"kin discrimination","type":"related"},{"name":"kin recognition","type":"broad"},{"name":"self recognition","type":"broad"}],"termid":"GO:0097656"}


id: PBO:0077891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK binding protein","termid":"PBO:0077891"}


id: FYPO:0001394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth may occur at either the new or old end of the cell, instead of exclusively at the old end, following cell division. A population of cells with this phenotype has a 1:1 mix of cells initiating growth at the new end and cells initiating growth at the old end.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal activation of monopolar cell growth","termid":"FYPO:0001393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"activation of monopolar cell growth at either end","synonyms":[{"name":"abnormal initiation of growth from either old or new end following cell division","type":"exact"},{"name":"activation of monopolar vegetative cell growth at either end","type":"exact"}],"termid":"FYPO:0001394"}


id: PBO:0038275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_insertion_and_mutation","termid":"PBO:0038275"}


id: PBO:0047338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 7","termid":"PBO:0047338"}


id: GO:2001277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-leucine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"is_a","term_name":"regulation of L-leucine biosynthetic process","termid":"GO:2001276"},{"relation_name":"negatively_regulates","term_name":"L-leucine biosynthetic process","termid":"GO:0009098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of L-leucine biosynthetic process","synonyms":[{"name":"negative regulation of L-leucine anabolism","type":"exact"},{"name":"negative regulation of L-leucine biosynthesis","type":"exact"},{"name":"negative regulation of L-leucine formation","type":"exact"},{"name":"negative regulation of L-leucine synthesis","type":"exact"},{"name":"negative regulation of leucine biosynthetic process","type":"broad"}],"termid":"GO:2001277"}


id: PBO:0064401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase","termid":"PBO:0064401"}


id: PBO:0081119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNFX1 antisense RNA 1","termid":"PBO:0081119"}


id: PBO:0017047
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PCNA","termid":"PBO:0017047"}


id: GO:0071633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroceramide + H2O = a fatty acid + dihydrosphingosine.","definition_xrefs":["PMID:10900202","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"},{"relation_name":"is_a","term_name":"N-acylsphingosine amidohydrolase activity","termid":"GO:0017040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798","GO:0016810"],"is_obsolete":false,"name":"dihydroceramidase activity","termid":"GO:0071633"}


id: PBO:0063253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta cluster","termid":"PBO:0063253"}


id: PBO:0066043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1B, member of RAS oncogene family","termid":"PBO:0066043"}


id: PBO:0055595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3031","termid":"PBO:0055595"}


id: GO:0032383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of cholesterol within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"is_a","term_name":"regulation of intracellular sterol transport","termid":"GO:0032380"},{"relation_name":"regulates","term_name":"intracellular cholesterol transport","termid":"GO:0032367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular cholesterol transport","termid":"GO:0032383"}


id: PBO:0030895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_phenotype_during_vegetative_growth","termid":"PBO:0030895"}


id: PBO:0042261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 5","termid":"PBO:0042261"}


id: PBO:0076352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 16","termid":"PBO:0076352"}


id: PBO:0080161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge X-linked 3A","termid":"PBO:0080161"}


id: PBO:0042189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D1","termid":"PBO:0042189"}


id: PBO:0050677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 4","termid":"PBO:0050677"}


id: GO:0043613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isoprene, C5H8.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprene metabolic process","termid":"GO:0043611"},{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isoprene catabolic process","synonyms":[{"name":"2-methyl-1,3-butadiene catabolic process","type":"exact"},{"name":"2-methyl-1,3-butadiene catabolism","type":"exact"},{"name":"hemiterpene catabolic process","type":"exact"},{"name":"hemiterpene catabolism","type":"exact"}],"termid":"GO:0043613"}


id: PBO:0043561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type V alpha 3 chain","termid":"PBO:0043561"}


id: PR:Q09683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A double-strand break repair protein MRE11A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00172","PRO:DNx","PANTHER:PTHR10139:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.07","secondary_identifiers":["UniProtKB:Q09683"],"synonyms":[{"name":"Spom972h-MRE11A","type":"exact"}],"termid":"PR:Q09683"}


id: GO:0000701
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90999],"is_not":false,"summary":null,"term":"GO:0000701"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of purines present in mismatches, especially opposite oxidized purines, by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic (AP) site.","definition_xrefs":["GOC:elh","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch base pair DNA N-glycosylase activity","termid":"GO:0000700"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0140097","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"purine-specific mismatch base pair DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.2.2.31"],"synonyms":[{"name":"A/G-specific adenine DNA glycosylase activity","type":"narrow"}],"termid":"GO:0000701","terms_by_termid":{"GO:0000701":null}}


