# terms

id: PATO:0001880
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having a tail or tail-like projection.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exserted","termid":"PATO:0000623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caudate","synonyms":[{"name":"caudal","type":"exact"},{"name":"tailed","type":"related"}],"termid":"PATO:0001880"}


id: GO:0050084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + H2O = D-mannitol + 2 H+ + phosphate.","definition_xrefs":["EC:3.1.3.22","RHEA:19537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"mannitol-1-phosphatase activity","secondary_identifiers":["MetaCyc:MANNITOL-1-PHOSPHATASE-RXN","KEGG_REACTION:R02167"],"synonyms":[{"name":"D-mannitol-1-phosphate phosphohydrolase activity","type":"related"},{"name":"mannitol-1-phosphate phosphatase activity","type":"related"}],"termid":"GO:0050084"}


id: PBO:0081397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 236","termid":"PBO:0081397"}


id: PBO:0053706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 908","termid":"PBO:0053706"}


id: PBO:0086883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor containing a WOPR domain; binds DNA in vitro; similar to C. albicans Wor1p transcription factor that regulates white-opaque switching; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086883"}


id: PBO:0029135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_prospore_formation","termid":"PBO:0029135"}


id: PBO:0051896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 5","termid":"PBO:0051896"}


id: PBO:0054005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1333","termid":"PBO:0054005"}


id: PBO:0048497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ganglioside induced differentiation associated protein 1","termid":"PBO:0048497"}


id: GO:0036276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antidepressant stimulus, a mood-stimulating drug.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antidepressant","termid":"GO:0036276"}


id: PBO:0030308
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-misoriented_septum_during_vegetative_growth","termid":"PBO:0030308"}


id: PBO:0027891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_kinetochore_during_meiosis_I","termid":"PBO:0027891"}


id: PBO:0063581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo ribosomal biogenesis factor 1 pseudogene 1","termid":"PBO:0063581"}


id: PBO:0063092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAQR9 antisense RNA 1","termid":"PBO:0063092"}


id: GO:2000155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cilium-dependent cell motility.","definition_xrefs":["GOC:jl","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium-dependent cell motility","termid":"GO:1902019"},{"relation_name":"is_a","term_name":"positive regulation of cell motility","termid":"GO:2000147"},{"relation_name":"positively_regulates","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cilium-dependent cell motility","synonyms":[{"name":"positive regulation of ciliary cell motility","type":"related"}],"termid":"GO:2000155"}


id: PBO:0031782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cytokinesis","termid":"PBO:0031782"}


id: _global:different_in_magnitude_relative_to
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 different_in_magnitude_relative_to q2 if and only if magnitude(q1) NOT =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"different_in_magnitude_relative_to","termid":"_global:different_in_magnitude_relative_to"}


id: GO:0016420
data:
  {"annotated_genes":["SJAG_03972","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84291,96861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004314"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a malonyl (HOOC-CH2-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03972":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"malonyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016420","terms_by_termid":{"GO:0004314":null}}


id: PBO:0068766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 3, pseudogene","termid":"PBO:0068766"}


id: PBO:0078284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 17-1","termid":"PBO:0078284"}


id: GO:0003035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of carbon dioxide are received and are converted to a molecular signal by chemoreceptors in a carotid body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of increased carbon dioxide by chemoreceptor signaling","termid":"GO:0003021"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by carotid body chemoreceptor signaling","termid":"GO:0003029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of increased carbon dioxide by carotid body chemoreceptor signaling","synonyms":[{"name":"detection of increased carbon dioxide by carotid body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003035"}


id: PBO:0043058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin accessibility complex subunit 1","termid":"PBO:0043058"}


id: GO:0072535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of tumor necrosis factor superfamily member 11 (TNFSF11; RANKL) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tumor necrosis factor (ligand) superfamily member 11 production","synonyms":[{"name":"RANKL production","type":"exact"},{"name":"TNFSF11 production","type":"exact"},{"name":"tumor necrosis factor ligand superfamily member 11 production","type":"exact"}],"termid":"GO:0072535"}


id: PBO:0031412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tapered_cell","termid":"PBO:0031412"}


id: GO:1902034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell proliferation.","definition_xrefs":["PMID:23403623","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell proliferation","termid":"GO:1902033"},{"relation_name":"is_a","term_name":"negative regulation of hemopoiesis","termid":"GO:1903707"},{"relation_name":"is_a","term_name":"negative regulation of stem cell proliferation","termid":"GO:2000647"},{"relation_name":"negatively_regulates","term_name":"hematopoietic stem cell proliferation","termid":"GO:0071425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic stem cell proliferation","synonyms":[{"name":"down regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"down regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"down-regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"down-regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"downregulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"downregulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"inhibition of hematopoietic stem cell proliferation","type":"narrow"},{"name":"inhibition of hemopoietic stem cell proliferation","type":"narrow"},{"name":"negative regulation of hemopoietic stem cell proliferation","type":"exact"}],"termid":"GO:1902034"}


id: GO:0042548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the light-dependent reaction of photosynthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"},{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"regulates","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}


id: PR:Q9P7E8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An SH3 domain-containing protein 19 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein app1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ760.02c","secondary_identifiers":["UniProtKB:Q9P7E8"],"synonyms":[{"name":"Spom972h-SH3D19","type":"exact"}],"termid":"PR:Q9P7E8"}


id: GO:0070382
data:
  {"annotated_genes":["SJAG_02368","SJAG_04509","SJAG_02529","SJAG_01189"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84057,111562],"is_not":false,"summary":null,"term":"GO:0070382"},{"annotations":[110042,89986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070319"}]},"cv_name":"cellular_component","definition":"A transport vesicle that mediates transport from an intracellular compartment to the plasma membrane, and fuses with the plasma membrane to release various cargo molecules, such as proteins or hormones, by exocytosis.","definition_xrefs":["GOC:kad","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"secretory vesicle","termid":"GO:0099503"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01189":null,"SJAG_02368":null,"SJAG_02529":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"exocytic vesicle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"exocytic constitutive secretory pathway transport vesicle","type":"exact"},{"name":"exocytotic vesicle","type":"exact"}],"termid":"GO:0070382","terms_by_termid":{"GO:0070319":null,"GO:0070382":null}}


id: PBO:0076636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 3","termid":"PBO:0076636"}


id: PBO:0038835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 1","termid":"PBO:0038835"}


id: PBO:0029133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_pole_body_absent_from_cell_after_meiosis_II","termid":"PBO:0029133"}


id: PBO:0080772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 4","termid":"PBO:0080772"}


id: PBO:0080113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously transcribed tetratricopeptide repeat containing, Y-linked","termid":"PBO:0080113"}


id: GO:0005934
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The end of a cellular bud distal to the site of attachment to the mother cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"part_of","term_name":"cellular bud","termid":"GO:0005933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cellular bud tip","termid":"GO:0005934"}


id: PBO:0086347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PtdIns-3-P binding protein that tethers the ER to vacuoles at NVJs; anchored in the ER membrane at nucleus-vacuole junctions and binds phosphatidylinositol 3-phosphate (PtdIns-3-P) in the vacuolar membrane via its Phox homology (PX) domain; expressed predominantly in late G1 to early S phase of the cell cycle; mutation affects nuclear and mitochondrial transmission to daughter buds; similar to 4 human genes, one of which (SNX14) is associated with neurological disease","termid":"PBO:0086347"}


id: SO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A snoRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_snoRNA_primary_transcript","synonyms":[{"name":"miR encoding snoRNA primary transcript","type":"exact"}],"termid":"SO:0002034"}


id: PBO:0004430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex eta subunit Cct7","termid":"PBO:0004430"}


id: PR:Q92380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec11 gene.","definition_xrefs":["UniProtKB:Q92380","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4E9.01c","synonyms":[{"name":"Spom972h-rec11","type":"exact"}],"termid":"PR:Q92380"}


id: GO:0016499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with orexin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"orexin receptor activity","termid":"GO:0016499"}


id: PBO:0072936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 16","termid":"PBO:0072936"}


id: GO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence of DNA that is a part of a hybrid type promoter that controls transcription by RNA polymerase III (Pol III). A hybrid Pol III promoter contains both regulatory elements both upstream and downstream of the transcription initiation site. An example gene with such a promoter is the S. cerevisiae U6 gene.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","termid":"GO:0000992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0000976","GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase III hybrid type promoter sequence-specific DNA binding","secondary_identifiers":["GO:0001037"],"synonyms":[{"name":"RNA polymerase III hybrid type promoter DNA binding","type":"related"}],"termid":"GO:0001039"}


id: PBO:0081652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 577","termid":"PBO:0081652"}


id: PBO:0086582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant is viable and has no detectable phenotype","termid":"PBO:0086582"}


id: GO:1903600
data:
  {"annotated_genes":["SJAG_00283","SJAG_00691"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88939,91625],"is_not":false,"summary":null,"term":"GO:1903600"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of glutaminase activity.","definition_xrefs":["GO_REF:0000088","GOC:TermGenie","PMID:14764090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_00691":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glutaminase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Sno1p-Snz1p","type":"exact"}],"termid":"GO:1903600","terms_by_termid":{"GO:1903600":null}}


id: GO:0003114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by norepinephrine","termid":"GO:0003066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by circulating norepinephrine","synonyms":[{"name":"positive regulation of heart rate by circulating noradrenaline","type":"exact"}],"termid":"GO:0003114"}


id: GO:0072764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reversine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to purine-containing compound","termid":"GO:0071415"},{"relation_name":"is_a","term_name":"response to reversine","termid":"GO:1901596"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to reversine","termid":"GO:0072764"}


id: PBO:0063721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone receptor","termid":"PBO:0063721"}


id: PBO:0081372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 211","termid":"PBO:0081372"}


id: PBO:0050698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPA12A antisense RNA 1","termid":"PBO:0050698"}


id: MOD:01216
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to O5-(carboxamidomethyl)glutamate.","definition_xrefs":["PubMed:11510821","Unimod:4#E","PubMed:12422359","OMSSA:30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized glutamic acid","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"},{"name":"carbamidomethyle","type":"exact"}],"termid":"MOD:01216"}


id: PBO:0044964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 9","termid":"PBO:0044964"}


id: PBO:0039328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 15-lipoxygenase pseudogene 1","termid":"PBO:0039328"}


id: PBO:0068151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 458","termid":"PBO:0068151"}


id: GO:0045676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of R7 differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R7 cell differentiation","termid":"GO:0045676"}


id: GO:0035422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK activity involved in innate immune response (obsolete GO:0035422)","termid":"GO:0035422"}


id: PBO:0089693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Munc family exocytic/endocytic regulator Ync13","termid":"PBO:0089693"}


id: PBO:0070135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 49 pseudogene","termid":"PBO:0070135"}


id: PBO:0049057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 62","termid":"PBO:0049057"}


id: GO:1900934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene metabolic process","termid":"GO:1900932"},{"relation_name":"positively_regulates","term_name":"nonadec-1-ene metabolic process","termid":"GO:1900876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nonadec-1-ene metabolic process","synonyms":[{"name":"activation of nonadec-1-ene metabolic process","type":"narrow"},{"name":"activation of nonadec-1-ene metabolism","type":"exact"},{"name":"positive regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"up regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"up regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"up-regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"up-regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"upregulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"upregulation of nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900934"}


id: GO:0019578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aldaric acid biosynthetic process","synonyms":[{"name":"aldaric acid anabolism","type":"exact"},{"name":"aldaric acid biosynthesis","type":"exact"},{"name":"aldaric acid formation","type":"exact"},{"name":"aldaric acid synthesis","type":"exact"}],"termid":"GO:0019578"}


id: PATO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000341 sporophytic compatability value (obsolete PATO:0000341)","termid":"PATO:0000341"}


id: PBO:0059224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 6","termid":"PBO:0059224"}


id: GO:0110163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic anaphase B (spindle phase three).","definition_xrefs":["GOC:vw","PMID:27697865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation (spindle phase three)","termid":"GO:0110162"},{"relation_name":"is_a","term_name":"negative regulation of mitotic spindle elongation","termid":"GO:1902845"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle elongation (spindle phase three)","termid":"GO:0061805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic spindle elongation (spindle phase three)","termid":"GO:0110163"}


id: PBO:0038742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTN1 divergent transcript","termid":"PBO:0038742"}


id: GO:0031393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostaglandin biosynthetic process","termid":"GO:0031392"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"negatively_regulates","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of prostaglandin biosynthetic process","synonyms":[{"name":"down regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"down-regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"downregulation of prostaglandin biosynthetic process","type":"exact"},{"name":"inhibition of prostaglandin biosynthetic process","type":"narrow"},{"name":"negative regulation of prostaglandin anabolism","type":"exact"},{"name":"negative regulation of prostaglandin biosynthesis","type":"exact"},{"name":"negative regulation of prostaglandin formation","type":"exact"},{"name":"negative regulation of prostaglandin synthesis","type":"exact"}],"termid":"GO:0031393"}


id: PBO:0054881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2295","termid":"PBO:0054881"}


id: PBO:0055345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2773","termid":"PBO:0055345"}


id: PBO:0084677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial aspartyl-tRNA synthetase; required for acylation of aspartyl-tRNA; yeast and bacterial aspartyl-, asparaginyl-, and lysyl-tRNA synthetases contain regions with high sequence similarity, suggesting a common ancestral gene","termid":"PBO:0084677"}


id: PBO:0038465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 4","termid":"PBO:0038465"}


id: PBO:0067447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 569, pseudogene","termid":"PBO:0067447"}


id: GO:0070112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"organellar chromatophore","termid":"GO:0070111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"organellar chromatophore membrane","synonyms":[{"name":"Paulinella-type chromatophore membrane","type":"exact"}],"termid":"GO:0070112"}


id: PBO:0066181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM5 antisense RNA 1","termid":"PBO:0066181"}


id: PBO:0043327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 3 pseudogene 1","termid":"PBO:0043327"}


id: PBO:0043750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7B pseudogene 4","termid":"PBO:0043750"}


id: GO:0007182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group on to a common-partner SMAD protein. A common partner SMAD protein binds to pathway-restricted SMAD proteins forming a complex that translocates to the nucleus.","definition_xrefs":["ISBN:3527303782","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete common-partner SMAD protein phosphorylation (obsolete GO:0007182)","synonyms":[{"name":"co-SMAD protein phosphorylation","type":"exact"},{"name":"common mediator SMAD protein phosphorylation","type":"exact"},{"name":"common partner SMAD protein phosphorylation","type":"exact"},{"name":"common-mediator SMAD protein phosphorylation","type":"exact"}],"termid":"GO:0007182"}


id: PBO:0054329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1722","termid":"PBO:0054329"}


id: PBO:0051320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR15-118 (pseudogene)","termid":"PBO:0051320"}


id: PBO:0054023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1354","termid":"PBO:0054023"}


id: GO:0048573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change from the vegetative to the reproductive phase as a result of detection of, or exposure to, a period of light or dark of a given length. The length of the period of light or dark required to initiate the change is set relative to a particular duration known as the 'critical day length'. The critical day length varies between species.","definition_xrefs":["GOC:pj","ISBN:0582015952","ISBN:0697037754","GOC:jid","ISBN:0709408862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"},{"relation_name":"part_of","term_name":"vegetative to reproductive phase transition of meristem","termid":"GO:0010228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoperiodism, flowering","synonyms":[{"name":"photoperiodic control of flowering time","type":"exact"},{"name":"photoperiodic control of inflorescence development","type":"exact"},{"name":"response to day length, flowering","type":"exact"},{"name":"response to night length, flowering","type":"exact"},{"name":"response to photoperiod, flowering","type":"exact"}],"termid":"GO:0048573"}


id: GO:0032338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of inhibin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"inhibin secretion","termid":"GO:0032334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of inhibin secretion","termid":"GO:0032338"}


id: PBO:0029640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_TPCK","termid":"PBO:0029640"}


id: PBO:0003848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex gamma subunit Cct3","termid":"PBO:0003848"}


id: GO:1900495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:1900494"},{"relation_name":"negatively_regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0006629","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"negative regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"down regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"down regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"down-regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"down-regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"downregulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"downregulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"inhibition of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"inhibition of butyryl-CoA biosynthetic process from acetyl-CoA","type":"narrow"},{"name":"negative regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"}],"termid":"GO:1900495"}


id: PBO:0062130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 10","termid":"PBO:0062130"}


id: PBO:0088837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex kleisin subunit Rad21","termid":"PBO:0088837"}


id: GO:0010747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of plasma membrane long-chain fatty acid transport. Plasma membrane long-chain fatty acid transport is the directed movement of long-chain fatty acids across the plasma membrane. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import across plasma membrane","termid":"GO:0010746"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of long-chain fatty acid import into cell","termid":"GO:0140214"},{"relation_name":"positively_regulates","term_name":"long-chain fatty acid import across plasma membrane","termid":"GO:0015911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of long-chain fatty acid import across plasma membrane","synonyms":[{"name":"positive regulation of plasma membrane long-chain fatty acid transport","type":"exact"}],"termid":"GO:0010747"}


id: PBO:0036403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein modifier, ubiquitin","termid":"PBO:0036403"}


id: GO:0016859
data:
  {"annotated_genes":["SJAG_00950","SJAG_01270","SJAG_03601","SJAG_00078","SJAG_00470","SJAG_04155","SJAG_01246","SJAG_02620","SJAG_04352","SJAG_01005","SJAG_03905","SJAG_03238","SJAG_02413","SJAG_01714","SJAG_02551","SJAG_02308","SJAG_00602"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91449,88886,94576,108535,113402,88109,93994,100594,111402,100780,109770,86120,103750,99031,57545,76828,101490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003755"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that interconverts cis and trans isomers. Atoms or groups are termed cis or trans to one another when they lie respectively on the same or on opposite sides of a reference plane identifiable as common among stereoisomers.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00470":null,"SJAG_00602":null,"SJAG_00950":null,"SJAG_01005":null,"SJAG_01246":null,"SJAG_01270":null,"SJAG_01714":null,"SJAG_02308":null,"SJAG_02413":null,"SJAG_02551":null,"SJAG_02620":null,"SJAG_03238":null,"SJAG_03601":null,"SJAG_03905":null,"SJAG_04155":null,"SJAG_04352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cis-trans isomerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:5.2.-.-"],"termid":"GO:0016859","terms_by_termid":{"GO:0003755":null}}


id: PBO:0057189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 361","termid":"PBO:0057189"}


id: GO:1990406
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane, G protein-coupled signaling receptor complex recognized by calcitonin gene-related peptides (CGRP).","definition_xrefs":["PMID:20826335","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor complex","termid":"GO:1903439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"CGRP receptor complex","synonyms":[{"name":"CGRP-R complex","type":"exact"},{"name":"Calcitonin-gene-related peptide receptor complex","type":"exact"},{"name":"calcitonin gene-related polypeptide receptor complex","type":"exact"}],"termid":"GO:1990406"}


id: GO:0075021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont cAMP mediated signal transduction during appressorium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cAMP-mediated activation of appressorium formation (obsolete GO:0075021)","synonyms":[{"name":"cyclic AMP mediated activation of appressorium formation","type":"exact"}],"termid":"GO:0075021"}


id: GO:0102345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxylignoceroyl-CoA(4-) = trans-2-tetracosenoyl-CoA + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.134"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-lignoceroyl-CoA dehydratase activity (obsolete GO:0102345)","termid":"GO:0102345"}


id: PBO:0011471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human SLC5A family","termid":"PBO:0011471"}


id: SO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000244 four_cutter_restriction_site (obsolete SO:0000244)","synonyms":[{"name":"4-cutter_restriction_site","type":"related"},{"name":"four-cutter_restriction_sit","type":"related"}],"termid":"SO:0000244"}


id: PBO:0052671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 39","termid":"PBO:0052671"}


id: GO:0044656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a post-lysosomal vacuole, a membrane-bounded intracellular vesicle formed late in the endocytic pathway when the pH in the vacuole becomes neutral prior to exocytosis.","definition_xrefs":["GOC:rjd","PMID:22008230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle size","termid":"GO:0097494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-lysosomal vacuole size","synonyms":[{"name":"regulation of post-lysosome size","type":"exact"},{"name":"regulation of postlysosomal vacuole size","type":"exact"},{"name":"regulation of postlysosome vacuole size","type":"exact"}],"termid":"GO:0044656"}


id: PBO:0066354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 1 pseudogene 2","termid":"PBO:0066354"}


id: GO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resumption of the mitotic cell division cycle by pheromone-arrested cells that have not mated. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["PMID:9927449","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"re-entry into mitotic cell cycle","termid":"GO:0000320"},{"relation_name":"is_a","term_name":"adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion","termid":"GO:0000754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"re-entry into mitotic cell cycle after pheromone arrest","termid":"GO:0000321"}


id: GO:1902090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumagillin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23488861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"fumagillin biosynthetic process","termid":"GO:1902086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of fumagillin biosynthetic process","synonyms":[{"name":"regulation of fumagillin anabolism","type":"exact"},{"name":"regulation of fumagillin biosynthesis","type":"exact"},{"name":"regulation of fumagillin formation","type":"exact"},{"name":"regulation of fumagillin synthesis","type":"exact"}],"termid":"GO:1902090"}


id: GO:0019058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.","definition_xrefs":["ISBN:1555811272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral life cycle","secondary_identifiers":["GO:0019067"],"synonyms":[{"name":"lytic viral life cycle","type":"related"},{"name":"viral assembly, maturation, egress, and release","type":"narrow"},{"name":"viral infectious cycle","type":"related"},{"name":"viral replication","type":"related"}],"termid":"GO:0019058"}


id: PBO:0066162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome binding factor A","termid":"PBO:0066162"}


id: GO:0150177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylethanolamine metabolic process.","definition_xrefs":["GOC:bc","PMID:30074985","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylethanolamine metabolic process","termid":"GO:0150175"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"phosphatidylethanolamine metabolic process","termid":"GO:0046337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidylethanolamine metabolic process","termid":"GO:0150177"}


id: GO:0099015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The catabolic breakdown of the DNA of a host chromosome by a virus. This occurs during infection of bacteria by some phages. It frees up a large pool of nucleoside 5'-triphophates for use in viral DNA synthesis.","definition_xrefs":["PMID:335083","PMID:3972821","PMID:5263754","PMID:163355","VZ:3947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolism by virus of host DNA","termid":"GO:0039637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"degradation of host chromosome by virus","termid":"GO:0099015"}


id: PBO:0017424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_proper_part","termid":"PBO:0017424"}


id: GO:0102498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + maltose = 2 glucose.","definition_xrefs":["PMID:16343940","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"maltose glucosidase activity","secondary_identifiers":["MetaCyc:RXN-15910"],"termid":"GO:0102498"}


id: PBO:0060017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 5","termid":"PBO:0060017"}


id: GO:1900136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine activity","termid":"GO:0060300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine activity","termid":"GO:1900136"}


id: PBO:0084218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog of nuclear distribution factor NudE; NUDEL; interacts with Pac1p and regulates dynein targeting to microtubule plus ends","termid":"PBO:0084218"}


id: PBO:0111644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone/ATP-dependent chromatin remodeller, SMARCAD1 family Fft1","termid":"PBO:0111644"}


id: PBO:0075265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 18","termid":"PBO:0075265"}


id: GO:0050600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11,12-saturated fatty acyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (11E)-delta11-fatty acyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"acyl-CoA 11-(E)-desaturase activity","secondary_identifiers":["EC:1.14.19.24","MetaCyc:1.14.99.31-RXN"],"synonyms":[{"name":"acyl-CoA delta11-desaturase activity","type":"broad"},{"name":"myristoyl-CoA 11-(E) desaturase activity","type":"narrow"}],"termid":"GO:0050600"}


id: GO:0004419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetoacetate + acetyl-CoA.","definition_xrefs":["RHEA:24404","EC:4.1.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA lyase activity","secondary_identifiers":["MetaCyc:HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN","KEGG_REACTION:R01360","Reactome:R-HSA-74180","Reactome:R-HSA-6788597"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutarate-CoA lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl CoA cleaving enzyme","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA lyase activity","type":"related"},{"name":"HMG-CoA lyase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A lyase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A-cleaving enzyme","type":"related"}],"termid":"GO:0004419"}


id: GO:0052603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-chloro-4-nitrosobenzene + NADPH + H+ = 1-chloro-4-hydroxylaminobenzene + NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-8834"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-chloro-4-nitrosobenzene nitroreductase activity (obsolete GO:0052603)","secondary_identifiers":["UM-BBD_enzymeID:e0245"],"termid":"GO:0052603"}


id: PBO:0075861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 9, pseudogene","termid":"PBO:0075861"}


id: PBO:0061281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 2","termid":"PBO:0061281"}


id: PR:P14605
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cyr1 gene.","definition_xrefs":["UniProtKB:P14605","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.03","synonyms":[{"name":"ATP pyrophosphate-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cyr1","type":"exact"},{"name":"adenylyl cyclase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P14605"}


id: PBO:0030685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_morphology","termid":"PBO:0030685"}


id: FYPO:0003633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which U1 snRNP binding by a gene product does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex binding","termid":"FYPO:0003632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished U1 snRNP binding","synonyms":[{"name":"U1 snRNP binding abolished","type":"exact"}],"termid":"FYPO:0003633"}


id: FYPO:0000120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0005447"],"is_obsolete":false,"name":"abnormal spindle","secondary_identifiers":["FYPO:0000367"],"synonyms":[{"name":"spindle defects","type":"exact"}],"termid":"FYPO:0000120"}


id: PR:Q10294
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pac2 gene.","definition_xrefs":["UniProtKB:Q10294","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-independent regulatory protein pac2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.11","synonyms":[{"name":"Spom972h-pac2","type":"exact"}],"termid":"PR:Q10294"}


id: GO:0071395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to jasmonic acid","termid":"GO:0009753"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to jasmonic acid stimulus","termid":"GO:0071395"}


id: PBO:0005613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med19/Rox3","termid":"PBO:0005613"}


id: GO:0031396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the addition of ubiquitin groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein ubiquitination","termid":"GO:0031396"}


id: PBO:0055918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A6, pseudogene","termid":"PBO:0055918"}


id: GO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of non-professional antigen presenting cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002619"},{"relation_name":"positively_regulates","term_name":"non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of non-professional antigen presenting cell antigen processing and presentation","synonyms":[{"name":"activation of non-professional antigen presenting cell antigen processing and presentation","type":"narrow"},{"name":"stimulation of non-professional antigen presenting cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"},{"name":"upregulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002621"}


id: PBO:0088064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-ribosomal 60S subunit protein L40A fusion protein; cleaved to yield ubiquitin and ribosomal protein L40A; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40A has a paralog, RPL40B, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0088064"}


id: GO:0042252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of a larval imaginal disc epithelium, such that they all orient to similar coordinates.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity of larval imaginal disc epithelium","termid":"GO:0042252"}


id: PBO:0072447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 11","termid":"PBO:0072447"}


id: PBO:0053394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 323","termid":"PBO:0053394"}


id: FYPO:0006713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of malonyl-CoA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular malonyl-CoA level","synonyms":[{"name":"increased cellular malonyl-CoA level during mitotic cell cycle","type":"related"},{"name":"increased cellular malonyl-CoA level during vegetative growth","type":"exact"},{"name":"increased malonyl-CoA accumulation","type":"related"}],"termid":"FYPO:0006713"}


id: FYPO:0005587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphatidic acid measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular phosphatidic acid level","synonyms":[{"name":"increased cellular phosphatidic acid level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidic acid level during vegetative growth","type":"exact"},{"name":"increased phosphatidic acid accumulation","type":"related"}],"termid":"FYPO:0005587"}


id: GO:0140326
data:
  {"annotated_genes":["SJAG_02957","SJAG_02943","SJAG_02516","SJAG_00669","SJAG_02581","SJAG_00018","SJAG_00589","SJAG_01095","SJAG_02897","SJAG_03050","SJAG_02132","SJAG_02114","SJAG_00587","SJAG_03774","SJAG_01945","SJAG_01731","SJAG_05209"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86681,86682,86683,86684,86685,86686,86687,86688,86689,98461,101180],"is_not":false,"summary":null,"term":"GO:0140326"},{"annotations":[108666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140333"},{"annotations":[94065,90557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"},{"annotations":[95595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[90559,94067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[96313,90560,94068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[94069,95597,108609,90561,96314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[95598,108611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[94070,95599,90562,108612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of lipids from one membrane leaflet to the other, driven by ATP hydrolysis. This includes flippases and floppases.","definition_xrefs":["PMID:16828084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramembrane lipid transporter activity","termid":"GO:0140303"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03774":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0140303"],"is_obsolete":false,"name":"ATPase-coupled intramembrane lipid transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-939763","Reactome:R-HSA-947591","GO:0004012","EC:7.6.2.1","MetaCyc:3.6.3.1-RXN","GO:0008557"],"synonyms":[{"name":"ATPase-coupled phospholipid transporter activity","type":"related"},{"name":"ATPase-dependent phospholipid transporter activity","type":"related"},{"name":"aminophospholipid-transporting ATPase","type":"related"},{"name":"phospholipid flippase activity","type":"narrow"},{"name":"phospholipid translocating ATPase activity","type":"related"},{"name":"phospholipid-translocating ATPase activity","type":"related"},{"name":"phospholipid-transporting ATPase activity","type":"related"}],"termid":"GO:0140326","terms_by_termid":{"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0140326":null,"GO:0140333":null,"GO:0140345":null,"GO:0140346":null,"GO:0140351":null,"GO:0180013":null}}


id: GO:0070818
data:
  {"annotated_genes":["SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004729"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protoporphyrinogen IX + acceptor = protoporphyrin IX + reduced acceptor.","definition_xrefs":["PMID:19583219","EC:1.3.3.4","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"protoporphyrinogen oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protoporphyrinogen IX oxidase activity","type":"related"},{"name":"protoporphyrinogen-IX oxidase activity","type":"related"},{"name":"protoporphyrinogenase activity","type":"related"}],"termid":"GO:0070818","terms_by_termid":{"GO:0004729":null}}


id: PBO:0041850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1","termid":"PBO:0041850"}


id: PBO:0088774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Kri1","termid":"PBO:0088774"}


id: CHEBI:29321
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium nitroprusside","termid":"CHEBI:29321"}


id: PBO:0054627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2032","termid":"PBO:0054627"}


id: FYPO:0002410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, cell shape is altered, and cell size remains normal, and in which vacuoles are more visible (usually by microscopy) than normal.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"inviable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000257","FYPO:0000004","FYPO:0001312"],"is_obsolete":false,"name":"inviable vacuolated vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"inviable vacuolated vegetative cell with abnormal cell shape and normal cell size","type":"related"},{"name":"inviable vacuolated vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"inviable vacuolated vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"},{"name":"inviable vegetative misshapen vacuolated cell","type":"related"},{"name":"inviable, vacuolated, abnormal cell shape, normal cell size during vegetative growth","type":"exact"},{"name":"lethal; vacuolated vegetative cell, abnormal cell shape, normal cell size","type":"exact"}],"termid":"FYPO:0002410"}


id: SO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One of two segments of homology found at all three mating loci (HML, MAT and HMR).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X_region","synonyms":[{"name":"x-region","type":"exact"}],"termid":"SO:0002030"}


id: PBO:0036322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular 5'-nucleotidase, human NT5E family (predicted)","termid":"PBO:0036322"}


id: PBO:0060999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing 4","termid":"PBO:0060999"}


id: PBO:0041214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 2","termid":"PBO:0041214"}


id: SO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_donor_variant (SO:0001575) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_donor_variant","termid":"SO:0001575"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant_NMD_triggering","synonyms":[{"name":"splice donor variant-NMD triggering","type":"exact"},{"name":"splice donor variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002325"}


id: SO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Copia superfamily contain elements coding for specific proteins in this order: GAG, AP, INT, RT, RH. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copia_LTR_retrotransposon","synonyms":[{"name":"Copia LTR retrotransposon","type":"exact"},{"name":"RLC retrotransposon","type":"exact"},{"name":"Ty1 retrotransposon","type":"exact"}],"termid":"SO:0002264"}


id: PBO:0091725
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene was called cdc2L (cdc2 left) in PMID:16453669, name not added as potentially misleading","termid":"PBO:0091725"}


id: SO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a primary transcript that is transcribed, but removed from within the transcript by splicing together the sequences (exons) on either side of it.","direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Intron"],"synonyms":[{"name":"INSDC_feature:intron","type":"exact"}],"termid":"SO:0000188"}


id: PBO:0113385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant displays elongated buds and a large fraction of budded cells have only one nucleus; Interacts with CKA2 in a potentially competitive mode with the CK2 holoenzyme. Structural prediction analysis reveals a clamp-domain (rear, hinge, front), an unstructured gag region, and a lock-domain","termid":"PBO:0113385"}


id: PBO:0046307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal-neural cortex 1","termid":"PBO:0046307"}


id: GO:0006582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"melanin metabolic process","synonyms":[{"name":"melanin metabolism","type":"exact"}],"termid":"GO:0006582"}


id: GO:1900427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of cellular response to oxidative stress.","definition_xrefs":["GOC:TermGenie","PMID:10348908","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900427)","synonyms":[{"name":"regulation of adaptive response to oxidative stress by regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:1900427"}


id: PATO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition not to invade surrounding tissues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, non-invasive","termid":"PATO:0002132"}


id: PBO:0039711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A2","termid":"PBO:0039711"}


id: PBO:0004436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Hrf1 (predicted)","termid":"PBO:0004436"}


id: FYPO:0005818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the neddylation of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein neddylation","synonyms":[{"name":"normal protein neddylation during mitotic cell cycle","type":"related"},{"name":"normal protein neddylation during vegetative growth","type":"exact"},{"name":"normal protein/peptide neddylation","type":"exact"}],"termid":"FYPO:0005818"}


id: PBO:0084360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-homoserine-O-acetyltransferase; catalyzes the conversion of homoserine to O-acetyl homoserine which is the first step of the methionine biosynthetic pathway","termid":"PBO:0084360"}


id: FYPO:0004630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during meiotic cell cycle","type":"related"},{"name":"decreased transcript level during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004630"}


id: PBO:0039477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 19, pseudogene","termid":"PBO:0039477"}


id: GO:0062076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8Z,11Z,14Z)-eicosatrienoyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (5Z,8Z,11Z,14Z)-eicosatetraenoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O. Can also use a substrate with 3 double bonds (a (8Z,11Z,14Z,17Z)-eicosatetraenoyl-CoA) and add a fourth double bond (a (5Z,8Z,11Z,14Z,17Z)-eicosapentaenoyl-CoA).","definition_xrefs":["PMID:10769175","RHEA:46424","PMID:10601301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA delta5-desaturase activity","secondary_identifiers":["EC:1.14.19.44"],"synonyms":[{"name":"acyl-CoA (8-3)-desaturase","type":"exact"},{"name":"acyl-CoA D5-desaturase activity","type":"exact"},{"name":"acyl-CoA delta(5)-desaturase activity","type":"exact"}],"termid":"GO:0062076"}


id: FYPO:0008024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyphosphate measured in a cell (total or free) is lower than normal.","definition_xrefs":["PMID:35012333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular polyphosphate level","synonyms":[{"name":"decreased level of polyphosphate in cell","type":"broad"}],"termid":"FYPO:0008024"}


id: PBO:0076938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuftelin interacting protein 11","termid":"PBO:0076938"}


id: PBO:0052432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klotho beta","termid":"PBO:0052432"}


id: FYPO:0001635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-serine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular serine level","synonyms":[{"name":"normal cellular L-serine level","type":"exact"},{"name":"normal cellular serine level during mitotic cell cycle","type":"related"},{"name":"normal cellular serine level during vegetative growth","type":"exact"},{"name":"normal level of serine in cell","type":"exact"}],"termid":"FYPO:0001635"}


id: PATO:0002534
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being shaped like a plowshare.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plowshare shaped","secondary_identifiers":["Image:http\\://2.bp.blogspot.com/_TbkIC-eqFNM/S66IJ3omNWI/AAAAAAAAFSk/pzThLJPvYZw/s1600/ard-detail.gif"],"synonyms":[{"name":"plow-share shaped","type":"exact"}],"termid":"PATO:0002534"}


id: PBO:0113072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved mitochondrial YihA GTPase family member; required for efficient cellular respiration; localizes to mitochondrial inner membrane facing matrix side; associates with mitochondrial ribosome; required for de novo Cox1p synthesis at suboptimal temperatures; sumoylated under stress conditions","termid":"PBO:0113072"}


id: SO:0001259
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in an apicoplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"apicoplast_sequence","termid":"SO:0000743"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apicoplast_chromosome","synonyms":[{"name":"apicoplast chromosome","type":"exact"}],"termid":"SO:0001259"}


id: FYPO:0001248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation","synonyms":[{"name":"abnormal regulation of DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0001248"}


id: PBO:0089980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Xdj1","termid":"PBO:0089980"}


id: PBO:0066463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 1","termid":"PBO:0066463"}


id: PBO:0052907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-4","termid":"PBO:0052907"}


id: GO:0019541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate, the anion derived from propionic (propanoic) acid, a carboxylic acid important in the energy metabolism of ruminants.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"propionate metabolic process","synonyms":[{"name":"propanoate metabolic process","type":"exact"},{"name":"propanoate metabolism","type":"exact"},{"name":"propionate metabolism","type":"exact"}],"termid":"GO:0019541"}


id: GO:0140549
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane surrounding the spore core (endospore core) that separates it from its external environment.","definition_xrefs":["PMID:23202530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spore inner membrane","synonyms":[{"name":"spore membrane","type":"broad"}],"termid":"GO:0140549"}


id: PBO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp2","termid":"PBO:0002075"}


id: GO:0043909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-L-citrulline + H2O = citrulline + acetate.","definition_xrefs":["PMID:16750290","RHEA:61092","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N-acetylcitrulline deacetylase activity","synonyms":[{"name":"N-acetyl-L-citrulline deacetylase activity","type":"exact"},{"name":"acetylcitrulline deacetylase activity","type":"exact"}],"termid":"GO:0043909"}


id: PBO:0088231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase","termid":"PBO:0088231"}


id: PBO:0062923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P2Y receptor family member 10B, pseudogene","termid":"PBO:0062923"}


id: GO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological process in which dietary excess is sensed by the central nervous system, resulting in a reduction in food intake and increased energy expenditure.","definition_xrefs":["PMID:12161655","GOC:pg","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"energy homeostasis","termid":"GO:0097009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dietary excess","termid":"GO:0002021"}


id: PBO:0058144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4440","termid":"PBO:0058144"}


id: GO:0097153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile, and contributing to the apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0008233","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"cysteine-type endopeptidase activity involved in apoptotic process","secondary_identifiers":["Reactome:R-HSA-6800797"],"synonyms":[{"name":"caspase activity","type":"broad"},{"name":"metacaspase activity","type":"narrow"}],"termid":"GO:0097153"}


id: GO:0050230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA 4,6-diamino-5-formamidopyrimidine = DNA adenine + H2O.","definition_xrefs":["MetaCyc:PURINE-IMIDAZOLE-RING-CYCLASE-RXN","EC:4.3.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003824","GO:0009975","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"purine imidazole-ring cyclase activity","synonyms":[{"name":"DNA-4,6-diamino-5-formamidopyrimidine 8-C,9-N-lyase (cyclizing)","type":"related"},{"name":"DNA-4,6-diamino-5-formamidopyrimidine 8-C,9-N-lyase (cyclizing; DNA-adenine-forming)","type":"related"},{"name":"DNA-4,6-diamino-5-formamidopyrimidine C8-N9-lyase (cyclizing; DNA-adenine-forming)","type":"related"}],"termid":"GO:0050230"}


id: GO:0005150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Type I interleukin-1 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor binding","termid":"GO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-1, type I receptor binding","synonyms":[{"name":"IL-1 type I","type":"narrow"},{"name":"interleukin-1, type I receptor ligand","type":"narrow"}],"termid":"GO:0005150"}


id: GO:0061267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric interstitial fibroblast over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast development","termid":"GO:0072141"},{"relation_name":"part_of","term_name":"mesonephric interstitial fibroblast differentiation","termid":"GO:0061266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric interstitial fibroblast development","synonyms":[{"name":"mesonephros interstitial cell development","type":"exact"}],"termid":"GO:0061267"}


id: GO:0061222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesonephric mesenchymal cell population.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"},{"relation_name":"is_a","term_name":"kidney mesenchymal cell proliferation","termid":"GO:0072135"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchymal cell proliferation involved in mesonephros development","termid":"GO:0061222"}


id: GO:1990793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of substance P by a cell, in which the substance P acts as a neurotransmitter.","definition_xrefs":["PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"substance P secretion","termid":"GO:1990772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"substance P secretion, neurotransmission","termid":"GO:1990793"}


id: GO:0019695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonium ion metabolic process","termid":"GO:0097164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline metabolic process","synonyms":[{"name":"choline metabolism","type":"exact"}],"termid":"GO:0019695"}


id: GO:0032877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA endoreduplication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA endoreduplication","termid":"GO:0032875"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication","termid":"GO:2000105"},{"relation_name":"positively_regulates","term_name":"DNA endoreduplication","termid":"GO:0042023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"positive regulation of DNA endoreduplication","synonyms":[{"name":"activation of DNA endoreduplication","type":"narrow"},{"name":"positive regulation of DNA endoreplication","type":"exact"},{"name":"positive regulation of DNA re-duplication","type":"exact"},{"name":"stimulation of DNA endoreduplication","type":"narrow"},{"name":"up regulation of DNA endoreduplication","type":"exact"},{"name":"up-regulation of DNA endoreduplication","type":"exact"},{"name":"upregulation of DNA endoreduplication","type":"exact"}],"termid":"GO:0032877"}


id: PBO:0081765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 696","termid":"PBO:0081765"}


id: GO:0042096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-beta T cell receptor activity (obsolete GO:0042096)","synonyms":[{"name":"alpha-beta T cell receptor activity","type":"exact"}],"termid":"GO:0042096"}


id: GO:0008127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + O2 + quercetin = 2-(3,4-dihydroxybenzoyloxy)-4,6-dihydroxybenzoate + CO.","definition_xrefs":["EC:1.13.11.24","RHEA:15381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"quercetin 2,3-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0891","KEGG_REACTION:R02156","MetaCyc:QUERCETIN-23-DIOXYGENASE-RXN","Reactome:R-HSA-8953398"],"synonyms":[{"name":"flavonol 2,4-oxygenase activity","type":"related"},{"name":"quercetin:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"quercetinase activity","type":"related"}],"termid":"GO:0008127"}


id: PATO:0001476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased position","synonyms":[{"name":"low position","type":"related"}],"termid":"PATO:0001476"}


id: PBO:0050437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein L pseudogene 1","termid":"PBO:0050437"}


id: PBO:0050971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 9","termid":"PBO:0050971"}


id: PBO:0083159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the dubious ORF YBR056W-A","termid":"PBO:0083159"}


id: PBO:0091516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi1","termid":"PBO:0091516"}


id: GO:0035051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiocyte differentiation","synonyms":[{"name":"cardiac cell differentiation","type":"exact"},{"name":"heart cell differentiation","type":"exact"}],"termid":"GO:0035051"}


id: MOD:00639
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphate labeled with biotin-HPDP","synonyms":[{"name":"Thiophos-S-S-biotin","type":"related"},{"name":"thiophosphate labeled with biotin-HPDP","type":"related"}],"termid":"MOD:00639"}


id: PBO:0067564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 717, pseudogene","termid":"PBO:0067564"}


id: PBO:0046731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVX1 antisense RNA","termid":"PBO:0046731"}


id: PBO:0048315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 26","termid":"PBO:0048315"}


id: PBO:0043411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 8","termid":"PBO:0043411"}


id: GO:2001092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an arabinotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"arabinotriose transport","termid":"GO:2001092"}


id: PBO:0091636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm5","termid":"PBO:0091636"}


id: GO:0047367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin 3,3'-bissulfate + 3'-phosphoadenosine 5'-phosphosulfate = quercetin 3,3',7-trissulfate + adenosine 3',5'-bisphosphate.","definition_xrefs":["MetaCyc:2.8.2.28-RXN","EC:2.8.2.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"quercetin-3,3'-bissulfate 7-sulfotransferase activity","secondary_identifiers":["RHEA:21860"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3,3'-bissulfate 7-sulfotransferase activity","type":"related"},{"name":"7-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3,3'/3,4'-disulfate 7-sulfotransferase activity","type":"related"},{"name":"flavonol 7-sulfotransferase activity","type":"related"},{"name":"quercetin-3,3'-bissulphate 7-sulphotransferase activity","type":"exact"}],"termid":"GO:0047367"}


id: PBO:0077102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 9","termid":"PBO:0077102"}


id: PBO:0072157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 34","termid":"PBO:0072157"}


id: GO:0021737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the emboliform nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:jid","GOC:dgh","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"emboliform nucleus development","termid":"GO:0021737"}


id: PBO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase Set8 (predicted)","termid":"PBO:0001326"}


id: PBO:0041717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin","termid":"PBO:0041717"}


id: GO:0072298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of metanephric glomerulus development, the progression of the metanephric glomerulus over time from its initial formation until its mature state. The metanephric glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney, or metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metanephros development","termid":"GO:0001656"},{"relation_name":"is_a","term_name":"regulation of glomerulus development","termid":"GO:0090192"},{"relation_name":"regulates","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric glomerulus development","termid":"GO:0072298"}


id: PBO:0047162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 187 member B","termid":"PBO:0047162"}


id: PBO:0031511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_during_nitrogen_starvation","termid":"PBO:0031511"}


id: GO:0019360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide nucleotide from other compounds, including niacinamide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide metabolic process","termid":"GO:0006769"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nicotinamide nucleotide biosynthetic process from niacinamide","synonyms":[{"name":"nicotinamide nucleotide anabolism from niacinamide","type":"exact"},{"name":"nicotinamide nucleotide formation from niacinamide","type":"exact"},{"name":"nicotinamide nucleotide synthesis from niacinamide","type":"exact"}],"termid":"GO:0019360"}


id: PBO:0017049
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ste20 Homologous Kinase","termid":"PBO:0017049"}


id: PBO:0068665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 46, pseudogene","termid":"PBO:0068665"}


id: FYPO:0003219
data:
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id: MOD:01639
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id: PBO:0014592
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id: FYPO:0000987
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id: GO:0010210
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id: MOD:00811
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id: PBO:0061504
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id: GO:1902684
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id: GO:0005198
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id: GO:0008073
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107281],"is_not":false,"summary":null,"term":"GO:0008073"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ornithine decarboxylase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ornithine decarboxylase regulator activity","termid":"GO:0042979"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0140678","GO:0003674","GO:0004857"],"is_obsolete":false,"name":"ornithine decarboxylase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008073","terms_by_termid":{"GO:0008073":null}}


id: GO:0010044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aluminum ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to aluminum ion","synonyms":[{"name":"response to aluminium ion","type":"exact"},{"name":"response to aluminum","type":"exact"}],"termid":"GO:0010044"}


id: MOD:00184
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-3'-bromophenylalanine.","definition_xrefs":["PubMed:2076468","PubMed:9033387","RESID:AA0175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated L-phenylalanine","termid":"MOD:00972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3'-bromophenylalanine","synonyms":[{"name":"(S)-2-amino-3-(3-bromophenyl)propanoic acid","type":"exact"},{"name":"3'BrPhe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-3'-bromophenylalanine","type":"exact"},{"name":"bromination","type":"related"},{"name":"m-bromophenylalanine","type":"exact"},{"name":"meta-bromophenylalanine","type":"exact"}],"termid":"MOD:00184"}


id: GO:0061663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of NEDD8 to a substrate protein via the reaction X-NEDD8 + S = X + S-NEDD8, where X is either an E2 or E3 enzyme, the X-NEDD8 linkage is a thioester bond, and the S-NEDD8 linkage is an isopeptide bond between the C-terminal amino acid of NEDD8 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NEDD8 transferase activity","termid":"GO:0019788"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0140096","GO:0003674","GO:0003824","GO:0019787"],"is_obsolete":false,"name":"NEDD8 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061663"}


id: PBO:0000934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein (fungal and protazoan)","termid":"PBO:0000934"}


id: GO:0060583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the localization of an actin cortical patch. An actin cortical patch is a discrete actin-containing structure found just beneath the plasma membrane in fungal cells.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"actin cortical patch localization","termid":"GO:0051666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin cortical patch localization","synonyms":[{"name":"regulation of actin cortical patch localisation","type":"exact"}],"termid":"GO:0060583"}


id: GO:0021750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vestibular nucleus over time, from its formation to the mature structure.","definition_xrefs":["PMID:16221589","GOC:cls","GO_REF:0000021","GOC:curators","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular nucleus development","termid":"GO:0021750"}


id: PBO:0081706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 626","termid":"PBO:0081706"}


id: PBO:0030758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_miconazole","termid":"PBO:0030758"}


id: FYPO:0006657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which acid phosphatase activity is absent during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished acid phosphatase activity","termid":"FYPO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished acid phosphatase activity during cellular response to phosphate starvation","synonyms":[{"name":"acid phosphatase activity abolished during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006657"}


id: PBO:0050557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRas proto-oncogene, GTPase","termid":"PBO:0050557"}


id: PBO:0076166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 2","termid":"PBO:0076166"}


id: MOD:01554
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01554"}


id: PBO:0045246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC25-GNG10 readthrough","termid":"PBO:0045246"}


id: GO:0070026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nitric oxide (NO).","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nitric oxide binding","synonyms":[{"name":"NO binding","type":"exact"},{"name":"nitrogen monoxide binding","type":"exact"},{"name":"nitrosyl binding","type":"exact"}],"termid":"GO:0070026"}


id: GO:0060424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the foregut into the area in which the lung will develop.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"is_a","term_name":"foregut regionalization","termid":"GO:0060423"},{"relation_name":"part_of","term_name":"primary lung bud formation","termid":"GO:0060431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung field specification","synonyms":[{"name":"lung specification","type":"exact"}],"termid":"GO:0060424"}


id: PBO:0002535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex19 protein (predicted)","termid":"PBO:0002535"}


id: PBO:0069395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 655, pseudogene","termid":"PBO:0069395"}


id: SO:0000924
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a GC dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000924 insert_GC (obsolete SO:0000924)","synonyms":[{"name":"insert GC","type":"exact"}],"termid":"SO:0000924"}


id: PBO:0055621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3060","termid":"PBO:0055621"}


id: GO:0010672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb","PMID:12161753"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (obsolete GO:0010672)","synonyms":[{"name":"regulation of meiosis by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, meiotic","type":"exact"}],"termid":"GO:0010672"}


id: GO:1900990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of scopolamine.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete scopolamine catabolic process (obsolete GO:1900990)","synonyms":[{"name":"scopolamine breakdown","type":"exact"},{"name":"scopolamine catabolism","type":"exact"},{"name":"scopolamine degradation","type":"exact"}],"termid":"GO:1900990"}


id: PBO:0053506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 489","termid":"PBO:0053506"}


id: GO:0033346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-oxosuccinamate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-4002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine catabolic process","termid":"GO:0006530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"asparagine catabolic process via 2-oxosuccinamate","termid":"GO:0033346"}


id: FYPO:0004542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at subtelomeric regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at subtelomere","termid":"FYPO:0000169"},{"relation_name":"is_a","term_name":"increased gene silencing","termid":"FYPO:0000577"},{"relation_name":"is_a","term_name":"increased chromatin silencing","termid":"FYPO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased chromatin silencing at subtelomere","secondary_identifiers":["FYPO:0006367"],"synonyms":[{"name":"increased chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at subtelomere during vegetative growth","type":"exact"},{"name":"increased chromatin silencing at telomere","type":"related"}],"termid":"FYPO:0004542"}


id: PBO:0076464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAMALIN antisense RNA 1","termid":"PBO:0076464"}


id: GO:0043499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a eukaryotic cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete eukaryotic cell surface binding (obsolete GO:0043499)","synonyms":[{"name":"eukaryotic cell surface binding","type":"exact"}],"termid":"GO:0043499"}


id: GO:0052742
data:
  {"annotated_genes":["SJAG_00114","SJAG_00638","SJAG_05330","SJAG_04537","SJAG_01863","SJAG_01571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89338,107238,92832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004430"},{"annotations":[93728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016303"},{"annotations":[87969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052811"},{"annotations":[106101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000285"},{"annotations":[87970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016308"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a phosphatidylinositol = ADP + a phosphatidylinositol phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00638":null,"SJAG_01571":null,"SJAG_01863":null,"SJAG_04537":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1675773"],"synonyms":[{"name":"1-phosphatidylinositol kinase activity","type":"exact"}],"termid":"GO:0052742","terms_by_termid":{"GO:0000285":null,"GO:0004430":null,"GO:0016303":null,"GO:0016308":null,"GO:0052811":null}}


id: PBO:0045091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX2 divergent transcript","termid":"PBO:0045091"}


id: FYPO:0003724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-adenosyl)-hexaphosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased bis(5'-adenosyl)-hexaphosphatase activity","synonyms":[{"name":"reduced bis(5'-adenosyl)-hexaphosphatase activity","type":"exact"}],"termid":"FYPO:0003724"}


id: PBO:0054799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2212","termid":"PBO:0054799"}


id: GO:0072681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a thymocyte through distinct intrathymic niches (e.g. medulla, cortex), where it receives a unique set of developmental cues required for T-cell development, dependent on fibronectin in the extracellular matrix.","definition_xrefs":["CL:0000893","GOC:mah","GOC:BHF","PMID:20856819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-dependent thymocyte migration","termid":"GO:0072680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibronectin-dependent thymocyte migration","synonyms":[{"name":"fibronectin-dependent immature T cell migration","type":"related"},{"name":"fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"fibronectin-dependent immature T-cell migration","type":"related"},{"name":"fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:0072681"}


id: GO:0047696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + beta-adrenergic receptor = ADP + phospho-beta-adrenergic receptor.","definition_xrefs":["MetaCyc:BETA-ADRENERGIC-RECEPTOR-KINASE-RXN","EC:2.7.11.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0140096","GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"beta-adrenergic receptor kinase activity","secondary_identifiers":["Reactome:R-HSA-8851797","RHEA:19429","Reactome:R-HSA-8866268"],"synonyms":[{"name":"ADRBK1","type":"related"},{"name":"ATP:beta-adrenergic-receptor phosphotransferase activity","type":"broad"},{"name":"BARK1","type":"related"},{"name":"GRK2","type":"related"},{"name":"GRK3","type":"related"},{"name":"STK15","type":"related"},{"name":"[b-adrenergic-receptor] kinase activity","type":"related"},{"name":"adrenergic receptor kinase activity","type":"broad"},{"name":"beta-AR kinase activity","type":"related"},{"name":"beta-ARK","type":"related"},{"name":"beta-ARK 1","type":"related"},{"name":"beta-ARK 2","type":"related"},{"name":"beta-adrenergic receptor-specific kinase activity","type":"related"},{"name":"beta-adrenergic-receptor kinase (phosphorylating) activity","type":"related"},{"name":"beta-adrenergic-receptor kinase activity","type":"related"},{"name":"beta-adrenoceptor kinase 1 activity","type":"narrow"},{"name":"beta-adrenoceptor kinase 2 activity","type":"narrow"},{"name":"beta-adrenoceptor kinase activity","type":"related"},{"name":"beta-receptor kinase activity","type":"related"},{"name":"beta2ARK","type":"related"},{"name":"betaARK1","type":"related"}],"termid":"GO:0047696"}


id: PR:O74368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maintenance of mitochondrial morphology protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.01c","synonyms":[{"name":"Spom972h-mmm1","type":"exact"}],"termid":"PR:O74368"}


id: PBO:0072898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR-related CTD associated factor 4","termid":"PBO:0072898"}


id: PBO:0069791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1077, pseudogene","termid":"PBO:0069791"}


id: GO:0035585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals in which a cell uses calcium ions imported from an extracellular source to convert a signal into a response.","definition_xrefs":["GOC:BHF","PMID:20192754","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-mediated signaling using extracellular calcium source (obsolete GO:0035585)","synonyms":[{"name":"calcium signaling using extracellular calcium source","type":"exact"},{"name":"calcium signalling using extracellular calcium source","type":"exact"},{"name":"calcium-mediated signalling using extracellular calcium source","type":"exact"},{"name":"extracellular calcium influx","type":"narrow"}],"termid":"GO:0035585"}


id: PBO:0056053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like 3 pre-mRNA splicing factor","termid":"PBO:0056053"}


id: GO:0031408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any oxylipin, any of a group of biologically active compounds formed by oxidative metabolism of polyunsaturated fatty acids.","definition_xrefs":["PMID:11960741","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxylipin metabolic process","termid":"GO:0031407"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"oxylipin biosynthetic process","synonyms":[{"name":"oxylipin anabolism","type":"exact"},{"name":"oxylipin biosynthesis","type":"exact"},{"name":"oxylipin formation","type":"exact"},{"name":"oxylipin synthesis","type":"exact"}],"termid":"GO:0031408"}


id: FYPO:0001770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a tRNA methyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal tRNA methyltransferase activity","termid":"FYPO:0001770"}


id: PBO:0050385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 9","termid":"PBO:0050385"}


id: PBO:0004885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog Aah4","termid":"PBO:0004885"}


id: GO:0009498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial-type ferredoxin (obsolete GO:0009498)","synonyms":[{"name":"bacterial-type ferredoxin","type":"exact"}],"termid":"GO:0009498"}


id: PBO:0064850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 1","termid":"PBO:0064850"}


id: PBO:0111752
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1 repeat protein","termid":"PBO:0111752"}


id: PBO:0056080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member L","termid":"PBO:0056080"}


id: PBO:0067735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 34","termid":"PBO:0067735"}


id: PR:O74553
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-dihydrouridine synthase 4-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04755","PANTHER:PTHR11082:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.15","secondary_identifiers":["UniProtKB:O74553"],"synonyms":[{"name":"Spom972h-DUS4L","type":"exact"},{"name":"tRNA-dihydrouridine synthase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74553"}


id: PBO:0073397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain and mariner transposase fusion gene","termid":"PBO:0073397"}


id: PBO:0057108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 198","termid":"PBO:0057108"}


id: PBO:0017579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate/ 5'-adenylyl sulfate transmembrane transporter (predicted)","termid":"PBO:0017579"}


id: PBO:0005403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase (predicted)","termid":"PBO:0005403"}


id: GO:0036333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of hepatocytes within a population of cells. Hepatocytes are specialized epithelial cells of the liver that are organized into interconnected plates called lobules.","definition_xrefs":["CL:0000182","GOC:nhn","PMID:19878874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte homeostasis","termid":"GO:0036333"}


id: PBO:0050647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class A member 3, pseudogene","termid":"PBO:0050647"}


id: GO:0048193
data:
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id: GO:1903850
data:
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id: PBO:0044766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExD-box helicase 50","termid":"PBO:0044766"}


id: GO:0004148
data:
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id: PBO:0004449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pho85 family (predicted)","termid":"PBO:0004449"}


id: PBO:0034436
data:
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id: PR:Q9P377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bgs3 gene.","definition_xrefs":["UniProtKB:Q9P377","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase component bgs3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.03","synonyms":[{"name":"1,3-beta-D-glucan-UDP glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bgs3","type":"exact"}],"termid":"PR:Q9P377"}


id: GO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of a male germ cell, a reproductive cell in males.","definition_xrefs":["GOC:hjd","GOC:mtg_sensu","CL:0000015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell nucleus","termid":"GO:0043073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"male germ cell nucleus","secondary_identifiers":["GO:0043081"],"synonyms":[{"name":"male germ-cell nucleus","type":"exact"}],"termid":"GO:0001673"}


id: PBO:0049902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 3","termid":"PBO:0049902"}


id: GO:1990597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of IRE1 (inositol-requiring enzyme-1) bound to AIP1 (ASK1-interacting protein 1/DAB2-interacting protein).","definition_xrefs":["GOC:PARL","GOC:bf","PMID:18281285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"AIP1-IRE1 complex","synonyms":[{"name":"AIP1-ERN1 complex","type":"related"},{"name":"IRE1-DAB2IP complex","type":"exact"},{"name":"IRE1alpha-AIP1 complex","type":"narrow"}],"termid":"GO:1990597"}


id: GO:0140278
data:
  {"annotated_genes":["SJAG_05179","SJAG_03123","SJAG_04690","SJAG_03631","SJAG_01453","SJAG_04666","SJAG_03342","SJAG_00514","SJAG_03379","SJAG_04468","SJAG_01188","SJAG_05290","SJAG_03704","SJAG_04597","SJAG_02916","SJAG_00442","SJAG_01805","SJAG_02215","SJAG_01114","SJAG_03048","SJAG_04776","SJAG_05285","SJAG_02222"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95409,97050,98758,100765,102206,102222,103151,104724,109194],"is_not":false,"summary":null,"term":"GO:0140278"},{"annotations":[98494],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[102482,103153,101277,89931,109474,86025,85395,111568,113974,88540],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[83707,90545,88541],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[110490,102207],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[113975],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140279"},{"annotations":[111923],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"The assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following mitotic cytokinesis. The progeny cells that form a division septum are not able to exchange intracellular material.","definition_xrefs":["PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division septum assembly","termid":"GO:0000917"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01453":null,"SJAG_01805":null,"SJAG_02215":null,"SJAG_02222":null,"SJAG_02916":null,"SJAG_03048":null,"SJAG_03123":null,"SJAG_03342":null,"SJAG_03379":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04776":null,"SJAG_05179":null,"SJAG_05285":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"mitotic division septum assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140278","terms_by_termid":{"GO:0031671":null,"GO:0140278":null,"GO:0140279":null,"GO:0140281":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: PBO:0086619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086619"}


id: PBO:0058263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4641","termid":"PBO:0058263"}


id: PBO:0045730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E4F transcription factor 1","termid":"PBO:0045730"}


id: GO:1905430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18984164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to glycine","termid":"GO:1905429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glycine","synonyms":[{"name":"cellular response to Gly","type":"exact"},{"name":"cellular response to aminoacetic acid","type":"exact"},{"name":"cellular response to aminoethanoic acid","type":"exact"},{"name":"cellular response to glycin","type":"exact"}],"termid":"GO:1905430"}


id: GO:0097350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective elimination of senescent neutrophils from the body by autoregulatory mechanisms.","definition_xrefs":["PMID:21957127","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic cell clearance","termid":"GO:0043277"},{"relation_name":"part_of","term_name":"neutrophil homeostasis","termid":"GO:0001780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"neutrophil clearance","termid":"GO:0097350"}


id: PBO:0001225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein (predicted)","termid":"PBO:0001225"}


id: GO:0005611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3, beta1 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-6 complex","synonyms":[{"name":"laminin-311 complex","type":"exact"},{"name":"laminin-6A complex","type":"exact"}],"termid":"GO:0005611"}


id: PR:O74383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3H7.08c gene.","definition_xrefs":["UniProtKB:O74383","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.08c","synonyms":[{"name":"Spom972h-SPBC3H7.08c","type":"exact"}],"termid":"PR:O74383"}


id: PBO:0071116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 118","termid":"PBO:0071116"}


id: GO:0030172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to troponin C, the calcium-binding subunit of the troponin complex.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0008092","GO:0003674"],"is_obsolete":false,"name":"troponin C binding","termid":"GO:0030172"}


id: PBO:0017925
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thei gene was called cdc2L (cdc2 left) in PMID:16453669, name not added as potentially misleading","termid":"PBO:0017925"}


id: PBO:0084795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein involved in assembly of succinate dehydrogenase; has a role in maturation of the Sdh2p subunit; member of the LYR protein family; mutations in human ortholog SDHAF1 are associated with infantile leukoencephalopathy","termid":"PBO:0084795"}


id: GO:0100048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phosphatidylcholine biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylcholine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100048)","termid":"GO:0100048"}


id: PBO:0061013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nidogen 1","termid":"PBO:0061013"}


id: PBO:0110069
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as ortholog of human WDR54","termid":"PBO:0110069"}


id: FYPO:0001624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar asparagine level","synonyms":[{"name":"normal level of asparagine in vacuole","type":"exact"},{"name":"normal vacuolar L-asparagine level","type":"exact"},{"name":"normal vacuolar asparagine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001624"}


id: MOD:01954
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-selenocysteine residue to dehydroalanine.","definition_xrefs":["PubMed:1815586","PubMed:2914619","RESID:AA0181","PubMed:22031445","PubMed:1547888","PubMed:7947813","PubMed:8239649","ChEBI:17123","PubMed:21420488","PubMed:10220322","PubMed:20805503","PubMed:12781460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Sec)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:01954"}


id: GO:1900442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900743"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"}],"termid":"GO:1900442"}


id: PBO:0045169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 3","termid":"PBO:0045169"}


id: FYPO:0001389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleus localization is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal organelle localization","termid":"FYPO:0007913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal nucleus positioning","synonyms":[{"name":"normal nuclear localization","type":"exact"},{"name":"normal nuclear position","type":"exact"},{"name":"normal nucleus localisation","type":"exact"},{"name":"normal nucleus localization","type":"exact"},{"name":"normal nucleus localization during mitotic cell cycle","type":"related"},{"name":"normal nucleus localization during vegetative growth","type":"exact"}],"termid":"FYPO:0001389"}


id: PBO:0088887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein,TMEM14 superfamily member Aim19","termid":"PBO:0088887"}


id: GO:0036414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of peptidyl-arginine to form peptidyl-citrulline on a histone protein.","definition_xrefs":["PMID:22853951","PMID:23175390","GOC:als"],"gene_count":0,"genotype_count":0,"name":"obsolete histone citrullination (obsolete GO:0036414)","synonyms":[{"name":"histone deimination","type":"exact"}],"termid":"GO:0036414"}


id: PBO:0055735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomodin 1","termid":"PBO:0055735"}


id: PBO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 1","termid":"PBO:0052583"}


id: PR:000024856
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteolytic cleavage product that is derived from P-factor precursor. In Schizosaccharomyces pombe 972h- the sequence is SYADFLRVYQSWNTFANPDRPNL, corresponding to amino acids 32-54 of UniProtKB:Q09180-1.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"map2/Clv:P-factor-like1","pombase_gene_id":"SPCC1795.06","synonyms":[{"name":"PomBase_original_PRO_term_name: P-factor-like 1","type":"exact"},{"name":"map2/Clv:P-factor-like1","type":"exact"}],"termid":"PR:000024856"}


id: SO:0000982
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcription terminator that is not dependent upon Rho. Rather, the mRNA contains a sequence that allows it to base-pair with itself and make a stem-loop structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_terminator","termid":"SO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho_independent_bacterial_terminator","synonyms":[{"name":"rho independent bacterial terminator","type":"exact"}],"termid":"SO:0000982"}


id: GO:0008654
data:
  {"annotated_genes":["SJAG_05219","SJAG_01416","SJAG_04924","SJAG_01918","SJAG_04499","SJAG_01474","SJAG_00812","SJAG_01876","SJAG_03292","SJAG_02903","SJAG_04878","SJAG_02980","SJAG_03506","SJAG_03700","SJAG_04337","SJAG_02913","SJAG_00825","SJAG_03940","SJAG_01906","SJAG_01236","SJAG_04975","SJAG_02289","SJAG_02321","SJAG_00168","SJAG_03154","SJAG_02804","SJAG_02380","SJAG_01519","SJAG_01571","SJAG_04568","SJAG_02168","SJAG_02902","SJAG_04537","SJAG_00946","SJAG_04317","SJAG_00999","SJAG_03715","SJAG_00068","SJAG_01036","SJAG_01860","SJAG_03115","SJAG_02776","SJAG_02523","SJAG_06425","SJAG_04231","SJAG_03878","SJAG_04628","SJAG_00296","SJAG_04119","SJAG_03352","SJAG_04930","SJAG_04307","SJAG_00114","SJAG_02719","SJAG_00413","SJAG_03672","SJAG_02328","SJAG_01570","SJAG_04881","SJAG_04165","SJAG_05330","SJAG_01863","SJAG_01187","SJAG_00063","SJAG_03349","SJAG_03524","SJAG_01180","SJAG_04865","SJAG_00295","SJAG_01233","SJAG_05327","SJAG_01957","SJAG_00580","SJAG_04319","SJAG_04883","SJAG_03953","SJAG_00426","SJAG_00831","SJAG_01148","SJAG_03563","SJAG_06383","SJAG_05278","SJAG_03305","SJAG_01227","SJAG_04323","SJAG_03066","SJAG_00846","SJAG_02654","SJAG_03801","SJAG_03935","SJAG_04792","SJAG_02488","SJAG_04545"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69094,100982,106641,107097],"is_not":false,"summary":null,"term":"GO:0008654"},{"annotations":[83613,99830,110056,88351,87527],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[102307,113933,109130,89155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"},{"annotations":[108095,105393,60956,84970,111853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006657"},{"annotations":[110781,109131,99120,102308,115602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"},{"annotations":[97995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050992"},{"annotations":[113907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043048"},{"annotations":[92722,95713,107413,102632,94176,109858,90574,97996,105593,111007,84869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"},{"annotations":[95714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033384"},{"annotations":[105594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"},{"annotations":[70373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046474"},{"annotations":[107707,113327,84824,87358,94785,94991,92555,94238,102825,90642,108468,111316,110892,103657,89202,96345,89111,112242,89656,104694,85091,106038,99157,85706,97721,99893,96411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[97997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009240"},{"annotations":[111008,84870,92723,90575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[91865,86883,91381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[111577,107478],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[108854,105842],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0071072"},{"annotations":[90161,92060,106026,87312,89173,95863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006654"},{"annotations":[90781,103502,105394,92545,100450,89174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006656"},{"annotations":[84971,92546,100451,85541,110784,90782,100094,114538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006646"},{"annotations":[114889,88272,103399,88746,113104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006661"},{"annotations":[107236,114539,89336,87352,87967,92831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[61009,93726,62588,61236,83905,107272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[110785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a phospholipid, a lipid containing phosphoric acid as a mono- or diester.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic 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id: GO:0004755
data:
  {"annotated_genes":["SJAG_01061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105811],"is_not":false,"summary":null,"term":"GO:0004755"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-saccharopine + H2O + NADP+ = L-allysine + L-glutamate + H+ + NADPH.","definition_xrefs":["RHEA:10020","EC:1.5.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saccharopine dehydrogenase activity","termid":"GO:0004753"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"saccharopine dehydrogenase (NADP+, L-glutamate-forming) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN3O-127","KEGG_REACTION:R02315"],"synonyms":[{"name":"6-N-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-glutamate-forming)","type":"related"},{"name":"N6-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-glutamate-forming)","type":"related"},{"name":"aminoadipate semialdehyde-glutamate reductase activity","type":"related"},{"name":"aminoadipic semialdehyde-glutamate reductase activity","type":"related"},{"name":"aminoadipic semialdehyde-glutamic reductase activity","type":"related"},{"name":"epsilon-N-(L-glutaryl-2)-L-lysine:NAD+(P) oxidoreductase (L-2-aminoadipate-semialdehyde forming)","type":"related"},{"name":"saccharopine (nicotinamide adenine dinucleotide phosphate, glutamate-forming) dehydrogenase activity","type":"related"},{"name":"saccharopine reductase activity","type":"related"}],"termid":"GO:0004755","terms_by_termid":{"GO:0004755":null}}


id: PBO:0057773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2276","termid":"PBO:0057773"}


id: GO:0052485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the inflammatory response of a symbiont organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont inflammatory response (obsolete GO:0052485)","synonyms":[{"name":"negative regulation by organism of symbiont inflammatory response","type":"exact"}],"termid":"GO:0052485"}


id: PATO:0000534
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000534 p h sensitivity value (obsolete PATO:0000534)","termid":"PATO:0000534"}


id: PBO:0077590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein with metallophosphoesterase domain","termid":"PBO:0077590"}


id: PBO:0004419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U5","termid":"PBO:0004419"}


id: PBO:0049008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gephyrin","termid":"PBO:0049008"}


id: PBO:0049151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 8 (putative)","termid":"PBO:0049151"}


id: PBO:0088835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex small subunit","termid":"PBO:0088835"}


id: PATO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A displaced angular placement quality inhering in a body part by virtue of the bearer's movement closer the medial plane of the body.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced to","termid":"PATO:0002168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adduction","termid":"PATO:0002133"}


id: PBO:0048625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIPC PDZ domain containing family member 1","termid":"PBO:0048625"}


id: PR:O74798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2D10.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related trafficking adapter C2D10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.04","synonyms":[{"name":"Spom972h-SPBC2D10.04","type":"exact"}],"termid":"PR:O74798"}


id: GO:0040033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A post-transcriptional gene silencing pathway mediated by the action of small regulatory non-coding RNAs (sRNAs). sRNAs are 20-500 nucleotides in length and found in bacteria.","definition_xrefs":["PMID:33963446","PMID:12460531","PMID:2468565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"sRNA-mediated post-transcriptional gene silencing","synonyms":[{"name":"RNA-mediated gene silencing by inhibition of translation","type":"broad"},{"name":"downregulation of mRNA translation, ncRNA-mediated","type":"broad"},{"name":"inhibition of mRNA translation, ncRNA-mediated","type":"broad"},{"name":"sRNA-mediated gene silencing","type":"broad"},{"name":"small RNA-mediated gene silencing","type":"exact"}],"termid":"GO:0040033"}


id: PBO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 type B","termid":"PBO:0044303"}


id: PBO:0085853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; mtc3 is synthetically sick with cdc13-1","termid":"PBO:0085853"}


id: GO:0045605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"negative regulation of epidermis development","termid":"GO:0045683"},{"relation_name":"negatively_regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermal cell differentiation","synonyms":[{"name":"down regulation of epidermal cell differentiation","type":"exact"},{"name":"down-regulation of epidermal cell differentiation","type":"exact"},{"name":"downregulation of epidermal cell differentiation","type":"exact"},{"name":"inhibition of epidermal cell differentiation","type":"narrow"},{"name":"negative regulation of hypodermal cell differentiation","type":"related"}],"termid":"GO:0045605"}


id: GO:0015383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + bicarbonate(in) = sulfate(in) + bicarbonate(out).","definition_xrefs":["TC:2.A.53.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"bicarbonate transmembrane transporter activity","termid":"GO:0015106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sulfate:bicarbonate antiporter activity","synonyms":[{"name":"sulfate:hydrogencarbonate antiporter activity","type":"exact"},{"name":"sulphate:bicarbonate antiporter activity","type":"exact"}],"termid":"GO:0015383"}


id: PBO:0050469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA distal transcript antisense RNA","termid":"PBO:0050469"}


id: PBO:0090963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4 kinase plasma membrane scaffold Efr3","termid":"PBO:0090963"}


id: GO:0050677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of urothelial cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urothelial cell proliferation","termid":"GO:0050675"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"urothelial cell proliferation","termid":"GO:0050674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urothelial cell proliferation","synonyms":[{"name":"activation of urothelial cell proliferation","type":"narrow"},{"name":"stimulation of urothelial cell proliferation","type":"narrow"},{"name":"up regulation of urothelial cell proliferation","type":"exact"},{"name":"up-regulation of urothelial cell proliferation","type":"exact"},{"name":"upregulation of urothelial cell proliferation","type":"exact"}],"termid":"GO:0050677"}


id: GO:0042251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of an established polarized larval imaginal disc epithelium.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of larval imaginal disc epithelium","termid":"GO:0016336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"maintenance of polarity of larval imaginal disc epithelium","termid":"GO:0042251"}


id: PBO:0056811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 4B pseudogene 1","termid":"PBO:0056811"}


id: PBO:0077966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 18-2","termid":"PBO:0077966"}


id: PBO:0045482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DS cell adhesion molecule","termid":"PBO:0045482"}


id: GO:0005292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lysine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity lysine transmembrane transporter activity","synonyms":[{"name":"high affinity lysine transmembrane transporter activity","type":"exact"},{"name":"high affinity lysine transporter activity","type":"broad"}],"termid":"GO:0005292"}


id: PBO:0030172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_resolution_of_meiotic_recombination_intermediates_with_crossover_formation","termid":"PBO:0030172"}


id: PBO:0038867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase tRNA specific 1","termid":"PBO:0038867"}


id: PBO:0005563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh3 (predicted)","termid":"PBO:0005563"}


id: GO:0004888
data:
  {"annotated_genes":["SJAG_01978","SJAG_02258","SJAG_01345","SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990576"},{"annotations":[93182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[84318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"},{"annotations":[104557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140897"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction.","definition_xrefs":["Wikipedia:Transmembrane_receptor","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01699":null,"SJAG_01978":null,"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"transmembrane signaling receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0099600","GO:0004926","Reactome:R-HSA-193672"],"synonyms":[{"name":"transmembrane receptor activity","type":"broad"},{"name":"transmembrane signalling receptor activity","type":"exact"}],"termid":"GO:0004888","terms_by_termid":{"GO:0004932":null,"GO:0036320":null,"GO:0140897":null,"GO:1990576":null}}


id: GO:0097428
data:
  {"annotated_genes":["SJAG_03222","SJAG_02895","SJAG_02745","SJAG_02866","SJAG_01147","SJAG_02497","SJAG_03532","SJAG_00040","SJAG_04016","SJAG_03913","SJAG_03701","SJAG_01417","SJAG_02474"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96602,113939],"is_not":false,"summary":null,"term":"GO:0097428"},{"annotations":[97727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106034"},{"annotations":[100388,113109,91782,96150,83817,100868,105975,110869,85132,112221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106035"}]},"cv_name":"biological_process","definition":"The transfer of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.","definition_xrefs":["PMID:18322036","GOC:al","GOC:mah","PMID:11939799","PMID:21977977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00040":null,"SJAG_01147":null,"SJAG_01417":null,"SJAG_02474":null,"SJAG_02497":null,"SJAG_02745":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_03222":null,"SJAG_03532":null,"SJAG_03701":null,"SJAG_03913":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"protein maturation by iron-sulfur cluster transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097428","terms_by_termid":{"GO:0097428":null,"GO:0106034":null,"GO:0106035":null}}


id: PR:Q10107
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mra1 gene.","definition_xrefs":["UniProtKB:Q10107","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA small subunit methyltransferase mra1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.07c","synonyms":[{"name":"18S rRNA (pseudouridine-N1)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mra1","type":"exact"},{"name":"multicopy suppressor of ras1-deficiency protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10107"}


id: PBO:0080550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 9","termid":"PBO:0080550"}


id: GO:0003799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, fungal cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antifungal peptide activity (obsolete GO:0003799)","synonyms":[{"name":"antifungal peptide activity","type":"exact"}],"termid":"GO:0003799"}


id: SO:0001044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nuclear pseudogene of either coding or non-coding mitochondria derived sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear_mt_pseudogene","secondary_identifiers":["http://en.wikipedia.org/wiki/Numt"],"synonyms":[{"name":"NUMT","type":"exact"},{"name":"nuclear mitochondrial pseudogene","type":"exact"},{"name":"nuclear mt pseudogene","type":"exact"}],"termid":"SO:0001044"}


id: PBO:0054349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1742","termid":"PBO:0054349"}


id: PBO:0041674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule 2","termid":"PBO:0041674"}


id: PBO:0049741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit epsilon 1","termid":"PBO:0049741"}


id: GO:0016468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out). Found in eukaryotic mitochondria and chloroplasts and in bacteria.","definition_xrefs":["TC:3.A.2.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium-translocating F-type ATPase activity (obsolete GO:0016468)","synonyms":[{"name":"ATP synthase","type":"broad"},{"name":"sodium-translocating F-type ATPase activity","type":"exact"}],"termid":"GO:0016468"}


id: GO:0042105
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A T cell receptor complex in which the TCR heterodimer comprises alpha and beta chains, associated with the CD3 complex; recognizes a complex consisting of an antigen-derived peptide bound to a class I or class II MHC protein.","definition_xrefs":["GOC:mah","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell receptor complex","termid":"GO:0042101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha-beta T cell receptor complex","synonyms":[{"name":"alpha-beta T lymphocyte receptor complex","type":"exact"},{"name":"alpha-beta T-cell receptor complex","type":"exact"},{"name":"alpha-beta T-lymphocyte receptor complex","type":"exact"},{"name":"alpha-beta TCR complex","type":"exact"}],"termid":"GO:0042105"}


id: PBO:0018219
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siderophore TRansporter","termid":"PBO:0018219"}


id: GO:1904595
data:
  {"annotated_genes":["SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108072],"is_not":false,"summary":null,"term":"GO:1904595"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of termination of RNA polymerase II transcription.","definition_xrefs":["PMID:25417108","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of termination of DNA-templated transcription","termid":"GO:0060566"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription","termid":"GO:1904594"},{"relation_name":"positively_regulates","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"positive regulation of termination of RNA polymerase II transcription","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of RNA 3'-end formation by RNA polymerase II","type":"narrow"},{"name":"activation of RNA polymerase II transcription termination","type":"narrow"},{"name":"activation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"activation of termination of RNA polymerase II transcription","type":"narrow"},{"name":"activation of transcription termination from Pol II promoter","type":"narrow"},{"name":"activation of transcription termination from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"positive regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"positive regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"positive regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"positive regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"up regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"up regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"up regulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"up regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"up regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"up-regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"up-regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"up-regulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"up-regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"up-regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"upregulation of RNA polymerase II transcription termination","type":"exact"},{"name":"upregulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"upregulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"upregulation of transcription termination from Pol II promoter","type":"exact"},{"name":"upregulation of transcription termination from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904595","terms_by_termid":{"GO:1904595":null}}


id: PBO:0043356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clarin 2","termid":"PBO:0043356"}


id: GO:0106211
data:
  {"annotated_genes":["SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101298],"is_not":false,"summary":null,"term":"GO:0106211"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-diphospho-1D-myo-inositol 1,3,4,6-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + H+ + phosphate.","definition_xrefs":["PMID:29540476","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol diphosphate tetrakisphosphate diphosphatase activity","termid":"GO:0052840"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-5-diphosphate-1,3,4,6-tetrakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:59500"],"synonyms":[{"name":"5-PP-InsP4 activity","type":"exact"},{"name":"5-diphospho-myo-inositol 1,3,4,6-tetrakisphosphate diphosphatase activity","type":"exact"},{"name":"5-diphosphoinositol 1,3,4,6-tetrakisphosphate diphosphatase activity","type":"exact"}],"termid":"GO:0106211","terms_by_termid":{"GO:0106211":null}}


id: PBO:0061232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP9 nucleolar protein","termid":"PBO:0061232"}


id: PBO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor one Cft1 (predicted)","termid":"PBO:0003476"}


id: GO:1902570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a nucleolus.","definition_xrefs":["GOC:TermGenie","PMID:22809626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nucleolus","synonyms":[{"name":"protein localisation in nucleolus","type":"exact"},{"name":"protein localisation to nucleolus","type":"exact"},{"name":"protein localization in nucleolus","type":"exact"}],"termid":"GO:1902570"}


id: SO:0001888
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fusion where the deletion brings together transcription factor binding sites.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_fusion","termid":"SO:0001887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_fusion","synonyms":[{"name":"TFBS fusion ","type":"exact"},{"name":"transcription factor binding site fusion","type":"exact"}],"termid":"SO:0001888"}


id: PR:Q9P6P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01081","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE affecting a late Golgi compartment protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.05c","secondary_identifiers":["UniProtKB:Q9P6P1"],"synonyms":[{"name":"Spom972h-STX16","type":"exact"},{"name":"syntaxin tlg2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P1"}


id: FYPO:0007961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the spindle length decreases abruptly at anaphase onset.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000641","FYPO:0001985","FYPO:0000054","FYPO:0000337"],"is_obsolete":false,"name":"transient abrupt spindle length decrease at anaphase onset","termid":"FYPO:0007961"}


id: PBO:0078055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 45","termid":"PBO:0078055"}


id: GO:0004794
data:
  {"annotated_genes":["SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99902],"is_not":false,"summary":null,"term":"GO:0004794"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine = 2-oxobutanoate + NH4.","definition_xrefs":["EC:4.3.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"threonine deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THREDEHYD-RXN","RHEA:22108","UM-BBD_reactionID:r0433"],"synonyms":[{"name":"L-serine dehydratase activity","type":"related"},{"name":"L-threonine ammonia-lyase (2-oxobutanoate-forming)","type":"exact"},{"name":"L-threonine ammonia-lyase activity","type":"exact"},{"name":"L-threonine deaminase activity","type":"exact"},{"name":"L-threonine dehydratase activity","type":"exact"},{"name":"L-threonine hydro-lyase (deaminating) activity","type":"related"},{"name":"serine deaminase activity","type":"related"},{"name":"threonine ammonia-lyase activity","type":"broad"},{"name":"threonine dehydrase activity","type":"exact"},{"name":"threonine dehydratase activity","type":"broad"}],"termid":"GO:0004794","terms_by_termid":{"GO:0004794":null}}


id: GO:0020028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hemoglobin into a cell by receptor-mediated endocytosis.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endocytic hemoglobin import into cell","synonyms":[{"name":"endocytic hemoglobin import","type":"related"},{"name":"haemoglobin uptake","type":"exact"},{"name":"hemoglobin uptake","type":"exact"}],"termid":"GO:0020028"}


id: GO:0044539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a long-chain fatty acid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:jl","GOC:pm","PMID:22022213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transport","termid":"GO:0015909"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"is_a","term_name":"lipid import into cell","termid":"GO:0140354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"long-chain fatty acid import into cell","synonyms":[{"name":"long-chain fatty acid import","type":"related"},{"name":"long-chain fatty acid uptake","type":"exact"}],"termid":"GO:0044539"}


id: PBO:0080586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 11","termid":"PBO:0080586"}


id: PBO:0028638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiotic_spindle_absent_from_cell_during_meiosis_II","termid":"PBO:0028638"}


id: GO:2000237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"positive regulation of tRNA metabolic process","termid":"GO:1903328"},{"relation_name":"is_a","term_name":"regulation of tRNA processing","termid":"GO:2000235"},{"relation_name":"positively_regulates","term_name":"tRNA processing","termid":"GO:0008033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"positive regulation of tRNA processing","synonyms":[{"name":"positive regulation of tRNA maturation","type":"exact"}],"termid":"GO:2000237"}


id: GO:0007265
data:
  {"annotated_genes":["SJAG_02379","SJAG_00329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107470],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0046580"},{"annotations":[87297],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0046579"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Ras subfamily relays a signal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00329":null,"SJAG_02379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Ras protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ras mediated signal transduction","type":"exact"}],"termid":"GO:0007265","terms_by_termid":{"GO:0046579":null,"GO:0046580":null}}


id: GO:0140898
data:
  {"annotated_genes":["SJAG_03047","SJAG_00170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98526,105778],"is_not":false,"summary":null,"term":"GO:0140898"}]},"cv_name":"biological_process","definition":"A chromatin remodeling process in which CENP-A is removed from euchromatin regions to prevent neocentromere formation.","definition_xrefs":["PMID:27666591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_03047":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"CENP-A eviction from euchromatin","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140898","terms_by_termid":{"GO:0140898":null}}


id: PBO:0061400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide receptor 1","termid":"PBO:0061400"}


id: PBO:0070174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 88 pseudogene","termid":"PBO:0070174"}


id: PBO:0040579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAALC antisense RNA 1","termid":"PBO:0040579"}


id: GO:0033431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CGA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CGA codon-amino acid adaptor activity","synonyms":[{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033431"}


id: GO:0102687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + dihydrozeatin = H+ + dihydrozeatin-7-N-glucose + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose:dihydrozeatin 7-N-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4724"],"termid":"GO:0102687"}


id: PBO:0034290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_end_location","termid":"PBO:0034290"}


id: PBO:0069987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1282, pseudogene","termid":"PBO:0069987"}


id: GO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of male germ cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell proliferation","termid":"GO:0036093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ cell proliferation","termid":"GO:0002176"}


id: PBO:0044997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphanous related formin 3","termid":"PBO:0044997"}


id: GO:0046777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own amino acid residues (cis-autophosphorylation), or residues on an identical protein (trans-autophosphorylation).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein autophosphorylation","secondary_identifiers":["Wikipedia:Autophosphorylation"],"synonyms":[{"name":"protein amino acid autophosphorylation","type":"exact"}],"termid":"GO:0046777"}


id: PR:P87171
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prs5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.06c","synonyms":[{"name":"Spom972h-prs5","type":"exact"},{"name":"phosphoribosyl pyrophosphate synthase 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87171"}


id: PBO:0059771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 45","termid":"PBO:0059771"}


id: PBO:0047929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(q23.3)","termid":"PBO:0047929"}


id: FYPO:0008241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of free polyphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular polyphosphate level","termid":"FYPO:0008024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased free cellular polyphosphate level","termid":"FYPO:0008241"}


id: PBO:0003986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase, Arb family ABCF2-like (predicted)","termid":"PBO:0003986"}


id: GO:1990001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of an inactive cysteine-type endopeptidase involved in an apoptotic process.","definition_xrefs":["PMID:11943137","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043154"},{"relation_name":"is_a","term_name":"inhibition of cysteine-type endopeptidase activity","termid":"GO:0097340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"inhibition of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:1990001"}


id: PBO:0075950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 5 pseudogene","termid":"PBO:0075950"}


id: PBO:0082355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atypical protein kinase; along with its paralog, ALK1, required for proper spindle positioning and nuclear segregation following mitotic arrest, proper organization of cell polarity factors in mitosis, proper localization of formins and polarity factors, and survival in cells that activate spindle assembly checkpoint; negatively regulates the morphogenesis checkpoint in response to polarity insults in opposition to ALK1; phosphorylated in response to DNA damage; similar to mammalian haspins","termid":"PBO:0082355"}


id: GO:0046869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 2Fe-2S iron-sulfur cluster via tris-L-cysteinyl-L-aspartato diiron disulfide.","definition_xrefs":["RESID:AA0331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-aspartato diiron disulfide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-aspartato diiron disulphide","type":"exact"}],"termid":"GO:0046869"}


id: GO:0072444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic DNA replication checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"},{"relation_name":"is_a","term_name":"response to DNA replication checkpoint signaling","termid":"GO:0072438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic DNA replication checkpoint signaling","secondary_identifiers":["GO:0072447"],"synonyms":[{"name":"S-M checkpoint effector process","type":"exact"},{"name":"mitotic DNA replication checkpoint effector process","type":"exact"},{"name":"response to S-M checkpoint signaling","type":"exact"},{"name":"response to signal involved in S-M checkpoint","type":"exact"},{"name":"response to signal involved in mitotic DNA replication checkpoint","type":"exact"}],"termid":"GO:0072444"}


id: PBO:0056012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056012"}


id: GO:2001125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of translational frameshifting.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"regulation of translational frameshifting","termid":"GO:2001124"},{"relation_name":"negatively_regulates","term_name":"translational frameshifting","termid":"GO:0006452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational frameshifting","termid":"GO:2001125"}


id: GO:0070212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of multiple ADP-ribose residues from NAD to a protein amino acid, forming a poly(ADP-ribose) chain.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl","PMID:25043379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein poly-ADP-ribosylation","synonyms":[{"name":"addition of poly-ADP-ribose to protein","type":"exact"},{"name":"poly(ADP-ribose) addition to protein","type":"exact"},{"name":"protein amino acid poly-ADP-ribosylation","type":"exact"},{"name":"protein poly(ADP-ribose) metabolism","type":"related"},{"name":"protein poly(ADP-ribose) synthesis","type":"exact"}],"termid":"GO:0070212"}


id: GO:0010322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of isopentenyl diphosphate produced via the methylerythritol (MEP) pathway (mevalonate-independent).","definition_xrefs":["PMID:16531478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","termid":"GO:0019288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","synonyms":[{"name":"regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"}],"termid":"GO:0010322"}


id: PBO:0069161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 413, pseudogene","termid":"PBO:0069161"}


id: GO:0050053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 2,6-beta-D-fructosyl(n) = glucose + 2,6-beta-D-fructosyl(n+1).","definition_xrefs":["EC:2.4.1.10","MetaCyc:LEVANSUCRASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"levansucrase activity","secondary_identifiers":["RHEA:13653"],"synonyms":[{"name":"beta-2,6-fructan:D-glucose 1-fructosyltransferase activity","type":"related"},{"name":"beta-2,6-fructosyltransferase activity","type":"related"},{"name":"sucrose 6-fructosyl transferase activity","type":"related"},{"name":"sucrose 6-fructosyltransferase activity","type":"related"},{"name":"sucrose:2,6-beta-D-fructan 6-beta-D-fructosyltransferase activity","type":"related"}],"termid":"GO:0050053"}


id: GO:0019326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrotoluene, any methylbenzene molecule with NO2 group(s) attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrotoluene metabolic process","synonyms":[{"name":"nitrotoluene metabolism","type":"exact"}],"termid":"GO:0019326"}


id: PBO:0031388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_phenylalanine","termid":"PBO:0031388"}


id: PBO:0054877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2291","termid":"PBO:0054877"}


id: PBO:0082338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP (CTP):tRNA-specific tRNA nucleotidyltransferase; different forms targeted to the nucleus, cytosol, and mitochondrion are generated via the use of multiple transcriptional and translational start sites; human homolog TRNT1 complements yeast null mutant","termid":"PBO:0082338"}


id: GO:0002713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte mediated immunity","termid":"GO:0002707"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"negatively_regulates","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell mediated immunity","synonyms":[{"name":"down regulation of B cell mediated immunity","type":"exact"},{"name":"down-regulation of B cell mediated immunity","type":"exact"},{"name":"downregulation of B cell mediated immunity","type":"exact"},{"name":"inhibition of B cell mediated immunity","type":"narrow"},{"name":"negative regulation of B lymphocyte mediated immunity","type":"exact"},{"name":"negative regulation of B-cell mediated immunity","type":"exact"},{"name":"negative regulation of B-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002713"}


id: PBO:0071834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 29","termid":"PBO:0071834"}


id: GO:0021790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the branchial arch mesenchyme is directed to a specific target site in the branchial arch mesenchyme in response to a repulsive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:dph","GOC:dgh","PMID:14699587","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in branchial arch mesenchyme","termid":"GO:0021789"},{"relation_name":"is_a","term_name":"chemorepulsion of branchiomotor axon","termid":"GO:0021793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of branchiomotor neuron axon in branchial arch mesenchyme","synonyms":[{"name":"negative chemotaxis of branchiomotor neuron axon in branchial arch mesenchyme","type":"exact"}],"termid":"GO:0021790"}


id: FYPO:0002932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature snoRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered snoRNA or precursor level","termid":"FYPO:0005998"},{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased mature snoRNA level","synonyms":[{"name":"decreased mature small nucleolar RNA level","type":"exact"},{"name":"decreased mature snoRNA accumulation","type":"related"},{"name":"decreased mature snoRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature snoRNA level during vegetative growth","type":"exact"},{"name":"decreased mature snoRNA transcript level","type":"broad"},{"name":"decreased snoRNA level","type":"broad"},{"name":"reduced mature snoRNA level","type":"exact"}],"termid":"FYPO:0002932"}


id: GO:0072156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a distal tubule are generated and organized. The distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tubule morphogenesis","termid":"GO:0072156"}


id: GO:0075521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, towards the host cell nucleus using host microtubules.","definition_xrefs":["UniProtKB-KW:KW-1177","VZ:983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-dependent intracellular transport of viral material","termid":"GO:0075519"},{"relation_name":"is_a","term_name":"transport of viral material towards nucleus","termid":"GO:0075606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule-dependent intracellular transport of viral material towards nucleus","synonyms":[{"name":"microtubule-dependent intracellular transport of viral material to nucleus","type":"exact"}],"termid":"GO:0075521"}


id: PBO:0053458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 411","termid":"PBO:0053458"}


id: PBO:0068854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 92, pseudogene","termid":"PBO:0068854"}


id: PBO:0043936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB regulated transcription coactivator 1","termid":"PBO:0043936"}


id: PBO:0067604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 769, pseudogene","termid":"PBO:0067604"}


id: PBO:0027407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nonsense-mediated_decay","termid":"PBO:0027407"}


id: SO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A centromere DNA Element II (CDEII) is part a conserved region of the centromere, consisting of a consensus region that is AT-rich and ~ 75-100 bp in length.","definition_xrefs":["PMID:11222754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"point_centromere","termid":"SO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere_DNA_Element_II","synonyms":[{"name":"CDEII","type":"exact"},{"name":"centromere DNA Element II","type":"exact"}],"termid":"SO:0001494"}


id: GO:1904771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a doxorubicin stimulus.","definition_xrefs":["PMID:19801496","GOC:TermGenie","GO_REF:0000071"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to doxorubicin (obsolete GO:1904771)","termid":"GO:1904771"}


id: PBO:0039376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomotin like 1","termid":"PBO:0039376"}


id: GO:0097323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a B cell to another cell via adhesion molecules.","definition_xrefs":["GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"B cell adhesion","termid":"GO:0097323"}


id: PBO:0081668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 589","termid":"PBO:0081668"}


id: GO:0045324
data:
  {"annotated_genes":["SJAG_03783","SJAG_04070","SJAG_07012","SJAG_05207","SJAG_01981","SJAG_02349","SJAG_04643","SJAG_03756","SJAG_04349","SJAG_01586","SJAG_01527","SJAG_00900","SJAG_00380","SJAG_04047","SJAG_05303","SJAG_02584","SJAG_16459","SJAG_04024","SJAG_02315","SJAG_03892","SJAG_02234","SJAG_04552","SJAG_03403","SJAG_01281","SJAG_01242","SJAG_04936","SJAG_04822","SJAG_04912","SJAG_00821","SJAG_01598","SJAG_03005","SJAG_01876","SJAG_03511","SJAG_00777","SJAG_02912","SJAG_03250","SJAG_04023","SJAG_04489","SJAG_02117","SJAG_05245","SJAG_04966","SJAG_00204","SJAG_01229","SJAG_00416","SJAG_02049","SJAG_00301"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84129,84299,86332,87631,87763,88126,88743,92096,92679,94092,96372,96431,97007,97237,98102,98250,100162,101071,101812,102667,102842,103737,105102,105903,105918,106750,106999,107571,113000,114506],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[99260,84784,87764,100242,94988,103233,99849,106320,108680,94811,110981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[84300,92098,87632,105486,103479,112497,88127,101072,94094,97009,102669,105904,87765,88411,84131,106751,110814,86703,107572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances from late endosomes to the vacuole. In yeast, after transport to the prevacuolar compartment, endocytic content is delivered to the late endosome and on to the vacuole. This pathway is analogous to endosome to lysosome transport.","definition_xrefs":["PMID:11872141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_00301":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00777":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01598":null,"SJAG_01876":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02315":null,"SJAG_02349":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03250":null,"SJAG_03403":null,"SJAG_03511":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_05207":null,"SJAG_05245":null,"SJAG_05303":null,"SJAG_07012":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"late endosome to vacuole transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045324","terms_by_termid":{"GO:0032511":null,"GO:0043328":null,"GO:0045324":null}}


id: FYPO:0006915
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[115373,115376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a cell cycle process normally (i.e. indistinguishably from wild type). A cell cycle process is any of the processes that form part of the cell cycle, and thereby ensures successive accurate and complete genome replication and chromosome segregation.","definition_xrefs":["PomBase:mah","GO:0022402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle","termid":"FYPO:0003832"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null,"SJAG_04883":null},"genotype_count":3,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle process","references_by_uniquename":{"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04883","SJAG_01355","SJAG_00601"],"single_locus_genotype_uniquenames":["rip1delta","ptp4delta","cox6delta"],"termid":"FYPO:0006915","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000590":null,"FYPO:0001007":null}}


id: SO:0001679
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region that is involved in the control of the process of transcription.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001679 transcription_regulatory_region (obsolete SO:0001679)","synonyms":[{"name":"transcription regulatory region","type":"exact"}],"termid":"SO:0001679"}


id: GO:0009897
data:
  {"annotated_genes":["SJAG_00340","SJAG_04789","SJAG_01029","SJAG_01835","SJAG_00784","SJAG_04209","SJAG_03204","SJAG_02916","SJAG_04238","SJAG_01086","SJAG_03640","SJAG_00096","SJAG_04875","SJAG_00254","SJAG_01290","SJAG_04850","SJAG_02435","SJAG_05272","SJAG_00310","SJAG_04851","SJAG_02260","SJAG_00109","SJAG_00415","SJAG_02093","SJAG_04685","SJAG_02173"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86077,86271,87707,88004,90178,90965,90977,90978,90979,91405,96928,98360,98367,98368,100115,102662,103886,109146,109850,110480,110580,110859,111697,112378,113429,113860,114406,114839],"is_not":false,"summary":null,"term":"GO:0009897"}]},"cv_name":"cellular_component","definition":"The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"cell surface","termid":"GO:0009986"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00415":null,"SJAG_00784":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_02093":null,"SJAG_02173":null,"SJAG_02260":null,"SJAG_02435":null,"SJAG_02916":null,"SJAG_03204":null,"SJAG_03640":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04685":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04875":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0005886","GO:0009986","GO:0005575"],"is_obsolete":false,"name":"external side of plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"external leaflet of plasma membrane","type":"exact"},{"name":"juxtamembrane","type":"broad"},{"name":"outer surface of cytoplasmic membrane","type":"exact"}],"termid":"GO:0009897","terms_by_termid":{"GO:0009897":null}}


id: GO:1900978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tatiopterin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphorus metabolic process","termid":"GO:0010563"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of tatiopterin metabolic process","termid":"GO:1900977"},{"relation_name":"negatively_regulates","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tatiopterin metabolic process","synonyms":[{"name":"down regulation of tatiopterin metabolic process","type":"exact"},{"name":"down regulation of tatiopterin metabolism","type":"exact"},{"name":"down-regulation of tatiopterin metabolic process","type":"exact"},{"name":"down-regulation of tatiopterin metabolism","type":"exact"},{"name":"downregulation of tatiopterin metabolic process","type":"exact"},{"name":"downregulation of tatiopterin metabolism","type":"exact"},{"name":"inhibition of tatiopterin metabolic process","type":"narrow"},{"name":"inhibition of tatiopterin metabolism","type":"exact"},{"name":"negative regulation of tatiopterin metabolism","type":"exact"}],"termid":"GO:1900978"}


id: PBO:0036054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_O-linked_glycosylation_during_vegetative_growth","termid":"PBO:0036054"}


id: GO:0008340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways that regulate the duration of the adult phase of the life-cycle of an animal.","definition_xrefs":["PMID:25561524","PMID:273723695","PMID:3424805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of adult lifespan","termid":"GO:0008340"}


id: PBO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit 2-like Tca17 (predicted)","termid":"PBO:0033818"}


id: PBO:0082591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-Golgi t-SNARE syntaxin; required for vesicular transport between the ER and the Golgi complex; binds at least 9 SNARE proteins; plays a role in autophagy by regulating formation of autophagic vesicles in Golgi","termid":"PBO:0082591"}


id: PBO:0028622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2-type_prespliceosome_assembly","termid":"PBO:0028622"}


id: GO:1904112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of plus-end directed microfilament motor activity.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000059","PMID:25717181"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of plus-end directed microfilament motor activity (obsolete GO:1904112)","synonyms":[{"name":"activation of barbed-end directed actin-filament motor activity","type":"narrow"},{"name":"activation of plus-end directed actin filament motor activity","type":"related"},{"name":"activation of plus-end directed actin-filament motor activity","type":"narrow"},{"name":"activation of plus-end directed microfilament motor activity","type":"narrow"},{"name":"positive regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"positive regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"positive regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"up regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"up-regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"up-regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"up-regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up-regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"upregulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"upregulation of plus-end directed actin filament motor activity","type":"related"},{"name":"upregulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"upregulation of plus-end directed microfilament motor activity","type":"exact"}],"termid":"GO:1904112"}


id: PBO:0070879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 11","termid":"PBO:0070879"}


id: PBO:0060192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC12 antisense RNA 1","termid":"PBO:0060192"}


id: PBO:0108888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 1","termid":"PBO:0108888"}


id: SO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recoding by frameshifting a particular site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded","termid":"SO:0000881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally_frameshifted","synonyms":[{"name":"translationally frameshifted","type":"exact"}],"termid":"SO:0000887"}


id: PBO:0069951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1244, pseudogene","termid":"PBO:0069951"}


id: GO:0005280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + H+(out) = amino acid(in) + H+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:monoatomic cation symporter activity","termid":"GO:0005416"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"amino acid:proton symporter activity","secondary_identifiers":["Reactome:R-HSA-8875623"],"synonyms":[{"name":"cation/amino acid symporter","type":"broad"},{"name":"hydrogen:amino acid symporter activity","type":"exact"}],"termid":"GO:0005280"}


id: PBO:0045622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 34 (pseudogene)","termid":"PBO:0045622"}


id: PR:Q10486
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17C9.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17C9.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.15c","synonyms":[{"name":"Spom972h-SPAC17C9.15c","type":"exact"}],"termid":"PR:Q10486"}


id: PBO:0052454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 5","termid":"PBO:0052454"}


id: PBO:0053697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 898","termid":"PBO:0053697"}


id: PBO:0089292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a","termid":"PBO:0089292"}


id: GO:0043052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to a temperature gradient. Movement may be towards either a higher or lower temperature.","definition_xrefs":["WB_REF:cgc467","GOC:cab1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermotaxis","secondary_identifiers":["Wikipedia:Thermotaxis"],"synonyms":[{"name":"taxis in response to temperature stimulus","type":"exact"}],"termid":"GO:0043052"}


id: PBO:0061112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 3 pseudogene 1","termid":"PBO:0061112"}


id: GO:0008266
data:
  {"annotated_genes":["SJAG_04427","SJAG_01327","SJAG_04271","SJAG_04880","SJAG_03460","SJAG_02469","SJAG_05240","SJAG_03954","SJAG_03214","SJAG_00145","SJAG_01222","SJAG_03283","SJAG_03876","SJAG_01650"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71886,73703,85642,91290,91762,91961,93249,94645,102447,103836,106047,108998,111044,112518],"is_not":false,"summary":null,"term":"GO:0008266"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of uracil residues in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-pyrimidine tract binding","termid":"GO:0008187"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_01222":null,"SJAG_01327":null,"SJAG_01650":null,"SJAG_02469":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03460":null,"SJAG_03876":null,"SJAG_03954":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04880":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"poly(U) RNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(U) binding","type":"exact"}],"termid":"GO:0008266","terms_by_termid":{"GO:0008266":null}}


id: PBO:0059384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 9","termid":"PBO:0059384"}


id: GO:2000350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling via the CD40 signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of CD40 signaling pathway","termid":"GO:2000348"},{"relation_name":"positively_regulates","term_name":"CD40 signaling pathway","termid":"GO:0023035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of CD40 signaling pathway","synonyms":[{"name":"positive regulation of CD40 signalling pathway","type":"exact"}],"termid":"GO:2000350"}


id: FYPO:0007994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cohesion protection during anaphase of the first meiotic nuclear division is normal.","definition_xrefs":["PMID:18716626","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic sister chromatid cohesion","termid":"FYPO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic sister chromatid cohesion protection during meiotic anaphase I","termid":"FYPO:0007994"}


id: PBO:0046114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1 pseudogene 1","termid":"PBO:0046114"}


id: PBO:0089286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase Hem15","termid":"PBO:0089286"}


id: PBO:0055758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA p53 regulated and ESC associated 2","termid":"PBO:0055758"}


id: FYPO:0006812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the RNA polymerase II core complex is lower than normal.","definition_xrefs":["PMID:10503538","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level in RNA polymerase II core complex","synonyms":[{"name":"decreased RNA polymerase II core complex protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in RNA polymerase II complex","type":"broad"},{"name":"decreased protein level in RNA polymerase II core complex during mitotic cell cycle","type":"related"},{"name":"decreased protein level in RNA polymerase II core complex during vegetative growth","type":"exact"},{"name":"decreased protein level in RNAP II core complex","type":"exact"},{"name":"reduced protein level in RNA polymerase II core complex","type":"exact"}],"termid":"FYPO:0006812"}


id: GO:0033910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in amylaceous polysaccharides, to remove successive maltotetraose residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltotetraohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.60-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan maltotetraohydrolase activity","type":"related"},{"name":"G4-amylase activity","type":"related"},{"name":"exo-maltotetraohydrolase activity","type":"related"},{"name":"glucan 1,4-alpha-maltotetrahydrolase activity","type":"related"},{"name":"maltotetraose-forming amylase activity","type":"related"}],"termid":"GO:0033910"}


id: GO:0005028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete CD40 receptor activity (obsolete GO:0005028)","synonyms":[{"name":"CD40 receptor activity","type":"exact"}],"termid":"GO:0005028"}


id: MOD:01380
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tryptophan residue by a thioether bond to form 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide.","definition_xrefs":["PubMed:11805306","PubMed:4865716","RESID:AA0451","PubMed:18552824","PubMed:363352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide","synonyms":[{"name":"2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide","type":"exact"},{"name":"2-((2R)-2-amino-2carboxyethyl)sulfinyl-3-((2S)-2-amino-2-carboxyethyl)-1H-indole","type":"exact"},{"name":"6'-hydroxy-S-oxo-tryptathionine","type":"exact"},{"name":"CROSSLNK 2'-cysteinyl-6'-hydroxytryptophan sulfoxide (Trp-Cys)","type":"exact"}],"termid":"MOD:01380"}


id: GO:0047873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl phosphate + H2O = dolichol + phosphate.","definition_xrefs":["EC:3.1.3.51","MetaCyc:DOLICHYL-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dolichyl-phosphatase activity","secondary_identifiers":["RHEA:13797"],"synonyms":[{"name":"Dol-P phosphatase activity","type":"related"},{"name":"Dol-P-P phosphohydrolase activity","type":"exact"},{"name":"dolichol monophosphatase activity","type":"related"},{"name":"dolichol phosphatase activity","type":"related"},{"name":"dolichol phosphate phosphatase activity","type":"related"},{"name":"dolichyl monophosphate phosphatase activity","type":"related"},{"name":"dolichyl phosphate phosphatase activity","type":"related"},{"name":"dolichyl pyrophosphate phosphatase activity","type":"exact"},{"name":"dolichyl-phosphate phosphohydrolase activity","type":"related"},{"name":"polyisoprenyl phosphate phosphatase activity","type":"related"},{"name":"polyprenylphosphate phosphatase activity","type":"related"}],"termid":"GO:0047873"}


id: GO:0042708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of elastin.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete elastase activity (obsolete GO:0042708)","synonyms":[{"name":"elastase activity","type":"exact"}],"termid":"GO:0042708"}


id: PBO:0056347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 5","termid":"PBO:0056347"}


id: PBO:0091576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein adenylyltransferase SelO","termid":"PBO:0091576"}


id: GO:0006531
data:
  {"annotated_genes":["SJAG_03306","SJAG_00714","SJAG_00881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102090],"is_not":false,"summary":null,"term":"GO:0006531"},{"annotations":[107923,84019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[107924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_00881":null,"SJAG_03306":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aspartate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aspartate metabolism","type":"exact"}],"termid":"GO:0006531","terms_by_termid":{"GO:0006531":null,"GO:0006532":null,"GO:0006533":null}}


id: PBO:0059162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin phosphatase Rho interacting protein pseudogene 1","termid":"PBO:0059162"}


id: PBO:0113288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Processivity factor; required for ubiquitination activity of anaphase promoting complex (APC), mediates the activity of APC by contributing to substrate recognition; involved in cyclin proteolysis; contains conserved DOC1 homology domain","termid":"PBO:0113288"}


id: PBO:0045737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBAG9 pseudogene 1","termid":"PBO:0045737"}


id: PBO:0068634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 14, pseudogene","termid":"PBO:0068634"}


id: PBO:0088467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl pyrophosphate Man7GlcNAc2 alpha-1,6-mannosyltransferase Alg12","termid":"PBO:0088467"}


id: GO:0120176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the torso signaling pathway.","definition_xrefs":["PMID:23732470","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of torso signaling pathway","termid":"GO:0120175"},{"relation_name":"positively_regulates","term_name":"torso signaling pathway","termid":"GO:0008293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of torso signaling pathway","termid":"GO:0120176"}


id: PATO:0000290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000290 absolute respiratory rate (obsolete PATO:0000290)","termid":"PATO:0000290"}


id: PBO:0075436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member N1","termid":"PBO:0075436"}


id: PBO:0113135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General amino acid permease; involved in uptake of all L-amino acids, some D-amino acids, related compounds, toxic analogs and polyamines; regulated by nitrogen source; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; essential for invasive growth","termid":"PBO:0113135"}


id: PBO:0081031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11C","termid":"PBO:0081031"}


id: GO:0015748
data:
  {"annotated_genes":["SJAG_01945","SJAG_03741","SJAG_03746","SJAG_03503","SJAG_03172","SJAG_00018","SJAG_02957","SJAG_06440","SJAG_02114","SJAG_00587","SJAG_02516","SJAG_03851","SJAG_01731","SJAG_00576","SJAG_04406","SJAG_03721","SJAG_05209","SJAG_01470","SJAG_00669","SJAG_00276","SJAG_03710","SJAG_01229","SJAG_04325","SJAG_05268","SJAG_00154","SJAG_04370","SJAG_01116","SJAG_02943","SJAG_01225","SJAG_02132","SJAG_03644","SJAG_00230","SJAG_01305","SJAG_16459","SJAG_00760","SJAG_00612","SJAG_03416","SJAG_03338","SJAG_03334","SJAG_03452","SJAG_04328","SJAG_00835","SJAG_01960","SJAG_00589","SJAG_02897","SJAG_02581","SJAG_03050","SJAG_01095","SJAG_02050","SJAG_00232","SJAG_05325"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[107002,98973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[67880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[107003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[61276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035350"},{"annotations":[98706,98707,98708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001407"},{"annotations":[111252,63297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[97397,112352,103630,85383,93683,102841,103759,94757,87047,101945,104760,105638,100161,93622,96640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[97471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[107004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[107005,98974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[86975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[103672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[89021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[99761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[61275,107006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901679"},{"annotations":[108368,89456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"},{"annotations":[86669,94062,86670,95591,86663,105624,98336,108604,86665,86664,86671,86667,98459,101178,96308,90554,86666,86668,97399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[64484,60637,93684,103133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015914"},{"annotations":[92755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[95419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"},{"annotations":[108369,89224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035436"}]},"cv_name":"biological_process","definition":"The directed movement of organophosphate esters into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organophosphate esters are small organic molecules containing phosphate ester bonds.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00154":null,"SJAG_00230":null,"SJAG_00232":null,"SJAG_00276":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00612":null,"SJAG_00669":null,"SJAG_00760":null,"SJAG_00835":null,"SJAG_01095":null,"SJAG_01116":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03334":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_03644":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04325":null,"SJAG_04328":null,"SJAG_04370":null,"SJAG_04406":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_05325":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"organophosphate ester transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015748","terms_by_termid":{"GO:0001407":null,"GO:0015866":null,"GO:0015867":null,"GO:0015914":null,"GO:0017121":null,"GO:0035348":null,"GO:0035350":null,"GO:0035436":null,"GO:0045332":null,"GO:0120010":null,"GO:0140021":null,"GO:0140331":null,"GO:1901679":null,"GO:1903790":null,"GO:1990519":null,"GO:1990536":null,"GO:1990544":null,"GO:1990545":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: PBO:0110827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type, Toe1","termid":"PBO:0110827"}


id: PBO:0044482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 26 subfamily B member 1","termid":"PBO:0044482"}


id: GO:1904007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipase D activity.","definition_xrefs":["PMID:11211872","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipase activity","termid":"GO:0010518"},{"relation_name":"is_a","term_name":"regulation of phospholipase D activity","termid":"GO:1904005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipase D activity","synonyms":[{"name":"activation of choline phosphatase activity","type":"narrow"},{"name":"activation of lecithinase D activity","type":"narrow"},{"name":"activation of lipophosphodiesterase II activity","type":"narrow"},{"name":"activation of phosphatidylcholine phosphatidohydrolase activity","type":"narrow"},{"name":"activation of phospholipase D activity","type":"narrow"},{"name":"positive regulation of choline phosphatase activity","type":"exact"},{"name":"positive regulation of lecithinase D activity","type":"exact"},{"name":"positive regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"positive regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up regulation of choline phosphatase activity","type":"exact"},{"name":"up regulation of lecithinase D activity","type":"exact"},{"name":"up regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"up regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up regulation of phospholipase D activity","type":"exact"},{"name":"up-regulation of choline phosphatase activity","type":"exact"},{"name":"up-regulation of lecithinase D activity","type":"exact"},{"name":"up-regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"up-regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up-regulation of phospholipase D activity","type":"exact"},{"name":"upregulation of choline phosphatase activity","type":"exact"},{"name":"upregulation of lecithinase D activity","type":"exact"},{"name":"upregulation of lipophosphodiesterase II activity","type":"exact"},{"name":"upregulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"upregulation of phospholipase D activity","type":"exact"}],"termid":"GO:1904007"}


id: GO:0035195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A post-transcriptional gene silencing pathway in which regulatory microRNAs (miRNAs) elicit silencing of specific target genes. miRNAs are endogenous 21-24 nucleotide small RNAs processed from stem-loop RNA precursors (pre-miRNAs). Once incorporated into a RNA-induced silencing complex (RISC), miRNAs can downregulate protein production by either of two posttranscriptional mechanisms: endonucleolytic cleavage of the RNA (often mRNA) or mRNA translational repression, usually accompanied by poly-A tail shortening and subsequent degradation of the mRNA. miRNAs are present in all the animals and in plants, whereas siRNAs are present in lower animals and in plants.","definition_xrefs":["GOC:rl","GOC:aruk","GOC:bc","PMID:15066275","PMID:23985560","PMID:23209154","PMID:15066283","PMID:14744438","PMID:28379604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"miRNA-mediated post-transcriptional gene silencing","synonyms":[{"name":"gene silencing by miRNA","type":"exact"},{"name":"gene silencing by microRNA","type":"exact"},{"name":"miRNA-mediated gene silencing","type":"broad"},{"name":"microRNA-mediated gene silencing","type":"exact"}],"termid":"GO:0035195"}


id: PBO:0084828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for outer membrane protein import; cooperates with Tom70p to import the subset of proteins with multiple alpha-helical transmembrane segments, including Ugo1p, Tom20p, and others; forms a complex with Mim2p in the outer membrane that functions as cation-selective channel for translocation of positively charged precursor segments; also has a role in assembly of Tom20p into the TOM complex","termid":"PBO:0084828"}


id: PBO:0055419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2849","termid":"PBO:0055419"}


id: PBO:0081808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 1, Y-linked","termid":"PBO:0081808"}


id: PBO:0044936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyguanosine kinase","termid":"PBO:0044936"}


id: PBO:0042569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A divergent transcript","termid":"PBO:0042569"}


id: FYPO:0002830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during vegetative growth","synonyms":[{"name":"delayed onset of protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein/peptide phosphorylation during vegetative growth","type":"exact"},{"name":"delayed protein phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002830"}


id: GO:1905783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of a CENP-A containing nucleosome into its constituent components.","definition_xrefs":["GOC:TermGenie","PMID:27666591","GO_REF:0000079"],"gene_count":0,"genotype_count":0,"name":"obsolete CENP-A containing nucleosome disassembly (obsolete GO:1905783)","synonyms":[{"name":"centromere specific nucleosome disassembly","type":"related"},{"name":"centromere-specific nucleosome disassembly","type":"related"},{"name":"centromeric nucleosome disassembly","type":"related"}],"termid":"GO:1905783"}


id: PBO:0079427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 10","termid":"PBO:0079427"}


id: PBO:0062679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily L member 1","termid":"PBO:0062679"}


id: PBO:0051288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-37 (non-functional)","termid":"PBO:0051288"}


id: GO:0003789
data:
  {"annotated_genes":["SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88662],"is_not":false,"summary":null,"term":"GO:0003789"}]},"cv_name":"molecular_function","definition":"Binding to an actin subunit and promoting its dissociation from an actin filament by a local change in actin subunit conformation and orientation, and severing of filaments.","definition_xrefs":["PMID:11812157","PMID:23395798","PMID:23727096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex destabilizing activity","termid":"GO:0140776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"actin filament severing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin depolymerizing activity","type":"exact"}],"termid":"GO:0003789","terms_by_termid":{"GO:0003789":null}}


id: PBO:0073804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 10, pseudogene","termid":"PBO:0073804"}


id: PBO:0053898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1186","termid":"PBO:0053898"}


id: SO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7_cyano_7_deazaguanosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven_cyano_seven_deazaguanosine","secondary_identifiers":["RNAMOD:047"],"synonyms":[{"name":"7-cyano-7-deazaguanosine","type":"exact"},{"name":"preQ0","type":"exact"},{"name":"seven cyano seven deazaguanosine","type":"exact"}],"termid":"SO:0001321"}


id: GO:0047623
data:
  {"annotated_genes":["SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003876"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an adenosine-phosphate + H20 = an inosine phosphate + NH3. Catalyzes the deamination of AMP, ADP or ATP.","definition_xrefs":["MetaCyc:ADENOSINE-PHOSPHATE-DEAMINASE-RXN","EC:3.5.4.17","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04123":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"adenosine-phosphate deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenine nucleotide deaminase activity","type":"related"},{"name":"adenosine (phosphate) deaminase activity","type":"related"},{"name":"adenosine-phosphate aminohydrolase activity","type":"related"}],"termid":"GO:0047623","terms_by_termid":{"GO:0003876":null}}


id: FYPO:0002695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of methylenetetrahydrofolate reductase (NADPH) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}


id: PBO:0040176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartoacylase","termid":"PBO:0040176"}


id: GO:0016890
data:
  {"annotated_genes":["SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990043"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages at specific sites within a deoxyribonucleic acid molecule by creating internal breaks.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01262":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"site-specific endodeoxyribonuclease activity, specific for altered base","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.25.-"],"termid":"GO:0016890","terms_by_termid":{"GO:1990043":null}}


id: PBO:0029960
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytochrome-c_oxidase_activity","termid":"PBO:0029960"}


id: GO:1905575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GM3.","definition_xrefs":["GOC:TermGenie","PMID:1454804","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ganglioside GM3 binding","termid":"GO:1905575"}


id: GO:0060750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mammary gland branch epithelial cells, resulting in the elongation of the branch. The mammary gland branch differs from the bud in that it is not the initial curved portion of the outgrowth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell proliferation","termid":"GO:0033598"},{"relation_name":"part_of","term_name":"branch elongation involved in mammary gland duct branching","termid":"GO:0060751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in mammary gland duct elongation","termid":"GO:0060750"}


id: PBO:0084991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent alpha-keto amide reductase; reduces aromatic alpha-keto amides, aliphatic alpha-keto esters, and aromatic alpha-keto esters; member of the aldo-keto reductase (AKR) family; protein abundance increases in response to DNA replication stress","termid":"PBO:0084991"}


id: GO:0090592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis of DNA that is a part of the process of duplicating one or more molecules of DNA.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"},{"relation_name":"part_of","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"}


id: PBO:0045381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP3 pseudogene 2","termid":"PBO:0045381"}


id: GO:0034324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a hexyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"hexanoyltransferase activity","termid":"GO:0034327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"O-hexanoyltransferase activity","termid":"GO:0034324"}


id: GO:1900128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G-protein activated inward rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inward rectifier potassium channel activity","termid":"GO:1901979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of G-protein activated inward rectifier potassium channel activity","synonyms":[{"name":"regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"}],"termid":"GO:1900128"}


id: PBO:0039627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A9","termid":"PBO:0039627"}


id: PBO:0034662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_to_vacuole_transport","termid":"PBO:0034662"}


id: PBO:0052309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0408","termid":"PBO:0052309"}


id: PATO:0002108
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's resembling small nipple like projection.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exserted","termid":"PATO:0000623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary","termid":"PATO:0002108"}


id: PR:O74791
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine nucleotide-binding protein-like 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase grn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.08c","secondary_identifiers":["UniProtKB:O74791"],"synonyms":[{"name":"GTPase in ribosomal export from the nucleolus protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GNL3","type":"exact"},{"name":"nuclear GTP-binding protein grn1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74791"}


id: PBO:0091532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin bimC subfamily","termid":"PBO:0091532"}


id: PBO:0038919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G1","termid":"PBO:0038919"}


id: GO:1905012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 'de novo' NAD biosynthetic process from tryptophan.","definition_xrefs":["GOC:TermGenie","GOC:PARL","PMID:12140278","PMID:19843166","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tryptophan metabolic process","termid":"GO:0090357"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"regulation of NAD metabolic process","termid":"GO:1902688"},{"relation_name":"regulates","term_name":"'de novo' NAD biosynthetic process from tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of 'de novo' NAD biosynthetic process from tryptophan","synonyms":[{"name":"regulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905012"}


id: PBO:0040741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 7","termid":"PBO:0040741"}


id: PR:O43037
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mnh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mago nashi homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.08c","synonyms":[{"name":"Spom972h-mnh1","type":"exact"}],"termid":"PR:O43037"}


id: GO:0006727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ommochromes, any of a large group of natural polycyclic pigments commonly found in the Arthropoda, particularly in the ommatidia of the compound eye.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment biosynthetic process","termid":"GO:0006726"},{"relation_name":"is_a","term_name":"ocellus pigment biosynthetic process","termid":"GO:0008055"},{"relation_name":"is_a","term_name":"ommochrome metabolic process","termid":"GO:0046152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ommochrome biosynthetic process","synonyms":[{"name":"ommochrome anabolism","type":"exact"},{"name":"ommochrome biosynthesis","type":"exact"},{"name":"ommochrome formation","type":"exact"},{"name":"ommochrome synthesis","type":"exact"}],"termid":"GO:0006727"}


id: PBO:0060850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 1","termid":"PBO:0060850"}


id: GO:0002941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of type B synoviocytes by cell division, resulting in the expansion of their population. A type B synoviocyte is a fibroblast-like cell found in synovial tissues.","definition_xrefs":["PMID:10770586","PMID:9546370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synoviocyte proliferation","termid":"GO:0002941"}


id: PBO:0047528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 2","termid":"PBO:0047528"}


id: PBO:0083496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL194W/CDC6","termid":"PBO:0083496"}


id: PR:O60109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pho8 gene.","definition_xrefs":["UniProtKB:O60109","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.13c","synonyms":[{"name":"Spom972h-pho8","type":"exact"}],"termid":"PR:O60109"}


id: PBO:0070028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1325, pseudogene","termid":"PBO:0070028"}


id: GO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete inward rectifier channel (obsolete GO:0005241)","synonyms":[{"name":"inward rectifier channel","type":"exact"}],"termid":"GO:0005241"}


id: GO:0061945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of protein K-48-linked ubiquitination, a protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is added to a protein. K48-linked ubiquitination targets the substrate protein for degradation.","definition_xrefs":["PMID:23460740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"regulates","term_name":"protein K48-linked ubiquitination","termid":"GO:0070936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein K48-linked ubiquitination","termid":"GO:0061945"}


id: FYPO:0008049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in meiosis in which dimethylation of lysine at position 4 of histone H3 is increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation during meiosis","termid":"FYPO:0008049"}


id: PBO:0031678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_cell_cycle_arrest_in_response_to_pheromone","termid":"PBO:0031678"}


id: PR:O43085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsc1 gene.","definition_xrefs":["UniProtKB:O43085","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSC E3 ubiquitin ligase complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.10","synonyms":[{"name":"Spom972h-dsc1","type":"exact"},{"name":"defective for SREBP cleavage protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43085"}


id: PBO:0043154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 22","termid":"PBO:0043154"}


id: FYPO:0004171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell that is subject to glucose starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during glucose starvation","synonyms":[{"name":"normal RNA accumulation during glucose starvation","type":"related"},{"name":"normal RNA level during cellular response to glucose starvation","type":"exact"},{"name":"normal RNA level during glucose depletion","type":"exact"},{"name":"normal RNA level during glucose deprivation","type":"exact"},{"name":"normal RNA level during glucose limitation","type":"related"},{"name":"normal cellular RNA level during glucose starvation","type":"exact"},{"name":"normal mRNA level during glucose starvation","type":"narrow"},{"name":"normal transcript level during glucose starvation","type":"exact"}],"termid":"FYPO:0004171"}


id: GO:0004510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + tetrahydrobiopterin + O2 = 5-hydroxy-L-tryptophan + 4-alpha-hydroxytetrahydrobiopterin + H2O.","definition_xrefs":["EC:1.14.16.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tryptophan 5-monooxygenase activity","secondary_identifiers":["RHEA:16709","MetaCyc:TRYPTOPHAN-5-MONOOXYGENASE-RXN","Reactome:R-HSA-209828"],"synonyms":[{"name":"L-tryptophan hydroxylase activity","type":"exact"},{"name":"L-tryptophan,tetrahydrobiopterin:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"indoleacetic acid-5-hydroxylase activity","type":"related"},{"name":"tryptophan 5-hydroxylase activity","type":"related"},{"name":"tryptophan hydroxylase activity","type":"related"}],"termid":"GO:0004510"}


id: GO:1905196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATPase activity, uncoupled.","definition_xrefs":["PMID:26545917","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ATPase activity, uncoupled (obsolete GO:1905196)","synonyms":[{"name":"activation of ATPase activity, uncoupled","type":"narrow"},{"name":"activation of adenylpyrophosphatase activity","type":"related"},{"name":"positive regulation of adenylpyrophosphatase activity","type":"related"},{"name":"up regulation of ATPase activity, uncoupled","type":"exact"},{"name":"up regulation of adenylpyrophosphatase activity","type":"related"},{"name":"up-regulation of ATPase activity, uncoupled","type":"exact"},{"name":"up-regulation of adenylpyrophosphatase activity","type":"related"},{"name":"upregulation of ATPase activity, uncoupled","type":"exact"},{"name":"upregulation of adenylpyrophosphatase activity","type":"related"}],"termid":"GO:1905196"}


id: GO:1902085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fumagillin.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23488861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"fumagillin metabolic process","termid":"GO:1902084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fumagillin catabolic process","synonyms":[{"name":"fumagillin breakdown","type":"exact"},{"name":"fumagillin catabolism","type":"exact"},{"name":"fumagillin degradation","type":"exact"}],"termid":"GO:1902085"}


id: PBO:0081069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 2","termid":"PBO:0081069"}


id: GO:0046321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid oxidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"regulation of fatty acid oxidation","termid":"GO:0046320"},{"relation_name":"positively_regulates","term_name":"fatty acid oxidation","termid":"GO:0019395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fatty acid oxidation","synonyms":[{"name":"activation of fatty acid oxidation","type":"narrow"},{"name":"stimulation of fatty acid oxidation","type":"narrow"},{"name":"up regulation of fatty acid oxidation","type":"exact"},{"name":"up-regulation of fatty acid oxidation","type":"exact"},{"name":"upregulation of fatty acid oxidation","type":"exact"}],"termid":"GO:0046321"}


id: GO:0006722
data:
  {"annotated_genes":["SJAG_00624","SJAG_03360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65757,84901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving triterpenoid compounds, terpenoids with six isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00624":null,"SJAG_03360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triterpenoid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"triterpene metabolic process","type":"narrow"},{"name":"triterpene metabolism","type":"narrow"},{"name":"triterpenoid metabolism","type":"exact"}],"termid":"GO:0006722","terms_by_termid":{"GO:0016104":null}}


id: GO:0048817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of hair follicle maturation.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"is_a","term_name":"negative regulation of hair follicle development","termid":"GO:0051799"},{"relation_name":"negatively_regulates","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hair follicle maturation","synonyms":[{"name":"down regulation of hair follicle maturation","type":"exact"},{"name":"down-regulation of hair follicle maturation","type":"exact"},{"name":"downregulation of hair follicle maturation","type":"exact"},{"name":"inhibition of hair follicle maturation","type":"narrow"}],"termid":"GO:0048817"}


id: GO:0018301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into an iron-sulfur cluster by tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon.","definition_xrefs":["RESID:AA0268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-cysteine persulphido-bis-L-glutamato-L-histidino tetrairon","type":"exact"}],"termid":"GO:0018301"}


id: GO:0021970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after exiting the cerebral peduncle through the basilar pons in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:dph","PMID:9878731","GOC:dgh","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the basilar pons","synonyms":[{"name":"corticospinal neuron axon pathfinding through the basilar pons","type":"exact"}],"termid":"GO:0021970"}


id: PBO:0065057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 11","termid":"PBO:0065057"}


id: PATO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000752 mating value (obsolete PATO:0000752)","termid":"PATO:0000752"}


id: PBO:0075667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 2","termid":"PBO:0075667"}


id: GO:0004852
data:
  {"annotated_genes":["SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92505],"is_not":false,"summary":null,"term":"GO:0004852"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymethylbilane = H2O + uroporphyrinogen III.","definition_xrefs":["EC:4.2.1.75","RHEA:18965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"uroporphyrinogen-III synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-189488","KEGG_REACTION:R03165","MetaCyc:UROGENIIISYN-RXN"],"synonyms":[{"name":"URO-synthase activity","type":"related"},{"name":"hydroxymethylbilane hydro-lyase (cyclizing) activity","type":"related"},{"name":"hydroxymethylbilane hydro-lyase (cyclizing; uroporphyrinogen-III-forming)","type":"related"},{"name":"porphobilinogenase activity","type":"related"},{"name":"uroporphyrinogen III cosynthase activity","type":"related"},{"name":"uroporphyrinogen isomerase activity","type":"related"},{"name":"uroporphyrinogen-III cosynthase activity","type":"related"},{"name":"uroporphyrinogen-III cosynthetase activity","type":"related"}],"termid":"GO:0004852","terms_by_termid":{"GO:0004852":null}}


id: PBO:0001276
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.36","termid":"PBO:0001276"}


id: GO:0045341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of major histocompatibility protein class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"MHC class I biosynthetic process","synonyms":[{"name":"MHC class I anabolism","type":"exact"},{"name":"MHC class I biosynthesis","type":"exact"},{"name":"MHC class I formation","type":"exact"},{"name":"MHC class I synthesis","type":"exact"},{"name":"major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"major histocompatibility complex class I biosynthetic process","type":"exact"}],"termid":"GO:0045341"}


id: PBO:0028251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_septum","termid":"PBO:0028251"}


id: GO:0036511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the first alpha-1,2-linked mannose from the A-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["PMID:12829701","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum mannose trimming","termid":"GO:1904380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimming of first mannose on A branch","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8A(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8A","type":"related"},{"name":"glycoprotein mannose trimming on A branch","type":"broad"}],"termid":"GO:0036511"}


id: PBO:0038446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAR2 splicing factor","termid":"PBO:0038446"}


id: PBO:0112983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' exonuclease, 5' flap endonuclease; required for Okazaki fragment processing and maturation, for long-patch base-excision repair and large loop repair (LLR), ribonucleotide excision repair; cleaves off RNA flap in a RNA:DNA hybrid intermediate during processing of DNA lagging strand; relocalizes to the cytosol in response to hypoxia; member of the S. pombe RAD2/FEN1 family","termid":"PBO:0112983"}


id: GO:1900804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of brevianamide F.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete brevianamide F catabolic process (obsolete GO:1900804)","synonyms":[{"name":"L-prolyl-L-tryptophan anhydride breakdown","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride catabolic process","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride catabolism","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride degradation","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride breakdown","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride catabolic process","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride catabolism","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride degradation","type":"related"},{"name":"brevianamide F breakdown","type":"exact"},{"name":"brevianamide F catabolism","type":"exact"},{"name":"brevianamide F degradation","type":"exact"},{"name":"cyclo-(Trp-Pro) breakdown","type":"related"},{"name":"cyclo-(Trp-Pro) catabolic process","type":"related"},{"name":"cyclo-(Trp-Pro) catabolism","type":"related"},{"name":"cyclo-(Trp-Pro) degradation","type":"related"},{"name":"cyclo-L-Trp-L-Pro breakdown","type":"related"},{"name":"cyclo-L-Trp-L-Pro catabolic process","type":"related"},{"name":"cyclo-L-Trp-L-Pro catabolism","type":"related"},{"name":"cyclo-L-Trp-L-Pro degradation","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline breakdown","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline catabolic process","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline catabolism","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline degradation","type":"related"},{"name":"tryptophan-proline diketopiperazine breakdown","type":"related"},{"name":"tryptophan-proline diketopiperazine catabolic process","type":"related"},{"name":"tryptophan-proline diketopiperazine catabolism","type":"related"},{"name":"tryptophan-proline diketopiperazine degradation","type":"related"}],"termid":"GO:1900804"}


id: GO:0031297
data:
  {"annotated_genes":["SJAG_02198","SJAG_01076","SJAG_02698","SJAG_01832","SJAG_01410","SJAG_02294","SJAG_04183","SJAG_04971","SJAG_05372","SJAG_02465","SJAG_03843","SJAG_00727","SJAG_00177","SJAG_02079","SJAG_02724","SJAG_05012","SJAG_03728","SJAG_03780","SJAG_00623","SJAG_01221","SJAG_02992","SJAG_04272","SJAG_01374","SJAG_02439","SJAG_03097","SJAG_02822","SJAG_05237","SJAG_03898","SJAG_01044","SJAG_05180","SJAG_01185","SJAG_01572","SJAG_01677","SJAG_02299","SJAG_00935"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85328,85752,87095,90740,92149,92310,93629,95188,95404,95495,96764,97287,97639,100273,101838,102741,103868,104258,104625,105196,108631,110391,112908,113200,113535],"is_not":false,"summary":null,"term":"GO:0031297"},{"annotations":[94379,91201,87092,92309,95186,105666,90955,92146,103867,105194,112907,85326,108629,103843,95069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990426"},{"annotations":[100274,108632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071932"},{"annotations":[85753,105668,85329,106075,110392,111613,112909,95189,92311,95071,92820,87664],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120290"}]},"cv_name":"biological_process","definition":"The process in which a DNA replication fork that has stalled is restored to a functional state and replication is restarted. The stalling may be due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes.","definition_xrefs":["GOC:vw","PMID:17660542","PMID:15367656","PMID:11459955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication maintenance of fidelity","termid":"GO:0045005"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00177":null,"SJAG_00623":null,"SJAG_00727":null,"SJAG_00935":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01185":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01572":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02294":null,"SJAG_02299":null,"SJAG_02439":null,"SJAG_02465":null,"SJAG_02698":null,"SJAG_02724":null,"SJAG_02822":null,"SJAG_02992":null,"SJAG_03097":null,"SJAG_03728":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04183":null,"SJAG_04272":null,"SJAG_04971":null,"SJAG_05012":null,"SJAG_05180":null,"SJAG_05237":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"replication fork processing","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034065"],"synonyms":[{"name":"collapsed replication fork processing","type":"exact"},{"name":"recovery from replication fork arrest","type":"exact"},{"name":"recovery from replication fork arrest at rDNA locus","type":"narrow"},{"name":"recovery from replication fork stalling","type":"exact"},{"name":"recovery from replication fork stalling at rDNA locus","type":"narrow"},{"name":"replication fork processing at rDNA locus","type":"narrow"},{"name":"replication fork processing at ribosomal DNA locus","type":"narrow"},{"name":"replication fork restart","type":"related"},{"name":"replication restart","type":"related"}],"termid":"GO:0031297","terms_by_termid":{"GO:0031297":null,"GO:0071932":null,"GO:0120290":null,"GO:1990426":null}}


id: GO:1990506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA replication process that uses parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands during the mitotic cell cycle.","definition_xrefs":["PMID:16120966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007049","GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"mitotic DNA-templated DNA replication","synonyms":[{"name":"mitotic DNA-dependent DNA replication","type":"exact"}],"termid":"GO:1990506"}


id: PBO:0040369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 6","termid":"PBO:0040369"}


id: FYPO:0001226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and contains a single nucleus and an asymmetrically located septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell with mislocalized septum and anucleate compartment","termid":"FYPO:0007652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000032","FYPO:0000004","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"inviable mononucleate vegetative cell with mislocalized septum and anucleate compartment","synonyms":[{"name":"inviable mononucleate cell with mislocalized septum during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with mislocalized septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with abnormal septum location","type":"exact"},{"name":"inviable mononucleate vegetative cell with abnormal septum position","type":"exact"},{"name":"inviable mononucleate vegetative cell with asymmetric septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with asymmetrically located septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with mislocalised septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with mislocalized septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with mislocalized septum during mitotic cell cycle","type":"related"},{"name":"inviable mononucleate vegetative cell with misplaced septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with single mislocalized septum","type":"exact"},{"name":"lethal; mononucleate vegetative cell with mislocalized septum","type":"exact"}],"termid":"FYPO:0001226"}


id: PBO:0004692
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.25","termid":"PBO:0004692"}


id: GO:2000775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any histone H3-S10 phosphorylation that is involved in chromosome condensation.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-S10 phosphorylation involved in chromosome condensation (obsolete GO:2000775)","synonyms":[{"name":"histone H3 phosphorylation at S10 of chromosome condensation","type":"exact"},{"name":"histone H3-S10 phosphorylation of chromosome condensation","type":"exact"}],"termid":"GO:2000775"}


id: PBO:0044926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase delta","termid":"PBO:0044926"}


id: PBO:0056571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCPH1 divergent transcript","termid":"PBO:0056571"}


id: PBO:0066518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator like 3","termid":"PBO:0066518"}


id: PBO:0074757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 116","termid":"PBO:0074757"}


id: PBO:0080944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger B-box domain containing","termid":"PBO:0080944"}


id: PBO:0042793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 170 pseudogene 1","termid":"PBO:0042793"}


id: PBO:0067172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 228, pseudogene","termid":"PBO:0067172"}


id: PBO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Phenylalanine","termid":"PBO:0002185"}


id: PBO:0048046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 4","termid":"PBO:0048046"}


id: PBO:0077697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tankyrase 1 binding protein 1","termid":"PBO:0077697"}


id: PBO:0051999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JARID2 divergent transcript","termid":"PBO:0051999"}


id: GO:0004675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["EC:2.7.11.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"transmembrane receptor protein kinase activity","termid":"GO:0019199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0004672","GO:0016301","GO:0038023","GO:0140096"],"is_obsolete":false,"name":"transmembrane receptor protein serine/threonine kinase activity","secondary_identifiers":["Reactome:R-HSA-198732","Reactome:R-HSA-170868","Reactome:R-HSA-201476","RHEA:18673","MetaCyc:2.7.11.30-RXN"],"synonyms":[{"name":"receptor protein serine/threonine kinase activity","type":"related"},{"name":"receptor serine/threonine protein kinase activity","type":"related"}],"termid":"GO:0004675"}


id: PBO:0072511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 40","termid":"PBO:0072511"}


id: GO:0034940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-oxo-4,5-dihydropyrrole-2-carboxylate + 2 H2O = 2-oxoglutarate + NH3.","definition_xrefs":["UM-BBD_reactionID:r0984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"5-oxo-4,5-dihydropyrrole-2-carboxylate amidase activity","termid":"GO:0034940"}


id: PBO:0059584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioadenosine phosphorylase pseudogene 1","termid":"PBO:0059584"}


id: PBO:0072524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 53","termid":"PBO:0072524"}


id: PBO:0034190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-provides_nutrients_for","termid":"PBO:0034190"}


id: PBO:0046893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 13 member C","termid":"PBO:0046893"}


id: PBO:0044137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 3","termid":"PBO:0044137"}


id: PBO:0073176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein H","termid":"PBO:0073176"}


id: GO:0033302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving O-glucosylated derivatives of quercetin.","definition_xrefs":["MetaCyc:PWY-5321","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin O-glucoside metabolic process","synonyms":[{"name":"quercetin O-glucoside metabolism","type":"exact"}],"termid":"GO:0033302"}


id: PBO:0054865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2279","termid":"PBO:0054865"}


id: GO:0039709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a virus capsid that occurs in the cytoplasm.","definition_xrefs":["VZ:1950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid assembly","termid":"GO:0019069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic capsid assembly","termid":"GO:0039709"}


id: PBO:0085246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (PPIase); nuclear proline isomerase; affects expression of multiple genes via its role in nucleosome assembly; catalyzes isomerization of proline residues in histones H3 and H4, which affects lysine methylation of those histones; PPIase domain acts as a transcriptional repressor when tethered to DNA by lexA, and repressor activity is dependent on PPIase activity; contains a nucleoplasmin-like fold and can form pentamers","termid":"PBO:0085246"}


id: GO:0044221
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between a nerve fiber of one host neuron and another host neuron or muscle fiber or glial cell; the site of interneuronal communication.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell synapse","termid":"GO:0044221"}


id: GO:0050093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanol + NAD+ = formaldehyde + H+ + NADH.","definition_xrefs":["RHEA:19401","EC:1.1.1.244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"methanol dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R00605","MetaCyc:METHANOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"methanol dehydrogenase activity","type":"broad"},{"name":"methanol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050093"}


id: PBO:0081857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 790","termid":"PBO:0081857"}


id: PBO:0074197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 7","termid":"PBO:0074197"}


id: PR:O74941
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisome biogenesis factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23077:SF12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ATPase pex1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.03","secondary_identifiers":["UniProtKB:O74941"],"synonyms":[{"name":"SPCC553.03","type":"related"},{"name":"Spom972h-PEX1","type":"exact"},{"name":"peroxin-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisome biogenesis protein pex1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74941"}


id: GO:0019688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine deoxyribonucleoside is synthesized from another purine deoxyribonucleoside.","definition_xrefs":["ISBN:0471394831","GOC:mah","ISBN:0306444747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside interconversion","termid":"GO:0019686"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside metabolic process","termid":"GO:0046122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside interconversion","termid":"GO:0019688"}


id: GO:0140642
data:
  {"annotated_genes":["SJAG_01613","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95344,97547],"is_not":false,"summary":null,"term":"GO:0140642"}]},"cv_name":"biological_process","definition":"The spindle organization process in which the spindle is maintained at a constant length during meiotic metaphase.","definition_xrefs":["PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle assembly","termid":"GO:0090306"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0044085","GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic spindle formation (spindle phase two)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140642","terms_by_termid":{"GO:0140642":null}}


id: PBO:0064227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C gamma 1","termid":"PBO:0064227"}


id: PBO:0051375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3/OR2-268 (non-functional)","termid":"PBO:0051375"}


id: GO:0018710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetone + ATP + CO2 + 2 H2O = acetoacetate + AMP + 4 H+ + 2 phosphate.","definition_xrefs":["EC:6.4.1.6","RHEA:18385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetone carboxylase activity","secondary_identifiers":["MetaCyc:6.4.1.6-RXN","KEGG_REACTION:R05735"],"synonyms":[{"name":"acetone:carbon-dioxide ligase (AMP-forming)","type":"related"}],"termid":"GO:0018710"}


id: PBO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic mitochondrial protein (predicted)","termid":"PBO:0002043"}


id: PBO:0081745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 675","termid":"PBO:0081745"}


id: PBO:0038845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 14","termid":"PBO:0038845"}


id: GO:0072053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal inner medulla over time, from its formation to the mature structure. The renal inner medulla is unique to mammalian kidneys and is the innermost region of the mammalian kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal inner medulla development","synonyms":[{"name":"inner renal medulla development","type":"exact"}],"termid":"GO:0072053"}


id: GO:0048089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental pigmentation","termid":"GO:0048070"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"female pigmentation","termid":"GO:0048095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female pigmentation","termid":"GO:0048089"}


id: PATO:0002528
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete borderline intensity (obsolete PATO:0002528)","termid":"PATO:0002528"}


id: PBO:0055100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2518","termid":"PBO:0055100"}


id: MOD:01511
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-117 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01511"}


