# terms

id: PBO:0013121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein Dbl2","termid":"PBO:0013121"}


id: PBO:0069097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 344, pseudogene","termid":"PBO:0069097"}


id: GO:1901311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of gene expression involved in extracellular matrix organization.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of gene expression involved in extracellular matrix organization (obsolete GO:1901311)","synonyms":[{"name":"regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"regulation of extracellular matrix protein production","type":"related"}],"termid":"GO:1901311"}


id: MOD:00121
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-threonine residue by a thioether bond to form (2S,3S,2'R)-3-methyllanthionine.","definition_xrefs":["RESID:AA0112","PubMed:3769923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-methyllanthionine","termid":"MOD:01981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3S,2'R)-3-methyllanthionine","synonyms":[{"name":"(2S,3S)-2-amino-3-([(2R)-2-amino-2-carboxyethyl]sulfanyl)butanoic acid","type":"exact"},{"name":"(2S,3S,2'R)-2-amino-3-[(2-amino-2-carboxyethyl)thio]butanoic acid","type":"exact"},{"name":"(2S,3S,2'R)-3-methyllanthionine","type":"exact"},{"name":"(2S,3S,6R)-2,6-diamino-3-methyl-4-thiaheptanedioic acid","type":"exact"},{"name":"(2S,3S,6R)-3-methyllanthionine","type":"exact"},{"name":"(2S-[2R*,3R*(S*)])-2-amino-3-[(2-amino-2-carboxyethyl)thio]butanoic acid","type":"exact"},{"name":"3-methyl-D,L-lanthionine","type":"exact"},{"name":"CROSSLNK Beta-methyllanthionine (Cys-Thr)","type":"exact"},{"name":"CROSSLNK Beta-methyllanthionine (Thr-Cys)","type":"exact"},{"name":"XLNK-SCys-3Dhb","type":"exact"},{"name":"cysteine-3-D-butyrine thioether","type":"exact"}],"termid":"MOD:00121"}


id: GO:0050272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chloro-L-alanine + thioglycolate = S-carboxymethyl-L-cysteine + chloride + H+.","definition_xrefs":["EC:4.5.1.5","RHEA:22868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"S-carboxymethylcysteine synthase activity","secondary_identifiers":["KEGG_REACTION:R04003","MetaCyc:S-CARBOXYMETHYLCYSTEINE-SYNTHASE-RXN"],"synonyms":[{"name":"3-chloro-L-alanine chloride-lyase (adding thioglycolate)","type":"related"},{"name":"3-chloro-L-alanine chloride-lyase (adding thioglycolate; S-carboxymethyl-L-cysteine-forming)","type":"related"},{"name":"S-carboxymethyl-L-cysteine synthase activity","type":"related"}],"termid":"GO:0050272"}


id: PBO:0034489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_reverse_centromeric_outer_repeat_transcript_level","termid":"PBO:0034489"}


id: PBO:0041468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 16","termid":"PBO:0041468"}


id: GO:0071892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell activation process that occurs in thrombocytes and consists of a series of progressive, overlapping events including shape change, adhesiveness, and aggregation, which, when carried through to completion, lead to the formation of a stable hemostatic plug. Thrombocytes are nucleated cells found in non-mammalian vertebrates and are involved in hemostasis. They are the functional equivalent of the non-nucleated platelets found in mammals.","definition_xrefs":["GOC:mah","PMID:15634265","PMID:20180901","PMID:10606877","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thrombocyte activation","synonyms":[{"name":"blood coagulation, thrombocyte activation","type":"exact"}],"termid":"GO:0071892"}


id: PBO:0076601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D22A antisense RNA 1","termid":"PBO:0076601"}


id: GO:0010626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency or extent of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"is_a","term_name":"negative regulation of glial cell proliferation","termid":"GO:0060253"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"}


id: PBO:0069305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 561, pseudogene","termid":"PBO:0069305"}


id: PBO:0052593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 2 pseudogene 2","termid":"PBO:0052593"}


id: FYPO_EXT:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"all cells (penetrance)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complete","synonyms":[{"name":"100%","type":"exact"},{"name":"full","type":"exact"}],"termid":"FYPO_EXT:0000004"}


id: GO:0140316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding directly to sorting signals in the cytosolic tails of transmembrane cargos (or transmembrane cargo receptors serving as recognition interfaces for lumenal cargos), to concentrate them into vesicles or tubules for transport via intracellular vesicular transport or the secretory pathway.","definition_xrefs":["PMID:25795254"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular transport adaptor activity (obsolete GO:0140316)","termid":"GO:0140316"}


id: SO:0000280
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_gene","synonyms":[{"name":"engineered gene","type":"exact"}],"termid":"SO:0000280"}


id: GO:0021664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of rhombomere 5 are generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 5 development","termid":"GO:0021571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 morphogenesis","termid":"GO:0021664"}


id: PBO:0068012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 317","termid":"PBO:0068012"}


id: FYPO:0007051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell differs from normal during a cellular stress response to zinc ions. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level during cellular response to zinc ion","termid":"FYPO:0001550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"altered protein level during stress response to zinc ion","synonyms":[{"name":"abnormal protein level during stress response to zinc ion","type":"exact"},{"name":"altered cellular protein level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"altered protein level during cellular response to excess zinc","type":"exact"},{"name":"altered protein level during cellular response to high zinc level","type":"exact"},{"name":"altered protein level during cellular response to replete zinc","type":"related"},{"name":"altered protein level during cellular stress response to zinc ion","type":"exact"},{"name":"altered protein level during response to zinc ion stress","type":"exact"},{"name":"altered protein level during response to zinc toxicity","type":"related"},{"name":"altered protein level during stress response to zinc","type":"exact"},{"name":"altered protein level during stress response to zinc ion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007051"}


id: GO:0010256
data:
  {"annotated_genes":["SJAG_04196","SJAG_03073","SJAG_04023","SJAG_01467","SJAG_03491","SJAG_00700","SJAG_01906","SJAG_02338","SJAG_00185","SJAG_03812","SJAG_04319","SJAG_03005","SJAG_04930","SJAG_04578","SJAG_01999","SJAG_03170","SJAG_04528","SJAG_01223","SJAG_02626","SJAG_02330","SJAG_04598","SJAG_01003","SJAG_00416","SJAG_01912","SJAG_04417","SJAG_03592","SJAG_02683","SJAG_03783","SJAG_01356","SJAG_04887","SJAG_00959","SJAG_00906","SJAG_02208","SJAG_00900","SJAG_01233","SJAG_02087","SJAG_01745","SJAG_01564","SJAG_03891","SJAG_05289","SJAG_01571","SJAG_04221","SJAG_01116","SJAG_00064","SJAG_04972","SJAG_04489","SJAG_03449","SJAG_00357","SJAG_02065","SJAG_01460","SJAG_03795","SJAG_00277","SJAG_01240","SJAG_00284","SJAG_00053","SJAG_00810","SJAG_02595","SJAG_00578","SJAG_04227","SJAG_03315","SJAG_01127","SJAG_04684","SJAG_01940","SJAG_04966","SJAG_03270","SJAG_01848","SJAG_01422","SJAG_02924","SJAG_01437","SJAG_01448","SJAG_02100","SJAG_01772","SJAG_01633","SJAG_04413","SJAG_01168","SJAG_01178","SJAG_03930","SJAG_03940","SJAG_03892","SJAG_02351","SJAG_02878","SJAG_03558","SJAG_03670","SJAG_02120","SJAG_05207","SJAG_03313","SJAG_01516","SJAG_00680","SJAG_02842","SJAG_04883","SJAG_02838","SJAG_04509","SJAG_05414","SJAG_00870","SJAG_00557","SJAG_03865","SJAG_01050","SJAG_01459","SJAG_02763","SJAG_04464","SJAG_04338","SJAG_02914","SJAG_00840","SJAG_01470","SJAG_04271","SJAG_00603","SJAG_01782","SJAG_01242","SJAG_02437","SJAG_00261","SJAG_04294","SJAG_03247","SJAG_03219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71450],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048309"},{"annotations":[88987],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016320"},{"annotations":[89794,86558,104670,100486,104840,108826,115637],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090158"},{"annotations":[114661,88988,87587,97679],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007029"},{"annotations":[63841],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071788"},{"annotations":[104751,111072,104671,114662,99578],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990809"},{"annotations":[104752],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071786"},{"annotations":[114231,93588,97906,114750,86559,115013,87612,107770,100487],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061817"},{"annotations":[85873,114503,96369,98777,92829],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007032"},{"annotations":[98301,105609,112450,92769,114874,99587,88237,92830,94837,91649,90391,100394,86428],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007030"},{"annotations":[86560,100489],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051685"},{"annotations":[89964,97550],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140515"},{"annotations":[93819,106432,89172,106025,84067,94489],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101026"},{"annotations":[106573],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007077"},{"annotations":[115591,115506,115589,107119],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101024"},{"annotations":[102668,115270,99850,115271,84130,115269,87474,94093,99261,115268,97008,92097],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007084"},{"annotations":[99787],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140516"},{"annotations":[90046],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034496"},{"annotations":[108855,99851,106433,115596,87858,96716,106574],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006998"},{"annotations":[87475,114242],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071765"},{"annotations":[84699],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048288"},{"annotations":[85237,88070,103833,99581,105843,87590,115638,87476],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071763"},{"annotations":[92771],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031468"},{"annotations":[92499,106306,91420,97313,88476],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032220"},{"annotations":[106876,106183,110787,92500,114540,88027,99995,113930,86310],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007009"},{"annotations":[92755],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0017121"},{"annotations":[107981,102998],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097320"},{"annotations":[104506,110497,111198,105449,87379,94496,100887,90959,104418,109954,97305,99634,102270,87792,94720,94187,100590,106510,108363],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045048"},{"annotations":[97592,97314],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097036"},{"annotations":[84120,107110,110235],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071816"},{"annotations":[103134,111308],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990854"},{"annotations":[104137,105922,113708,91689],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endomembrane system.","definition_xrefs":["GOC:mah","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component 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id: PBO:0058086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4303","termid":"PBO:0058086"}


id: PBO:0050584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate 6-O-sulfotransferase 1 pseudogene 1","termid":"PBO:0050584"}


id: GO:0019934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic GMP (cGMP), and ends with activation of downstream effectors that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cGMP-mediated signaling","synonyms":[{"name":"cGMP-mediated signalling","type":"exact"}],"termid":"GO:0019934"}


id: GO:0044448
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cell cortex, the region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cortex part (obsolete GO:0044448)","termid":"GO:0044448"}


id: PBO:0090291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex STAG protein Rec11","termid":"PBO:0090291"}


id: GO:0047730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-histidine + beta-alanine = AMP + diphosphate + carnosine.","definition_xrefs":["MetaCyc:CARNOSINE-SYNTHASE-RXN","EC:6.3.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"carnosine synthase activity","secondary_identifiers":["RHEA:19297","Reactome:R-HSA-6786245"],"synonyms":[{"name":"L-histidine:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"carnosine synthetase activity","type":"related"},{"name":"carnosine-anserine synthetase activity","type":"related"},{"name":"carnosine-homocarnosine synthetase activity","type":"related"},{"name":"homocarnosine-carnosine synthetase activity","type":"related"}],"termid":"GO:0047730"}


id: PBO:0038730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 25","termid":"PBO:0038730"}


id: PBO:0087067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L33A; N-terminally acetylated; rpl33a null mutant exhibits slow growth while rpl33a rpl33b double null mutant is inviable; homologous to mammalian ribosomal protein L35A, no bacterial homolog; RPL33A has a paralog, RPL33B, that arose from the whole genome duplication","termid":"PBO:0087067"}


id: FYPO:0006719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission does not occur during a cellular response to osmotic stress. Normally, mitochondria undergo fission when the cell is exposed to hyperosmotic conditions.","definition_xrefs":["PMID:28515144","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fission","termid":"FYPO:0004340"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitochondrial fission during cellular response to osmotic stress","synonyms":[{"name":"abolished mitochondrial fission during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial fission during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"abolished mitochondrial fragmentation during cellular response to osmotic stress","type":"exact"},{"name":"mitochondrial fission abolished during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006719"}


id: GO:0071433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of cell wall organization that results in the restoration of the cell wall following damage.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall repair","termid":"GO:0071433"}


id: PBO:0072872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB homeobox 2","termid":"PBO:0072872"}


id: PBO:0073814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 16","termid":"PBO:0073814"}


id: PBO:0047712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 3","termid":"PBO:0047712"}


id: PBO:0059847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like","termid":"PBO:0059847"}


id: PBO:0017555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic (sporulation) septin Spn2","termid":"PBO:0017555"}


id: MOD:01592
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 304.199-304.206 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at 304.199-304.206 Da","termid":"MOD:01592"}


id: PBO:0054282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1673","termid":"PBO:0054282"}


id: PBO:0089440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific low-complexity Glycine rich protein","termid":"PBO:0089440"}


id: GO:0002269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a leukocyte resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"},{"relation_name":"part_of","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte activation involved in inflammatory response","synonyms":[{"name":"immune cell activation during inflammatory response","type":"related"},{"name":"leukocyte activation during inflammatory response","type":"related"}],"termid":"GO:0002269"}


id: FYPO:0001160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition during stationary phase","synonyms":[{"name":"cell cycle arrest in mitotic G2 phase during stationary phase","type":"related"},{"name":"mitotic G2 phase arrest during stationary phase","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition during stationary phase","type":"exact"}],"termid":"FYPO:0001160"}


id: PBO:0039888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 5","termid":"PBO:0039888"}


id: PBO:0017432
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-temporally_related_to","termid":"PBO:0017432"}


id: PBO:0040594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 2","termid":"PBO:0040594"}


id: PBO:0011443
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kelley-Seegmiller syndrome","termid":"PBO:0011443"}


id: RO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x main_stem_of y if y is a branching structure and x is a channel that traces a linear path through y, such that x has higher capacity than any other such path.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"main_stem_of","termid":"RO:0002381"}


id: PBO:0080120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAC14 component of PIKFYVE complex","termid":"PBO:0080120"}


id: PBO:0076691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 8","termid":"PBO:0076691"}


id: FYPO:0002411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable curved elongated vegetative cell","synonyms":[{"name":"curved elongated inviable cell","type":"exact"},{"name":"inviable curved elongated cell","type":"exact"},{"name":"inviable curved elongated cell during vegetative growth","type":"exact"},{"name":"inviable curved elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002411"}


id: PBO:0042798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 290","termid":"PBO:0042798"}


id: PBO:0086886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor, contains Forkhead Associated domain; found associated with chromatin; target of SBF transcription factor; induced in response to DNA damaging agents and deletion of telomerase; PLM2 has a paralog, TOS4, that arose from the whole genome duplication","termid":"PBO:0086886"}


id: GO:0015802
data:
  {"annotated_genes":["SJAG_00877","SJAG_01636","SJAG_04725","SJAG_03400","SJAG_02029","SJAG_00051","SJAG_01923","SJAG_02716","SJAG_04983","SJAG_03256","SJAG_04715","SJAG_01336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86548],"is_not":false,"summary":null,"term":"GO:0015802"},{"annotations":[86547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[90725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[93480,100140,100141,84611,63536,100142,100143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[99953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[94944,62688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[93496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[99957,98921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[99958,106135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01923":null,"SJAG_02029":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04715":null,"SJAG_04725":null,"SJAG_04983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"basic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015802","terms_by_termid":{"GO:0015802":null,"GO:0034488":null,"GO:0034490":null,"GO:0089708":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null,"GO:1901482":null,"GO:1903826":null,"GO:1990822":null}}


id: FYPO:0000332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone acetylation occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone acetylation during vegetative growth","termid":"FYPO:0000456"},{"relation_name":"is_a","term_name":"increased protein acetylation during vegetative growth","termid":"FYPO:0004487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased histone acetylation during vegetative growth","synonyms":[{"name":"increased histone acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000332"}


id: PBO:0004464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator (predicted)","termid":"PBO:0004464"}


id: PBO:0065845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 1","termid":"PBO:0065845"}


id: MOD:00016
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-glutamine.","definition_xrefs":["PubMed:9342308","PubMed:3340166","PubMed:6692818","RESID:AA0007","ChEBI:30011","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 128.058578 Da","termid":"MOD:00894"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamine residue","synonyms":[{"name":"(2S)-2-amino-5-pentanediamic acid","type":"exact"},{"name":"2,5-bis(azanyl)-5-oxopentanoic acid","type":"exact"},{"name":"2,5-diamino-5-oxopentanoic acid","type":"exact"},{"name":"2-amino-4-carbamoylbutanoic acid","type":"exact"},{"name":"2-aminoglutaramic acid","type":"exact"},{"name":"Gln","type":"exact"},{"name":"L-glutamine","type":"exact"},{"name":"alpha-amino-gamma-carbamylbutyric acid","type":"exact"},{"name":"glutamic acid 5-amide","type":"exact"},{"name":"glutamic acid gamma-amide","type":"exact"},{"name":"glutamide","type":"exact"}],"termid":"MOD:00016"}


id: GO:0006892
data:
  {"annotated_genes":["SJAG_04338","SJAG_03970","SJAG_00858","SJAG_03838","SJAG_01809","SJAG_02453","SJAG_02443","SJAG_01645","SJAG_04902","SJAG_03864","SJAG_02240","SJAG_01945","SJAG_01598","SJAG_03746","SJAG_04044","SJAG_02753","SJAG_03754","SJAG_04358","SJAG_00669","SJAG_03005","SJAG_00380","SJAG_02282","SJAG_03938","SJAG_00108","SJAG_01335","SJAG_00144","SJAG_03072","SJAG_01114","SJAG_02320","SJAG_00826","SJAG_03347","SJAG_04023","SJAG_04112","SJAG_02177","SJAG_02912","SJAG_00916","SJAG_02231","SJAG_04931","SJAG_03137","SJAG_03848","SJAG_01516","SJAG_03142","SJAG_01324","SJAG_03756","SJAG_00330","SJAG_03963","SJAG_04609","SJAG_02166","SJAG_03726","SJAG_01027","SJAG_04966","SJAG_03357","SJAG_02811","SJAG_00430","SJAG_01488","SJAG_02587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90365,93685,96309,106788,108605],"is_not":false,"summary":null,"term":"GO:0006892"},{"annotations":[114504,85309,97236,113066,114574,96429,100182,96024,96370,103477,91025,88409,109118,97680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006895"},{"annotations":[104905,87303,103150,102511,103254,105695,91277,109119,94838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[109980,95667,84795,103495,102392,96025,111744,113809,88396,95877,86895,96964,114903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006893"},{"annotations":[85072,105286,93011,91915,96026,97563,103478,95630,90317,86724,92263,93285,104906,105915,100183,106375,107605,104792,88410,113633,114951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006896"},{"annotations":[84262],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00144":null,"SJAG_00330":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00669":null,"SJAG_00826":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01027":null,"SJAG_01114":null,"SJAG_01324":null,"SJAG_01335":null,"SJAG_01488":null,"SJAG_01516":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_01945":null,"SJAG_02166":null,"SJAG_02177":null,"SJAG_02231":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02320":null,"SJAG_02443":null,"SJAG_02453":null,"SJAG_02587":null,"SJAG_02753":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03142":null,"SJAG_03347":null,"SJAG_03357":null,"SJAG_03726":null,"SJAG_03746":null,"SJAG_03754":null,"SJAG_03756":null,"SJAG_03838":null,"SJAG_03848":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_03963":null,"SJAG_03970":null,"SJAG_04023":null,"SJAG_04044":null,"SJAG_04112":null,"SJAG_04338":null,"SJAG_04358":null,"SJAG_04609":null,"SJAG_04902":null,"SJAG_04931":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"post-Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"post-Golgi transport","type":"exact"}],"termid":"GO:0006892","terms_by_termid":{"GO:0006892":null,"GO:0006893":null,"GO:0006895":null,"GO:0006896":null,"GO:0042997":null,"GO:0043001":null}}


id: PBO:0050507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C6","termid":"PBO:0050507"}


id: PBO:0051088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 1","termid":"PBO:0051088"}


id: PBO:0091781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious protein, reverse strand of sno20","termid":"PBO:0091781"}


id: GO:0033992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-anhydro-D-fructose = 1,5-anhydro-4-deoxy-D-glycero-hex-3-en-2-ulose + H2O.","definition_xrefs":["EC:4.2.1.111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose dehydratase activity","secondary_identifiers":["RHEA:15725","MetaCyc:4.2.1.111-RXN"],"synonyms":[{"name":"1,5-anhydro-D-arabino-hex-2-ulose dehydratase activity","type":"related"},{"name":"1,5-anhydro-D-fructose 4-dehydratase activity","type":"related"},{"name":"1,5-anhydro-D-fructose hydro-lyase (ascopyrone-M-forming) activity","type":"related"},{"name":"1,5-anhydro-D-fructose hydro-lyase activity","type":"related"},{"name":"1,5-anhydro-D-fructose hydrolyase activity","type":"related"},{"name":"AF dehydratase activity","type":"related"},{"name":"AFDH","type":"related"}],"termid":"GO:0033992"}


id: GO:1905652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of artery morphogenesis.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:27389411","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"is_a","term_name":"negative regulation of blood vessel morphogenesis","termid":"GO:2000181"},{"relation_name":"negatively_regulates","term_name":"artery morphogenesis","termid":"GO:0048844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of artery morphogenesis","synonyms":[{"name":"down regulation of arterial morphogenesis","type":"exact"},{"name":"down regulation of arteriogenesis","type":"exact"},{"name":"down regulation of artery morphogenesis","type":"exact"},{"name":"down-regulation of arterial morphogenesis","type":"exact"},{"name":"down-regulation of arteriogenesis","type":"exact"},{"name":"down-regulation of artery morphogenesis","type":"exact"},{"name":"downregulation of arterial morphogenesis","type":"exact"},{"name":"downregulation of arteriogenesis","type":"exact"},{"name":"downregulation of artery morphogenesis","type":"exact"},{"name":"inhibition of arterial morphogenesis","type":"narrow"},{"name":"inhibition of arteriogenesis","type":"narrow"},{"name":"inhibition of artery morphogenesis","type":"narrow"},{"name":"negative regulation of arterial morphogenesis","type":"exact"},{"name":"negative regulation of arteriogenesis","type":"exact"}],"termid":"GO:1905652"}


id: PBO:0082887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; interacts with Pho85p cyclin-dependent kinase (Cdk) to phosphorylate and regulate glycogen synthase, also activates Pho85p for Glc8p phosphorylation; PCL8 has a paralog, PCL10, that arose from the whole genome duplication","termid":"PBO:0082887"}


id: PBO:0072084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 14","termid":"PBO:0072084"}


id: SO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operon whose transcription is coordinated on several mutually overlapping transcription units transcribed in the same direction and sharing at least one gene.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"operon","termid":"SO:0000178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_operon","synonyms":[{"name":"complex operon","type":"exact"}],"termid":"SO:0002299"}


id: PBO:0049039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 31","termid":"PBO:0049039"}


id: GO:0047675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinonate = 2-dehydro-3-deoxy-D-arabinonate + H2O.","definition_xrefs":["EC:4.2.1.5","RHEA:21836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"arabinonate dehydratase activity","secondary_identifiers":["MetaCyc:ARABINONATE-DEHYDRATASE-RXN","KEGG_REACTION:R03032"],"synonyms":[{"name":"D-arabinonate hydro-lyase (2-dehydro-3-deoxy-D-arabinonate-forming)","type":"related"},{"name":"D-arabinonate hydro-lyase activity","type":"related"}],"termid":"GO:0047675"}


id: PBO:0091712
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facilitates Rad51 assembly at damage sites independently of Rad57","termid":"PBO:0091712"}


id: PBO:0109227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF3 pseudogene 1","termid":"PBO:0109227"}


id: PBO:0083761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential kinetochore protein; component of the CBF3 complex that binds the CDEIII region of the centromere; contains an N-terminal Zn2Cys6 type zinc finger domain, a C-terminal acidic domain, and a putative coiled coil dimerization domain","termid":"PBO:0083761"}


id: SO:0001195
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of (R)-GNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"R_GNA","termid":"SO:0001194"},{"relation_name":"is_a","term_name":"GNA_oligo","termid":"SO:0001193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R_GNA_oligo","synonyms":[{"name":"(R)-glycerol nucleic acid","type":"exact"},{"name":"(R)-glycol nucleic acid","type":"exact"},{"name":"R GNA oligo","type":"exact"}],"termid":"SO:0001195"}


id: GO:0106344
data:
  {"annotated_genes":["SJAG_04866"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110120],"is_not":false,"summary":null,"term":"GO:0106344"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe(3+) + 4 H2O + L-histidyl-[4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase] + N(6)-(pyridoxal phosphate)-L-lysyl-[4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase] = (2S)-2-amino-5-hydroxy-4-oxopentanoyl-[4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase] + 3-oxopropanoate + 4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine + 2 Fe(2+) + 2 H+ + L-lysyl-[4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase].","definition_xrefs":["RHEA:65756","PMID:22568620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase activity from histidine and PLP","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106344","terms_by_termid":{"GO:0106344":null}}


id: PR:P28040
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase alpha catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10322:SF3","PRO:DNx","OMA:SCHPO01433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.06c","secondary_identifiers":["UniProtKB:P28040"],"synonyms":[{"name":"DNA polymerase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLA1","type":"exact"}],"termid":"PR:P28040"}


id: PBO:0041949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby family member 1, beta catenin antagonist","termid":"PBO:0041949"}


id: FYPO:0000425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of endocytosis is increased. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased endocytosis during vegetative growth","synonyms":[{"name":"endocytosis: increased during vegetative growth","type":"related"},{"name":"increased actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"increased endocytosis during mitotic cell cycle","type":"related"},{"name":"increased protein internalization during vegetative growth","type":"narrow"}],"termid":"FYPO:0000425"}


id: FYPO:0005565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of microtubule bundles is abnormal when the cell undergoes transition from G0 phase to G1.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule bundle during G0 to G1 transition","synonyms":[{"name":"abnormal MT bundle during G0 to G1 transition","type":"exact"},{"name":"abnormal microtubule array during G0 to G1 transition","type":"related"},{"name":"abnormal microtubule bundle during cell cycle re-entry","type":"exact"},{"name":"abnormal microtubule bundle during cell quiescence to G1 transition","type":"exact"},{"name":"abnormal microtubule bundle during exit from cell quiescence","type":"exact"},{"name":"abnormal microtubule bundle during quiescence to G1 transition","type":"exact"},{"name":"abnormal microtubule bundle during recovery from quiescence","type":"exact"},{"name":"abnormal microtubule bundle physical object quality during G0 to G1 transition","type":"exact"}],"termid":"FYPO:0005565"}


id: PATO:0001429
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An medium acidity quality inhering in a solution by virtue of the bearer's a high concentration of H+ ions.","definition_xrefs":["chemicool:chemicool"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medium acidity","termid":"PATO:0001428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic","termid":"PATO:0001429"}


id: FYPO:0003140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0003140)","synonyms":[{"name":"decreased peptidyl-tyrosine phosphorylation during cellular response to heat","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased tyrosine phosphorylation during cellular response to heat","type":"exact"},{"name":"reduced protein tyrosine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003140"}


id: GO:0075249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of aeciospore formation","termid":"GO:0075248"},{"relation_name":"positively_regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aeciospore formation","termid":"GO:0075249"}


id: PBO:0065304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 21","termid":"PBO:0065304"}


id: PBO:0113225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent short-chain aldehyde reductase; involved in detoxification of furfural; expression is upregulated in cells treated with the aldehydes furfural and glycolaldehyde, the mycotoxin patulin, and also the quinone methide triterpene celastrol; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0113225"}


id: RO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"definition \\\"x has gene product of y if and only if y is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from x\\\"","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_of","termid":"RO:0002204"}


id: PBO:0031023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_concentration_of_M-factor_in_growth_medium","termid":"PBO:0031023"}


id: PBO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP phosphoribosyltransferase","termid":"PBO:0002458"}


id: GO:0072327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a nematode vulval cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed adult vulva, which is the egg-laying organ of female and hermaphrodite nematodes.","definition_xrefs":["GOC:mah","GOC:kmv","ISBN:087969307X","PMID:11236714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"vulval cell fate commitment","termid":"GO:0072325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vulval cell fate specification","termid":"GO:0072327"}


id: PBO:0038680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 5 pseudogene 1","termid":"PBO:0038680"}


id: GO:0062186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the epoxidation of double bonds of the arachidonoyl moiety of anandamide.","definition_xrefs":["PMID:21289075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"anandamide epoxidase activity","synonyms":[{"name":"arachidonoylethanolamide epoxidase activity","type":"exact"}],"termid":"GO:0062186"}


id: PR:O59785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC320.08 gene.","definition_xrefs":["UniProtKB:O59785","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized solute carrier family 35 member C320.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.08","synonyms":[{"name":"Spom972h-SPCC320.08","type":"exact"}],"termid":"PR:O59785"}


id: PR:O60085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionine aminopeptidase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03176","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.03","secondary_identifiers":["UniProtKB:O60085"],"synonyms":[{"name":"MAP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MetAP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-METAP2","type":"exact"},{"name":"peptidase M (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60085"}


id: PBO:0069147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 398, pseudogene","termid":"PBO:0069147"}


id: PBO:0001865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein (predicted)","termid":"PBO:0001865"}


id: PBO:0108933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MND1 pseudogene 1","termid":"PBO:0108933"}


id: GO:1904893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor signaling via STAT.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:rjd","PMID:24587195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via STAT","termid":"GO:1904892"},{"relation_name":"negatively_regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of receptor signaling pathway via STAT","synonyms":[{"name":"down regulation of STAT cascade","type":"exact"},{"name":"down regulation of STAT signalling pathway","type":"exact"},{"name":"down regulation of kinase activated-STAT cascade","type":"exact"},{"name":"down regulation of kinase-STAT cascade","type":"exact"},{"name":"down-regulation of STAT cascade","type":"exact"},{"name":"down-regulation of STAT signalling pathway","type":"exact"},{"name":"down-regulation of kinase activated-STAT cascade","type":"exact"},{"name":"down-regulation of kinase-STAT cascade","type":"exact"},{"name":"downregulation of STAT cascade","type":"exact"},{"name":"downregulation of STAT signalling pathway","type":"exact"},{"name":"downregulation of kinase activated-STAT cascade","type":"exact"},{"name":"downregulation of kinase-STAT cascade","type":"exact"},{"name":"inhibition of STAT cascade","type":"narrow"},{"name":"inhibition of STAT signalling pathway","type":"narrow"},{"name":"inhibition of kinase activated-STAT cascade","type":"narrow"},{"name":"inhibition of kinase-STAT cascade","type":"narrow"},{"name":"negative regulation of STAT signalling pathway","type":"exact"},{"name":"negative regulation of kinase activated-STAT cascade","type":"exact"},{"name":"negative regulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904893"}


id: GO:1905084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrial translational elongation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25738458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational elongation","termid":"GO:0045901"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translational elongation","termid":"GO:1905082"},{"relation_name":"positively_regulates","term_name":"mitochondrial translational elongation","termid":"GO:0070125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mitochondrial translational elongation","synonyms":[{"name":"activation of mitochondrial translation elongation","type":"narrow"},{"name":"activation of mitochondrial translational elongation","type":"narrow"},{"name":"positive regulation of mitochondrial translation elongation","type":"exact"},{"name":"up regulation of mitochondrial translation elongation","type":"exact"},{"name":"up regulation of mitochondrial translational elongation","type":"exact"},{"name":"up-regulation of mitochondrial translation elongation","type":"exact"},{"name":"up-regulation of mitochondrial translational elongation","type":"exact"},{"name":"upregulation of mitochondrial translation elongation","type":"exact"},{"name":"upregulation of mitochondrial translational elongation","type":"exact"}],"termid":"GO:1905084"}


id: PBO:0075468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 19","termid":"PBO:0075468"}


id: GO:0007547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The events determining the germ-line sexual phenotype after the initial transmission of that phenotype to germ-line-specific information pathways.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processes downstream of sex determination signal","termid":"GO:0007545"},{"relation_name":"part_of","term_name":"germ-line sex determination","termid":"GO:0018992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line processes downstream of sex determination signal","termid":"GO:0007547"}


id: PBO:0057179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 330","termid":"PBO:0057179"}


id: MOD:00046
data:
  {"annotated_genes":["SJAG_02763","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115164,115165,115166,115167,115625,115626],"is_not":false,"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-phospho-L-serine.","definition_xrefs":["OMSSA:6","PubMed:12923550","PubMed:8061611","Unimod:21#S","RESID:AA0037","PubMed:4065410","DeltaMass:0","ChEBI:15811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 166.98-167.00 Da","termid":"MOD:00771"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"O-phosphorylated residue","termid":"MOD:01455"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phospho-L-serine","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"synonyms":[{"name":"(2S)-2-amino-3-(phosphonooxy)propanoic acid","type":"exact"},{"name":"2-amino-3-hydroxypropanoic acid 3-phosphate","type":"exact"},{"name":"2-azanyl-3-(phosphonooxy)propanoic acid","type":"exact"},{"name":"ACT_SITE Phosphoserine intermediate","type":"exact"},{"name":"MOD_RES Phosphoserine","type":"exact"},{"name":"O-phospho-L-serine","type":"exact"},{"name":"O-phosphonoserine","type":"exact"},{"name":"O-phosphorylated L-serine","type":"exact"},{"name":"O3-phosphoserine","type":"exact"},{"name":"OPSer","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phospho Seryl","type":"exact"},{"name":"Phosphorylation","type":"related"},{"name":"phosphorylations","type":"exact"},{"name":"serine phosphate ester","type":"exact"}],"termid":"MOD:00046","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: PBO:0056101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 6","termid":"PBO:0056101"}


id: PR:Q10302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.09","synonyms":[{"name":"Spom972h-SPAC22H10.09","type":"exact"}],"termid":"PR:Q10302"}


id: GO:0047772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carboxymethoxysuccinate = fumarate + glycolate.","definition_xrefs":["RHEA:12336","EC:4.2.99.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"carboxymethyloxysuccinate lyase activity","secondary_identifiers":["MetaCyc:CARBOXYMETHYLOXYSUCCINATE-LYASE-RXN","KEGG_REACTION:R01336"],"synonyms":[{"name":"carboxymethyloxysuccinate glycolate-lyase (fumarate-forming)","type":"related"},{"name":"carboxymethyloxysuccinate glycolate-lyase activity","type":"related"}],"termid":"GO:0047772"}


id: PBO:0044701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 X-linked","termid":"PBO:0044701"}


id: GO:0022032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of telencephalon oligodendrocyte cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:jid","GOC:dph","GOC:dgh","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon oligodendrocyte cell migration","termid":"GO:0022032"}


id: MOD:01906
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to dehydromethionine.","definition_xrefs":["PubMed:19775156","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydromethionine","synonyms":[{"name":"(3S)-3-carboxy-1-methylisothiazolidin-1-ium","type":"exact"},{"name":"L-dehydromethionine","type":"exact"}],"termid":"MOD:01906"}


id: PBO:0091368
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency of long tract gene conversion in the rad57delta single mutant was suppressed in the swi5delta rad57delta double mutant, to a level similar to that observed in the rad51 mutant","termid":"PBO:0091368"}


id: GO:0004631
data:
  {"annotated_genes":["SJAG_01474"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92725],"is_not":false,"summary":null,"term":"GO:0004631"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = (R)-5-diphosphomevalonate + ADP + H+.","definition_xrefs":["RHEA:16341","EC:2.7.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01474":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphomevalonate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191422","MetaCyc:PHOSPHOMEVALONATE-KINASE-RXN","KEGG_REACTION:R03245"],"synonyms":[{"name":"5-phosphomevalonate kinase activity","type":"related"},{"name":"ATP:(R)-5-phosphomevalonate phosphotransferase activity","type":"related"},{"name":"ATP:5-phosphomevalonate phosphotransferase activity","type":"related"},{"name":"mevalonate phosphate kinase activity","type":"related"},{"name":"mevalonate-5-phosphate kinase activity","type":"related"},{"name":"mevalonic acid phosphate kinase activity","type":"related"}],"termid":"GO:0004631","terms_by_termid":{"GO:0004631":null}}


id: GO:0051771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric-oxide synthase enzyme.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase biosynthetic process","termid":"GO:0051769"},{"relation_name":"negatively_regulates","term_name":"nitric-oxide synthase biosynthetic process","termid":"GO:0051767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric-oxide synthase biosynthetic process","secondary_identifiers":["GO:0051774"],"synonyms":[{"name":"down regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"down regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"down-regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"down-regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"downregulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"downregulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"inhibition of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"inhibition of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"negative regulation of NO synthase biosynthesis","type":"exact"},{"name":"negative regulation of NO synthase biosynthetic process","type":"exact"},{"name":"negative regulation of NOS biosynthesis","type":"exact"},{"name":"negative regulation of NOS biosynthetic process","type":"exact"},{"name":"negative regulation of NOS2 synthase biosynthesis","type":"narrow"},{"name":"negative regulation of NOS2 synthase biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"}],"termid":"GO:0051771"}


id: GO:0031152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the aggregate over time, from its formation to the point when a slug is formed. Aggregate development begins in response to starvation and continues by the chemoattractant-mediated movement of cells toward each other. The aggregate is a multicellular structure that gives rise to the slug.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","ISBN:0521583640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"socially cooperative development","termid":"GO:0099120"},{"relation_name":"part_of","term_name":"sorocarp development","termid":"GO:0030587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aggregation involved in sorocarp development","synonyms":[{"name":"aggregate development involved in sorocarp development","type":"exact"},{"name":"aggregation during fruiting body development","type":"exact"}],"termid":"GO:0031152"}


id: PBO:0083507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CCC2/YDR270W","termid":"PBO:0083507"}


id: PBO:0085676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in pre-mRNA splicing; component of the pre-spliceosome; associates with U2 snRNA; involved in ER to Golgi transport","termid":"PBO:0085676"}


id: PBO:0072497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 26","termid":"PBO:0072497"}


id: PBO:0075417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 4","termid":"PBO:0075417"}


id: GO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"RNA polymerase IV is a multisubunit RNA polymerase complex found in the nucleus of plants and involved in accumulation of siRNAs and in DNA methylation-dependent silencing of endogenous repeated sequences. Pol IV is composed of subunits that are paralogous or identical to the 12 subunits of Pol II. The largest and second-largest subunits of Pol IV are the catalytic subunits and share similarity with the corresponding subunits of other eukaryotic and bacterial multisubunit RNA polymerases. The second largest subunit is also found in RNA polymerase V, while the largest subunit is found only in RNAP IV complex.","definition_xrefs":["PMID:19110459","GOC:mtg_sensu","GOC:krc","PMID:16140984","PMID:15692015","PMID:15766525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase IV complex","secondary_identifiers":["GO:0000420"],"synonyms":[{"name":"DNA-directed RNA polymerase IV complex","type":"exact"},{"name":"DNA-directed RNA polymerase IVa complex","type":"exact"}],"termid":"GO:0000418"}


id: GO:0000261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out). Found in vacuoles of eukaryotes and in bacteria.","definition_xrefs":["TC:3.A.2.2.2"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium-translocating V-type ATPase activity (obsolete GO:0000261)","synonyms":[{"name":"sodium-translocating V-type ATPase activity","type":"exact"}],"termid":"GO:0000261"}


id: GO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a tumor cell is received and converted into a molecular signal.","definition_xrefs":["ISBN:0781735149","PMID:16730260","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"detection of biotic stimulus","termid":"GO:0009595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of tumor cell","termid":"GO:0002355"}


id: GO:0015772
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[91901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of oligosaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligosaccharides are molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transport","termid":"GO:0008643"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"oligosaccharide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015772","terms_by_termid":{"GO:0106081":null,"GO:0106082":null}}


id: GO:0042624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction is not directly coupled to any other reaction.","definition_xrefs":["PMID:12912988"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase activity, uncoupled (obsolete GO:0042624)","termid":"GO:0042624"}


id: GO:0050126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoylputrescine + H2O + 2 H+ = CO2 + NH4 + putrescine.","definition_xrefs":["EC:3.5.1.53","RHEA:22284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"N-carbamoylputrescine amidase activity","secondary_identifiers":["MetaCyc:N-CARBAMOYLPUTRESCINE-AMIDASE-RXN","KEGG_REACTION:R01152"],"synonyms":[{"name":"N-carbamoylputrescine amidohydrolase activity","type":"related"},{"name":"NCP","type":"related"},{"name":"carbamoylputrescine hydrolase activity","type":"related"}],"termid":"GO:0050126"}


id: GO:0032019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prominent mass in the cytoplasm of previtellogenic oocytes. The cloud contains both mitochondria and electron-dense granulofibrillar material (GFM) and is the source of germinal granule material.","definition_xrefs":["PMID:6541166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial cloud","synonyms":[{"name":"Balbiani body","type":"exact"},{"name":"mitochondrial aggregate","type":"related"}],"termid":"GO:0032019"}


id: FYPO:0001075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing papulacandin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on papulacandin B","synonyms":[{"name":"normal cell population growth in presence of papulacandin B","type":"exact"},{"name":"normal cell population growth on papulacandin B","type":"exact"},{"name":"normal cellular response to papulacandin B","type":"related"},{"name":"normal vegetative cell population growth on papulacandin B","type":"exact"}],"termid":"FYPO:0001075"}


id: PBO:0001238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHA domain protein Tos4 (predicted)","termid":"PBO:0001238"}


id: PBO:0064968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 22","termid":"PBO:0064968"}


id: PBO:0066437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"resistin","termid":"PBO:0066437"}


id: FYPO:0005169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at the centromere central core occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at centromere central core during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 methylation at centromere central core during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at centromere central core during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0005169"}


id: FYPO:0000121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal sporulation","synonyms":[{"name":"abnormal ascospore formation","type":"exact"},{"name":"sporulation defects","type":"exact"},{"name":"sporulation: abnormal","type":"related"}],"termid":"FYPO:0000121"}


id: PBO:0082764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the small-subunit (SSU) processome; SSU processome is involved in the biogenesis of the 18S rRNA","termid":"PBO:0082764"}


id: GO:0018948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylene metabolic process","synonyms":[{"name":"xylene metabolism","type":"exact"}],"termid":"GO:0018948"}


id: PATO:0000493
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000493 amplitude value (obsolete PATO:0000493)","termid":"PATO:0000493"}


id: PBO:0070821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13","termid":"PBO:0070821"}


id: PR:P87238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cue1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain-containing protein 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.13c","synonyms":[{"name":"Spom972h-cue1","type":"exact"}],"termid":"PR:P87238"}


id: PBO:0005544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA export factor Rsm1","termid":"PBO:0005544"}


id: PBO:0084149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity maltose transporter (alpha-glucoside transporter); inducible; encoded in the MAL1 complex locus; broad substrate specificity that includes maltotriose; required for isomaltose utilization","termid":"PBO:0084149"}


id: GO:0008627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to changes in intracellular ion homeostasis, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["PMID:16483738","GOC:mtg_apoptosis","PMID:11454444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to osmotic stress","synonyms":[{"name":"induction of apoptosis by ionic changes","type":"related"}],"termid":"GO:0008627"}


id: PBO:0045108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophin","termid":"PBO:0045108"}


id: GO:1903907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plasma membrane raft polarization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:als","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of plasma membrane raft polarization","termid":"GO:1903906"},{"relation_name":"negatively_regulates","term_name":"plasma membrane raft polarization","termid":"GO:0044858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of plasma membrane raft polarization","synonyms":[{"name":"down regulation of plasma membrane raft polarization","type":"exact"},{"name":"down-regulation of plasma membrane raft polarization","type":"exact"},{"name":"downregulation of plasma membrane raft polarization","type":"exact"},{"name":"inhibition of plasma membrane raft polarization","type":"narrow"}],"termid":"GO:1903907"}


id: PBO:0074758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 117","termid":"PBO:0074758"}


id: PR:O14027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal 5'-phosphate synthase subunit PDX1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.04","synonyms":[{"name":"PLP synthase subunit PDX1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snz1","type":"exact"}],"termid":"PR:O14027"}


id: PBO:0063741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 6","termid":"PBO:0063741"}


id: PBO:0081302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 84","termid":"PBO:0081302"}


id: PBO:0059387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S23","termid":"PBO:0059387"}


id: GO:0042942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which of D-serine, the D-enantiomer of 2-amino-3-hydroxypropanoic acid is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jsg","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"D-serine transmembrane transport","termid":"GO:0042942"}


id: FYPO:0006139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2-myristoylglycerophosphocholine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:28667014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular 2-myristoylglycerophosphocholine level","synonyms":[{"name":"increased 2-myristoylglycerophosphocholine accumulation","type":"related"},{"name":"increased cellular 2-myristoylglycerophosphocholine level during mitotic cell cycle","type":"related"},{"name":"increased cellular 2-myristoylglycerophosphocholine level during vegetative growth","type":"exact"},{"name":"increased cellular 2-tetradecanoyl-sn-glycero-3-phosphocholine level","type":"exact"}],"termid":"FYPO:0006139"}


id: PBO:0029620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP-dependent_3'-5'_DNA_helicase_activity","termid":"PBO:0029620"}


id: GO:2000231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic stellate cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast proliferation","termid":"GO:0048146"},{"relation_name":"is_a","term_name":"regulation of pancreatic stellate cell proliferation","termid":"GO:2000229"},{"relation_name":"positively_regulates","term_name":"pancreatic stellate cell proliferation","termid":"GO:0072343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic stellate cell proliferation","termid":"GO:2000231"}


id: GO:0070609
data:
  {"annotated_genes":["SJAG_02278","SJAG_00424","SJAG_04666","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85594,88548,91067,98967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070607"},{"relation_name":"regulates","term_name":"fungal-type cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070599"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of fungal-type cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ascospore wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"regulation of ascospore wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"regulation of ascospore wall alpha-1,3 glucan metabolism","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan metabolic process","type":"exact"}],"termid":"GO:0070609","terms_by_termid":{"GO:0070610":null}}


id: GO:0031001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brefeldin A stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to brefeldin A","termid":"GO:0031001"}


id: PBO:0068373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 166","termid":"PBO:0068373"}


id: GO:0005946
data:
  {"annotated_genes":["SJAG_01862","SJAG_01427","SJAG_04859","SJAG_00129","SJAG_01531","SJAG_00182","SJAG_01646"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73481,87973,89461,92651,93273,97173,107614],"is_not":false,"summary":null,"term":"GO:0005946"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses alpha,alpha-trehalose-phosphate synthase (UDP-forming) and trehalose-phosphatase activities, and thus catalyzes two reactions in trehalose biosynthesis. In the complex identified in Saccharomyces, Tps1p has alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity, Tps2p has trehalose 6-phosphate phosphatase activity; Tps3p is a regulatory subunit, and an additional subunit, Tsl1p, may be present.","definition_xrefs":["PMID:9837904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"UDP-glucose-glucosephosphate glucosyltransferase complex","type":"exact"},{"name":"trehalose-6-phosphate synthase complex","type":"exact"},{"name":"trehalose-6-phosphate synthase/phosphatase","type":"exact"}],"termid":"GO:0005946","terms_by_termid":{"GO:0005946":null}}


id: FYPO:0003856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to FR901464. Cells stop growing (and may die) at a concentration of FR901464 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to FR901464","synonyms":[{"name":"hypersensitive to FR901464","type":"exact"},{"name":"sensitive to FR901464 during mitotic cell cycle","type":"related"},{"name":"sensitive to FR901464 during vegetative growth","type":"exact"}],"termid":"FYPO:0003856"}


id: PBO:0077487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 207","termid":"PBO:0077487"}


id: PBO:0078897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 8-1","termid":"PBO:0078897"}


id: PBO:0051405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 5","termid":"PBO:0051405"}


id: PBO:0063465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor like","termid":"PBO:0063465"}


id: PBO:0004775
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBP Cleavage activating Protein","termid":"PBO:0004775"}


id: GO:0047218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumarate + UDP-D-glucose = 4-O-beta-D-glucosyl-4-hydroxycinnamate + UDP.","definition_xrefs":["MetaCyc:2.4.1.126-RXN","EC:2.4.1.126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"hydroxycinnamate 4-beta-glucosyltransferase activity","secondary_identifiers":["RHEA:21636"],"synonyms":[{"name":"UDP-glucose-hydroxycinnamate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:trans-4-hydroxycinnamate 4-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:trans-4-hydroxycinnamate 4-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"hydroxycinnamoyl glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-hydroxycinnamate glucosyltransferase activity","type":"related"}],"termid":"GO:0047218"}


id: PBO:0018117
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translin-associated Factor X","termid":"PBO:0018117"}


id: GO:0047988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxybutanoate + 2-oxoglutarate = acetoacetate + (R)-2-hydroxyglutarate.","definition_xrefs":["EC:1.1.99.24","MetaCyc:HYDROXYACID-OXOACID-TRANSHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxyacid-oxoacid transhydrogenase activity","secondary_identifiers":["Reactome:R-HSA-880033","Reactome:R-HSA-880002"],"synonyms":[{"name":"(S)-3-hydroxybutanoate:2-oxoglutarate oxidoreductase activity","type":"related"},{"name":"transhydrogenase, hydroxy acid-oxo acid","type":"related"}],"termid":"GO:0047988"}


id: PBO:0069918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1210, pseudogene","termid":"PBO:0069918"}


id: GO:0021888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a hypothalamus gonadotrophin-releasing hormone neuron over time, from initial commitment of its fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:cls","GO_REF:0000021","PMID:12626695","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron development","termid":"GO:0021884"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","termid":"GO:0021886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron development","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron development","type":"related"}],"termid":"GO:0021888"}


id: PBO:0061482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRG1 intronic transcript 3","termid":"PBO:0061482"}


id: PBO:0000272
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.19","termid":"PBO:0000272"}


id: GO:0010701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of norepinephrine secretion","termid":"GO:0014061"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine secretion","termid":"GO:0033605"},{"relation_name":"positively_regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of norepinephrine secretion","termid":"GO:0010701"}


id: FYPO:0001205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which alpha-glucosidase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal alpha-glucosidase activity","termid":"FYPO:0001183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished alpha-glucosidase activity","synonyms":[{"name":"alpha-glucosidase activity abolished","type":"exact"}],"termid":"FYPO:0001205"}


id: PBO:0079585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D1","termid":"PBO:0079585"}


id: GO:0140881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of the fungal metabolite terrein.","definition_xrefs":["PMID:25852654","PMID:24816227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"terrein biosynthetic process","termid":"GO:0140880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation terrein biosynthetic process","termid":"GO:0140881"}


id: PATO:0000750
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000750 learning and memory value (obsolete PATO:0000750)","termid":"PATO:0000750"}


id: PBO:0077123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMP metallopeptidase inhibitor 2","termid":"PBO:0077123"}


id: PBO:0087918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor required for septum destruction after cytokinesis; part of the RAM network that regulates polarity and morphogenesis; NES phosphorylation by RAM network kinase Cbk1p blocks nuclear exit in mother cells during the M/G1 transition, causing asymmetric localization to daughter cell nuclei, and increased Ace2p activity; phosphorylation by Cdc28p and Pho85p prevents nuclear import during cell cycle phases other than cytokinesis; Spt16p is required for nuclear exclusion during G1","termid":"PBO:0087918"}


id: GO:0090549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of a carbon source.","definition_xrefs":["GOC:tair_curators","PMID:18245858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbon starvation","termid":"GO:0090549"}


id: GO:0036196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving zymosterol, (5alpha-cholesta-8,24-dien-3beta-ol).","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"zymosterol metabolic process","termid":"GO:0036196"}


id: PBO:0040495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A and ninein interacting protein","termid":"PBO:0040495"}


id: GO:0007120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of defining the next site of bud emergence adjacent to the last site of bud emergence on a budding cell.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud site selection","termid":"GO:0000282"},{"relation_name":"is_a","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000281","GO:0007163"],"is_obsolete":false,"name":"axial cellular bud site selection","synonyms":[{"name":"axial bud site selection","type":"exact"},{"name":"axial budding","type":"broad"}],"termid":"GO:0007120"}


id: PBO:0078965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 4-1","termid":"PBO:0078965"}


id: GO:0061230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric juxtaglomerulus cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell fate commitment","termid":"GO:0072150"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerulus cell differentiation","termid":"GO:0061207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric juxtaglomerulus cell fate commitment","termid":"GO:0061230"}


id: RO:HOM0000043
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that is based on distant shared ancestry.","definition_xrefs":["ISBN:978-0252068140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_plesiomorphy_relationship_with","synonyms":[{"name":"plesiomorphous to","type":"exact"},{"name":"symplesiomorphy","type":"related"}],"termid":"RO:HOM0000043"}


id: PBO:0045969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early growth response 2","termid":"PBO:0045969"}


id: GO:0090337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.","definition_xrefs":["PMID:12810699","PMID:15923184","GOC:tb","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"regulates","term_name":"formin-nucleated actin cable assembly","termid":"GO:0070649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of formin-nucleated actin cable assembly","termid":"GO:0090337"}


id: PBO:0003424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf25","termid":"PBO:0003424"}


id: GO:0009980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of C-terminal glutamate residues from a wide range of N-acylating groups, including peptidyl, aminoacyl, benzoyl, benzyloxycarbonyl, folyl and pteroyl groups.","definition_xrefs":["MetaCyc:3.4.17.11-RXN","EC:3.4.17.11"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate carboxypeptidase activity (obsolete GO:0009980)","synonyms":[{"name":"N-pteroyl-L-glutamate hydrolase activity","type":"related"},{"name":"carboxypeptidase G activity","type":"broad"},{"name":"carboxypeptidase G1 activity","type":"related"},{"name":"carboxypeptidase G2 activity","type":"related"},{"name":"glutamate carboxypeptidase activity","type":"exact"},{"name":"glutamyl carboxypeptidase activity","type":"related"}],"termid":"GO:0009980"}


id: GO:0055077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables the transport of a solute across a membrane via a gap junction hemi-channel. Two gap junction hemi-channels coupled together form a complete gap junction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wide pore channel activity","termid":"GO:0022829"},{"relation_name":"part_of","term_name":"gap junction channel activity","termid":"GO:0005243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"part_of","termid":"GO:0005215"},{"rel_name":"part_of","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"gap junction hemi-channel activity","synonyms":[{"name":"connexon channel activity","type":"exact"}],"termid":"GO:0055077"}


id: PBO:0072042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 12","termid":"PBO:0072042"}


id: GO:0018836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alkylmercury + H+ = an alkane + Hg2+.","definition_xrefs":["RHEA:18777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"alkylmercury lyase activity","secondary_identifiers":["MetaCyc:ALKYLMERCURY-LYASE-RXN","UM-BBD_enzymeID:e0055","EC:4.99.1.2"],"synonyms":[{"name":"alkylmercury mercuric-lyase (alkane-forming)","type":"related"},{"name":"alkylmercury mercuric-lyase activity","type":"related"},{"name":"organomercurial lyase activity","type":"related"},{"name":"organomercury lyase activity","type":"related"}],"termid":"GO:0018836"}


id: GO:1902904
data:
  {"annotated_genes":["SJAG_00279","SJAG_01993","SJAG_03455","SJAG_04982","SJAG_01894","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88447,84431,95019,110427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[87019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[93859,110430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibril organization.","definition_xrefs":["PMID:23921388","GO_REF:0000058","GOC:PARL","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"negatively_regulates","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_03455":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of supramolecular fiber organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of fibril organisation","type":"related"},{"name":"down regulation of fibril organization","type":"related"},{"name":"down-regulation of fibril organisation","type":"related"},{"name":"down-regulation of fibril organization","type":"related"},{"name":"downregulation of fibril organisation","type":"related"},{"name":"downregulation of fibril organization","type":"related"},{"name":"inhibition of fibril organisation","type":"narrow"},{"name":"inhibition of fibril organization","type":"narrow"},{"name":"negative regulation of fibril organisation","type":"related"}],"termid":"GO:1902904","terms_by_termid":{"GO:0034316":null,"GO:0042989":null,"GO:0051016":null}}


id: GO:0070126
data:
  {"annotated_genes":["SJAG_03232","SJAG_00308","SJAG_05221","SJAG_00286","SJAG_01518"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91632,92071,94776,98187,100807],"is_not":false,"summary":null,"term":"GO:0070126"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome in a mitochondrion, usually in response to a termination codon (note that mitochondria use variants of the universal genetic code that differ between different taxa).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational termination","termid":"GO:0006415"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00308":null,"SJAG_01518":null,"SJAG_03232":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"mitochondrial translational termination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial translation termination","type":"exact"}],"termid":"GO:0070126","terms_by_termid":{"GO:0070126":null}}


id: PBO:0065684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTTG1 interacting protein","termid":"PBO:0065684"}


id: GO:0061281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the connecting tubule of the mesonephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of mesonephric nephron tubule identity","termid":"GO:0061282"},{"relation_name":"is_a","term_name":"specification of connecting tubule identity","termid":"GO:0072085"},{"relation_name":"part_of","term_name":"mesonephric connecting tubule development","termid":"GO:0061272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric connecting tubule identity","synonyms":[{"name":"specification of mesonephric collecting tubule identity","type":"exact"}],"termid":"GO:0061281"}


id: GO:0047152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxybenzimidazolylcobamide + methanol = H2O + Co-methyl-Co-5-hydroxybenzimidazolylcob(I)amide.","definition_xrefs":["RHEA:45204","PMID:6438059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"methanol-5-hydroxybenzimidazolylcobamide Co-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.90-RXN","EC:2.1.1.90","GO:1990087"],"synonyms":[{"name":"MT 1","type":"related"},{"name":"MT1","type":"related"},{"name":"MtaB","type":"related"},{"name":"methanol cobalamin methyltransferase activity","type":"related"},{"name":"methanol-corrinoid protein Co-methyltransferase","type":"exact"},{"name":"methanol:5-hydroxybenzimidazolylcobamide Co-methyltransferase activity","type":"related"},{"name":"methanol:5-hydroxybenzimidazolylcobamide methyltransferase activity","type":"related"},{"name":"methanol:corrinoid methyltransferase activity","type":"exact"},{"name":"methyltransferase 1","type":"broad"}],"termid":"GO:0047152"}


id: GO:0002728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of natural killer cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immunity","termid":"GO:0002716"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of natural killer cell cytokine production","termid":"GO:0002727"},{"relation_name":"negatively_regulates","term_name":"natural killer cell cytokine production","termid":"GO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell cytokine production","synonyms":[{"name":"down regulation of natural killer cell cytokine production","type":"exact"},{"name":"down-regulation of natural killer cell cytokine production","type":"exact"},{"name":"downregulation of natural killer cell cytokine production","type":"exact"},{"name":"inhibition of natural killer cell cytokine production","type":"narrow"},{"name":"negative regulation of NK cell cytokine production","type":"exact"}],"termid":"GO:0002728"}


id: PBO:0064239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCXD2 antisense RNA 1","termid":"PBO:0064239"}


id: GO:0033485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyanidin 3-O-glucoside, a basic anthocyanin responsible for red to magenta coloration of flowers and fruits.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"cyanidin 3-O-glucoside metabolic process","termid":"GO:1901038"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"cyanidin 3-O-glucoside anabolism","type":"exact"},{"name":"cyanidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"cyanidin 3-O-glucoside formation","type":"exact"},{"name":"cyanidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033485"}


id: PBO:0062850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoancorin","termid":"PBO:0062850"}


id: GO:0008344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotory behavior in a fully developed and mature organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult locomotory behavior","synonyms":[{"name":"adult locomotory behaviour","type":"exact"}],"termid":"GO:0008344"}


id: GO:1901861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle tissue development.","definition_xrefs":["PMID:23150719","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle tissue development","termid":"GO:1901861"}


id: PBO:0034041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-partner_in","termid":"PBO:0034041"}


id: PBO:0067010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 18, pseudogene","termid":"PBO:0067010"}


id: GO:0045340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mercury ion (Hg2+).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0046872","GO:0003674"],"is_obsolete":false,"name":"mercury ion binding","synonyms":[{"name":"Hg ion binding","type":"exact"},{"name":"mercury binding","type":"exact"}],"termid":"GO:0045340"}


id: PBO:0066606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member U","termid":"PBO:0066606"}


id: PBO:0001838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn11","termid":"PBO:0001838"}


id: GO:1904336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ductus arteriosus closure.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16303610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ductus arteriosus closure","termid":"GO:1904335"},{"relation_name":"is_a","term_name":"negative regulation of artery morphogenesis","termid":"GO:1905652"},{"relation_name":"negatively_regulates","term_name":"ductus arteriosus closure","termid":"GO:0097070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ductus arteriosus closure","synonyms":[{"name":"down regulation of ductus arteriosus closure","type":"exact"},{"name":"down-regulation of ductus arteriosus closure","type":"exact"},{"name":"downregulation of ductus arteriosus closure","type":"exact"},{"name":"inhibition of ductus arteriosus closure","type":"narrow"}],"termid":"GO:1904336"}


id: PBO:0058474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5582","termid":"PBO:0058474"}


id: GO:0097451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal process of astrocyte that extends to the surface of the central nervous system. Together, glial limiting end-feet form the glial limiting membrane or glia limitans.","definition_xrefs":["NIF_Subcellular:sao181458425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte end-foot","termid":"GO:0097450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glial limiting end-foot","synonyms":[{"name":"glial limiting endfoot","type":"exact"}],"termid":"GO:0097451"}


id: GO:0140221
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Host-derived membrane of a pathogen-containing vacuole.","definition_xrefs":["PMID:10560000","PMID:26842840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"pathogen-containing vacuole","termid":"GO:0140220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pathogen-containing vacuole membrane","synonyms":[{"name":"pathogen inclusion membrane","type":"related"},{"name":"pathogen-containing compartment membrane","type":"exact"}],"termid":"GO:0140221"}


id: PBO:0083840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved kinetochore protein; part of multiple protein complexes, including the SCF ubiquitin ligase complex, the CBF3 complex that binds centromeric DNA, and the RAVE complex that regulates assembly of the V-ATPase; protein abundance increases in response to DNA replication stress","termid":"PBO:0083840"}


id: PBO:0086465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative methyltransferase; predicted to be involved in ribosome biogenesis; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; not an essential gene; YMR310C has a paralog, YGR283C, that arose from the whole genome duplication","termid":"PBO:0086465"}


id: GO:1900581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (17Z)-protosta-17(20),24-dien-3beta-ol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"tetracyclic triterpenoid biosynthetic process","termid":"GO:0010686"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"(17Z)-protosta-17(20),24-dien-3beta-ol metabolic process","termid":"GO:1900579"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"(17Z)-protosta-17(20),24-dien-3beta-ol biosynthetic process","synonyms":[{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol anabolism","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol biosynthesis","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol formation","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol synthesis","type":"exact"}],"termid":"GO:1900581"}


id: PBO:0041257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 216","termid":"PBO:0041257"}


id: PBO:0111859
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain","termid":"PBO:0111859"}


id: GO:0035052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of dorsal vessel cardioblast cells to an aortic cell fate and their capacity to differentiate into aortic cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:12397110","GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"embryonic heart tube anterior/posterior pattern specification","termid":"GO:0035054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal vessel aortic cell fate commitment","termid":"GO:0035052"}


id: GO:0035946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading messenger RNA (mRNA) within the mitochondrion.","definition_xrefs":["GOC:ans","PMID:19864255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"},{"relation_name":"is_a","term_name":"mitochondrial RNA surveillance","termid":"GO:2000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"mitochondrial mRNA surveillance","synonyms":[{"name":"mitochondrial aberrant RNA catabolic process","type":"exact"},{"name":"mitochondrial mRNA quality control","type":"exact"},{"name":"mitochondrial messenger RNA surveillance","type":"exact"}],"termid":"GO:0035946"}


id: PR:000045546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2B-alpha (Schizosaccharomyces pombe) that has been monoubiquitinated on the most C-terminal Lys residue. Example: UniProtKB:P04913-1, Lys-120, PR:000044771.","definition_xrefs":["PomBase:MAH","PRO:CNA","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B-alpha (Schizosaccharomyces pombe)","termid":"PR:000045547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"htb1/MonoUbiq(K119)","pombase_gene_id":"SPCC622.09","secondary_identifiers":["PR:000036916"],"synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2B-alpha ubiquitinated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-htb1/Ubiq:1","type":"exact"},{"name":"htb1/MonoUbiq(K119)","type":"exact"},{"name":"htb1/MonoUbiq:(K120)","type":"exact"},{"name":"uH2B","type":"related"}],"termid":"PR:000045546"}


id: PBO:0108936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 15","termid":"PBO:0108936"}


id: GO:0050786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RAGE receptor, the receptor for advanced glycation end-products.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RAGE receptor binding","synonyms":[{"name":"advanced glycation end-product receptor binding","type":"exact"}],"termid":"GO:0050786"}


id: PBO:0088046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme that regulates gluconeogenesis; negatively regulates gluconeogenesis by mediating the glucose-induced ubiquitination of fructose-1,6-bisphosphatase (FBPase); cytoplasmic enzyme that catalyzes the ubiquitination of histones in vitro","termid":"PBO:0088046"}


id: GO:0060219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell in a camera-type eye.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}


id: GO:0017120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of phosphatidylinositol-3-phosphate, phosphatidylinositol-4-phosphate, and phosphatidylinositol-3,5-bisphosphate, but not PI-4,5-bisphosphate, to phosphatidylinositol; PPIPase activity is a key regulator of membrane trafficking and actin cytoskeleton organization.","definition_xrefs":["PMID:10224048"],"gene_count":0,"genotype_count":0,"name":"obsolete polyphosphatidylinositol phosphatase activity (obsolete GO:0017120)","synonyms":[{"name":"polyphosphatidylinositol phosphatase activity","type":"exact"},{"name":"polyphosphoinositide phosphatase activity","type":"exact"}],"termid":"GO:0017120"}


id: GO:0015294
data:
  {"annotated_genes":["SJAG_04506","SJAG_04673","SJAG_04714","SJAG_01406","SJAG_03820","SJAG_04905","SJAG_03401","SJAG_02780","SJAG_04068","SJAG_03606","SJAG_02958","SJAG_03608","SJAG_03960","SJAG_03595","SJAG_02779","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88612,110284,113298,110277,106763,99100,72183,75255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[113302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[96796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[97778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[91902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[94182,88692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[101803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[88191,88185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[97781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[91903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[91672,84620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + cation(out) = solute(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transporter activity","termid":"GO:0008324"},{"relation_name":"is_a","term_name":"symporter activity","termid":"GO:0015293"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_01406":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03401":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04506":null,"SJAG_04673":null,"SJAG_04714":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"solute:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"solute:cation symporter activity","type":"broad"}],"termid":"GO:0015294","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0008506":null,"GO:0015295":null,"GO:0015366":null,"GO:0015379":null,"GO:0015505":null,"GO:0034216":null,"GO:0097434":null}}


id: PBO:0004668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Sap62","termid":"PBO:0004668"}


id: PBO:0045436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L2 pseudogene 4","termid":"PBO:0045436"}


id: PBO:0040198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 11","termid":"PBO:0040198"}


id: PBO:0076404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 2","termid":"PBO:0076404"}


id: PBO:0054548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1948","termid":"PBO:0054548"}


id: GO:0052818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: heteroglycan + GDP-mannose = (1->3)-alpha-D-mannosylheteroglycan + GDP.","definition_xrefs":["EC:2.4.1.48","MetaCyc:RXN-7992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heteroglycan alpha-mannosyltransferase activity","termid":"GO:0047264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"heteroglycan 3-alpha-mannosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03769"],"synonyms":[{"name":"GDP mannose 3-alpha-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:heteroglycan 3-alpha-D-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-heteroglycan 3-alpha-mannosyltransferase activity","type":"related"},{"name":"heteropolysaccharide 3-alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0052818"}


id: PBO:0074666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 52","termid":"PBO:0074666"}


id: PBO:0003049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrous iron transporter Pcl1","termid":"PBO:0003049"}


id: PBO:0050897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate filament family orphan 2","termid":"PBO:0050897"}


id: PBO:0055883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit A","termid":"PBO:0055883"}


id: GO:0061623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactose into pyruvate, with the concomitant production of a small amount of ATP.","definition_xrefs":["GOC:dph","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose catabolic process","termid":"GO:0019388"},{"relation_name":"is_a","term_name":"glycolytic process through glucose-1-phosphate","termid":"GO:0061622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0006091","GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycolytic process from galactose","termid":"GO:0061623"}


id: GO:0102541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 6-phosphate = beta-D-galactose 6-phosphate.","definition_xrefs":["GOC:pz","EC:5.1.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"D-galactose 6-phosphate 1-epimerase activity","secondary_identifiers":["MetaCyc:RXN-14816"],"termid":"GO:0102541"}


id: GO:0016604
data:
  {"annotated_genes":["SJAG_04768","SJAG_02622","SJAG_04949","SJAG_03214","SJAG_01867","SJAG_04863","SJAG_02382","SJAG_02242","SJAG_03939","SJAG_04936","SJAG_03923","SJAG_00701","SJAG_00456","SJAG_00961","SJAG_02720","SJAG_01900","SJAG_01169","SJAG_03995","SJAG_04006","SJAG_04601","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83663,86934,95995,100410,103899,105363,107567,107965,108861],"is_not":false,"summary":null,"term":"GO:0016604"},{"annotations":[83659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071920"},{"annotations":[88360,103554,83664,100411,87985,114181,89565,107402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990251"},{"annotations":[84401,99323,109182,107636,89007,101589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016607"}]},"cv_name":"cellular_component","definition":"Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.","definition_xrefs":["GOC:ma","PMID:10330182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00456":null,"SJAG_00701":null,"SJAG_00961":null,"SJAG_01169":null,"SJAG_01867":null,"SJAG_01900":null,"SJAG_02242":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_03214":null,"SJAG_03745":null,"SJAG_03923":null,"SJAG_03939":null,"SJAG_03995":null,"SJAG_04006":null,"SJAG_04601":null,"SJAG_04768":null,"SJAG_04863":null,"SJAG_04936":null,"SJAG_04949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005654"],"is_obsolete":false,"name":"nuclear body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao505137457"],"termid":"GO:0016604","terms_by_termid":{"GO:0016604":null,"GO:0016607":null,"GO:0071920":null,"GO:1990251":null}}


id: PR:Q09792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.08","synonyms":[{"name":"Spom972h-ppk8","type":"exact"}],"termid":"PR:Q09792"}


id: GO:0030117
data:
  {"annotated_genes":["SJAG_04931","SJAG_04644","SJAG_00379","SJAG_00800","SJAG_05345","SJAG_02349","SJAG_01167","SJAG_03153","SJAG_04474","SJAG_00104","SJAG_00192","SJAG_02234","SJAG_02805","SJAG_01508","SJAG_01809","SJAG_00284","SJAG_04002","SJAG_04517","SJAG_02539","SJAG_00906","SJAG_04070","SJAG_02453","SJAG_02177","SJAG_03907","SJAG_04565","SJAG_03726","SJAG_04391","SJAG_00108","SJAG_03558","SJAG_04609","SJAG_02482","SJAG_00072","SJAG_02282","SJAG_05344","SJAG_04569"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114946,97242,109108,108890],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[107757,92395,104440,107698],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[92260,107597,85068,90313],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030123"},{"annotations":[107600],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030131"},{"annotations":[109012,91019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030130"},{"annotations":[91020],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071439"},{"annotations":[110984,114566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030125"},{"annotations":[112481,100236,113489,89339,109862,94670,99387,94581,103227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030126"},{"annotations":[108083,108821,74166,104835,91643,70347,102671,112699,106315,89476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030127"}]},"cv_name":"cellular_component","definition":"Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"coated membrane","termid":"GO:0048475"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_00906":null,"SJAG_01167":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02805":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03726":null,"SJAG_03907":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_04931":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"membrane coat","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030117","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030123":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030131":null,"GO:0071439":null}}


id: PBO:0042233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 5 (pseudogene)","termid":"PBO:0042233"}


id: PBO:0038980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylserine hydrolase","termid":"PBO:0038980"}


id: PBO:0017442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_activity_of","termid":"PBO:0017442"}


id: PBO:0000534
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex binds MCB 5'-ACGCGT-3'","termid":"PBO:0000534"}


id: GO:0070978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cellular protein complex assembly that results in the formation of a voltage-gated calcium channel complex.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"voltage-gated calcium channel complex assembly","termid":"GO:0070978"}


id: PBO:0054053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1395","termid":"PBO:0054053"}


id: PBO:0029948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029948"}


id: PBO:0038794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 1A (pseudogene)","termid":"PBO:0038794"}


id: PBO:0077388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 128","termid":"PBO:0077388"}


id: PBO:0090975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxo-5-alpha-steroid 4-dehydrogenase","termid":"PBO:0090975"}


id: GO:0005948
data:
  {"annotated_genes":["SJAG_06635","SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99412,109364],"is_not":false,"summary":null,"term":"GO:0005948"}]},"cv_name":"cellular_component","definition":"A dimeric (a large and a small chain) or tetrameric (two large and two small chains) enzyme complex. Catalyzes the formation of acetolactate from pyruvate.","definition_xrefs":["PMID:16458324","GOC:jl","PMID:8756689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03985":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"acetolactate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acetohydroxyacid synthase complex","type":"exact"}],"termid":"GO:0005948","terms_by_termid":{"GO:0005948":null}}


id: PBO:0075803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 2, pseudogene","termid":"PBO:0075803"}


id: PBO:0068375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 168","termid":"PBO:0068375"}


id: FYPO:0006944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount on one or more ribosomal proteins measured in a cell is lower than normal.","definition_xrefs":["PMID:30862564","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased ribosomal protein level","synonyms":[{"name":"decreased cellular ribosomal protein level","type":"exact"},{"name":"decreased ribosomal protein level during mitotic cell cycle","type":"related"},{"name":"decreased ribosomal protein level during vegetative growth","type":"exact"},{"name":"reduced ribosomal protein level","type":"exact"}],"termid":"FYPO:0006944"}


id: PBO:0089324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (Nem1-Spo7 complex) catalytic subunit Nem1","termid":"PBO:0089324"}


id: PBO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rhp57delta double mutant showed a repair profile very similar to that to the rhp51deltasingle mutant","termid":"PBO:0001684"}


id: PBO:0088353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tyrosine-tRNA ligase Yrs1","termid":"PBO:0088353"}


id: PBO:0057692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1282","termid":"PBO:0057692"}


id: PBO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.16","termid":"PBO:0000610"}


id: PBO:0017782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid8 (predicted)","termid":"PBO:0017782"}


id: PBO:0084901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial tRNA:pseudouridine synthase; acts at positions 27 and 28, but not at position 72; efficiently and rapidly targeted to mitochondria, specifically dedicated to mitochondrial tRNA modification; mutation also affects pseudouridylation of some nuclear-encoded mRNAs; PUS2 has a paralog, PUS1, that arose from the whole genome duplication","termid":"PBO:0084901"}


id: GO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by lymphocytes expressing specific receptors for antigen produced through a somatic diversification process that includes somatic recombination of germline gene segments encoding immunoglobulin superfamily domains. Recombined receptors for antigen encoded by immunoglobulin superfamily domains include T cell receptors and immunoglobulins (antibodies) produced by B cells. The first encounter with antigen elicits a primary immune response that is slow and not of great magnitude. T and B cells selected by antigen become activated and undergo clonal expansion. A fraction of antigen-reactive T and B cells become memory cells, whereas others differentiate into effector cells. The memory cells generated during the primary response enable a much faster and stronger secondary immune response upon subsequent exposures to the same antigen (immunological memory). An example of this is the adaptive immune response found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","ISBN:0781735149","ISBN:1405196831","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}


id: PBO:0029312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_butyrate","termid":"PBO:0029312"}


id: GO:0060432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the lung, to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung pattern specification process","termid":"GO:0060432"}


id: GO:0043833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [methyl-Co(III) methylamine-specific corrinoid protein] + coenzyme M = [Co(I) methylamine-specific corrinoid protein] + H+ + methyl-coenzyme M. This reaction is the transfer of the methyl group from the methylated corrinoid cofactor of a methylamine corrinoid protein to coenzyme M.","definition_xrefs":["RHEA:18773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"[methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8099","MetaCyc:RXN-8101","EC:2.1.1.247","MetaCyc:RXN-8103"],"synonyms":[{"name":"MT2-A","type":"broad"},{"name":"methylamine-specific methylcobalamin:CoM methyltransferase activity","type":"exact"},{"name":"methylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"exact"},{"name":"methylcobamide:CoM methyltransferase activity","type":"broad"},{"name":"methylcobamide:coenzyme M methyltransferase activity","type":"broad"},{"name":"monomethylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"narrow"}],"termid":"GO:0043833"}


id: GO:0031891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoactive intestinal polypeptide receptor binding","termid":"GO:0031890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"type 1 vasoactive intestinal polypeptide receptor ligand","type":"narrow"},{"name":"type 2 PACAP receptor binding","type":"exact"}],"termid":"GO:0031891"}


id: PBO:0073611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siah E3 ubiquitin protein ligase 2","termid":"PBO:0073611"}


id: PBO:0045441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L4 pseudogene 1","termid":"PBO:0045441"}


id: GO:0035730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to S-nitrosoglutathione, a nitrosothiol considered to be a natural nitric oxide (NO) donor involved in S-nitrosylation, and in the storage and transport of nitric oxide in biological systems.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"S-nitrosoglutathione binding","synonyms":[{"name":"GSNO binding","type":"exact"}],"termid":"GO:0035730"}


id: RO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in catabolism of c if and only if p is a catabolic process, and the execution of p results in c being broken into smaller parts with energy being released.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_breakdown_of","termid":"RO:0002586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_catabolism_of","termid":"RO:0002589"}


id: PBO:0090473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II, and III complex subunit Trs23","termid":"PBO:0090473"}


id: PBO:0041985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC28A antisense RNA 1","termid":"PBO:0041985"}


id: PBO:0089754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin 13","termid":"PBO:0089754"}


id: GO:0005509
data:
  {"annotated_genes":["SJAG_04051","SJAG_01149","SJAG_00296","SJAG_00228","SJAG_03465","SJAG_03088","SJAG_04013","SJAG_03496","SJAG_04621","SJAG_00751","SJAG_00832","SJAG_01985","SJAG_00063","SJAG_01400","SJAG_04466","SJAG_03032","SJAG_04859","SJAG_02511","SJAG_04901","SJAG_01665","SJAG_01929","SJAG_02786","SJAG_00096","SJAG_00724","SJAG_00803","SJAG_02532","SJAG_03643","SJAG_04886","SJAG_02019","SJAG_03793","SJAG_01858","SJAG_03930","SJAG_04080","SJAG_01760","SJAG_04789","SJAG_02435","SJAG_01029","SJAG_00485","SJAG_04571","SJAG_04238","SJAG_00719","SJAG_00612","SJAG_03044","SJAG_02694","SJAG_03850","SJAG_00321","SJAG_04781","SJAG_02215","SJAG_01626","SJAG_00032","SJAG_01686"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57383,59781,65140,85770,85803,87354,88324,89505,89672,90182,90929,90969,91348,91503,91820,91845,92423,93006,93098,96819,97750,98632,98976,99750,100119,101248,101387,102223,102576,104169,104403,104507,104780,107136,107621,108280,108303,108424,109582,109879,110039,110109,111229,112723,113095,113615,113721,113868,114270,114411,114648,114933],"is_not":false,"summary":null,"term":"GO:0005509"}]},"cv_name":"molecular_function","definition":"Binding to a calcium ion (Ca2+).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00032":null,"SJAG_00063":null,"SJAG_00096":null,"SJAG_00228":null,"SJAG_00296":null,"SJAG_00321":null,"SJAG_00485":null,"SJAG_00612":null,"SJAG_00719":null,"SJAG_00724":null,"SJAG_00751":null,"SJAG_00803":null,"SJAG_00832":null,"SJAG_01029":null,"SJAG_01149":null,"SJAG_01400":null,"SJAG_01626":null,"SJAG_01665":null,"SJAG_01686":null,"SJAG_01760":null,"SJAG_01858":null,"SJAG_01929":null,"SJAG_01985":null,"SJAG_02019":null,"SJAG_02215":null,"SJAG_02435":null,"SJAG_02511":null,"SJAG_02532":null,"SJAG_02694":null,"SJAG_02786":null,"SJAG_03032":null,"SJAG_03044":null,"SJAG_03088":null,"SJAG_03465":null,"SJAG_03496":null,"SJAG_03643":null,"SJAG_03793":null,"SJAG_03850":null,"SJAG_03930":null,"SJAG_04013":null,"SJAG_04051":null,"SJAG_04080":null,"SJAG_04238":null,"SJAG_04466":null,"SJAG_04571":null,"SJAG_04621":null,"SJAG_04781":null,"SJAG_04789":null,"SJAG_04859":null,"SJAG_04886":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0046872"],"is_obsolete":false,"name":"calcium ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion storage activity","type":"related"}],"termid":"GO:0005509","terms_by_termid":{"GO:0005509":null}}


id: GO:0047462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + ATP + H2O = D-phenylalanine + AMP + diphosphate + 2 H+.","definition_xrefs":["RHEA:20201","EC:5.1.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylalanine racemase (ATP-hydrolyzing) activity","secondary_identifiers":["MetaCyc:5.1.1.11-RXN","KEGG_REACTION:R00686"],"synonyms":[{"name":"gramicidin S synthetase I","type":"related"},{"name":"phenylalanine racemase (ATP-hydrolysing)","type":"broad"},{"name":"phenylalanine racemase (adenosine triphosphate-hydrolysing)","type":"related"},{"name":"phenylalanine racemase activity","type":"related"}],"termid":"GO:0047462"}


id: PBO:0003021
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus splice sites","termid":"PBO:0003021"}


id: PBO:0053306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIN28A pseudogene 3","termid":"PBO:0053306"}


id: GO:2000582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATP-dependent microtubule motor activity, plus-end-directed.","definition_xrefs":["GOC:vw","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of microtubule motor activity, plus-end-directed (obsolete GO:2000582)","synonyms":[{"name":"positive regulation of ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"positive regulation of kinesin ATP phosphohydrolase (plus-end-directed)","type":"exact"},{"name":"positive regulation of kinesin activity","type":"related"},{"name":"positive regulation of plus-end-directed kinesin ATPase activity","type":"exact"},{"name":"positive regulation of plus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000582"}


id: GO:0120290
data:
  {"annotated_genes":["SJAG_00727","SJAG_05012","SJAG_01572","SJAG_02299","SJAG_05372","SJAG_01185","SJAG_01076","SJAG_02992","SJAG_03843","SJAG_01410","SJAG_02079","SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85329,85753,87664,92311,92820,95071,95189,105668,106075,110392,111613,112909],"is_not":false,"summary":null,"term":"GO:0120290"}]},"cv_name":"biological_process","definition":"A cellular localization process where a DNA replication fork that has stalled is signaled to relocate and anchor to the nuclear periphery for the time necessary to complete recombination-dependent replication.","definition_xrefs":["GOC:mah","PMID:33159083","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular localization","termid":"GO:0051641"},{"relation_name":"part_of","term_name":"replication fork processing","termid":"GO:0031297"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_01076":null,"SJAG_01185":null,"SJAG_01410":null,"SJAG_01572":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02299":null,"SJAG_02992":null,"SJAG_03843":null,"SJAG_05012":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0051179","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"stalled replication fork localization to nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stalled replication fork localization to nuclear periphery involved in replication fork processing","type":"exact"}],"termid":"GO:0120290","terms_by_termid":{"GO:0120290":null}}


id: PBO:0083689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enoyl reductase; catalyzes last step in each cycle of very long chain fatty acid elongation; localizes to ER, highly enriched in a structure marking nuclear-vacuolar junctions; coimmunoprecipitates with elongases Elo2p and Elo3p; protein increases in abundance and relative distribution to ER foci increases upon DNA replication stress; human homolog TECR implicated in nonsyndromic mental retardation, can complement yeast mutant","termid":"PBO:0083689"}


id: PBO:0018052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0018052"}


id: FYPO:0005292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is increased during a cellular response to hydroxyurea. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"increased chromatin binding during cellular response to hydroxyurea","synonyms":[{"name":"increased chromatin binding during cellular response to HU","type":"exact"}],"termid":"FYPO:0005292"}


id: PBO:0084134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity, broad selectivity, nucleoside/nucleobase transporter; vacuolar membrane localized transporter which may regulate the balance of nicotinamide riboside (NmR) levels between the cytosol and vacuole, contributing to salvage of NmR for use in cytosolic NAD+ synthesis; equilibrative nucleoside transporter (ENT) family member","termid":"PBO:0084134"}


id: PBO:0054913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2327","termid":"PBO:0054913"}


id: FYPO:0003974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more clusters of nuclear pores, associated with membrane fragments derived from the nuclear envelope, are present in the cytoplasm.","definition_xrefs":["PomBase:mah","PMID:7877997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear pore localization","termid":"FYPO:0003973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"nuclear pore aggregation in cytoplasm","synonyms":[{"name":"NPC aggregation in cytoplasm","type":"exact"},{"name":"aggregated nuclear pores present in cytoplasm","type":"exact"},{"name":"nuclear pore aggregation in cytoplasm during mitotic cell cycle","type":"related"},{"name":"nuclear pore aggregation in cytoplasm during vegetative growth","type":"exact"},{"name":"nuclear pore complex aggregation in cytoplasm","type":"exact"}],"termid":"FYPO:0003974"}


id: PBO:0056301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 pseudogene","termid":"PBO:0056301"}


id: PBO:0006313
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ortholog qualifier","termid":"PBO:0006313"}


id: PBO:0076526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 39","termid":"PBO:0076526"}


id: PBO:0067588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 749, pseudogene","termid":"PBO:0067588"}


id: GO:2000014
data:
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id: GO:0031554
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id: PBO:0088087
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id: GO:0075141
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id: GO:0090180
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id: GO:1905272
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id: GO:1901327
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id: PBO:0030119
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id: FYECO:0000333
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id: PBO:0015667
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id: GO:0140101
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tRNA","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:0140101","terms_by_termid":{"GO:0000048":null,"GO:0000213":null,"GO:0000215":null,"GO:0002161":null,"GO:0004045":null,"GO:0004479":null,"GO:0004526":null,"GO:0004812":null,"GO:0004813":null,"GO:0004814":null,"GO:0004815":null,"GO:0004816":null,"GO:0004817":null,"GO:0004818":null,"GO:0004819":null,"GO:0004820":null,"GO:0004821":null,"GO:0004822":null,"GO:0004823":null,"GO:0004824":null,"GO:0004825":null,"GO:0004826":null,"GO:0004827":null,"GO:0004828":null,"GO:0004829":null,"GO:0004830":null,"GO:0004831":null,"GO:0004832":null,"GO:0008175":null,"GO:0008176":null,"GO:0008193":null,"GO:0008479":null,"GO:0016427":null,"GO:0016428":null,"GO:0030697":null,"GO:0032267":null,"GO:0042781":null,"GO:0043399":null,"GO:0043907":null,"GO:0050567":null,"GO:0051500":null,"GO:0052381":null,"GO:0052735":null,"GO:0052905":null,"GO:0052906":null,"GO:0052927":null,"GO:0052929":null,"GO:0061503":null,"GO:0061708":null,"GO:0102262":null,"GO:0102263":null,"GO:0102264":null,"GO:0102265":null,"GO:0102266":null,"GO:0102267":null,"GO:0102521":null,"GO:0102522":null,"GO:0103016":null,"GO:0106029":null,"GO:0106050":null,"GO:0106335":null,"GO:0106339":null,"GO:0106340":null,"GO:0141101":null,"GO:0160102":null,"GO:0160103":null,"GO:0160104":null,"GO:0160107":null,"GO:0160148":null,"GO:0160150":null,"GO:1990984":null}}


id: GO:0005163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nerve growth factor receptor.","definition_xrefs":["GOC:ai","PMID:15654015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death receptor binding","termid":"GO:0005123"},{"relation_name":"is_a","term_name":"neurotrophin receptor binding","termid":"GO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"nerve growth factor receptor binding","synonyms":[{"name":"NGF receptor binding","type":"exact"},{"name":"nerve growth factor receptor ligand","type":"narrow"},{"name":"neurotrophin","type":"narrow"}],"termid":"GO:0005163"}


id: PBO:0045429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like C-mannosyltransferase 1","termid":"PBO:0045429"}


id: PBO:0063523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDYN antisense RNA 1","termid":"PBO:0063523"}


id: FYPO:0002227
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115606],"is_not":false,"summary":null,"term":"FYPO:0002227"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more triglycerides measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular triglyceride level during vegetative growth","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased cellular TAG level during vegetative growth","type":"exact"},{"name":"increased cellular triacylglycerol level during vegetative growth","type":"exact"},{"name":"increased cellular triglyceride level during mitotic cell cycle","type":"related"},{"name":"increased triglyceride accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002227","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO:0002227":null}}


id: PR:P0CY16
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mat3-Mc gene.","definition_xrefs":["UniProtKB:P0CY16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced mating-type M-specific polypeptide Mc (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.02","synonyms":[{"name":"Spom972h-mat3-Mc","type":"exact"},{"name":"mat-Mc (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CY16"}


id: GO:1905081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cerebellar neuron development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26609159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of cerebellar neuron development","termid":"GO:1905079"},{"relation_name":"positively_regulates","term_name":"cerebellar neuron development","termid":"GO:0098749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cerebellar neuron development","synonyms":[{"name":"activation of cerebellar neuron development","type":"narrow"},{"name":"up regulation of cerebellar neuron development","type":"exact"},{"name":"up-regulation of cerebellar neuron development","type":"exact"},{"name":"upregulation of cerebellar neuron development","type":"exact"}],"termid":"GO:1905081"}


id: GO:0061042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis involved in wound healing","termid":"GO:0060055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular wound healing","termid":"GO:0061042"}


id: PBO:0069352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 612, pseudogene","termid":"PBO:0069352"}


id: PBO:0052291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KHDC1 antisense RNA 1","termid":"PBO:0052291"}


id: GO:0034847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: naphthyl-2-hydroxymethyl-succinyl-CoA = naphthyl-2-oxomethyl-succinyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"naphthyl-2-hydroxymethyl-succinyl-CoA dehydrogenase activity","termid":"GO:0034847"}


id: GO:1904665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of N-terminal peptidyl-methionine acetylation.","definition_xrefs":["GOC:TermGenie","PMID:20807799","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein acetylation","termid":"GO:1901985"},{"relation_name":"is_a","term_name":"positive regulation of protein maturation","termid":"GO:1903319"},{"relation_name":"is_a","term_name":"regulation of N-terminal peptidyl-methionine acetylation","termid":"GO:1904663"},{"relation_name":"positively_regulates","term_name":"N-terminal peptidyl-methionine acetylation","termid":"GO:0017196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"positive regulation of N-terminal peptidyl-methionine acetylation","termid":"GO:1904665"}


id: GO:0045320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proton-transporting ATP synthase complex found in the chloroplast thylakoid membrane; it catalyzes the phosphorylation of ADP to ATP during photo-phosphorylation.","definition_xrefs":["ISBN:0716743663","GOC:mtg_sensu","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex","termid":"GO:0045259"},{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast proton-transporting ATP synthase complex","synonyms":[{"name":"chloroplast hydrogen-translocating F-type ATPase complex","type":"exact"},{"name":"chloroplast proton-transporting F-type ATPase complex","type":"exact"},{"name":"hydrogen-translocating F-type ATPase complex","type":"broad"}],"termid":"GO:0045320"}


id: GO:0034278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-alpha-copalyl diphosphate = stemar-13-ene + diphosphate.","definition_xrefs":["RHEA:25552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"stemar-13-ene synthase activity","secondary_identifiers":["MetaCyc:RXN-4882","EC:4.2.3.33","KEGG_REACTION:R09115"],"synonyms":[{"name":"9alpha-copalyl-diphosphate diphosphate-lyase (stemar-13-ene-forming) activity","type":"exact"}],"termid":"GO:0034278"}


id: GO:0016920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the release of the N-terminal pyroglutamyl group from a peptide or protein.","definition_xrefs":["GOC:mah","PMID:9920379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"pyroglutamyl-peptidase activity","termid":"GO:0016920"}


id: PBO:0111349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp10","termid":"PBO:0111349"}


id: GO:0038112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-8 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-8","termid":"GO:0098759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-8-mediated signaling pathway","synonyms":[{"name":"IL-8-mediated signaling pathway","type":"exact"},{"name":"interleukin-8-mediated signalling pathway","type":"exact"}],"termid":"GO:0038112"}


id: PBO:0004743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, DUF1674 family","termid":"PBO:0004743"}


id: GO:1905781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine exposure on apoptotic cell surface.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:kmv","PMID:17401362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipid translocation","termid":"GO:0061093"},{"relation_name":"is_a","term_name":"negative regulation of execution phase of apoptosis","termid":"GO:1900118"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine exposure on apoptotic cell surface","termid":"GO:1905780"},{"relation_name":"negatively_regulates","term_name":"phosphatidylserine exposure on apoptotic cell surface","termid":"GO:0070782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"down regulation of externalization of phosphatidylserine","type":"exact"},{"name":"down regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"down-regulation of externalization of phosphatidylserine","type":"exact"},{"name":"down-regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"downregulation of externalization of phosphatidylserine","type":"exact"},{"name":"downregulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"inhibition of externalization of phosphatidylserine","type":"narrow"},{"name":"inhibition of phosphatidylserine exposure on apoptotic cell surface","type":"narrow"},{"name":"negative regulation of externalization of phosphatidylserine","type":"exact"}],"termid":"GO:1905781"}


id: PBO:0067205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 270, pseudogene","termid":"PBO:0067205"}


id: PBO:0064907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 catalytic subunit","termid":"PBO:0064907"}


id: GO:0001314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replication of circular DNA following excision from the chromosome of dividing cells as they age; replication of extrachromosomal circular DNA generally occurs independently of chromosomal replication.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete replication of extrachromosomal circular DNA involved in replicative cell aging (obsolete GO:0001314)","synonyms":[{"name":"replication of extrachromosomal circular DNA during replicative cell ageing","type":"exact"},{"name":"replication of extrachromosomal circular DNA during replicative cell aging","type":"related"}],"termid":"GO:0001314"}


id: PR:P40377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11630:SF44","PRO:DNx","OMA:SCHPO02759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.04c","secondary_identifiers":["UniProtKB:P40377"],"synonyms":[{"name":"Spom972h-MCM2","type":"exact"},{"name":"cell division control protein 19 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"minichromosome maintenance protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40377"}


id: GO:0009044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-xylans so as to remove successive D-xylose residues from the non-reducing termini.","definition_xrefs":["EC:3.2.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"xylan 1,4-beta-xylosidase activity","secondary_identifiers":["MetaCyc:3.2.1.37-RXN"],"synonyms":[{"name":"1,4-beta-D-xylan xylohydrolase activity","type":"related"},{"name":"beta-D-xylopyranosidase activity","type":"related"},{"name":"beta-xylosidase activity","type":"related"},{"name":"exo-1,4-beta-D-xylosidase activity","type":"related"},{"name":"exo-1,4-beta-xylosidase activity","type":"related"},{"name":"exo-1,4-xylosidase activity","type":"related"},{"name":"xylobiase activity","type":"related"}],"termid":"GO:0009044"}


id: PBO:0082718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1 complex; which associates with RNA polymerase II and is involved in histone methylation; plays a role in regulating Ty1 transposition; involved in transcription elongation as demonstrated by the G-less-based run-on (GLRO) assay","termid":"PBO:0082718"}


id: PR:000027708
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinesin-like motor protein klp9/SPBC15D4.01c phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by cdc2p during mitosis. Example: UniProtKB:Q1MTQ7-1, Ser-605, MOD:00046, and/or (Ser-611, MOD:00046, or Ser-613, MOD:00046).","definition_xrefs":["PMID:19686686","PomBase:MAH","PMID:18257517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin-like motor protein klp9/SPBC15D4.01c","termid":"PR:000027702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like motor protein klp9/SPBC15D4.01c phosphorylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC15D4.01c","synonyms":[{"name":"Spom-klp9/Phos:1","type":"exact"}],"termid":"PR:000027708"}


id: GO:0060944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neural crest cells to a cardiac fibroblast fate and their capacity to differentiate into cardiac fibroblast cells. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell fate commitment","termid":"GO:0060937"},{"relation_name":"part_of","term_name":"neural crest-derived cardiac fibroblast cell differentiation","termid":"GO:0060942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac fibroblast cell fate commitment","termid":"GO:0060944"}


id: PBO:0070494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 29","termid":"PBO:0070494"}


id: GO:1903115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament-based movement.","definition_xrefs":["GOC:TermGenie","PMID:24798735","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based process","termid":"GO:0032970"},{"relation_name":"regulates","term_name":"actin filament-based movement","termid":"GO:0030048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament-based movement","termid":"GO:1903115"}


id: PATO:0000182
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000182 abdominal tone (obsolete PATO:0000182)","termid":"PATO:0000182"}


id: GO:2000475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of opioid receptor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of opioid receptor signaling pathway","termid":"GO:2000474"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of opioid receptor signaling pathway","synonyms":[{"name":"negative regulation of opioid receptor signalling pathway","type":"exact"}],"termid":"GO:2000475"}


id: GO:0043286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of poly(3-hydroxyalkanoates), polyesters of 3-hydroxyacids produced as intracellular granules by a large variety of bacteria.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"poly(3-hydroxyalkanoate) biosynthetic process","termid":"GO:0042621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of poly(3-hydroxyalkanoate) biosynthetic process","synonyms":[{"name":"regulation of PHA","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) anabolism","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) biosynthesis","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) formation","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) synthesis","type":"exact"}],"termid":"GO:0043286"}


id: GO:0060537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of muscle tissue over time, from its initial formation to its mature state. Muscle tissue is a contractile tissue made up of actin and myosin fibers.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle tissue development","termid":"GO:0060537"}


id: GO:0018398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-phenylalanine to form L-3'-bromophenylalanine.","definition_xrefs":["RESID:AA0175"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine bromination to L-3'-bromophenylalanine (obsolete GO:0018398)","termid":"GO:0018398"}


id: GO:0034987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one or more specific sites on an immunoglobulin receptor molecule.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"immunoglobulin receptor binding","synonyms":[{"name":"Fc receptor binding","type":"related"}],"termid":"GO:0034987"}


id: SO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one DJ-gene, and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DJ_J_cluster","synonyms":[{"name":"(DJ)-J-CLUSTER","type":"exact"},{"name":"DJ J cluster","type":"exact"}],"termid":"SO:0000485"}


id: SO:0001771
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that has been found to be associated with disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_phenotype","termid":"SO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease_associated_variant","synonyms":[{"name":"disease associated variant","type":"exact"}],"termid":"SO:0001771"}


id: GO:0005854
data:
  {"annotated_genes":["SJAG_01733","SJAG_01641"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94045,103406],"is_not":false,"summary":null,"term":"GO:0005854"}]},"cv_name":"cellular_component","definition":"A heterodimeric protein complex that can reversibly bind to ribosomes, and is located in direct proximity to newly synthesized polypeptide chains as they emerge from the ribosome.","definition_xrefs":["PMID:7568149","PMID:12475173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01641":null,"SJAG_01733":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nascent polypeptide-associated complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAC","type":"exact"},{"name":"NACA","type":"exact"}],"termid":"GO:0005854","terms_by_termid":{"GO:0005854":null}}


id: GO:0061365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the activity of triglyceride lipase.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipase activity","termid":"GO:0060193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of triglyceride lipase activity","synonyms":[{"name":"positive regulation of TAG activity","type":"exact"}],"termid":"GO:0061365"}


id: PBO:0028300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0028300"}


id: PBO:0084851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; localizes to vacuole in response to H2O2","termid":"PBO:0084851"}


id: GO:2000840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dehydroepiandrosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"dehydroepiandrosterone secretion","termid":"GO:0035942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of dehydroepiandrosterone secretion","synonyms":[{"name":"regulation of 3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"regulation of DHEA secretion","type":"exact"},{"name":"regulation of dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:2000840"}


id: PBO:0085750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; implicated in Slt2p mitogen-activated (MAP) kinase signaling pathway; interacts with numerous components in the mating pheromone and CWI MAPK pathways; associates with Rlm1p; KDX1 has a paralog, SLT2, that arose from the whole genome duplication","termid":"PBO:0085750"}


id: PBO:0027745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_nitrogen_starvation","termid":"PBO:0027745"}


id: GO:1905231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a borneol stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:26593909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to borneol","termid":"GO:1905230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to borneol","termid":"GO:1905231"}


id: PBO:0078638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 12","termid":"PBO:0078638"}


id: PBO:0089962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome-associated chaperone, zuotin","termid":"PBO:0089962"}


id: PATO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000129 absolute weight (obsolete PATO:0000129)","termid":"PATO:0000129"}


id: PBO:0049530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 1","termid":"PBO:0049530"}


id: PBO:0003399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex zeta subunit Cct6","termid":"PBO:0003399"}


id: PBO:0025533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-C ortholog Cnp3","termid":"PBO:0025533"}


id: GO:0047055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-reticuline + [reduced NADPH--hemoprotein reductase] + O2 -> salutaridine + [oxidized NADPH--hemoprotein reductase] + 2 H2O.","definition_xrefs":["RHEA:17713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"salutaridine synthase activity","secondary_identifiers":["KEGG_REACTION:R04696","EC:1.14.19.67","MetaCyc:1.1.3.35-RXN"],"synonyms":[{"name":"(R)-reticuline oxidase (C-C phenol-coupling) activity","type":"related"}],"termid":"GO:0047055"}


id: GO:0052112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism reduces the flow of fluid within the host xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:28871268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host anatomical structure","termid":"GO:0052111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated occlusion of host xylem","synonyms":[{"name":"occlusion by symbiont of host xylem","type":"exact"}],"termid":"GO:0052112"}


id: PBO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 33B","termid":"PBO:0052793"}


id: GO:0070166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts, mainly carbonated hydroxyapatite, are deposited in tooth enamel.","definition_xrefs":["PMID:21196346","GOC:BHF","PMID:16931858","GOC:sl","PMID:10206335","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth mineralization","termid":"GO:0034505"},{"relation_name":"part_of","term_name":"amelogenesis","termid":"GO:0097186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enamel mineralization","synonyms":[{"name":"enamel formation","type":"related"}],"termid":"GO:0070166"}


id: GO:0016575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of acetyl groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone deacetylation (obsolete GO:0016575)","termid":"GO:0016575"}


id: PBO:0091583
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RAD1","termid":"PBO:0091583"}


id: GO:0006529
data:
  {"annotated_genes":["SJAG_04549","SJAG_02832","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98280,106904],"is_not":false,"summary":null,"term":"GO:0006529"},{"annotations":[107922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[98281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"asparagine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"asparagine anabolism","type":"exact"},{"name":"asparagine biosynthesis","type":"exact"},{"name":"asparagine formation","type":"exact"},{"name":"asparagine synthesis","type":"exact"}],"termid":"GO:0006529","terms_by_termid":{"GO:0006529":null,"GO:0019266":null,"GO:0070981":null}}


id: GO:0018475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-2-methyl-5-isopropylhexa-2,5-dienal + NAD+ + H2O = NADH + H+ + trans-2-methyl-5-isopropylhexa-2,5-dienoic acid.","definition_xrefs":["UM-BBD_reactionID:r0745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"trans-2-methyl-5-isopropylhexa-2,5-dienal dehydrogenase activity","termid":"GO:0018475"}


id: PBO:0042591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 4","termid":"PBO:0042591"}


id: GO:0071868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monoamine stimulus. A monoamine is any of a group of molecular messengers that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to monoamine","termid":"GO:0071867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to monoamine stimulus","termid":"GO:0071868"}


id: MOD:00933
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - 5-hydro-5-methylimidazol-4-one, arginine methylglyoxal arginine adduct (+54 amu)","definition_xrefs":["Unimod:319#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C3-H2-O adduct (+54 amu) of malondialdehyde with lysine or methylglyoxal with arginine.","termid":"MOD:00630"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylglyoxal arginine adduct (+54 amu)","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:00933"}


id: PBO:0040220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha tubulin acetyltransferase 1","termid":"PBO:0040220"}


id: PBO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin pseudogene 2","termid":"PBO:0044228"}


id: GO:0180036
data:
  {"annotated_genes":["SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114185],"is_not":false,"summary":null,"term":"GO:0180036"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant lncRNAs within the nucleus.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear lncRNA surveillance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180036","terms_by_termid":{"GO:0180036":null}}


id: GO:1901121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tobramycin.","definition_xrefs":["UniPathway:UPA00971","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"tobramycin metabolic process","termid":"GO:1901119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tobramycin biosynthetic process","synonyms":[{"name":"tobramycin anabolism","type":"exact"},{"name":"tobramycin biosynthesis","type":"exact"},{"name":"tobramycin formation","type":"exact"},{"name":"tobramycin synthesis","type":"exact"}],"termid":"GO:1901121"}


id: PBO:0052412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1","termid":"PBO:0052412"}


id: PBO:0068194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 501","termid":"PBO:0068194"}


id: PBO:0048355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 66","termid":"PBO:0048355"}


id: PBO:0003968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein","termid":"PBO:0003968"}


id: MOD:00266
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a peptide bond between a C-terminal L-glutamic acid residue and one or more free L-glutamic acid molecules to form N-(L-glutamyl)-poly-L-glutamic acid.","definition_xrefs":["PubMed:328274","RESID:AA0261","PubMed:2570347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-L-glutamyl-poly-L-glutamic acid","termid":"MOD:00266"}


id: PBO:0073096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D","termid":"PBO:0073096"}


id: PR:Q10184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3F10.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.09","synonyms":[{"name":"5-proFAR isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC3F10.09","type":"exact"},{"name":"phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10184"}


id: RO:HOM0000066
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Biological homology that involves parts of the same organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_biological_homology_relationship_with","termid":"RO:HOM0000008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_iterative_homology_relationship_with","synonyms":[{"name":"iterative homologous to","type":"exact"}],"termid":"RO:HOM0000066"}


id: PBO:0060790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S1","termid":"PBO:0060790"}


id: PBO:0011968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy C terminal domain family protein Atg10 (predicted)","termid":"PBO:0011968"}


id: PBO:0083710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in a late step of GPI anchor assembly; involved in the addition of phosphoethanolamine to the multiply mannosylated glycosylphosphatidylinositol (GPI) intermediate; human PIG-Fp is a functional homolog","termid":"PBO:0083710"}


id: GO:0070111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bacteroid-containing symbiosome in which the bacterial component is a genetically highly reduced cyanobacterium that is photosynthetically active and incapable of an independent existence outside its host. The chromatophore functions as a photosynthetic organelle, and has been found and characterized in the amoeba Paulinella chromatophora.","definition_xrefs":["PMID:18356055","GOC:expert_mm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteroid-containing symbiosome","termid":"GO:0043660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"organellar chromatophore","synonyms":[{"name":"Paulinella-type chromatophore","type":"exact"}],"termid":"GO:0070111"}


id: GO:0022842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a narrow pore channel that may be gated or ungated.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"narrow pore channel activity","termid":"GO:0022842"}


id: GO:1900334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from 3-(methylthio)propionic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:1900333"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:2001132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006091","GO:0006629","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from 3-(methylthio)propionic acid","synonyms":[{"name":"down regulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"down-regulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"downregulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"inhibition of methane biosynthetic process from 3-(methylthio)propionic acid","type":"narrow"}],"termid":"GO:1900334"}


id: GO:0034620
data:
  {"annotated_genes":["SJAG_02601","SJAG_03815","SJAG_01768","SJAG_00226","SJAG_04471","SJAG_03841","SJAG_04103","SJAG_00564","SJAG_04262","SJAG_04435","SJAG_04118","SJAG_00530","SJAG_04567","SJAG_03611","SJAG_04283","SJAG_00790","SJAG_01516","SJAG_00681","SJAG_00403","SJAG_03482"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99043,106117,106118],"is_not":false,"summary":null,"term":"GO:0034620"},{"annotations":[85821,97352,109923,113318,110316,112882,103282,94836,89065,105678,112134,113472,90625,110184],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030968"},{"annotations":[89212,85671],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036498"},{"annotations":[84505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034514"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to unfolded protein","termid":"GO:0006986"},{"relation_name":"is_a","term_name":"cellular response to topologically incorrect protein","termid":"GO:0035967"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00564":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_01516":null,"SJAG_01768":null,"SJAG_02601":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03815":null,"SJAG_03841":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04471":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to unfolded protein","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heat shock protein activity","type":"related"}],"termid":"GO:0034620","terms_by_termid":{"GO:0030968":null,"GO:0034514":null,"GO:0034620":null,"GO:0036498":null}}


id: PR:Q09740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamine--fructose-6-phosphate aminotransferase [isomerizing] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine--fructose-6-phosphate aminotransferase [isomerizing] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.11","secondary_identifiers":["UniProtKB:Q09740"],"synonyms":[{"name":"D-fructose-6-phosphate amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GFAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-glmS","type":"exact"},{"name":"hexosephosphate aminotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09740"}


id: PBO:0071258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 3","termid":"PBO:0071258"}


id: PBO:0077027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte selection associated family member 2","termid":"PBO:0077027"}


id: GO:1990555
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84586],"is_not":false,"summary":null,"term":"GO:1990555"}]},"cv_name":"biological_process","definition":"The process in which oxaloacetate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate(2-) transmembrane transport","termid":"GO:1902356"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"mitochondrial oxaloacetate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990555","terms_by_termid":{"GO:1990555":null}}


id: PBO:0073452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 1","termid":"PBO:0073452"}


id: PR:O74896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mhf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHF histone-fold complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.12c","synonyms":[{"name":"MHF histone-fold complex subunit 1 (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"SPCC576.12c","type":"related"},{"name":"Spom972h-mhf2","type":"exact"}],"termid":"PR:O74896"}


id: PBO:0025552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase","termid":"PBO:0025552"}


id: GO:0046269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene-4-sulfonate, 4-methylbenzenesulfonate, the anion of sulfonic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid catabolic process","termid":"GO:0016054"},{"relation_name":"is_a","term_name":"toluene-4-sulfonate metabolic process","termid":"GO:0018972"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"toluene-4-sulfonate catabolic process","synonyms":[{"name":"4-toluenesulfonate catabolic process","type":"exact"},{"name":"4-toluenesulfonate catabolism","type":"exact"},{"name":"toluene-4-sulfonate breakdown","type":"exact"},{"name":"toluene-4-sulfonate catabolism","type":"exact"},{"name":"toluene-4-sulfonate degradation","type":"exact"},{"name":"toluene-4-sulphonate catabolic process","type":"exact"},{"name":"toluene-4-sulphonate catabolism","type":"exact"}],"termid":"GO:0046269"}


id: PBO:0054047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1388","termid":"PBO:0054047"}


id: PBO:0028971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_Golgi_cisternae_present","termid":"PBO:0028971"}


id: PBO:0053475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 445","termid":"PBO:0053475"}


id: GO:1901155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of paromomycin.","definition_xrefs":["UniPathway:UPA00970","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"paromomycin metabolic process","termid":"GO:1901153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"paromomycin biosynthetic process","synonyms":[{"name":"paromomycin anabolism","type":"exact"},{"name":"paromomycin biosynthesis","type":"exact"},{"name":"paromomycin formation","type":"exact"},{"name":"paromomycin synthesis","type":"exact"}],"termid":"GO:1901155"}


id: PBO:0027586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_sister_chromatid_cohesion_at_centromere","termid":"PBO:0027586"}


id: PBO:0073340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 2","termid":"PBO:0073340"}


id: FYPO:0002113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable curved vegetative cell","synonyms":[{"name":"curved inviable cell","type":"exact"},{"name":"inviable curved cell","type":"exact"},{"name":"inviable curved cell during vegetative growth","type":"exact"},{"name":"inviable curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved vegetative cell","type":"exact"}],"termid":"FYPO:0002113"}


id: PBO:0068244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 1","termid":"PBO:0068244"}


id: PBO:0046357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 15","termid":"PBO:0046357"}


id: PBO:0005358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Mad3","termid":"PBO:0005358"}


id: PBO:0067743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 42","termid":"PBO:0067743"}


id: GO:0018125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-cysteine to form peptidyl-S-methyl-L-cysteine.","definition_xrefs":["RESID:AA0234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine methylation","termid":"GO:0018125"}


id: GO:0120151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitotic actomyosin contractile ring disassembly.","definition_xrefs":["PMID:19109423"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitotic actomyosin contractile ring disassembly (obsolete GO:0120151)","termid":"GO:0120151"}


id: PATO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being tapering gradually into a rigid point.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tapered","termid":"PATO:0001500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cuspidate","termid":"PATO:0001973"}


id: FYPO:0005586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylethanolamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular phosphatidylethanolamine level","synonyms":[{"name":"increased cellular PE level","type":"exact"},{"name":"increased cellular phosphatidylethanolamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylethanolamine level during vegetative growth","type":"exact"},{"name":"increased phosphatidylethanolamine accumulation","type":"related"}],"termid":"FYPO:0005586"}


id: PBO:0039919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho/Rac guanine nucleotide exchange factor 18","termid":"PBO:0039919"}


id: GO:0019573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-arabinose to form xylulose 5-phosphate. D-arabinose is converted into D-ribulose, which is phosphorylated to ribulose-5-phosphate, which is isomerized to give D-xylulose-5-phosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-arabinose catabolic process","termid":"GO:0019571"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate biosynthetic process","termid":"GO:1901159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"D-arabinose catabolic process to xylulose 5-phosphate","secondary_identifiers":["MetaCyc:DARABCAT-PWY"],"synonyms":[{"name":"D-arabinose breakdown to xylulose 5-phosphate","type":"exact"},{"name":"D-arabinose degradation to xylulose 5-phosphate","type":"exact"}],"termid":"GO:0019573"}


id: PBO:0004551
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally activates stress related genes","termid":"PBO:0004551"}


id: GO:0039664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The viral-induced lysis of an organelle (endosome, lysosome, or caveosome) that is involved in the uptake of a virus into a host cell. Occurs once the virus is within the organelle, and results in transfer of the viral contents from the organelle compartment into the cytoplasm.","definition_xrefs":["GOC:bf","GOC:jl","VZ:984","UniProtKB-KW:KW-1174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysis of host organelle involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via endosome membrane lysis","type":"narrow"},{"name":"viral entry into host cell via lysis of host organelle membrane","type":"related"},{"name":"viral membrane-lytic protein","type":"related"},{"name":"viral penetration via lysis of host organellar membrane","type":"exact"}],"termid":"GO:0039664"}


id: PBO:0058377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4749","termid":"PBO:0058377"}


id: PBO:0084559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-associated mitoribosome receptor; involved along with Dpi29p in the cotranslational insertion of nascent polypeptide chains into the inner mitochondrial membrane; associates with nascent polypeptide chains; interacts with Mdm38p and may recruit mRNA-specific translational activators to the mitoribosome; null mutant displays decreased tolerance to mistranslation-induced proteotoxic stress; localizes to the inner mitochondrial membrane","termid":"PBO:0084559"}


id: MOD:00362
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-arginine residue and a two-iron two-sulfur cluster to tris-L-cysteinyl L-arginyl diiron disulfide.","definition_xrefs":["PubMed:14704425","RESID:AA0357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-arginine residue","termid":"MOD:02076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl L-arginyl diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"di-mu-sulfido(N(eta1)-arginyl-S-cysteinyliron)(bis-S-cysteinyliron)","type":"exact"},{"name":"tris-L-cysteinyl L-arginyl diiron disulfide","type":"exact"}],"termid":"MOD:00362"}


id: FYPO:0002047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells show decreased sensitivity to heat shock, when the cell is also subject to nitrogen starvation. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to heat shock","termid":"FYPO:0002045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to heat shock during nitrogen starvation","synonyms":[{"name":"increased cell population growth during cellular response to heat shock during nitrogen starvation","type":"exact"},{"name":"increased growth during cellular response to heat shock during nitrogen starvation","type":"exact"},{"name":"resistance to heat shock during nitrogen depletion","type":"exact"},{"name":"resistance to heat shock during nitrogen deprivation","type":"exact"},{"name":"resistant to heat shock during nitrogen starvation","type":"exact"}],"termid":"FYPO:0002047"}


id: GO:0034778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA = 4-isopropenyl-2-ketocyclohexane-1-carboxyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA dehydrogenase activity","termid":"GO:0034778"}


id: PBO:0062416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 47 pseudogene","termid":"PBO:0062416"}


id: GO:0062157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that is capable of the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.","definition_xrefs":["PMID:31435016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel complex","termid":"GO:0034705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial ATP-gated potassium channel complex","termid":"GO:0062157"}


id: SO:0000711
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene with mRNA recoded by translational bypass.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"recoded_by_translational_bypass","termid":"SO:0000886"},{"relation_name":"is_a","term_name":"gene_with_recoded_mRNA","termid":"SO:0000693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_mRNA_recoded_by_translational_bypass","synonyms":[{"name":"gene with mRNA recoded by translational bypass","type":"exact"}],"termid":"SO:0000711"}


id: MOD:01537
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01537"}


id: PBO:0045187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B6","termid":"PBO:0045187"}


id: PBO:0046014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 1","termid":"PBO:0046014"}


id: GO:0038075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein + ATP = protein phosphate + ADP by a mitogen-activated protein kinase, as part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase activity involved in innate immune response (obsolete GO:0038075)","synonyms":[{"name":"MAPK activity involved in innate immune response","type":"exact"}],"termid":"GO:0038075"}


id: GO:0061306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The identification and annealing of complementary base pairs in single-strand DNA that contributes to double-strand break repair.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA strand renaturation involved in double-strand break repair (obsolete GO:0061306)","termid":"GO:0061306"}


id: PBO:0060353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO18B antisense RNA 1","termid":"PBO:0060353"}


id: PBO:0076902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 56, pseudogene","termid":"PBO:0076902"}


id: PBO:0040457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+/K+ transporting non-gastric alpha2 subunit","termid":"PBO:0040457"}


id: PBO:0088876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenate-cysteine ligase Cab2","termid":"PBO:0088876"}


id: FYPO:0006418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cleavage and rejoining of intermediates formed during meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"},{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal resolution of meiotic recombination intermediates","termid":"FYPO:0006418"}


id: PBO:0066203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 4","termid":"PBO:0066203"}


id: PBO:0053435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 380","termid":"PBO:0053435"}


id: SO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nc_conserved_region","synonyms":[{"name":"conserved non-coding element","type":"exact"},{"name":"conserved non-coding sequence","type":"exact"},{"name":"nc conserved region","type":"exact"},{"name":"noncoding conserved region","type":"exact"}],"termid":"SO:0000334"}


id: PBO:0063383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 2 like","termid":"PBO:0063383"}


id: MOD:00569
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues that are isobaric at a resolution below 0.000001 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"}


id: PBO:0041250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 162","termid":"PBO:0041250"}


id: MOD:00758
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to O4-(N-acetylamino)glucosyl-L-hydroxyproline.","definition_xrefs":["PubMed:15238247","PubMed:9660787","RESID:AA0390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"O4-(N-acetylamino)hexosyl-L-hydroxyproline","termid":"MOD:01677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O4-(N-acetylamino)glucosyl-L-hydroxyproline","synonyms":[{"name":"O4-glycosyl-hydroxyproline","type":"exact"},{"name":"(2S,4R)-4-[2-acetamido-2-deoxy-alpha-D-glucopyranosyloxy]pyrrolidine-2-carboxylic acid","type":"exact"},{"name":"4-(N-acetylglucosaminyloxy)proline","type":"exact"},{"name":"4-[(2-N-acetylamino)-alpha-D-glucopyranosyl]oxyproline","type":"exact"},{"name":"CARBOHYD O-linked (GlcNAc) hydroxyproline","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O4-(N-acetylamino)glucosyl-L-hydroxyproline","type":"exact"},{"name":"O4GlcNAcHyPro","type":"exact"},{"name":"alpha-2-(N-acetylamino)glucopyranosyl-4-hydroxyproline","type":"exact"}],"termid":"MOD:00758"}


id: PBO:0060070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 17","termid":"PBO:0060070"}


id: GO:0098630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering together of unicellular organisms in suspension form aggregates.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell aggregation","termid":"GO:0098743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aggregation of unicellular organisms","synonyms":[{"name":"aggregation of single cell organisms","type":"exact"}],"termid":"GO:0098630"}


id: PBO:0011958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_amino_acid_deletion","termid":"PBO:0011958"}


id: GO:0046286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavonoid phytoalexins, a group of water-soluble phenolic derivatives containing a flavan skeleton, which possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid catabolic process","termid":"GO:0046275"},{"relation_name":"is_a","term_name":"flavonoid phytoalexin metabolic process","termid":"GO:0046285"},{"relation_name":"is_a","term_name":"phytoalexin catabolic process","termid":"GO:0052316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0019748","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"flavonoid phytoalexin catabolic process","synonyms":[{"name":"flavonoid phytoalexin breakdown","type":"exact"},{"name":"flavonoid phytoalexin catabolism","type":"exact"},{"name":"flavonoid phytoalexin degradation","type":"exact"}],"termid":"GO:0046286"}


id: PBO:0040842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLK proto-oncogene, Src family tyrosine kinase","termid":"PBO:0040842"}


id: GO:0000506
data:
  {"annotated_genes":["SJAG_04881","SJAG_02913","SJAG_06383","SJAG_03066","SJAG_02804","SJAG_04119"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89110,89201,104693,106037,107706,113326],"is_not":false,"summary":null,"term":"GO:0000506"}]},"cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the transfer of GlcNAc from UDP-GlcNAc to an acceptor phosphatidylinositol, the first step in the production of GPI anchors for cell surface proteins. The complex contains PIG-A, PIG-C, PIG-H, PIG-Q, PIG-P, and DPM2 in human, and Eri1p, Gpi1p, Gpi2p, Gpi15p, Gpi19p, and Spt14p in budding yeast.","definition_xrefs":["PMID:10944123","GOC:kp","GOC:rb","PMID:15163411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_04119":null,"SJAG_04881":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005783","GO:0005737","GO:0005789"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-GlcNAc transferase complex","type":"exact"},{"name":"GPI-GnT complex","type":"exact"},{"name":"GPI-N-acetylglucosaminyltransferase complex","type":"exact"}],"termid":"GO:0000506","terms_by_termid":{"GO:0000506":null}}


id: PBO:0088854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein in duplicated region/dubious, shorter version of SJAG_00023","termid":"PBO:0088854"}


id: GO:0002188
data:
  {"annotated_genes":["SJAG_01487","SJAG_02628"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100175,101420],"is_not":false,"summary":null,"term":"GO:0002188"}]},"cv_name":"biological_process","definition":"A gene-specific translational control mechanism where the small ribosomal subunit remains attached to the mRNA following termination of translation, then resumes scanning on the same mRNA molecule and initiates again at a downstream start site. Reinitiation depends on de novo recruitment of the ternary complex that is required to recognize the next AUG codon.","definition_xrefs":["PMID:18056426","PMID:18765792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01487":null,"SJAG_02628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0002181"],"is_obsolete":false,"name":"translation reinitiation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002188","terms_by_termid":{"GO:0002188":null}}


id: PBO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"appears to be truncated","termid":"PBO:0000060"}


id: GO:0102080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + glycine = H+ + phenylacetylglycine + coenzyme A.","definition_xrefs":["EC:2.3.1.192","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phenylacetyl-coenzyme A:glycine N-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-10821","RHEA:27850"],"termid":"GO:0102080"}


id: PBO:0083300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 5' end of essential DED1 gene required for translation initiation","termid":"PBO:0083300"}


id: GO:0160131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled self-propelled movement of a sperm cell from the uterus through the uterotubal junction (UTJ) into the oviduct, where interaction between the sperm and the UTJ acts as a major selective barrier for sperm, allowing only living, motile, uncapacitated, morphologically normal sperm with intact acrosomes to pass from the uterus into the oviduct.","definition_xrefs":["PMID:29353867","PMID:32712384","PMID:34057175","GOC:krc","PMID:31131960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm migration through the uterotubal junction","synonyms":[{"name":"sperm migration from the uterus to the oviduct","type":"exact"},{"name":"sperm migration through the UTJ","type":"related"}],"termid":"GO:0160131"}


id: GO:0047572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + H2O = D-glycerate + phosphate.","definition_xrefs":["EC:3.1.3.38","RHEA:12412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"3-phosphoglycerate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R01511","MetaCyc:3-PHOSPHOGLYCERATE-PHOSPHATASE-RXN"],"synonyms":[{"name":"3-PGA phosphatase activity","type":"related"},{"name":"D-3-phosphoglycerate phosphatase activity","type":"related"},{"name":"D-glycerate-3-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0047572"}


id: PBO:0064648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase with EF-hand domain 2","termid":"PBO:0064648"}


id: GO:0050428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate biosynthetic process","termid":"GO:0034036"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"3'-phosphoadenosine 5'-phosphosulfate metabolic process","termid":"GO:0050427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0055086"],"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate biosynthetic process","synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulfate anabolism","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulfate biosynthesis","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulfate formation","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulfate synthesis","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulphate biosynthesis","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulphate biosynthetic process","type":"exact"},{"name":"3'-phosphoadenylyl-sulfate biosynthesis","type":"exact"},{"name":"3'-phosphoadenylyl-sulfate biosynthetic process","type":"exact"},{"name":"PAPS biosynthesis","type":"exact"},{"name":"PAPS biosynthetic process","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate biosynthesis","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate biosynthetic process","type":"exact"},{"name":"phosphoadenosine phosphosulfate biosynthesis","type":"exact"},{"name":"phosphoadenosine phosphosulfate biosynthetic process","type":"exact"}],"termid":"GO:0050428"}


id: GO:1905359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","PMID:26696398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to meiotic spindle","synonyms":[{"name":"protein localisation to meiotic spindle","type":"exact"}],"termid":"GO:1905359"}


id: GO:0033879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 17-O-acetylajmaline + H2O = ajmaline + acetate, and 17-O-acetylnorajmaline + H2O = norajmaline + acetate.","definition_xrefs":["EC:3.1.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"acetylajmaline esterase activity","secondary_identifiers":["MetaCyc:RXN-8222","MetaCyc:RXN-8220"],"synonyms":[{"name":"17-O-acetylajmaline O-acetylhydrolase activity","type":"related"},{"name":"2beta(R)-17-O-acetylajmalan:acetylesterase activity","type":"related"},{"name":"AAE","type":"related"},{"name":"acetylajmalan esterase activity","type":"related"}],"termid":"GO:0033879"}


id: PR:G2TRP6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B-like protein new16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.13","synonyms":[{"name":"Spom972h-new16","type":"exact"}],"termid":"PR:G2TRP6"}


id: PBO:0013777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mst2/NuA4 histone acetyltransferase complex subunit Eaf6","termid":"PBO:0013777"}


id: GO:0005865
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofilament","termid":"GO:0036379"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"striated muscle thin filament","termid":"GO:0005865"}


id: GO:0097457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon of a hippocampal granule cell, including dentate gyrus granule cell and CA3 granule cell, characterized by expansions (mossy fiber expansions) giving the fibers a mossy appearance. These unmyelinated axons were first described by Ramon y Cajal.","definition_xrefs":["PMID:20554881","PMID:17765709","NIF_Subcellular:nlx_subcell_100312","PMID:24336151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hippocampal mossy fiber","termid":"GO:0097457"}


id: PR:O42649
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR18937:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.09c","secondary_identifiers":["UniProtKB:O42649"],"synonyms":[{"name":"SPAC10F6.09c","type":"related"},{"name":"Spom972h-SMC3","type":"exact"},{"name":"cohesin complex Psm3 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"smc3","type":"related"}],"termid":"PR:O42649"}


id: PBO:0052785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 24","termid":"PBO:0052785"}


id: SO:0000425
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The long terminal repeat found at the five-prime end of the sequence to be inserted into the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_LTR","synonyms":[{"name":"5' LTR","type":"exact"},{"name":"5' long terminal repeat","type":"exact"},{"name":"five prime LTR","type":"exact"}],"termid":"SO:0000425"}


id: PBO:0065248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20A","termid":"PBO:0065248"}


id: GO:0030301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cholesterol transport","termid":"GO:0030301"}


id: PBO:0055435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2865","termid":"PBO:0055435"}


id: PATO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"},{"relation_name":"is_a","term_name":"increased quality","termid":"PATO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased intensity","synonyms":[{"name":"high intensity","type":"exact"}],"termid":"PATO:0001782"}


id: PBO:0070753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 9","termid":"PBO:0070753"}


id: PBO:0029057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole","termid":"PBO:0029057"}


id: FYPO:0007968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle after normal chromosome separation in which pushing forces exerted by microtubules protruding from the spindle pole bodies displace one of the daughter nuclei to the site of cytokinesis. The septum then physically divides that nucleus into two parts, giving rise to inviable daughter cell.","definition_xrefs":["PomBase:vw","PMID:26031557","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut following normal mitotic chromosome condensation","termid":"FYPO:0001055"},{"relation_name":"output_of","term_name":"long mitotic spindle microtubules protruding beyond spindle pole body","termid":"FYPO:0003787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0000120","FYPO:0000641","FYPO:0000631","FYPO:0000004","FYPO:0000002","FYPO:0005447","FYPO:0000032","FYPO:0002403","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"cut with mitotic spindle microtubules protruding beyond spindle pole body","termid":"FYPO:0007968"}


id: PBO:0079921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase","termid":"PBO:0079921"}


id: PBO:0069336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 596, pseudogene","termid":"PBO:0069336"}


id: PBO:0046287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EML4 antisense RNA 1","termid":"PBO:0046287"}


id: GO:0051949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051942"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","termid":"GO:0051947"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"down regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"negative regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"negative regulation of GABA reuptake","type":"exact"},{"name":"negative regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"negative regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051949"}


id: GO:0003103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of diuresis. Diuresis is the process of renal water excretion.","definition_xrefs":["GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of diuresis (obsolete GO:0003103)","synonyms":[{"name":"positive regulation of diuresis","type":"exact"}],"termid":"GO:0003103"}


id: PBO:0057938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3663 host gene","termid":"PBO:0057938"}


id: GO:1900171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucocorticoid mediated signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid mediated signaling pathway","termid":"GO:1900169"},{"relation_name":"positively_regulates","term_name":"glucocorticoid mediated signaling pathway","termid":"GO:0043402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of glucocorticoid mediated signaling pathway","synonyms":[{"name":"activation of glucocorticoid mediated signaling pathway","type":"narrow"},{"name":"activation of glucocorticoid mediated signalling","type":"narrow"},{"name":"positive regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"up regulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"up regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"up-regulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"up-regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"upregulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"upregulation of glucocorticoid mediated signalling","type":"exact"}],"termid":"GO:1900171"}


id: PBO:0041730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II inhibitor 1","termid":"PBO:0041730"}


id: GO:0002656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to nonself antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction dependent upon immune response","termid":"GO:0002653"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to nonself antigen","termid":"GO:0002655"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to nonself antigen","synonyms":[{"name":"down regulation of tolerance induction to nonself antigen","type":"exact"},{"name":"down-regulation of tolerance induction to nonself antigen","type":"exact"},{"name":"downregulation of tolerance induction to nonself antigen","type":"exact"},{"name":"inhibition of tolerance induction to nonself antigen","type":"narrow"}],"termid":"GO:0002656"}


id: PBO:0070370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 8","termid":"PBO:0070370"}


id: PBO:0075357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 5","termid":"PBO:0075357"}


id: PBO:0069273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 529, pseudogene","termid":"PBO:0069273"}


id: PBO:0048602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone secretagogue receptor","termid":"PBO:0048602"}


id: PR:000035569
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BUB1:BUB3 complex whose components are encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:22660415","PRO:KER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB1:BUB3 complex (Schizosaccharomyces pombe 972h-)","synonyms":[{"name":"Spom972h-(BUB1:BUB3)","type":"exact"}],"termid":"PR:000035569"}


id: PBO:0067050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 70, pseudogene","termid":"PBO:0067050"}


id: PBO:0054794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2208","termid":"PBO:0054794"}


id: GO:0060503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a bud in the lung increases radially.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis elongation","termid":"GO:0003401"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud dilation involved in lung branching","synonyms":[{"name":"bud expansion","type":"exact"}],"termid":"GO:0060503"}


id: PBO:0047889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(p22.2)","termid":"PBO:0047889"}


id: GO:0048446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the petal are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"petal development","termid":"GO:0048441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal morphogenesis","secondary_identifiers":["GO:0048418"],"termid":"GO:0048446"}


id: PBO:0089269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPCC569.09  ortholog, syntenic position","termid":"PBO:0089269"}


id: PBO:0065428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 1","termid":"PBO:0065428"}


id: PBO:0085659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mRNA splicing; contains a consensus nuclear export signal (NES) sequence similar to the consensus sequence recognized by Crm1p; interacts genetically with Prp40p and Tgs1p; contains WD40 repeats","termid":"PBO:0085659"}


id: GO:0044001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of an organism from one place to another within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"migration in host","synonyms":[{"name":"migration within host","type":"exact"}],"termid":"GO:0044001"}


id: GO:1990817
data:
  {"annotated_genes":["SJAG_00797","SJAG_03257","SJAG_04946","SJAG_02720","SJAG_01176","SJAG_02725","SJAG_02383","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68034,84555,87799,92383,96213,99950,107408,114062],"is_not":false,"summary":null,"term":"GO:1990817"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA(n) = diphosphate + RNA(n)-3'-adenine ribonucleotide. The primer may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group.","definition_xrefs":["PMID:13965521","RHEA:11332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01176":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02720":null,"SJAG_02725":null,"SJAG_03257":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"poly(A) RNA polymerase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN","Reactome:R-HSA-72185","Reactome:R-HSA-9833031","EC:2.7.7.19"],"synonyms":[{"name":"NTP polymerase activity","type":"broad"},{"name":"RNA adenylating enzyme","type":"exact"},{"name":"RNA adenyltransferase activity","type":"exact"},{"name":"RNA adenylyltransferase activity","type":"exact"},{"name":"poly(A) polymerase activity","type":"related"},{"name":"polynucleotide adenylyltransferase activity","type":"exact"}],"termid":"GO:1990817","terms_by_termid":{"GO:1990817":null}}


id: PBO:0068913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 156, pseudogene","termid":"PBO:0068913"}


id: GO:0051089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proteolytic cleavage of transmembrane proteins and release of their ectodomain that occurs constantly, regardless of environmental conditions or demands.","definition_xrefs":["PMID:12714508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein ectodomain proteolysis","termid":"GO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"constitutive protein ectodomain proteolysis","termid":"GO:0051089"}


id: GO:0120020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes cholesterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:20823909","PMID:24220498","GOC:krc","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transfer activity","termid":"GO:0120015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0120013"],"is_obsolete":false,"name":"cholesterol transfer activity","secondary_identifiers":["Reactome:R-HSA-266082","Reactome:R-HSA-265545","Reactome:R-HSA-5682111","Reactome:R-HSA-216723","GO:0017127","Reactome:R-HSA-8951850","Reactome:R-HSA-265443","Reactome:R-HSA-1454928"],"synonyms":[{"name":"cholesterol carrier activity","type":"exact"},{"name":"cholesterol transporter activity","type":"broad"},{"name":"intermembrane cholesterol transfer activity","type":"narrow"}],"termid":"GO:0120020"}


id: GO:0035352
data:
  {"annotated_genes":["SJAG_04328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The process in which a nicotinamide adenine dinucleotide is transported across a membrane; transport may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD transport","termid":"GO:0043132"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"NAD transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD membrane transport","type":"exact"}],"termid":"GO:0035352","terms_by_termid":{"GO:1990549":null}}


id: PBO:0064817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 10","termid":"PBO:0064817"}


id: SO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Describes the natural sequence variants due to polymorphisms, disease-associated mutations, RNA editing and variations between strains, isolates or cultivars.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_variation_site","termid":"SO:0001146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"natural_variant_site","secondary_identifiers":["BS:00071"],"synonyms":[{"name":"natural_variant","type":"broad"},{"name":"sequence variation","type":"broad"},{"name":"variant","type":"broad"}],"termid":"SO:0001147"}


id: PBO:0017601
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OxySterol binding protein Homolog","termid":"PBO:0017601"}


id: PBO:0029284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle","termid":"PBO:0029284"}


id: PBO:0084432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; encoded within the complex locus MAL4","termid":"PBO:0084432"}


id: GO:0006516
data:
  {"annotated_genes":["SJAG_03032","SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89671,91844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"},{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"glycoprotein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycoprotein breakdown","type":"exact"},{"name":"glycoprotein catabolism","type":"exact"},{"name":"glycoprotein degradation","type":"exact"}],"termid":"GO:0006516","terms_by_termid":{"GO:0097466":null}}


id: GO:0048476
data:
  {"annotated_genes":["SJAG_01044","SJAG_00623"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97633,113189],"is_not":false,"summary":null,"term":"GO:0048476"}]},"cv_name":"cellular_component","definition":"An endodeoxyribonuclease complex that resolves the 4-way DNA intermediates of a Holliday junction into two separate duplex DNA molecules. Can be branch-migration associated.","definition_xrefs":["PMID:11207366","PMID:12374758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Holliday junction resolvase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mus81-Eme1 complex","type":"narrow"},{"name":"Mus81-Eme1 holliday resolvase complex","type":"narrow"},{"name":"Mus81-Eme2 complex","type":"narrow"},{"name":"Mus81-Eme2 holliday resolvase complex","type":"narrow"},{"name":"resolvasome","type":"exact"}],"termid":"GO:0048476","terms_by_termid":{"GO:0048476":null}}


id: FYPO:0005040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["GO:0071620","PomBase:mah","PMID:22144909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen starvation","synonyms":[{"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen deprivation","type":"exact"},{"name":"normal phosphorylation of RNA polymerase II CTD serine 2 residues during nitrogen depletion","type":"exact"}],"termid":"FYPO:0005040"}


id: PR:000027578
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed methylated form that is recognized by the HP1-like protein Swi6 in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00663.","definition_xrefs":["PMID:11242054","PomBase:MAH","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me(K9)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K9me","type":"exact"},{"name":"hht1/InitMet-/Me:(K10)","type":"exact"},{"name":"hht1/Me(K9)","type":"exact"}],"termid":"PR:000027578"}


id: PBO:0062733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily D member 1","termid":"PBO:0062733"}


id: PBO:0043609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 2","termid":"PBO:0043609"}


id: PR:Q10212
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MEMO1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01586","PANTHER:PTHR11060:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 family protein C4H3.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.04c","secondary_identifiers":["UniProtKB:Q10212"],"synonyms":[{"name":"Spom972h-MEMO1","type":"exact"}],"termid":"PR:Q10212"}


id: GO:0044426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall part (obsolete GO:0044426)","termid":"GO:0044426"}


id: GO:0080046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to the 4'-hydroxy group of a quercetin molecule.","definition_xrefs":["PMID:15352060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"quercetin 4'-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-10788"],"termid":"GO:0080046"}


id: PBO:0070761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 17","termid":"PBO:0070761"}


id: PBO:0002124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally silent transcript from tco1 locus","termid":"PBO:0002124"}


id: GO:0046108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving uridine, uracil riboside, a ribonucleoside very widely distributed but occurring almost entirely as phosphoric esters in ribonucleotides and ribonucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside metabolic process","termid":"GO:0046131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"uridine metabolic process","synonyms":[{"name":"uridine metabolism","type":"exact"}],"termid":"GO:0046108"}


id: GO:1900767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fonsecin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone metabolic process","termid":"GO:1900785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fonsecin metabolic process","synonyms":[{"name":"fonsecin metabolism","type":"exact"}],"termid":"GO:1900767"}


id: GO:0045177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical part of cell","synonyms":[{"name":"apical region of cell","type":"exact"}],"termid":"GO:0045177"}


id: GO:1900198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of penicillin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of penicillin metabolic process","termid":"GO:0033246"},{"relation_name":"is_a","term_name":"regulation of penicillin biosynthetic process","termid":"GO:1900196"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"penicillin biosynthetic process","termid":"GO:0042318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"positive regulation of penicillin biosynthetic process","synonyms":[{"name":"activation of penicillin anabolism","type":"exact"},{"name":"activation of penicillin biosynthesis","type":"exact"},{"name":"activation of penicillin biosynthetic process","type":"narrow"},{"name":"activation of penicillin formation","type":"exact"},{"name":"activation of penicillin synthesis","type":"exact"},{"name":"positive regulation of penicillin anabolism","type":"exact"},{"name":"positive regulation of penicillin biosynthesis","type":"exact"},{"name":"positive regulation of penicillin formation","type":"exact"},{"name":"positive regulation of penicillin synthesis","type":"exact"},{"name":"up regulation of penicillin anabolism","type":"exact"},{"name":"up regulation of penicillin biosynthesis","type":"exact"},{"name":"up regulation of penicillin biosynthetic process","type":"exact"},{"name":"up regulation of penicillin formation","type":"exact"},{"name":"up regulation of penicillin synthesis","type":"exact"},{"name":"up-regulation of penicillin anabolism","type":"exact"},{"name":"up-regulation of penicillin biosynthesis","type":"exact"},{"name":"up-regulation of penicillin biosynthetic process","type":"exact"},{"name":"up-regulation of penicillin formation","type":"exact"},{"name":"up-regulation of penicillin synthesis","type":"exact"},{"name":"upregulation of penicillin anabolism","type":"exact"},{"name":"upregulation of penicillin biosynthesis","type":"exact"},{"name":"upregulation of penicillin biosynthetic process","type":"exact"},{"name":"upregulation of penicillin formation","type":"exact"},{"name":"upregulation of penicillin synthesis","type":"exact"}],"termid":"GO:1900198"}


id: PBO:0030589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_arginine_level","termid":"PBO:0030589"}


id: PBO:0035702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4-K16_acetylation_during_vegetative_growth","termid":"PBO:0035702"}


id: GO:1904137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in notochord morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:24892953","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of convergent extension involved in gastrulation","termid":"GO:1904104"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in notochord morphogenesis","termid":"GO:1904136"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in notochord morphogenesis","synonyms":[{"name":"down regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"down-regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"downregulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"inhibition of convergent extension involved in notochord morphogenesis","type":"narrow"}],"termid":"GO:1904137"}


id: GO:1900208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiolipin metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of cardiolipin metabolic process","synonyms":[{"name":"regulation of cardiolipin metabolism","type":"exact"},{"name":"regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"regulation of diphosphatidylglycerol metabolism","type":"related"}],"termid":"GO:1900208"}


id: GO:0033422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CCC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"CCC codon-amino acid adaptor activity","synonyms":[{"name":"proline tRNA","type":"related"}],"termid":"GO:0033422"}


id: PBO:0047604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile histidine triad diadenosine triphosphatase","termid":"PBO:0047604"}


id: GO:0010100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, reduces or prevents photomorphogenesis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photomorphogenesis","termid":"GO:0010099"},{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"photomorphogenesis","termid":"GO:0009640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of photomorphogenesis","synonyms":[{"name":"down regulation of photomorphogenesis","type":"exact"},{"name":"down-regulation of photomorphogenesis","type":"exact"},{"name":"downregulation of photomorphogenesis","type":"exact"},{"name":"inhibition of photomorphogenesis","type":"narrow"}],"termid":"GO:0010100"}


id: PBO:0017745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1-type Uba5 (predicted)","termid":"PBO:0017745"}


id: GO:1900680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferricrocin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ferricrocin biosynthetic process","termid":"GO:1900678"},{"relation_name":"is_a","term_name":"positive regulation of ferrichrome biosynthetic process","termid":"GO:1905570"},{"relation_name":"positively_regulates","term_name":"ferricrocin biosynthetic process","termid":"GO:0031171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of ferricrocin biosynthetic process","synonyms":[{"name":"activation of ferricrocin anabolism","type":"exact"},{"name":"activation of ferricrocin biosynthesis","type":"exact"},{"name":"activation of ferricrocin biosynthetic process","type":"narrow"},{"name":"activation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of ferricrocin formation","type":"exact"},{"name":"activation of ferricrocin synthesis","type":"exact"},{"name":"positive regulation of ferricrocin anabolism","type":"exact"},{"name":"positive regulation of ferricrocin biosynthesis","type":"exact"},{"name":"positive regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of ferricrocin formation","type":"exact"},{"name":"positive regulation of ferricrocin synthesis","type":"exact"},{"name":"up regulation of ferricrocin anabolism","type":"exact"},{"name":"up regulation of ferricrocin biosynthesis","type":"exact"},{"name":"up regulation of ferricrocin biosynthetic process","type":"exact"},{"name":"up regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of ferricrocin formation","type":"exact"},{"name":"up regulation of ferricrocin synthesis","type":"exact"},{"name":"up-regulation of ferricrocin anabolism","type":"exact"},{"name":"up-regulation of ferricrocin biosynthesis","type":"exact"},{"name":"up-regulation of ferricrocin biosynthetic process","type":"exact"},{"name":"up-regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of ferricrocin formation","type":"exact"},{"name":"up-regulation of ferricrocin synthesis","type":"exact"},{"name":"upregulation of ferricrocin anabolism","type":"exact"},{"name":"upregulation of ferricrocin biosynthesis","type":"exact"},{"name":"upregulation of ferricrocin biosynthetic process","type":"exact"},{"name":"upregulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of ferricrocin formation","type":"exact"},{"name":"upregulation of ferricrocin synthesis","type":"exact"}],"termid":"GO:1900680"}


id: PBO:0089247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in vesicle docking Pep5/Vps11-like","termid":"PBO:0089247"}


id: PBO:0069816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1102, pseudogene","termid":"PBO:0069816"}


id: GO:0072743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an erythromycin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to erythromycin","termid":"GO:1901323"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to erythromycin","termid":"GO:0072743"}


id: GO:0043942
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042174"},{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"negatively_regulates","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043942","terms_by_termid":{"GO:0075297":null}}


id: FYPO:0000231
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115212],"is_not":false,"summary":null,"term":"FYPO:0000231"}],"single_locus_phenotype":[{"annotations":[115205],"is_not":false,"summary":null,"term":"FYPO:0000231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which myosin filaments are not localized normally within the actomyosin contractile ring.","definition_xrefs":["PMID:19713940","GO:2000708","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_03596":null},"genotype_count":2,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0004803","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_01143"],"name":"abnormal actomyosin contractile ring myosin filament organization","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_03596"],"single_locus_genotype_uniquenames":["cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal actomyosin contractile ring myosin filament organisation","type":"exact"},{"name":"abnormal actomyosin contractile ring myosin filament organization during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring myosin filament organization during vegetative growth","type":"exact"},{"name":"abnormal cytokinetic contractile ring myosin filament organization","type":"exact"},{"name":"abnormal mitotic contractile ring myosin filament organization","type":"exact"},{"name":"cytokinesis defects, contractile ring myosin distribution, defective","type":"related"}],"termid":"FYPO:0000231","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000231":null,"FYPO_EXT:0000001":null}}


id: PBO:0109031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KBTBD6 divergent transcript","termid":"PBO:0109031"}


id: PBO:0055926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A14, pseudogene","termid":"PBO:0055926"}


id: GO:0045329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"carnitine metabolic process","termid":"GO:0009437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carnitine biosynthetic process","synonyms":[{"name":"carnitine anabolism","type":"exact"},{"name":"carnitine biosynthesis","type":"exact"},{"name":"carnitine formation","type":"exact"},{"name":"carnitine synthesis","type":"exact"},{"name":"vitamin Bt biosynthesis","type":"exact"},{"name":"vitamin Bt biosynthetic process","type":"exact"}],"termid":"GO:0045329"}


id: PBO:0060822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECAP endocytosis associated 2","termid":"PBO:0060822"}


id: GO:1904520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myofibroblast cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26119034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"myofibroblast cell apoptotic process","termid":"GO:1904516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myofibroblast cell apoptotic process","synonyms":[{"name":"regulation of MFB apoptosis","type":"narrow"},{"name":"regulation of MFB apoptotic process","type":"exact"},{"name":"regulation of myofibroblast cell apoptosis","type":"narrow"}],"termid":"GO:1904520"}


id: PBO:0091270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein Gep3","termid":"PBO:0091270"}


id: FYPO:0004625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which post-anaphase microtubule array organization is abnormal. Post-anaphase microtubule array organization is a cellular process that results in the assembly, arrangement of constituent parts, or disassembly of the post-anaphase microtubule array.","definition_xrefs":["PomBase:mah","PMID:1904186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal post-anaphase microtubule array organization","synonyms":[{"name":"abnormal PAA organization","type":"exact"},{"name":"abnormal post-anaphase array organization","type":"exact"},{"name":"abnormal post-anaphase microtubule array organisation","type":"exact"},{"name":"abnormal post-anaphase microtubule array organization during mitotic cell cycle","type":"related"},{"name":"abnormal post-anaphase microtubule array organization during vegetative growth","type":"exact"}],"termid":"FYPO:0004625"}


id: GO:0051961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of nervous system development","termid":"GO:0051960"},{"relation_name":"negatively_regulates","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nervous system development","synonyms":[{"name":"down regulation of nervous system development","type":"exact"},{"name":"down-regulation of nervous system development","type":"exact"},{"name":"downregulation of nervous system development","type":"exact"},{"name":"inhibition of nervous system development","type":"narrow"}],"termid":"GO:0051961"}


id: PBO:0051374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3/OR2-5 (pseudogene)","termid":"PBO:0051374"}


id: PR:Q9URY7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC869.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URY7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formamidase C869.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.04","synonyms":[{"name":"Spom972h-SPAC869.04","type":"exact"},{"name":"formamide amidohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URY7"}


id: PBO:0081355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 180","termid":"PBO:0081355"}


id: PBO:0036393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein; involved in phospholipid metabolism Ups2 (predicted)","termid":"PBO:0036393"}


id: PR:Q9P7W1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1703.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7W1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1703.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.09","synonyms":[{"name":"Spom972h-SPBC1703.09","type":"exact"}],"termid":"PR:Q9P7W1"}


id: PBO:0043445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 6","termid":"PBO:0043445"}


id: GO:1904515
data:
  {"annotated_genes":["SJAG_00143","SJAG_05030","SJAG_06588"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87328,93881,103100],"is_not":false,"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TORC2 signaling.","definition_xrefs":["PMID:25590601","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of TOR signaling","termid":"GO:0032008"},{"relation_name":"is_a","term_name":"regulation of TORC2 signaling","termid":"GO:1903939"},{"relation_name":"positively_regulates","term_name":"TORC2 signaling","termid":"GO:0038203"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_05030":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of TORC2 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of TORC2 signal transduction","type":"narrow"},{"name":"activation of TORC2 signaling","type":"narrow"},{"name":"positive regulation of TORC2 signal transduction","type":"exact"},{"name":"up regulation of TORC2 signal transduction","type":"exact"},{"name":"up regulation of TORC2 signaling","type":"exact"},{"name":"up-regulation of TORC2 signal transduction","type":"exact"},{"name":"up-regulation of TORC2 signaling","type":"exact"},{"name":"upregulation of TORC2 signal transduction","type":"exact"},{"name":"upregulation of TORC2 signaling","type":"exact"}],"termid":"GO:1904515","terms_by_termid":{"GO:1904515":null}}


id: FYPO:0005638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during the first meiotic nuclear division results in the connection of a single kinetochore to both spindle poles.","definition_xrefs":["PMID:21920317","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore during meiosis I","termid":"FYPO:0000209"},{"relation_name":"is_a","term_name":"merotelic kinetochore attachment","termid":"FYPO:0002651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"merotelic kinetochore attachment during meiosis I","synonyms":[{"name":"merotelic attachment of spindle microtubules to kinetochore during meiosis I","type":"exact"},{"name":"merotelic kinetochore attachment during M phase of meiosis I","type":"exact"},{"name":"merotelic kinetochore attachment during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005638"}


id: PBO:0065930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 4","termid":"PBO:0065930"}


id: PATO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male fertility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male fertile","termid":"PATO:0000891"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased male fertility","synonyms":[{"name":"high male fertility","type":"exact"}],"termid":"PATO:0001832"}


id: SOFP:source
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Source from which feature originates - may be a computer program or analysis, or a group. Corresponds to GFF column 2","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source","termid":"SOFP:source"}


id: GO:0061869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell migration.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast migration","termid":"GO:0010762"},{"relation_name":"regulates","term_name":"hepatic stellate cell migration","termid":"GO:0061868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell migration","termid":"GO:0061869"}


id: PBO:0111346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Sof1","termid":"PBO:0111346"}


id: GO:0001223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription coactivator, a protein involved in positive regulation of transcription via protein-protein interactions with transcription factors and other proteins that positively regulate transcription. Transcription coactivators do not bind DNA directly, but rather mediate protein-protein interactions between activating transcription factors and the basal transcription machinery.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coregulator binding","termid":"GO:0001221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"transcription coactivator binding","secondary_identifiers":["GO:0001225"],"synonyms":[{"name":"RNA polymerase II transcription coactivator binding","type":"related"}],"termid":"GO:0001223"}


id: PBO:0072066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 4","termid":"PBO:0072066"}


id: PBO:0049176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor receptor bound protein 14","termid":"PBO:0049176"}


id: PBO:0051886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin alpha FG-GAP repeat containing 1","termid":"PBO:0051886"}


id: GO:0034896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-formiminopyruvate + H2O = 3-formylpyruvate + HN3.","definition_xrefs":["UM-BBD_reactionID:r1400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"3-formiminopyruvate hydrolase activity","termid":"GO:0034896"}


id: PBO:0079495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 16","termid":"PBO:0079495"}


id: PR:Q9UT39
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 82 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00689","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C824.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.04","secondary_identifiers":["UniProtKB:Q9UT39"],"synonyms":[{"name":"Spom972h-WDR82","type":"exact"}],"termid":"PR:Q9UT39"}


id: GO:1902205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-2-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:11909529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-2-mediated signaling pathway","termid":"GO:0038110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of interleukin-2-mediated signaling pathway","synonyms":[{"name":"regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:1902205"}


id: PATO:0005005
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Shape quality inhering in a bearer expanding outward, or having parts expanding outward, from a center point.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiating","termid":"PATO:0005005"}


id: PBO:0089622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp18","termid":"PBO:0089622"}


id: PBO:0082686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the GARP (Golgi-associated retrograde protein) complex; GARP is required for the recycling of proteins from endosomes to the late Golgi, and for mitosis after DNA damage induced checkpoint arrest; links the (VFT/GARP) complex to the SNARE Tlg1p; members of the GARP complex are Vps51p-Vps52p-Vps53p-Vps54p","termid":"PBO:0082686"}


id: PBO:0041318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 4","termid":"PBO:0041318"}


id: PBO:0052215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 2","termid":"PBO:0052215"}


id: FYPO:0000651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of septum assembly","secondary_identifiers":["FYPO:0000649"],"synonyms":[{"name":"increased division septum formation involved in mitotic cytokinesis","type":"related"},{"name":"increased duration of division septum assembly","type":"exact"},{"name":"increased duration of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"increased duration of septation","type":"broad"},{"name":"increased duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"increased duration of septum assembly during vegetative growth","type":"exact"},{"name":"increased duration of septum formation","type":"broad"},{"name":"increased septation","type":"related"},{"name":"increased septum formation","type":"related"},{"name":"prolonged septum assembly","type":"exact"}],"termid":"FYPO:0000651"}


id: PATO:0000927
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to being sensitivity to the action of radiant energy.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photosensitivity","termid":"PATO:0000927"}


id: GO:0046754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The exit of a fully formed virion particles from the host cell by exocytosis via a host vesicle.","definition_xrefs":["ISBN:0072370319","PMID:33157038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-lytic viral release","termid":"GO:0046753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral exocytosis","synonyms":[{"name":"viral egress by exocytosis","type":"exact"}],"termid":"GO:0046754"}


id: GO:1903984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["PMID:24939851","GOC:PARL","GOC:bf","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902043"},{"relation_name":"is_a","term_name":"regulation of TRAIL-activated apoptotic signaling pathway","termid":"GO:1903121"},{"relation_name":"positively_regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"activation of TRAIL-activated apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-induced apoptotic signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"narrow"},{"name":"positive regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"upregulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903984"}


id: PBO:0084335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-related motor protein involved in mitotic spindle positioning; stabilizes microtubules by targeting Bik1p to the plus end; functions as a microtubule polymerase and catastrophe inhibitor in vitro; Kip2p levels are controlled during the cell cycle","termid":"PBO:0084335"}


id: GO:0050279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sepiapterin + H2O = xanthopterin-B2 + NH3.","definition_xrefs":["EC:3.5.4.24","MetaCyc:SEPIAPTERIN-DEAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"sepiapterin deaminase activity","secondary_identifiers":["RHEA:14025"],"synonyms":[{"name":"sepiapterin aminohydrolase activity","type":"related"}],"termid":"GO:0050279"}


