# terms

id: GO:1904655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lung alveolus development.","definition_xrefs":["PMID:23962064","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lung alveolus development","termid":"GO:1904653"},{"relation_name":"positively_regulates","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lung alveolus development","synonyms":[{"name":"activation of alveolarization","type":"narrow"},{"name":"activation of alveologenesis","type":"narrow"},{"name":"activation of lung alveolus development","type":"narrow"},{"name":"positive regulation of alveolarization","type":"exact"},{"name":"positive regulation of alveologenesis","type":"exact"},{"name":"up regulation of alveolarization","type":"exact"},{"name":"up regulation of alveologenesis","type":"exact"},{"name":"up regulation of lung alveolus development","type":"exact"},{"name":"up-regulation of alveolarization","type":"exact"},{"name":"up-regulation of alveologenesis","type":"exact"},{"name":"up-regulation of lung alveolus development","type":"exact"},{"name":"upregulation of alveolarization","type":"exact"},{"name":"upregulation of alveologenesis","type":"exact"},{"name":"upregulation of lung alveolus development","type":"exact"}],"termid":"GO:1904655"}


id: GO:0042170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a plastid and form the plastid envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"plastid envelope","termid":"GO:0009526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid membrane","termid":"GO:0042170"}


id: GO:0044229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic) and outer host membrane (Gram-negative Bacteria) or inner host membrane and host cell wall (Fungi).","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell periplasmic space","termid":"GO:0044229"}


id: SO:1001194
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001194 alternatively_spliced_gene_encoding_greater_than_1_polypeptide_coding_regions_overlapping (obsolete SO:1001194)","termid":"SO:1001194"}


id: PBO:0060823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 1","termid":"PBO:0060823"}


id: GO:0090120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, or cholesterol-containing compounds, from the lysosome to the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"vesicle-mediated cholesterol transport","termid":"GO:0090119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lysosome to ER cholesterol transport","synonyms":[{"name":"lysosome to endoplasmic reticulum cholesterol transport","type":"exact"}],"termid":"GO:0090120"}


id: PBO:0075857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 5","termid":"PBO:0075857"}


id: GO:0004001
data:
  {"annotated_genes":["SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112945],"is_not":false,"summary":null,"term":"GO:0004001"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + adenosine = ADP + AMP.","definition_xrefs":["PMID:11223943","EC:2.7.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"adenosine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ADENOSINE-KINASE-RXN","RHEA:20824","Reactome:R-HSA-109624","Reactome:R-HSA-9754974"],"synonyms":[{"name":"adenosine kinase (phosphorylating)","type":"related"},{"name":"ATP:adenosine 5'-phosphotransferase activity","type":"related"},{"name":"adenosine 5-phosphotransferase activity","type":"exact"}],"termid":"GO:0004001","terms_by_termid":{"GO:0004001":null}}


id: PBO:0044410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily G member 1, pseudogene","termid":"PBO:0044410"}


id: GO:0060819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by genomic imprinting.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of X chromosome by genomic imprinting (obsolete GO:0060819)","synonyms":[{"name":"inactivation of X chromosome by genetic imprinting","type":"related"}],"termid":"GO:0060819"}


id: PBO:0064393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase","termid":"PBO:0064393"}


id: PBO:0042387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300e molecule","termid":"PBO:0042387"}


id: PBO:0055724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin tail domain containing 1","termid":"PBO:0055724"}


id: GO:0031064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the removal of acetyl groups from histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylation (obsolete GO:0031064)","synonyms":[{"name":"down regulation of histone deacetylation","type":"exact"},{"name":"down-regulation of histone deacetylation","type":"exact"},{"name":"downregulation of histone deacetylation","type":"exact"},{"name":"inhibition of histone deacetylation","type":"narrow"}],"termid":"GO:0031064"}


id: PBO:0046365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 2","termid":"PBO:0046365"}


id: PR:O94709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdx1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase protein X component, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.09c","synonyms":[{"name":"Spom972h-pdx1","type":"exact"},{"name":"dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94709"}


id: GO:0060653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell becomes a more specialized epithelial cell of the mammary gland cord. Epithelial cells of the mammary cord give it its funnel-like shape and some are cornified.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell differentiation","termid":"GO:0060644"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in mammary gland cord morphogenesis","synonyms":[{"name":"epithelial cell differentiation involved in mammary gland sprout morphogenesis","type":"related"}],"termid":"GO:0060653"}


id: PBO:0085896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; localizes to the cytoplasm and nucleus; overexpression affects protein trafficking through the endocytic pathway","termid":"PBO:0085896"}


id: FYPO:0006410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of nitric oxide measured in a cell is lower than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular nitric oxide level","termid":"FYPO:0006408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular nitric oxide level during stationary phase","synonyms":[{"name":"decreased cellular NO level during stationary phase","type":"exact"},{"name":"decreased cellular nitric oxide level in stationary phase","type":"exact"},{"name":"decreased nitric oxide accumulation during stationary phase","type":"related"},{"name":"reduced cellular nitric oxide level during stationary phase","type":"exact"}],"termid":"FYPO:0006410"}


id: PBO:0087543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of ribosome-associated quality control trigger complex (RQT); putative RNA helicase related to Ski2p; involved in translation inhibition of non-poly(A) mRNAs; required for repressing propagation of dsRNA viruses; human homolog is ASCC3","termid":"PBO:0087543"}


id: GO:1903482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin filament organization involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:mtg_cell_cycle","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1903482)","synonyms":[{"name":"activation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"activation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"activation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"positive regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"positive regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up-regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up-regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up-regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"upregulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"upregulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"upregulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903482"}


id: PR:O14106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgg8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rgg8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.06","synonyms":[{"name":"Spom972h-rgg8","type":"exact"}],"termid":"PR:O14106"}


id: PBO:0003100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Pep12","termid":"PBO:0003100"}


id: GO:0099532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which synaptic vesicles fuse to the presynaptic endosome followed by sorting of synaptic vesicle components and budding of new synaptic vesicles.","definition_xrefs":["GOC:bc","GOC:aruk","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"synaptic vesicle endosomal processing","synonyms":[{"name":"synaptic vesicle processing via endosome","type":"exact"}],"termid":"GO:0099532"}


id: GO:0004063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aryl dialkyl phosphate + H2O = dialkyl phosphate + an aryl alcohol.","definition_xrefs":["EC:3.1.8.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric triester hydrolase activity","termid":"GO:0016795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"aryldialkylphosphatase activity","secondary_identifiers":["UM-BBD_enzymeID:e0054","MetaCyc:ARYLDIALKYLPHOSPHATASE-RXN","RHEA:18053"],"synonyms":[{"name":"A-esterase activity","type":"broad"},{"name":"OPH","type":"related"},{"name":"aryltriphosphatase activity","type":"related"},{"name":"aryltriphosphate dialkylphosphohydrolase activity","type":"exact"},{"name":"esterase B1","type":"related"},{"name":"esterase E4","type":"related"},{"name":"organophosphate esterase activity","type":"broad"},{"name":"organophosphate hydrolase activity","type":"broad"},{"name":"organophosphorus acid anhydrase activity","type":"broad"},{"name":"organophosphorus hydrolase activity","type":"broad"},{"name":"paraoxon esterase activity","type":"narrow"},{"name":"paraoxon hydrolase activity","type":"broad"},{"name":"paraoxonase activity","type":"broad"},{"name":"phosphotriesterase activity","type":"narrow"},{"name":"pirimiphos-methyloxon esterase activity","type":"narrow"}],"termid":"GO:0004063"}


id: PBO:0046120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 3","termid":"PBO:0046120"}


id: PATO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nutritional quality inhering in a bearer by virtue of the bearer's ability to synthesize a particular organic compound required for its growth.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Prototrophic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trophic quality","termid":"PATO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prototrophic","termid":"PATO:0000423"}


id: GO:0042452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyguanosine, a nucleoside consisting of the base guanine and the sugar deoxyribose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyguanosine metabolic process","termid":"GO:0042453"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside biosynthetic process","termid":"GO:0046123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxyguanosine biosynthetic process","synonyms":[{"name":"deoxyguanosine anabolism","type":"exact"},{"name":"deoxyguanosine biosynthesis","type":"exact"},{"name":"deoxyguanosine formation","type":"exact"},{"name":"deoxyguanosine synthesis","type":"exact"}],"termid":"GO:0042452"}


id: GO:0005522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"profilin binding","termid":"GO:0005522"}


id: PBO:0013097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead transcription factor Sep1","termid":"PBO:0013097"}


id: GO:1901463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"regulation of tetrapyrrole anabolism","type":"exact"},{"name":"regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"regulation of tetrapyrrole formation","type":"exact"},{"name":"regulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901463"}


id: PBO:0089720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase non-catalytic subunit Gcd10","termid":"PBO:0089720"}


id: PBO:0078497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 1-1","termid":"PBO:0078497"}


id: PBO:0077799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin family 2 member A","termid":"PBO:0077799"}


id: GO:0005625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete soluble fraction (obsolete GO:0005625)","synonyms":[{"name":"soluble","type":"broad"},{"name":"soluble fraction","type":"exact"}],"termid":"GO:0005625"}


id: PBO:0083021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; included in the original annotation of Chromosome III but deleted due to sequence correction","termid":"PBO:0083021"}


id: PBO:0066263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 3","termid":"PBO:0066263"}


id: GO:1904570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine incorporation.","definition_xrefs":["PMID:21685449","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"regulation of selenocysteine incorporation","termid":"GO:1904569"},{"relation_name":"negatively_regulates","term_name":"selenocysteine incorporation","termid":"GO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of selenocysteine incorporation","synonyms":[{"name":"down regulation of selenocysteine incorporation","type":"exact"},{"name":"down-regulation of selenocysteine incorporation","type":"exact"},{"name":"downregulation of selenocysteine incorporation","type":"exact"},{"name":"inhibition of selenocysteine incorporation","type":"narrow"}],"termid":"GO:1904570"}


id: PATO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000991 inconsistent (obsolete PATO:0000991)","termid":"PATO:0000991"}


id: GO:0008116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = prostaglandin I(2).","definition_xrefs":["RHEA:23580","EC:5.3.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"prostaglandin-I synthase activity","secondary_identifiers":["Reactome:R-HSA-76496","KEGG_REACTION:R02267","MetaCyc:PROSTAGLANDIN-I-SYNTHASE-RXN"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate 6-isomerase activity","type":"related"},{"name":"PGI(2) synthase activity","type":"related"},{"name":"PGI(2) synthetase activity","type":"related"},{"name":"PGI2 synthase activity","type":"related"},{"name":"PGI2 synthetase activity","type":"related"},{"name":"cytochrome P450 CYP8A1","type":"narrow"},{"name":"prostacyclin synthase activity","type":"related"},{"name":"prostacycline synthetase activity","type":"related"},{"name":"prostagladin I2 synthetase activity","type":"related"}],"termid":"GO:0008116"}


id: GO:0072664
data:
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id: PBO:0049194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor delta type subunit 1","termid":"PBO:0049194"}


id: PBO:0044141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 7","termid":"PBO:0044141"}


id: PBO:0065073
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 antisense RNA 2","termid":"PBO:0065073"}


id: PBO:0031343
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id: PBO:0030490
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id: PBO:0040145
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-silencing function 1B histone chaperone","termid":"PBO:0040145"}


id: PBO:0084786
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id: GO:0047048
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id: GO:1905259
data:
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id: PBO:0110116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane inositol phosphosphingolipid phospholipase C, Css1","termid":"PBO:0110116"}


id: PBO:0067695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 3","termid":"PBO:0067695"}


id: PBO:0058819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7976","termid":"PBO:0058819"}


id: GO:0016070
data:
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id: PBO:0111920
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id: GO:0046501
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id: GO:1902984
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id: GO:0061670
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id: RO:0002156
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id: PBO:0081100
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id: PBO:0004520
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id: PBO:0049511
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id: GO:0030600
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id: PBO:0055277
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id: PBO:0112613
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id: PBO:0108969
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id: PR:O94570
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id: PBO:0077449
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id: PBO:0089100
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id: GO:0010255
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id: PBO:0078892
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id: GO:1905210
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id: GO:0097362
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id: PR:O74969
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity glucose transporter ght2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.08","synonyms":[{"name":"Spom972h-ght2","type":"exact"},{"name":"hexose transporter 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74969"}


id: PBO:0090448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane-associated serine-rich cell wall sensor Mtl2","termid":"PBO:0090448"}


id: GO:0042935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of achromobactin, a citrate siderophore, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:10928541","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"achromobactin transport","termid":"GO:0042935"}


id: PBO:0075206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 18","termid":"PBO:0075206"}


id: PBO:0005757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCM-MHF complex subunit Mhf2","termid":"PBO:0005757"}


id: PBO:0046397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1 like 3","termid":"PBO:0046397"}


id: PBO:0040453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP11A upstream neighbor lncRNA","termid":"PBO:0040453"}


id: PBO:0060690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A1","termid":"PBO:0060690"}


id: PBO:0067791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 93","termid":"PBO:0067791"}


id: GO:1902751
data:
  {"annotated_genes":["SJAG_02592","SJAG_03486","SJAG_01456","SJAG_03602","SJAG_00256","SJAG_04486","SJAG_02342","SJAG_01837","SJAG_00214","SJAG_03309","SJAG_01805","SJAG_00117","SJAG_01000","SJAG_03067","SJAG_04140","SJAG_01901","SJAG_00883","SJAG_00216","SJAG_04597","SJAG_04332","SJAG_03592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97877,112781,90540,90671,99612,88262,84221,107307,87859,94563,104684,112593,89929,103342,92457,84230,95120,90501,106453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[97500,84027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[90672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the cell cycle.","definition_xrefs":["GO_REF:0000058","GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of cell cycle G2/M phase transition","termid":"GO:1902749"},{"relation_name":"positively_regulates","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01456":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_03067":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_04140":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cell cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle G2/M phase transition","type":"narrow"},{"name":"up regulation of cell cycle G2/M phase transition","type":"exact"},{"name":"up-regulation of cell cycle G2/M phase transition","type":"exact"},{"name":"upregulation of cell cycle G2/M phase transition","type":"exact"}],"termid":"GO:1902751","terms_by_termid":{"GO:0010971":null,"GO:0110032":null,"GO:1905287":null}}


id: _global:associated_with
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"associated_with","termid":"_global:associated_with"}


id: GO:0051693
data:
  {"annotated_genes":["SJAG_01894","SJAG_02700","SJAG_00279","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110427,84431,95019,88447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"The binding of a protein or protein complex to the end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.","definition_xrefs":["ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of actin filament depolymerization","termid":"GO:0030835"},{"relation_name":"is_a","term_name":"negative regulation of actin filament polymerization","termid":"GO:0030837"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0065003","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"actin filament capping","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"F-actin capping activity","type":"related"},{"name":"actin capping activity","type":"related"}],"termid":"GO:0051693","terms_by_termid":{"GO:0051016":null}}


id: PBO:0043722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 1","termid":"PBO:0043722"}


id: PBO:0026660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_inositol_starvation","termid":"PBO:0026660"}


id: GO:0046480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 mono-beta-D-galactosyldiacylglycerol = alpha-D-galactosyl-beta-D-galactosyldiacylglycerol + 1,2-diacylglycerol.","definition_xrefs":["EC:2.4.1.184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"galactolipid galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-1226","RHEA:15921"],"synonyms":[{"name":"3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol:mono-3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol beta-D-galactosyltransferase activity","type":"related"},{"name":"DGDG synthase activity","type":"broad"},{"name":"GGGT activity","type":"related"},{"name":"digalactosyldiacylglycerol synthase activity","type":"broad"},{"name":"galactolipid-galactolipid galactosyltransferase activity","type":"related"},{"name":"galactolipid:galactolipid galactosyltransferase activity","type":"exact"},{"name":"interlipid galactosyltransferase activity","type":"related"}],"termid":"GO:0046480"}


id: GO:2000571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-4-dependent isotype switching to IgE isotypes.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isotype switching to IgE isotypes","termid":"GO:0048293"},{"relation_name":"regulates","term_name":"interleukin-4-dependent isotype switching to IgE isotypes","termid":"GO:0035708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0010467","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-4-dependent isotype switching to IgE isotypes","synonyms":[{"name":"regulation of IL-4-dependent isotype switching to IgE isotypes","type":"exact"}],"termid":"GO:2000571"}


id: PBO:0054777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2190","termid":"PBO:0054777"}


id: PBO:0072112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 1","termid":"PBO:0072112"}


id: GO:0098003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a virus tail.","definition_xrefs":["VZ:3955","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral tail assembly","synonyms":[{"name":"bacteriophage tail assembly","type":"narrow"},{"name":"virus tail assembly","type":"exact"}],"termid":"GO:0098003"}


id: GO:0017161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-myo-inositol 1,3,4-trisphosphate + H2O = myo-inositol 1,3-bisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"inositol-1,3,4-trisphosphate 4-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855180","RHEA:43392"],"termid":"GO:0017161"}


id: PBO:0057393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-1","termid":"PBO:0057393"}


id: PBO:0043837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1B","termid":"PBO:0043837"}


id: PBO:0002426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR54b","termid":"PBO:0002426"}


id: GO:0006083
data:
  {"annotated_genes":["SJAG_02769","SJAG_02985","SJAG_02741","SJAG_03786","SJAG_01989"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75618,87568,110451],"is_not":false,"summary":null,"term":"GO:0006083"},{"annotations":[96981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019413"},{"annotations":[112203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01989":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_02985":null,"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"acetate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"acetate metabolism","type":"exact"}],"termid":"GO:0006083","terms_by_termid":{"GO:0006083":null,"GO:0019413":null,"GO:0019427":null}}


id: MOD:01545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01545"}


id: GO:0035147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusing of specific tracheal branches in an open tracheal system to branches from neighboring hemisegments to form a continuous tracheal network. Branch fusion is mediated by individual cells at the tip of each branch, which contact a similar cell and undergo a coordinated series of morphogenetic events that create a bicellular fusion joint.","definition_xrefs":["GOC:mtg_sensu","PMID:14570584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube fusion","termid":"GO:0035146"},{"relation_name":"part_of","term_name":"branching involved in open tracheal system development","termid":"GO:0060446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branch fusion, open tracheal system","synonyms":[{"name":"tracheal branch fusion","type":"exact"}],"termid":"GO:0035147"}


id: PR:O13958
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00633","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase srb10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.17c","secondary_identifiers":["UniProtKB:O13958"],"synonyms":[{"name":"Spom972h-CDK8","type":"exact"},{"name":"cyclin-dependent kinase 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B srb10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13958"}


id: PBO:0082631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of cytosolic iron-sulfur protein assembly (CIA) machinery; acts at a late step of Fe-S cluster assembly; forms the CIA targeting complex with Cia1p and Met18p that directs Fe-S cluster incorporation and maturation of a subset of proteins involved in methionine biosynthesis, DNA replication and repair, transcription, and telomere maintenance; ortholog of human FAM96B","termid":"PBO:0082631"}


id: PBO:0042575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2B","termid":"PBO:0042575"}


id: PBO:0054687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2096","termid":"PBO:0054687"}


id: PBO:0069148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 399, pseudogene","termid":"PBO:0069148"}


id: FYPO:0003663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA pyrophosphohydrolase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal RNA pyrophosphohydrolase activity","termid":"FYPO:0003663"}


id: PBO:0066922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 224","termid":"PBO:0066922"}


id: GO:0047823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + D-glutamine = gamma-D-glutamyl-D-glutamate + NH4+. Can also transfer additional glutamyl residues to a peptide, extending the polypeptide chain.","definition_xrefs":["EC:2.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"D-glutamyltransferase activity","secondary_identifiers":["MetaCyc:D-GLUTAMYLTRANSFERASE-RXN","RHEA:35623"],"synonyms":[{"name":"D-gamma-glutamyl transpeptidase activity","type":"related"},{"name":"D-glutamyl transpeptidase activity","type":"related"},{"name":"glutamine:D-glutamyl-peptide 5-glutamyltransferase activity","type":"related"}],"termid":"GO:0047823"}


id: GO:1901061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guaiacyl lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"guaiacyl lignin metabolic process","synonyms":[{"name":"G-lignin metabolic process","type":"exact"},{"name":"guaiacyl lignin metabolism","type":"exact"}],"termid":"GO:1901061"}


id: PBO:0087284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal recognition particle (SRP) subunit; interacts with the RNA component of SRP to form the Alu domain, which is the region of SRP responsible for arrest of nascent chain elongation during membrane targeting; homolog of mammalian SRP14","termid":"PBO:0087284"}


id: GO:0090275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somatostatin secretion","termid":"GO:0090273"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"somatostatin secretion","termid":"GO:0070253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of somatostatin secretion","termid":"GO:0090275"}


id: PBO:0047125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 168 member B","termid":"PBO:0047125"}


id: PBO:0068608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 59, pseudogene","termid":"PBO:0068608"}


id: PBO:0086851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulatory subunit of protein phosphatase Glc7p; involved in glycogen metabolism; contains a conserved motif (GVNK motif) that is also found in Gac1p, Pig1p, and Pig2p; GIP2 has a paralog, PIG2, that arose from the whole genome duplication","termid":"PBO:0086851"}


id: GO:0007203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol-4,5-bisphosphate hydrolysis (obsolete GO:0007203)","synonyms":[{"name":"phosphatidylinositol-4,5-bisphosphate hydrolysis","type":"exact"}],"termid":"GO:0007203"}


id: PBO:0088329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase Pyp3","termid":"PBO:0088329"}


id: PBO:0018036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTR family peptide transmembrane transporter Ptr2","termid":"PBO:0018036"}


id: SO:1000071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect where the way in which the primary transcriptional product is processed to form the mature transcript, specifically by the removal (splicing) of intron sequences is changed.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000071 sequence_variant_affecting_splicing (obsolete SO:1000071)","synonyms":[{"name":"mutation affecting splicing","type":"related"},{"name":"sequence variant affecting splicing","type":"exact"}],"termid":"SO:1000071"}


id: GO:0097309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the ribose of the first nucleotide of a 5'-capped mRNA.","definition_xrefs":["PMID:20713356","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete cap1 mRNA methylation (obsolete GO:0097309)","synonyms":[{"name":"cap1 mRNA capping","type":"broad"}],"termid":"GO:0097309"}


id: GO:0046313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphoarginine, a phosphorylated derivative of the amino acid arginine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoarginine metabolic process","termid":"GO:0006604"},{"relation_name":"is_a","term_name":"phosphagen catabolic process","termid":"GO:0042397"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"phosphoarginine catabolic process","synonyms":[{"name":"phosphoarginine breakdown","type":"exact"},{"name":"phosphoarginine catabolism","type":"exact"},{"name":"phosphoarginine degradation","type":"exact"}],"termid":"GO:0046313"}


id: GO:0050256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribitol 5-phosphate + NAD(P)+ = D-ribulose 5-phosphate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ribitol-5-phosphate 2-dehydrogenase [(NAD(P)+] activity","secondary_identifiers":["MetaCyc:RIBITOL-5-PHOSPHATE-2-DEHYDROGENASE-RXN"],"synonyms":[{"name":"D-ribitol-5-phosphate:NAD(P)+ 2-oxidoreductase activity","type":"related"},{"name":"dehydrogenase, ribitol 5-phosphate","type":"related"}],"termid":"GO:0050256"}


id: PBO:0058875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10226","termid":"PBO:0058875"}


id: PBO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage complex subunit P (predicted)","termid":"PBO:0000184"}


id: PBO:0078061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 51 (pseudogene)","termid":"PBO:0078061"}


id: FYPO:0007855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitotic spindle assembly checkpoint signaling.","definition_xrefs":["PMID:12606573","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitotic spindle assembly checkpoint signaling","synonyms":[{"name":"increased duration of protein localisation to spindle during meiosis I","type":"exact"},{"name":"increased duration of protein localization to meiosis I spindle","type":"exact"},{"name":"increased duration of protein localization to meiotic spindle during meiosis I","type":"exact"},{"name":"increased duration of protein localization to spindle during first meiotic nuclear division","type":"exact"},{"name":"prolonged protein localization to spindle during meiosis I","type":"exact"}],"termid":"FYPO:0007855"}


id: FYPO:0000841
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115176],"is_not":false,"summary":null,"term":"FYPO:0000841"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium dodecyl sulfate (SDS). Cells stop growing (and may die) at a concentration of SDS that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":1,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sodium dodecyl sulfate","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266"],"single_locus_genotype_uniquenames":["atf1delta"],"synonyms":[{"name":"hypersensitive to sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to SDS","type":"exact"},{"name":"sensitive to sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to sodium dodecyl sulphate","type":"exact"}],"termid":"FYPO:0000841","terms_by_termid":{"FYPO:0000841":null,"FYPO_EXT:0000001":null}}


id: PBO:0062129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 9","termid":"PBO:0062129"}


id: FYPO:0007758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid cohesion lasts longer than normal, continuing into anaphase of mitosis.","definition_xrefs":["PMID:33888556","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"increased duration of mitotic sister chromatid cohesion","synonyms":[{"name":"ectopic cohesion protection during mitosis","type":"related"},{"name":"increased duration of mitotic chromosome cohesion","type":"exact"},{"name":"increased duration of mitotic sister chromatid cohesion during mitotic anaphase","type":"exact"},{"name":"increased duration of mitotic sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"increased duration of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"persistent mitotic sister chromatid cohesion during mitotic anaphase","type":"exact"},{"name":"prolonged mitotic sister chromatid cohesion","type":"exact"}],"termid":"FYPO:0007758"}


id: GO:0018983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving Z-phenylacetaldoxime, a member of the glucosinolate group of compounds, a class of natural products that are gaining increasing interest as cancer-preventing agents and crop protectants.","definition_xrefs":["UM-BBD_pathwayID:car"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldoxime metabolic process","termid":"GO:0019330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Z-phenylacetaldoxime metabolic process","secondary_identifiers":["UM-BBD_pathwayID:pao"],"synonyms":[{"name":"Z-phenylacetaldoxime metabolism","type":"exact"}],"termid":"GO:0018983"}


id: PBO:0056265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like transcriptional coactivator 1","termid":"PBO:0056265"}


id: GO:0046006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activated T cell proliferation","synonyms":[{"name":"regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"regulation of activated T-cell proliferation","type":"exact"},{"name":"regulation of activated T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046006"}


id: PBO:0059460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSC antisense RNA 1","termid":"PBO:0059460"}


id: PBO:0026714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_RNA_polymerase_II_promoter_during_vegetative_growth","termid":"PBO:0026714"}


id: PBO:0069853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1139, pseudogene","termid":"PBO:0069853"}


id: PBO:0055316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2744","termid":"PBO:0055316"}


id: PBO:0084984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-cytochrome P450 reductase; involved in ergosterol biosynthesis; associated and coordinately regulated with Erg11p","termid":"PBO:0084984"}


id: PBO:0004820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-C","termid":"PBO:0004820"}


id: GO:0008036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a diuretic hormone and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"diuretic hormone receptor activity","termid":"GO:0008036"}


id: GO:0032681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of lymphotoxin A production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"lymphotoxin A production","termid":"GO:0032641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of lymphotoxin A production","secondary_identifiers":["GO:0043016"],"synonyms":[{"name":"regulation of LTA production","type":"exact"},{"name":"regulation of TNF-beta production","type":"exact"},{"name":"regulation of lymphotoxin A biosynthetic process","type":"narrow"},{"name":"regulation of lymphotoxin-alpha production","type":"exact"},{"name":"regulation of tumor necrosis factor-beta production","type":"exact"}],"termid":"GO:0032681"}


id: PR:O60156
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-splicing endonuclease subunit Sen34 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03440","PRO:DNx","PANTHER:PTHR13070:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit sen34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.07c","secondary_identifiers":["UniProtKB:O60156"],"synonyms":[{"name":"Spom972h-TSEN34","type":"exact"},{"name":"tRNA-intron endonuclease sen34 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60156"}


id: GO:2000436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein neddylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"is_a","term_name":"regulation of protein neddylation","termid":"GO:2000434"},{"relation_name":"positively_regulates","term_name":"protein neddylation","termid":"GO:0045116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein neddylation","synonyms":[{"name":"positive regulation of RUB1-protein conjugation","type":"exact"}],"termid":"GO:2000436"}


id: PBO:0090667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit, membrane tether and lipid transfer protein Mmm1","termid":"PBO:0090667"}


id: GO:0035975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of carbamoyl phosphate, an intermediate in the urea cycle and other nitrogen compound metabolic pathways.","definition_xrefs":["UniPathway:UPA00996","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamoyl phosphate catabolic process (obsolete GO:0035975)","synonyms":[{"name":"carbamoyl phosphate breakdown","type":"exact"},{"name":"carbamoyl phosphate catabolism","type":"exact"},{"name":"carbamoyl phosphate degradation","type":"exact"}],"termid":"GO:0035975"}


id: PBO:0086191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to mammalian oxysterol-binding protein; contains ankyrin repeats and FFAT motif; interacts with ER anchor Scs2p at the nucleus-vacuole junction; regulated by sterol binding; SWH1 has a paralog, OSH2, that arose from the whole genome duplication","termid":"PBO:0086191"}


id: PBO:0074109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 1 (Augustine blood group)","termid":"PBO:0074109"}


id: GO:0019362
data:
  {"annotated_genes":["SJAG_04495","SJAG_02369","SJAG_01824","SJAG_00839","SJAG_02796","SJAG_00070","SJAG_02297","SJAG_06622","SJAG_03298","SJAG_03934","SJAG_03669","SJAG_00605","SJAG_00685","SJAG_03091","SJAG_03786","SJAG_00461","SJAG_04048","SJAG_00501","SJAG_04362","SJAG_03946","SJAG_01310","SJAG_02696","SJAG_03903","SJAG_03828","SJAG_03660","SJAG_04334","SJAG_02191","SJAG_02107","SJAG_04263","SJAG_00633","SJAG_04192","SJAG_04152","SJAG_06621","SJAG_02889","SJAG_05314","SJAG_00957","SJAG_01539","SJAG_04693","SJAG_02154","SJAG_02945","SJAG_00409","SJAG_03373","SJAG_01566","SJAG_02148","SJAG_02618","SJAG_02135","SJAG_02462","SJAG_00027","SJAG_01500","SJAG_02853","SJAG_01582","SJAG_02009","SJAG_03852","SJAG_01012","SJAG_01359","SJAG_04467"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105501,94399,105040,105041,100575,105037,105042,101922,105504,101923,105039,105505,99764,105036,101555,105507,99507,105038,101556,94129,112459,105506,90654,105503,91144,101557,105502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94316,107684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[109205,86800,87210,95462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[96181,113391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[101210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[93605,88044,92586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019674"},{"annotations":[85182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[101211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[90107,108966,92852,102602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"},{"annotations":[92587,88045,93606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[101212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[96983,98218,91239,95893,91238,98217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006740"},{"annotations":[75038,72047],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[85463,99556,113701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046496"},{"annotations":[85183,86801,105733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[104535,92494,109927,85105],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[114521,90659,93026,93116,107685,94317,111431],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0009051"},{"annotations":[85849],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[75041],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00070":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00501":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_01539":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_01824":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02297":null,"SJAG_02369":null,"SJAG_02462":null,"SJAG_02618":null,"SJAG_02696":null,"SJAG_02796":null,"SJAG_02853":null,"SJAG_02889":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03298":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03669":null,"SJAG_03786":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03934":null,"SJAG_03946":null,"SJAG_04048":null,"SJAG_04152":null,"SJAG_04192":null,"SJAG_04263":null,"SJAG_04334":null,"SJAG_04362":null,"SJAG_04467":null,"SJAG_04495":null,"SJAG_04693":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyridine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleotide metabolism","type":"exact"}],"termid":"GO:0019362","terms_by_termid":{"GO:0006096":null,"GO:0006116":null,"GO:0006734":null,"GO:0006740":null,"GO:0006741":null,"GO:0006742":null,"GO:0009051":null,"GO:0009052":null,"GO:0009435":null,"GO:0019358":null,"GO:0019674":null,"GO:0019677":null,"GO:0034355":null,"GO:0034356":null,"GO:0043456":null,"GO:0045820":null,"GO:0046496":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1905857":null}}


id: SO:1000008
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single nucleotide change which has occurred at the same position of a corresponding nucleotide in a reference sequence.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNV","termid":"SO:0001483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"point_mutation","secondary_identifiers":["http://en.wikipedia.org/wiki/Point_mutation"],"synonyms":[{"name":"point mutation","type":"exact"}],"termid":"SO:1000008"}


id: PBO:0027326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_surface_pyruvylated_galactose_level","termid":"PBO:0027326"}


id: PBO:0039295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG10 alpha-1,2-glucosyltransferase","termid":"PBO:0039295"}


id: PBO:0041976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 17","termid":"PBO:0041976"}


id: PBO:0070056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 13, pseudogene","termid":"PBO:0070056"}


id: PBO:0002636
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schneckenbecken dysplasia","termid":"PBO:0002636"}


id: PBO:0082484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cargo-transport protein involved in endocytosis; interacts with phosphatidylinositol-4-kinase Stt4p; is required, along with Efr3p, for the assembly and recruitment of multiple copies of the kinase into phosphoinositide kinase (PIK) patches at the plasma membrane; positively regulates Stt4p; GFP-fusion protein localizes to the cytoplasm; YGR198W is an essential gene","termid":"PBO:0082484"}


id: GO:0018263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an isopeptide cross-link between peptidyl-asparagine and peptidyl-cysteine to produce N-(L-isoaspartyl)-L-cysteine.","definition_xrefs":["RESID:AA0216"],"gene_count":0,"genotype_count":0,"name":"obsolete isopeptide cross-linking via N-(L-isoaspartyl)-L-cysteine (obsolete GO:0018263)","termid":"GO:0018263"}


id: GO:0005785
data:
  {"annotated_genes":["SJAG_00360","SJAG_01558"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90407,105864],"is_not":false,"summary":null,"term":"GO:0005785"}]},"cv_name":"cellular_component","definition":"A transmembrane heterodimeric protein located in the membrane of the rough endoplasmic reticulum. Both subunits contain GTPase domains with which signal recognition particle interacts. In the presence of GTP and SRP receptor, SRP is released from the ribosome-nascent chain complex.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00360":null,"SJAG_01558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005789","GO:0005783"],"is_obsolete":false,"name":"signal recognition particle receptor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SR complex","type":"exact"},{"name":"docking protein complex","type":"related"}],"termid":"GO:0005785","terms_by_termid":{"GO:0005785":null}}


id: PBO:0072588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 12 homolog","termid":"PBO:0072588"}


id: SO:0001747
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence that in the normal state of the chromosome corresponds to an unfolded, un-complexed stretch of double-stranded DNA.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"open_chromatin_region","synonyms":[{"name":"open chromatin region","type":"exact"}],"termid":"SO:0001747"}


id: PR:O94374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imp1 gene.","definition_xrefs":["UniProtKB:O94374","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit alpha-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.08c","synonyms":[{"name":"Spom972h-imp1","type":"exact"},{"name":"importin-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit alpha-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94374"}


id: GO:0061580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a colonic epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal epithelial cell migration","termid":"GO:0061582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colon epithelial cell migration","termid":"GO:0061580"}


id: MOD:01279
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:11283024","PubMed:1443554","Unimod:253#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crotonaldehyde","termid":"MOD:00576"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crotonaldehyde - site H","synonyms":[{"name":"Crotonaldehyde","type":"related"}],"termid":"MOD:01279"}


id: GO:0034930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-hydroxypyrene + XSO3- = 1-pyrenylsulfate + HX.","definition_xrefs":["UM-BBD_reactionID:r0952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"1-hydroxypyrene sulfotransferase activity","termid":"GO:0034930"}


id: PBO:0047329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas binding factor 1","termid":"PBO:0047329"}


id: FYPO:0007922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cysteine  above normal physiological concentrations. Cells stop growing (and may die) at a concentration of cysteine that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to cysteine","synonyms":[{"name":"sensitive to cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0007922"}


id: PBO:0035886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule-based_movement","termid":"PBO:0035886"}


id: PBO:0058668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6796","termid":"PBO:0058668"}


id: GO:0072464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of meiotic spindle assembly checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to meiotic cell cycle checkpoint signaling","termid":"GO:0072410"},{"relation_name":"is_a","term_name":"response to spindle assembly checkpoint signaling","termid":"GO:0072485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to meiotic spindle assembly checkpoint signaling","synonyms":[{"name":"meiotic spindle assembly checkpoint effector process","type":"exact"},{"name":"response to signal involved in meiotic spindle assembly checkpoint","type":"exact"}],"termid":"GO:0072464"}


id: PBO:0073101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 5","termid":"PBO:0073101"}


id: PBO:0071287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 10","termid":"PBO:0071287"}


id: PBO:0069074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 321, pseudogene","termid":"PBO:0069074"}


id: PBO:0080171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 6","termid":"PBO:0080171"}


id: PBO:0082667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Ctf19 complex and the COMA subcomplex; involved in kinetochore-microtubule mediated chromosome segregation; binds to centromere DNA; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-H and fission yeast fta3","termid":"PBO:0082667"}


id: PBO:0017459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hyperparasite_of","termid":"PBO:0017459"}


id: GO:1905888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to very-low-density lipoprotein particle stimulus.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:7592957","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to very-low-density lipoprotein particle stimulus","termid":"GO:1905890"},{"relation_name":"negatively_regulates","term_name":"cellular response to very-low-density lipoprotein particle stimulus","termid":"GO:0090731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to very-low-density lipoprotein particle stimulus","synonyms":[{"name":"down regulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"down regulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"down-regulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"down-regulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"downregulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"downregulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"inhibition of cellular response to VLDL particle stimulus","type":"narrow"},{"name":"inhibition of cellular response to very-low-density lipoprotein particle stimulus","type":"narrow"},{"name":"negative regulation of cellular response to VLDL particle stimulus","type":"exact"}],"termid":"GO:1905888"}


id: GO:0034993
data:
  {"annotated_genes":["SJAG_04558","SJAG_01538","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92844,98927,108947],"is_not":false,"summary":null,"term":"GO:0034993"},{"annotations":[92847,98935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A nuclear membrane protein complex which connects the nuclear outer and inner membranes together, and links links the nuclear lumen to cytoplasmic microtubules during meiosis.","definition_xrefs":["GOC:mah","PMID:18692466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane microtubule tethering complex","termid":"GO:0106094"},{"relation_name":"part_of","term_name":"microtubule organizing center attachment site","termid":"GO:0034992"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"meiotic nuclear membrane microtubule tethering complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"LINC complex","type":"exact"},{"name":"LInker of Nucleoskeleton and Cytoskeleton complex","type":"exact"},{"name":"SUN-KASH complex","type":"exact"}],"termid":"GO:0034993","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: PBO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expressed with adjacent tandem gene","termid":"PBO:0002024"}


id: PBO:0085241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; plays a role in determining prion variants; binds to Hsp82p and contributes to chaperone activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0085241"}


id: PBO:0050091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1","termid":"PBO:0050091"}


id: PBO:0073171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase","termid":"PBO:0073171"}


id: PBO:0059233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L3 pseudogene 1","termid":"PBO:0059233"}


id: GO:2000256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of male germ cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of germ cell proliferation","termid":"GO:1905938"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"is_a","term_name":"regulation of male germ cell proliferation","termid":"GO:2000254"},{"relation_name":"positively_regulates","term_name":"male germ cell proliferation","termid":"GO:0002176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of male germ cell proliferation","termid":"GO:2000256"}


id: GO:0018734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butyrolactone + H2O = 4-hydroxybutanoate.","definition_xrefs":["UM-BBD_reactionID:r0016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"butyrolactone hydrolase activity","termid":"GO:0018734"}


id: PBO:0029927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_GMP_binding","termid":"PBO:0029927"}


id: FYPO:0000023
data:
  {"alleles_by_uniquename":{"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115416,115420,115417,115179],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0000648"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has an abnormally low volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02013":null,"SJAG_03048":null,"SJAG_04280":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"small cell","references_by_uniquename":{"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_03048","SJAG_04280","SJAG_02013"],"single_locus_genotype_uniquenames":["cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","pyp1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell size: decreased","type":"related"},{"name":"decreased cell size","type":"exact"},{"name":"reduced cell size","type":"exact"}],"termid":"FYPO:0000023","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0110147
data:
  {"annotated_genes":["SJAG_05338","SJAG_04679","SJAG_04896"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91553,92953,115058],"is_not":false,"summary":null,"term":"GO:0110147"}]},"cv_name":"biological_process","definition":"A process that contributes to the delivery of nickel ions to a target protein to facilitate its maturation.","definition_xrefs":["GOC:al","PMID:24115911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"protein maturation by nickel ion transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110147","terms_by_termid":{"GO:0110147":null}}


id: GO:0070247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of natural killer cell death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte apoptotic process","termid":"GO:0070228"},{"relation_name":"regulates","term_name":"natural killer cell apoptotic process","termid":"GO:0070246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell apoptotic process","synonyms":[{"name":"regulation of NK cell apoptosis","type":"exact"},{"name":"regulation of natural killer cell apoptosis","type":"narrow"}],"termid":"GO:0070247"}


id: GO:0016606
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body that is enriched in the lymphoid cell-specific protein LYSp100B; LANDs are globular, electron-dense structures and are morphologically distinct from the annular structures characteristic of PML bodies.","definition_xrefs":["PMID:8695863","PMID:10921892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"LYSP100-associated nuclear domain","synonyms":[{"name":"LANDs","type":"exact"}],"termid":"GO:0016606"}


id: PBO:0109114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 8, tRNA N3-cytidine","termid":"PBO:0109114"}


id: GO:1903613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein tyrosine phosphatase activity.","definition_xrefs":["PMID:11129957","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphoprotein phosphatase activity","termid":"GO:0043666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein tyrosine phosphatase activity","synonyms":[{"name":"regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"regulation of PPT-phosphatase activity","type":"exact"},{"name":"regulation of PTP-phosphatase activity","type":"exact"},{"name":"regulation of PTPase activity","type":"exact"},{"name":"regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"regulation of tyrosylprotein phosphatase activity","type":"exact"}],"termid":"GO:1903613"}


id: GO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of norepinephrine released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by norepinephrine","termid":"GO:0003116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by neuronal norepinephrine","synonyms":[{"name":"regulation of vasoconstriction by neuronal noradrenaline","type":"exact"}],"termid":"GO:0003118"}


id: GO:0008758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + UDP-2,3-bis(3-hydroxymyristoyl)glucosamine = 2,3-bis(3-hydroxymyristoyl)-beta-D-glucosaminyl 1-phosphate + UMP.","definition_xrefs":["PMID:12000770","MetaCyc:LIPIDXSYNTHESIS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"UDP-2,3-diacylglucosamine hydrolase activity","secondary_identifiers":["RHEA:25213"],"termid":"GO:0008758"}


id: PBO:0079073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-1","termid":"PBO:0079073"}


id: SO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A protein coding transcript that contains a CDS but has one or more splice junctions >50bp downstream of stop codon, making it susceptible to nonsense mediated decay.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding_primary_transcript","termid":"SO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD_transcript","secondary_identifiers":["http://www.gencodegenes.org/gencode_biotypes.html"],"synonyms":[{"name":"NMD transcript","type":"exact"},{"name":"nonsense mediated decay transcript","type":"exact"},{"name":"protein_coding_NMD","type":"exact"}],"termid":"SO:0002114"}


id: GO:0008690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + 3-deoxy-D-manno-octulosonate = diphosphate + CMP-3-deoxy-D-manno-octulosonate.","definition_xrefs":["EC:2.7.7.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-deoxy-manno-octulosonate cytidylyltransferase activity","secondary_identifiers":["MetaCyc:CPM-KDOSYNTH-RXN","RHEA:23448"],"synonyms":[{"name":"2-keto-3-deoxyoctonate cytidylyltransferase activity","type":"related"},{"name":"3-deoxy-D-manno-octulosonate cytidylyltransferase activity","type":"related"},{"name":"CMP-2-keto-3-deoxyoctulosonic acid synthetase activity","type":"related"},{"name":"CMP-3-deoxy-D-manno-octulosonate diphosphorylase activity","type":"related"},{"name":"CMP-3-deoxy-D-manno-octulosonate pyrophosphorylase activity","type":"related"},{"name":"CMP-3-deoxy-D-manno-octulosonate synthetase activity","type":"related"},{"name":"CMP-KDO synthetase activity","type":"related"},{"name":"CTP:3-deoxy-D-manno-octulosonate cytidylyltransferase activity","type":"related"},{"name":"CTP:3-deoxy-manno-octulosonate cytidylyltransferase activity","type":"exact"},{"name":"CTP:CMP-3-deoxy-D-manno-octulosonate cytidylyltransferase activity","type":"related"},{"name":"cytidine monophospho-3-deoxy-D-manno-octulosonate pyrophosphorylase activity","type":"related"}],"termid":"GO:0008690"}


id: FYPO:0000627
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115678,115677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[115645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[115211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[115374,115377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000579"},{"annotations":[115376,115373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"},{"annotations":[115668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype","termid":"FYPO:0000114"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01143":null,"SJAG_01355":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null,"SJAG_04883":null},"genotype_count":7,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta 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leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild 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process","references_by_uniquename":{"PMID:25866389":null,"PMID:35226668":null,"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04883","SJAG_00601","SJAG_01143","SJAG_01355","SJAG_03689"],"single_locus_genotype_uniquenames":["ptp4delta","dcr1delta","cox6delta","rip1delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"termid":"FYPO:0000627","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000579":null,"FYPO:0000590":null,"FYPO:0000596":null,"FYPO:0000644":null,"FYPO:0001007":null,"FYPO:0006989":null,"FYPO_EXT:0000001":null}}


id: GO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a transcription ternary complex, composed of RNA polymerase, template DNA, and an RNA transcript, into its constituent components.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex disassembly","termid":"GO:0001117"},{"relation_name":"part_of","term_name":"DNA-templated transcription termination","termid":"GO:0006353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transcription ternary complex disassembly","synonyms":[{"name":"transcription protein-DNA-RNA complex disassembly","type":"exact"}],"termid":"GO:0001118"}


id: PBO:0068735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 6, pseudogene","termid":"PBO:0068735"}


id: PBO:0058565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6507","termid":"PBO:0058565"}


id: PBO:0004724
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.9","termid":"PBO:0004724"}


id: PBO:0058495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR5689 host gene","termid":"PBO:0058495"}


id: GO:0099012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a neuronal dense core vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule membrane","termid":"GO:0032127"},{"relation_name":"part_of","term_name":"neuronal dense core vesicle","termid":"GO:0098992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"neuronal dense core vesicle membrane","termid":"GO:0099012"}


id: GO:1903419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cortical endoplasmic reticulum.","definition_xrefs":["PMID:25103238","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to endoplasmic reticulum tubular network","termid":"GO:1903420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cortical endoplasmic reticulum","synonyms":[{"name":"protein localisation in cortical endoplasmic reticulum","type":"exact"},{"name":"protein localisation to cortical endoplasmic reticulum","type":"exact"},{"name":"protein localization in cortical endoplasmic reticulum","type":"exact"},{"name":"protein localization to cortical ER","type":"exact"}],"termid":"GO:1903419"}


id: GO:0061503
data:
  {"annotated_genes":["SJAG_02084"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88036],"is_not":false,"summary":null,"term":"GO:0061503"}]},"cv_name":"molecular_function","definition":"Catalysis of the ATP-dependent dehydration of t6A to form cyclic t6A.","definition_xrefs":["PMID:23242255","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02084":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0140101","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061503","terms_by_termid":{"GO:0061503":null}}


id: GO:0006926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any apoptotic process in a cell infected with a virus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete virus-infected cell apoptotic process (obsolete GO:0006926)","synonyms":[{"name":"apoptosis of virus-infected cells","type":"exact"},{"name":"killing virus-infected cells","type":"exact"},{"name":"programmed cell death of virus-infected cells by apoptosis","type":"exact"},{"name":"programmed cell death, virus-infected cells","type":"exact"},{"name":"virus-infected cell apoptosis","type":"narrow"},{"name":"virus-infected cell apoptotic process","type":"exact"},{"name":"virus-infected cell programmed cell death by apoptosis","type":"exact"}],"termid":"GO:0006926"}


id: PBO:0045676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 2 heavy chain 1","termid":"PBO:0045676"}


id: PBO:0045842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 32","termid":"PBO:0045842"}


id: PBO:0081589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF516 antisense RNA 1","termid":"PBO:0081589"}


id: GO:0010543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"regulates","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of platelet activation","termid":"GO:0010543"}


id: GO:1905551
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id: GO:1904982
data:
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id: PBO:0044288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 51B","termid":"PBO:0044288"}


id: PBO:0031826
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_modification","termid":"PBO:0031826"}


id: GO:0070535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A histone ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is added to a lysine residue in histone H2A or the variant H2AX.","definition_xrefs":["GOC:mah","PMID:18430235"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A K63-linked ubiquitination (obsolete GO:0070535)","termid":"GO:0070535"}


id: PBO:0066926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 228","termid":"PBO:0066926"}


id: MOD:00987
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tyrosine residue with a chlorine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated residue","termid":"MOD:00753"},{"relation_name":"is_a","term_name":"halogenated tyrosine","termid":"MOD:00985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlorinated tyrosine","synonyms":[{"name":"ClTyr","type":"exact"}],"termid":"MOD:00987"}


id: PBO:0028890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_swollen_elongated_germ_tube","termid":"PBO:0028890"}


id: GO:1901848
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinate.","definition_xrefs":["UniPathway:UPA00830","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"},{"relation_name":"is_a","term_name":"nicotinate metabolic process","termid":"GO:1901847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinate catabolic process","synonyms":[{"name":"nicotinate breakdown","type":"exact"},{"name":"nicotinate catabolism","type":"exact"},{"name":"nicotinate degradation","type":"exact"}],"termid":"GO:1901848"}


id: PBO:0034676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_frequency_of_meiotic_crossover_associated_with_gene_conversion","termid":"PBO:0034676"}


id: GO:0006260
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id: PBO:0047462
data:
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id: GO:0103003
data:
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id: PBO:0058852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8081","termid":"PBO:0058852"}


id: PBO:0070841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 20","termid":"PBO:0070841"}


id: PBO:0040444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8B5, pseudogene","termid":"PBO:0040444"}


id: GO:0098686
data:
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id: GO:0008275
data:
  {"annotated_genes":["SJAG_01215","SJAG_03835","SJAG_07018","SJAG_02609"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97096,104948,105714,106687],"is_not":false,"summary":null,"term":"GO:0008275"}]},"cv_name":"cellular_component","definition":"A complex usually comprising two gamma-tubulin molecules and two conserved non-tubulin proteins. Some gamma-tubulin small complexes are thought to be the repeating unit making up the core of the gamma-tubulin ring complex.","definition_xrefs":["PMID:11297925","PMID:12134075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex","termid":"GO:0000930"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"gamma-tubulin small complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000928","GO:0000927","GO:0061495"],"synonyms":[{"name":"Tub4 complex","type":"narrow"},{"name":"gamma-tubulin small complex, centrosomal","type":"narrow"},{"name":"gamma-tubulin small complex, mitotic spindle pole body","type":"narrow"},{"name":"gamma-tubulin small complex, spindle pole body","type":"narrow"},{"name":"gammaTuSC","type":"exact"}],"termid":"GO:0008275","terms_by_termid":{"GO:0008275":null}}


id: GO:1903946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ventricular cardiac muscle cell action potential.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","GOC:nc","GOC:TermGenie","PMID:25281747","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"regulation of ventricular cardiac muscle cell action potential","termid":"GO:0098911"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle cell contraction","termid":"GO:0106135"},{"relation_name":"negatively_regulates","term_name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ventricular cardiac muscle cell action potential","synonyms":[{"name":"down regulation of ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of ventricular cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of ventricular cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:1903946"}


id: FYPO:0000061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"multinucleate","termid":"FYPO:0003341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"multinucleate vegetative cell","synonyms":[{"name":"multinucleate cells during vegetative growth","type":"exact"},{"name":"multinucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"multiple nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0000061"}


id: PBO:0018152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control Swt1 (predicted)","termid":"PBO:0018152"}


id: GO:1905414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion-dependent exocytosis","termid":"GO:0045955"},{"relation_name":"is_a","term_name":"regulation of dense core granule exocytosis","termid":"GO:1905413"},{"relation_name":"negatively_regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dense core granule exocytosis","synonyms":[{"name":"down regulation of dense core granule exocytosis","type":"exact"},{"name":"down regulation of dense core vesicle exocytosis","type":"exact"},{"name":"down-regulation of dense core granule exocytosis","type":"exact"},{"name":"down-regulation of dense core vesicle exocytosis","type":"exact"},{"name":"downregulation of dense core granule exocytosis","type":"exact"},{"name":"downregulation of dense core vesicle exocytosis","type":"exact"},{"name":"inhibition of dense core granule exocytosis","type":"narrow"},{"name":"inhibition of dense core vesicle exocytosis","type":"narrow"},{"name":"negative regulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905414"}


id: GO:0048848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the neurohypophysis are generated and organized. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"neurohypophysis development","termid":"GO:0021985"},{"relation_name":"part_of","term_name":"hypophysis morphogenesis","termid":"GO:0048850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurohypophysis morphogenesis","synonyms":[{"name":"neurophysis morphogenesis","type":"exact"},{"name":"posterior pituitary gland morphogenesis","type":"exact"},{"name":"posterior pituitary morphogenesis","type":"exact"}],"termid":"GO:0048848"}


id: PBO:0043558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type V alpha 1 chain","termid":"PBO:0043558"}


id: PBO:0069809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1095, pseudogene","termid":"PBO:0069809"}


id: PBO:0004010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin ortholog Bhd1","termid":"PBO:0004010"}


id: PBO:0047139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 174 member B","termid":"PBO:0047139"}


id: PBO:0055377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2806","termid":"PBO:0055377"}


id: PBO:0029577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation_at_Thr-Pro_site","termid":"PBO:0029577"}


id: PBO:0062942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4","termid":"PBO:0062942"}


id: PBO:0048581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 5","termid":"PBO:0048581"}


id: GO:0052350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates induced systemic resistance in the symbiont; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of induced systemic resistance in symbiont (obsolete GO:0052350)","synonyms":[{"name":"activation by organism of ISR in symbiont","type":"exact"},{"name":"activation by organism of induced systemic resistance in symbiont","type":"exact"},{"name":"induction by organism of ISR in symbiont","type":"exact"},{"name":"induction by organism of induced systemic resistance in symbiont","type":"exact"}],"termid":"GO:0052350"}


id: PBO:0055951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 59","termid":"PBO:0055951"}


id: PBO:0079728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 5 (pseudogene)","termid":"PBO:0079728"}


id: GO:0004540
data:
  {"annotated_genes":["SJAG_00955","SJAG_01836","SJAG_01463","SJAG_00772","SJAG_00400","SJAG_03328","SJAG_00997","SJAG_02547","SJAG_03132","SJAG_04587","SJAG_02553","SJAG_01551","SJAG_01260","SJAG_02540","SJAG_04019","SJAG_04527","SJAG_01798","SJAG_04824","SJAG_00253","SJAG_01948","SJAG_04407","SJAG_06613","SJAG_04907","SJAG_02621","SJAG_06022","SJAG_04153","SJAG_05214","SJAG_03952","SJAG_03539","SJAG_01431","SJAG_00306","SJAG_03962","SJAG_01433","SJAG_02374","SJAG_01884","SJAG_02156","SJAG_02993","SJAG_00754","SJAG_04084","SJAG_04435","SJAG_03745","SJAG_00966","SJAG_04916","SJAG_00401","SJAG_02275","SJAG_01623","SJAG_06586","SJAG_02790","SJAG_03689","SJAG_03876","SJAG_04885","SJAG_03276","SJAG_04519","SJAG_02039","SJAG_04091","SJAG_04006","SJAG_00841","SJAG_03796","SJAG_04582","SJAG_00081","SJAG_03425","SJAG_03234","SJAG_01822","SJAG_16455","SJAG_04198","SJAG_04369","SJAG_04818","SJAG_01476"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86469,86538,92198,103575,111763,111806],"is_not":false,"summary":null,"term":"GO:0004540"},{"annotations":[104599,91761,95064,86134,107359,103895,112713,103571,98206,99797,114380,88379,101366,111757,100520,99060,111427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[106012,88280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042781"},{"annotations":[86466,91091,86773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[87823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140432"},{"annotations":[98295,104601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032296"},{"annotations":[114172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070551"},{"annotations":[110537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[87826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990174"},{"annotations":[103896,111762,112714,109031,89531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[89854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"},{"annotations":[112099,98297,99563,72500,105955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004525"},{"annotations":[114669,90840,101763,109603,100879,111410,92632,95612,92923,100660,111494,101764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000171"},{"annotations":[109604,100661,100880,92924,98175,90841,111411,95613,114670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[85198,91964,85677,84523,86537,86775,105117,109032,112439,103573,114149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004521"},{"annotations":[88339,114174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016891"},{"annotations":[88380,95740,103574,97156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004532"},{"annotations":[86384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008419"},{"annotations":[94258,105240,84480,99066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004523"},{"annotations":[113765,102027,96919,97455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":68,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00253":null,"SJAG_00306":null,"SJAG_00400":null,"SJAG_00401":null,"SJAG_00754":null,"SJAG_00772":null,"SJAG_00841":null,"SJAG_00955":null,"SJAG_00966":null,"SJAG_00997":null,"SJAG_01260":null,"SJAG_01431":null,"SJAG_01433":null,"SJAG_01463":null,"SJAG_01476":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_01884":null,"SJAG_01948":null,"SJAG_02039":null,"SJAG_02156":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02540":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02621":null,"SJAG_02790":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03234":null,"SJAG_03276":null,"SJAG_03328":null,"SJAG_03425":null,"SJAG_03539":null,"SJAG_03689":null,"SJAG_03745":null,"SJAG_03796":null,"SJAG_03876":null,"SJAG_03952":null,"SJAG_03962":null,"SJAG_04006":null,"SJAG_04019":null,"SJAG_04084":null,"SJAG_04091":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04435":null,"SJAG_04519":null,"SJAG_04527":null,"SJAG_04582":null,"SJAG_04587":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04885":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_05214":null,"SJAG_06022":null,"SJAG_06586":null,"SJAG_06613":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"RNA nuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribonuclease activity","type":"exact"}],"termid":"GO:0004540","terms_by_termid":{"GO:0000171":null,"GO:0000175":null,"GO:0000213":null,"GO:0004521":null,"GO:0004523":null,"GO:0004525":null,"GO:0004526":null,"GO:0004532":null,"GO:0004534":null,"GO:0004535":null,"GO:0004540":null,"GO:0008419":null,"GO:0008859":null,"GO:0016891":null,"GO:0032296":null,"GO:0042781":null,"GO:0070551":null,"GO:0140432":null,"GO:1990174":null,"GO:1990838":null}}


id: PBO:0061989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 11","termid":"PBO:0061989"}


id: PBO:0030289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_glycerol_carbon_source","termid":"PBO:0030289"}


id: PBO:0039198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde reductase family 1 member B1 pseudogene 1","termid":"PBO:0039198"}


id: SO:0000920
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a cytidine.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000920 insert_C (obsolete SO:0000920)","synonyms":[{"name":"insert C","type":"exact"}],"termid":"SO:0000920"}


id: PBO:0063431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 5","termid":"PBO:0063431"}


id: SO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-protein_coding gene that encodes a guide_RNA.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gRNA_encoding","synonyms":[{"name":"gRNA encoding","type":"exact"}],"termid":"SO:0000979"}


id: PBO:0017994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-site clamp monopolin complex subunit Mde4","termid":"PBO:0017994"}


id: FYPO:0002615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to pre-autophagosomal structure","synonyms":[{"name":"decreased protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"decreased protein localization to PAS","type":"exact"},{"name":"decreased protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"},{"name":"reduced protein localization to pre-autophagosomal structure","type":"exact"}],"termid":"FYPO:0002615"}


id: GO:0010766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transport","termid":"GO:0002028"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"negatively_regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of sodium ion transport","termid":"GO:0010766"}


id: PBO:0077792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase","termid":"PBO:0077792"}


id: GO:0008790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose = D-ribulose.","definition_xrefs":["EC:5.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"arabinose isomerase activity","secondary_identifiers":["MetaCyc:DARABISOM-RXN","RHEA:13849"],"synonyms":[{"name":"D-arabinose aldose-ketose-isomerase activity","type":"related"},{"name":"D-arabinose isomerase activity","type":"narrow"},{"name":"D-arabinose ketol-isomerase activity","type":"related"},{"name":"D-arabinose(L-fucose) isomerase activity","type":"related"}],"termid":"GO:0008790"}


id: GO:0071253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a connexin, any of a group of related proteins that assemble to form gap junctions.","definition_xrefs":["GOC:mah","PMID:19864490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"connexin binding","termid":"GO:0071253"}


id: GO:0006794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary phosphorus source and then activates genes to scavenge the last traces of the primary phosphorus source and to transport and metabolize alternative phosphorus sources. The utilization process begins when the cell or organism detects phosphorus levels, includes the phosphorus-containing substances, and ends when phosphorus is incorporated into the cell or organism's metabolism.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphorus utilization","termid":"GO:0006794"}


id: GO:0000723
data:
  {"annotated_genes":["SJAG_05373","SJAG_04266","SJAG_04150","SJAG_00559","SJAG_03843","SJAG_03780","SJAG_02563","SJAG_05353","SJAG_01378","SJAG_02079","SJAG_02116","SJAG_04863","SJAG_00640","SJAG_06597","SJAG_05979","SJAG_00429","SJAG_06642","SJAG_01832","SJAG_04586","SJAG_01410","SJAG_05173","SJAG_00939","SJAG_01263","SJAG_03720","SJAG_01864","SJAG_03092","SJAG_05372","SJAG_03685","SJAG_00364","SJAG_01068","SJAG_01777","SJAG_01605","SJAG_02362","SJAG_03624","SJAG_05105","SJAG_03026","SJAG_01377","SJAG_03722","SJAG_02194","SJAG_02212","SJAG_04245","SJAG_02771","SJAG_03855","SJAG_01677","SJAG_04183","SJAG_04372"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84722,85282,85330,85925,87563,87962,88651,91221,92312,95190,95313,95837,95845,96975,100276,101204,102054,102242,102728,103869,104042,104144,105491,105669,106480,107054,107638,107660,107840,107841,108633,108938,110393,112050,112346,112365,112954],"is_not":false,"summary":null,"term":"GO:0000723"},{"annotations":[93326],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032215"},{"annotations":[85923,101202],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031848"},{"annotations":[91219],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[110714,106479,85924,101203,95836,91220,112049,87961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016233"},{"annotations":[88845,88846,109053,92313,107842,88847,88848,109054,109056,85331,109057,109055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"},{"annotations":[86787,104043,104228,112051,85332,86788,107661,109941,95838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"},{"annotations":[101205,102243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010833"}]},"cv_name":"biological_process","definition":"Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins, the length of telomeric DNA and the replication and repair of the DNA. These processes includes those that shorten, lengthen, replicate and repair the telomeric DNA sequences.","definition_xrefs":["GOC:rl","GOC:elh","PMID:11092831","GOC:BHF","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"telomere organization","termid":"GO:0032200"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00559":null,"SJAG_00640":null,"SJAG_00939":null,"SJAG_01068":null,"SJAG_01263":null,"SJAG_01377":null,"SJAG_01378":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01777":null,"SJAG_01832":null,"SJAG_01864":null,"SJAG_02079":null,"SJAG_02116":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02362":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03092":null,"SJAG_03624":null,"SJAG_03685":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03855":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04245":null,"SJAG_04266":null,"SJAG_04372":null,"SJAG_04586":null,"SJAG_04863":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_05979":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"telomere maintenance","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of telomere length","type":"related"}],"termid":"GO:0000723","terms_by_termid":{"GO:0000722":null,"GO:0000723":null,"GO:0007004":null,"GO:0010833":null,"GO:0016233":null,"GO:0031848":null,"GO:0032210":null,"GO:0032215":null}}


id: PBO:0043703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6A1","termid":"PBO:0043703"}


id: PBO:0057945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-1","termid":"PBO:0057945"}


id: PBO:0079297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"titin","termid":"PBO:0079297"}


id: PBO:0070298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 4","termid":"PBO:0070298"}


id: PBO:0074094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 9","termid":"PBO:0074094"}


id: PBO:0027837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton","termid":"PBO:0027837"}


id: GO:0033321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving homomethionine, a non-protein amino acid synthesized from methionine via chain elongation.","definition_xrefs":["MetaCyc:PWY-1186","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"homomethionine metabolic process","synonyms":[{"name":"homomethionine metabolism","type":"exact"}],"termid":"GO:0033321"}


id: GO:0060380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of binding to single-stranded telomeric DNA.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomeric DNA binding","termid":"GO:1904742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of single-stranded telomeric DNA binding","synonyms":[{"name":"regulation of telomeric ssDNA binding","type":"exact"}],"termid":"GO:0060380"}


id: PBO:0086580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant has no detectable phenotype","termid":"PBO:0086580"}


id: PBO:0025458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase with bromodomain protein","termid":"PBO:0025458"}


id: PBO:0041577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 open reading frame 91","termid":"PBO:0041577"}


id: GO:0010073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the identity, size and shape of a meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meristem maintenance","termid":"GO:0010073"}


id: PBO:0069907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1198, pseudogene","termid":"PBO:0069907"}


id: PBO:0065765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide YY 2 (pseudogene)","termid":"PBO:0065765"}


id: GO:0000105
data:
  {"annotated_genes":["SJAG_04747","SJAG_03775","SJAG_01137","SJAG_01346","SJAG_00592","SJAG_03055","SJAG_00248","SJAG_02400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90879,93174,98425,100940,103041,103970,106522,111120],"is_not":false,"summary":null,"term":"GO:0000105"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine metabolic process","termid":"GO:0006547"},{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00248":null,"SJAG_00592":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_02400":null,"SJAG_03055":null,"SJAG_03775":null,"SJAG_04747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-histidine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HISTSYN-PWY"],"synonyms":[{"name":"histidine anabolism","type":"exact"},{"name":"histidine biosynthesis","type":"exact"},{"name":"histidine biosynthetic process","type":"broad"},{"name":"histidine formation","type":"exact"},{"name":"histidine synthesis","type":"exact"}],"termid":"GO:0000105","terms_by_termid":{"GO:0000105":null}}


id: PBO:0056264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAM domain containing 4","termid":"PBO:0056264"}


id: PBO:0090778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-O ortholog Mal2","termid":"PBO:0090778"}


id: GO:0042022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-12 and that consists of, at a minimum, a dimeric interleukin and its two receptor subunits as well as optional additional kinase subunits.","definition_xrefs":["GOC:ebc","GOC:mah","PMID:10971505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"interleukin-12 receptor complex","synonyms":[{"name":"IL-12 receptor complex","type":"exact"},{"name":"IL12RB1-IL12RB2 complex","type":"narrow"}],"termid":"GO:0042022"}


id: PR:Q9USS4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC557.02c gene.","definition_xrefs":["UniProtKB:Q9USS4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C557.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC557.02c","synonyms":[{"name":"Spom972h-SPBC557.02c","type":"exact"}],"termid":"PR:Q9USS4"}


id: PBO:0027774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_viridicatumtoxin","termid":"PBO:0027774"}


id: PBO:0110982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein implicated in signalling; DUF4196 and DUF4211, human CCDC82 ortholog","termid":"PBO:0110982"}


id: PBO:0074281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slit guidance ligand 2","termid":"PBO:0074281"}


id: GO:0106128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["PMID:23447642","GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport","termid":"GO:0051926"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium entry","termid":"GO:2001256"},{"relation_name":"negatively_regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of store-operated calcium entry","termid":"GO:0106128"}


id: GO:0160096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nematode pharyngeal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ development","termid":"GO:0007517"},{"relation_name":"part_of","term_name":"nematode pharynx development","termid":"GO:0160094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharyngeal muscle development","termid":"GO:0160096"}


id: PBO:0090271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L6","termid":"PBO:0090271"}


id: PBO:0074144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B4","termid":"PBO:0074144"}


id: PBO:0079465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23C pseudogene 1","termid":"PBO:0079465"}


id: PBO:0004950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp109","termid":"PBO:0004950"}


id: GO:0046447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving terpenoid indole alkaloids, compounds formed from the condensation of tryptamine (derived from tryptophan) and secologanin (derived from geranyl pyrophosphate).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid metabolic process","termid":"GO:0035834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terpenoid indole alkaloid metabolic process","synonyms":[{"name":"terpenoid indole alkaloid metabolism","type":"exact"}],"termid":"GO:0046447"}


id: PBO:0003051
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains CCAAT element","termid":"PBO:0003051"}


id: PBO:0069281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 537, pseudogene","termid":"PBO:0069281"}


id: PBO:0066233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 41","termid":"PBO:0066233"}


id: GO:0018194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-alanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-alanine modification","termid":"GO:0018194"}


id: GO:0106345
data:
  {"annotated_genes":["SJAG_00281","SJAG_01432"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101186,97146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030267"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glycolate + NAD(P)+ = glyoxylate + NAD(P)H.","definition_xrefs":["GOC:curators","PMID:3548703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glyoxylate reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106345","terms_by_termid":{"GO:0030267":null}}


id: PBO:0087697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing; ORC4 has a paralog, RIF2, that arose from the whole genome duplication","termid":"PBO:0087697"}


id: RO:0002478
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A child nucleus relationship in which the cells are part of a male organism","direct_ancestors":[{"relation_name":"is_a","term_name":"child_nucleus_of","termid":"RO:0002476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"child_nucleus_of_in_male","termid":"RO:0002478"}


id: FYPO:0006214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of spore germination is decreased when germination takes place under conditions of copper ion starvation.","definition_xrefs":["PMID:28572514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased spore germination frequency","termid":"FYPO:0000581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased spore germination frequency during copper ion starvation","synonyms":[{"name":"decreased spore germination during copper ion starvation","type":"exact"},{"name":"decreased spore germination frequency during cellular response to copper ion starvation","type":"exact"},{"name":"decreased spore germination frequency during copper starvation","type":"exact"},{"name":"decreased spore viability during copper ion starvation","type":"related"},{"name":"reduced spore germination frequency during copper ion starvation","type":"exact"},{"name":"reduced spore viability during copper ion starvation","type":"related"}],"termid":"FYPO:0006214"}


id: GO:0034676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha6 subunit and one beta4 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"integrin alpha6-beta4 complex","synonyms":[{"name":"ITGA6-ITGB4 complex","type":"narrow"},{"name":"alpha6-beta4 integrin complex","type":"exact"}],"termid":"GO:0034676"}


id: PBO:0061756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"out at first homolog","termid":"PBO:0061756"}


id: FYPO:0003704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of histone deacetylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal histone deacetylase activity","termid":"FYPO:0003703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0005447","FYPO:0000641","FYPO:0000652","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone deacetylase activity","synonyms":[{"name":"reduced histone deacetylase activity","type":"exact"}],"termid":"FYPO:0003704"}


id: PBO:0040232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 4","termid":"PBO:0040232"}


id: GO:0102383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviol + UDP-alpha-D-glucose = 19-O-beta-glucopyranosyl-steviol + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"steviol 19-O glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13520"],"termid":"GO:0102383"}


id: GO:0140927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cyclic-di-GMP from one side of a membrane to the other.","definition_xrefs":["PMID:34965418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"cyclic-di-GMP transmembrane transporter activity","termid":"GO:0140927"}


id: GO:0015812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"gamma-aminobutyric acid transport","synonyms":[{"name":"4-aminobutanoate transport","type":"exact"},{"name":"4-aminobutyrate transport","type":"exact"},{"name":"GABA transport","type":"exact"}],"termid":"GO:0015812"}


id: GO:0103035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + methyl-1,4-benzoquinone + NADPH = methyl-1,4-benzoquinol + NADP.","definition_xrefs":["EC:1.6.5.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH:methyl-1,4-benzoquinone oxidoreductase activity (obsolete GO:0103035)","termid":"GO:0103035"}


id: PBO:0002937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3i","termid":"PBO:0002937"}


id: PBO:0059050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid cell nuclear differentiation antigen","termid":"PBO:0059050"}


id: PBO:0048280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 15","termid":"PBO:0048280"}


id: PBO:0059386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S22 pseudogene 1","termid":"PBO:0059386"}


id: GO:0042639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resting phase of hair cycle.","definition_xrefs":["PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cycle phase","termid":"GO:0044851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telogen","synonyms":[{"name":"hair resting phase","type":"narrow"}],"termid":"GO:0042639"}


id: PBO:0047221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 226 member A","termid":"PBO:0047221"}


id: GO:0004179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal amino acid, Xaa-Xbb- from a peptide, amide or arylamide. Xaa is preferably Ala, but may be most amino acids including Pro (slow action). When a terminal hydrophobic residue is followed by a prolyl residue, the two may be released as an intact Xaa-Pro dipeptide.","definition_xrefs":["EC:3.4.11.2"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane alanyl aminopeptidase activity (obsolete GO:0004179)","secondary_identifiers":["MetaCyc:3.4.11.2-RXN"],"synonyms":[{"name":"CD13","type":"related"},{"name":"L-alanine aminopeptidase activity","type":"related"},{"name":"alanine-specific aminopeptidase activity","type":"related"},{"name":"alanyl aminopeptidase activity","type":"related"},{"name":"amino-oligopeptidase activity","type":"related"},{"name":"aminopeptidase M activity","type":"narrow"},{"name":"aminopeptidase N activity","type":"narrow"},{"name":"cysteinylglycinase activity","type":"related"},{"name":"cysteinylglycine dipeptidase activity","type":"related"},{"name":"membrane alanine aminopeptidase activity","type":"narrow"},{"name":"membrane alanyl aminopeptidase activity","type":"exact"},{"name":"membrane aminopeptidase I activity","type":"narrow"},{"name":"microsomal aminopeptidase activity","type":"narrow"},{"name":"particle-bound aminopeptidase activity","type":"narrow"},{"name":"peptidase E activity","type":"broad"},{"name":"pseudo leucine aminopeptidase activity","type":"related"}],"termid":"GO:0004179"}


id: PBO:0065963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 recombinase","termid":"PBO:0065963"}


id: GO:0097200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile, and contributing to the execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","Wikipedia:Caspase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0097153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0008233","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"cysteine-type endopeptidase activity involved in execution phase of apoptosis","synonyms":[{"name":"effector caspase activity","type":"narrow"},{"name":"executioner caspase activity","type":"narrow"}],"termid":"GO:0097200"}


id: FYPO:0002309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of IMP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal IMP binding","termid":"FYPO:0002308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased IMP binding","synonyms":[{"name":"reduced IMP binding","type":"exact"}],"termid":"FYPO:0002309"}


id: GO:0018961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["UM-BBD_pathwayID:pcp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentachlorophenol metabolic process","synonyms":[{"name":"PCP metabolic process","type":"exact"},{"name":"PCP metabolism","type":"exact"},{"name":"pentachlorophenol metabolism","type":"exact"}],"termid":"GO:0018961"}


id: PBO:0056287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase endo-alpha like","termid":"PBO:0056287"}


id: GO:0018823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexa-1,5-diene-1-carbonyl-CoA + H2O = 6-hydroxycyclohex-1-enecarbonyl-CoA.","definition_xrefs":["EC:4.2.1.100","RHEA:21856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"cyclohexa-1,5-dienecarbonyl-CoA hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0203","MetaCyc:4.2.1.100-RXN","KEGG_REACTION:R05597"],"synonyms":[{"name":"6-hydroxycyclohex-1-enecarbonyl-CoA (cyclohexa-1,5-dienecarbonyl-CoA-forming)","type":"related"},{"name":"cyclohex-1,5-diene-1-carbonyl-CoA hydratase activity","type":"exact"},{"name":"cyclohexa-1,5-diene-1-carbonyl-CoA hydratase activity","type":"related"},{"name":"cyclohexa-1,5-diene-1-carboxyl-CoA hydratase activity","type":"related"},{"name":"cyclohexa-1,5-dienecarbonyl-CoA hydro-lyase activity","type":"related"},{"name":"dienoyl-CoA hydratase activity","type":"related"}],"termid":"GO:0018823"}


id: PBO:0052195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMB3 pseudogene 1","termid":"PBO:0052195"}


id: PBO:0076841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric repeat binding factor 2","termid":"PBO:0076841"}


id: PBO:0063467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 subunit alpha 1","termid":"PBO:0063467"}


id: GO:0008572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP required for the ATP-dependent assembly of nucleosome cores, in decondensation of sperm chromatin and in other histone-involving processes.","definition_xrefs":["EC:3.6.4.11"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoplasmin ATPase activity (obsolete GO:0008572)","synonyms":[{"name":"nucleoplasmin ATPase activity","type":"exact"}],"termid":"GO:0008572"}


id: PBO:0067533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 677, pseudogene","termid":"PBO:0067533"}


id: PBO:0059967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 12","termid":"PBO:0059967"}


id: PR:O74802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.09","secondary_identifiers":["UniProtKB:O74802"],"synonyms":[{"name":"3-hydroxyisobutyryl-coenzyme A hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HIB-CoA hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HIBYL-CoA-H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC2D10.09","type":"related"},{"name":"Spom972h-HIBCH","type":"exact"}],"termid":"PR:O74802"}


id: PBO:0078547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 38","termid":"PBO:0078547"}


id: GO:0019921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carboxy-terminal peptidyl-1-thioglycine, which has a carboxy-terminal thiocarboxy-C(=O)-SH bond.","definition_xrefs":["RESID:AA0265","GOC:go_curators","PMID:10660523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-1-thioglycine biosynthetic process from peptidyl-glycine","termid":"GO:0018173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"peptidyl-1-thioglycine biosynthetic process, carboxy-terminal","synonyms":[{"name":"peptidyl-1-thioglycine anabolism, carboxy-terminal","type":"exact"},{"name":"peptidyl-1-thioglycine formation, carboxy-terminal","type":"exact"},{"name":"peptidyl-1-thioglycine synthesis, carboxy-terminal","type":"exact"}],"termid":"GO:0019921"}


id: PR:Q9UT28
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nnt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-methyltransferase nnt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.09c","synonyms":[{"name":"Spom972h-nnt1","type":"exact"},{"name":"nicotinamide N-methyltransferase-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT28"}


id: GO:0060677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth in which the ureteric bud grows along its axis beginning with the growth of the primary ureteric bud and ending when the branches of the bud have elongated.","definition_xrefs":["GOC:dph","PMID:16916378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"ureteric bud morphogenesis","termid":"GO:0060675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud elongation","termid":"GO:0060677"}


id: PBO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotically Upregulated Gene","termid":"PBO:0000310"}


id: PBO:0062519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily K member 5","termid":"PBO:0062519"}


id: PBO:0051648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 3","termid":"PBO:0051648"}


id: GO:1905922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acetylcholine biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:bc","PMID:20164328","GOC:aruk","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of acetylcholine metabolic process","termid":"GO:0060410"},{"relation_name":"is_a","term_name":"regulation of acetylcholine biosynthetic process","termid":"GO:1905921"},{"relation_name":"negatively_regulates","term_name":"acetylcholine biosynthetic process","termid":"GO:0008292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine biosynthetic process","synonyms":[{"name":"down regulation of acetylcholine anabolism","type":"exact"},{"name":"down regulation of acetylcholine biosynthesis","type":"exact"},{"name":"down regulation of acetylcholine biosynthetic process","type":"exact"},{"name":"down regulation of acetylcholine formation","type":"exact"},{"name":"down regulation of acetylcholine synthesis","type":"exact"},{"name":"down-regulation of acetylcholine anabolism","type":"exact"},{"name":"down-regulation of acetylcholine biosynthesis","type":"exact"},{"name":"down-regulation of acetylcholine biosynthetic process","type":"exact"},{"name":"down-regulation of acetylcholine formation","type":"exact"},{"name":"down-regulation of acetylcholine synthesis","type":"exact"},{"name":"downregulation of acetylcholine anabolism","type":"exact"},{"name":"downregulation of acetylcholine biosynthesis","type":"exact"},{"name":"downregulation of acetylcholine biosynthetic process","type":"exact"},{"name":"downregulation of acetylcholine formation","type":"exact"},{"name":"downregulation of acetylcholine synthesis","type":"exact"},{"name":"inhibition of acetylcholine anabolism","type":"narrow"},{"name":"inhibition of acetylcholine biosynthesis","type":"narrow"},{"name":"inhibition of acetylcholine biosynthetic process","type":"narrow"},{"name":"inhibition of acetylcholine formation","type":"narrow"},{"name":"inhibition of acetylcholine synthesis","type":"narrow"},{"name":"negative regulation of acetylcholine anabolism","type":"exact"},{"name":"negative regulation of acetylcholine biosynthesis","type":"exact"},{"name":"negative regulation of acetylcholine formation","type":"exact"},{"name":"negative regulation of acetylcholine synthesis","type":"exact"}],"termid":"GO:1905922"}


id: SO:0000654
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mitochondrial gene located in a maxicircle.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinetoplast_gene","termid":"SO:0000089"},{"relation_name":"part_of","term_name":"maxicircle","termid":"SO:0000742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxicircle_gene","synonyms":[{"name":"maxi-circle gene","type":"exact"},{"name":"maxicircle gene","type":"exact"}],"termid":"SO:0000654"}


id: PBO:0031733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_meiosis","termid":"PBO:0031733"}


id: GO:0031017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the exocrine pancreas over time, from its formation to the mature structure. The exocrine pancreas produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"pancreas development","termid":"GO:0031016"},{"relation_name":"part_of","term_name":"exocrine system development","termid":"GO:0035272"},{"relation_name":"part_of","term_name":"digestive system development","termid":"GO:0055123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exocrine pancreas development","termid":"GO:0031017"}


id: GO:0034905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-chloro-4-hydroxy-2-oxopentanate = pyruvate + chloroacetaldehyde.","definition_xrefs":["UM-BBD_reactionID:r1437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"5-chloro-4-hydroxy-2-oxopentanate aldolase activity","secondary_identifiers":["EC:4.1.3.-"],"termid":"GO:0034905"}


id: GO:0022804
data:
  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id: PBO:0088144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar SNARE protein; functions with Vam3p in vacuolar protein trafficking; has an N-terminal PX domain (phosphoinositide-binding module) that binds PtdIns-3-P and mediates membrane binding; SNAP-25 homolog; protein abundance increases in response to DNA replication stress","termid":"PBO:0088144"}


id: PBO:0085936
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0085936"}


id: PR:O59791
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine racemase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine racemase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.14","secondary_identifiers":["UniProtKB:O59791"],"synonyms":[{"name":"D-serine ammonia-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"D-serine dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L-serine ammonia-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L-serine dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SRR","type":"exact"}],"termid":"PR:O59791"}


id: PBO:0044279
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 2 pseudogene 1","termid":"PBO:0044279"}


id: GO:1990712
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing at least HFE and a transferrin receptor (either TFR1/TFRC or TFR2), proposed to play a role in the sensing of transferrin-bound Fe (Fe2-Tf) on the plasma membrane to regulate hepcidin transcription.","definition_xrefs":["GOC:kom","PMID:25147378","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"HFE-transferrin receptor complex","termid":"GO:1990712"}


id: GO:1900175
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry in the lateral mesoderm.","definition_xrefs":["GOC:TermGenie","GOC:vk","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900175)","synonyms":[{"name":"regulation of nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1900175"}


id: GO:0047207
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->2)-beta-D-fructosyl](n) + [(1->2)-beta-D-fructosyl](m) = [(1->2)-beta-D-fructosyl](n+1) + [(1->2)-beta-D-fructosyl](m-1).","definition_xrefs":["EC:2.4.1.100","MetaCyc:2.4.1.100-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"1,2-beta-fructan 1F-fructosyltransferase activity","synonyms":[{"name":"1,2-beta-D-fructan 1(F)-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-D-fructan 1F-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-D-fructan:1,2-beta-D-fructan 1(F)-beta-D-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-D-fructan:1,2-beta-D-fructan 1F-beta-D-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-fructan 1(F)-fructosyltransferase activity","type":"related"},{"name":"2,1-beta-D-fructan:2,1-beta-D-fructan 1-beta-D-fructosyltransferase activity","type":"related"},{"name":"2,1-fructan:2,1-fructan 1-fructosyltransferase activity","type":"related"},{"name":"FFT activity","type":"related"},{"name":"fructan:fructan fructosyl transferase activity","type":"related"}],"termid":"GO:0047207"}


id: PBO:0002746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN family protein Yip11","termid":"PBO:0002746"}


id: PBO:0088359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph4","termid":"PBO:0088359"}


id: GO:0097539
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nine-bladed, propeller-like protein complex that links the distal end of the basal body and the cilium to the plasma membrane. Functions in protein sorting and gating (i.e. active and passive transport of proteins in and out of the cilium).","definition_xrefs":["PMID:22653444","PMID:5335827","PMID:5064817","GOC:kmv","PMID:24231678","GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ciliary transition fiber","synonyms":[{"name":"centriolar distal appendage","type":"related"},{"name":"cilial transition fiber","type":"exact"},{"name":"cilial transition fibre","type":"exact"},{"name":"ciliary transition fibre","type":"exact"},{"name":"cilium transition fiber","type":"exact"},{"name":"cilium transition fibre","type":"exact"},{"name":"distal appendage of basal body","type":"related"},{"name":"distal appendage of centriole","type":"related"},{"name":"distal appendage of mother centriole","type":"related"},{"name":"transition fiber","type":"broad"},{"name":"transition fibre","type":"broad"}],"termid":"GO:0097539"}


id: PBO:0113008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asn rich cytoplasmic protein with a role in clathrin suppresion; contains RGG motifs; high-copy suppressor of group II intron-splicing defects of a mutation in MRS2 and of a conditional mutation in POL1 (DNA polymerase alpha); possible role in mitochondrial mRNA splicing","termid":"PBO:0113008"}


id: GO:0004238
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of protein and peptide substrates preferentially on carboxyl side of hydrophobic residues.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete meprin A activity (obsolete GO:0004238)","synonyms":[{"name":"N-benzoyl-L-tyrosyl-p-aminobenzoic acid hydrolase activity","type":"related"},{"name":"PABA-peptide hydrolase activity","type":"related"},{"name":"PPH","type":"related"},{"name":"endopeptidase-2 activity","type":"broad"},{"name":"meprin","type":"related"},{"name":"meprin A activity","type":"exact"},{"name":"meprin-a","type":"related"}],"termid":"GO:0004238"}


id: GO:0018644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene + H+ + NADH + O2 = 2-hydroxytoluene + H2O + NAD+.","definition_xrefs":["RHEA:20349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"toluene 2-monooxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:e0222","EC:1.14.13.243","MetaCyc:TOLUENE-2-MONOOXYGENASE-RXN"],"termid":"GO:0018644"}


id: PBO:0083134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual specificity protein phosphatase; dephosphorylates T1 and S5 in  C-terminal domain (CTD) of RNA polymerase II largest subunit, Rpo21p; autoregulates turnover of its mRNA; has a cysteine-rich motif required for function and conserved in eukaryotes; shuttles between the nucleus and cytoplasm; RTR1 has a paralog, RTR2, that arose from the whole genome duplication","termid":"PBO:0083134"}


id: PR:P87139
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C57A7.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.09","synonyms":[{"name":"Spom972h-SPAC57A7.09","type":"exact"}],"termid":"PR:P87139"}


id: PBO:0047955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(19)(p13)","termid":"PBO:0047955"}


id: PBO:0078306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-11","termid":"PBO:0078306"}


id: FYPO:0003512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of hercynine (N(alpha),N(alpha),N(alpha)-trimethyl-L-histidine) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"hercynine absent from cell","synonyms":[{"name":"N(alpha),N(alpha),N(alpha)-trimethyl-L-histidine absent from cell","type":"exact"}],"termid":"FYPO:0003512"}


id: PBO:0042831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin 4, pseudogene","termid":"PBO:0042831"}


id: GO:0018197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-aspartic acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}


id: PBO:0046434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxide hydrolase 4","termid":"PBO:0046434"}


id: GO:0048516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Processes causing the differentiation of an epidermal cell into a trichome cell; as in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398).","definition_xrefs":["GOC:lr"],"gene_count":0,"genotype_count":0,"name":"obsolete trichome initiation (sensu Magnoliophyta) (obsolete GO:0048516)","synonyms":[{"name":"trichome initiation (sensu Magnoliophyta)","type":"exact"}],"termid":"GO:0048516"}


id: PBO:0026944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_centromere_clustering_resulting_in_centromere-spindle_pole_body_colocalization","termid":"PBO:0026944"}


id: GO:0008569
data:
  {"annotated_genes":["SJAG_01613","SJAG_04745","SJAG_01546","SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83939,90907,92911,95359],"is_not":false,"summary":null,"term":"GO:0008569"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule toward the minus end, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah","GOC:vw","PMID:15659646","PMID:32842864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule motor activity","termid":"GO:0003777"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_02286":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003774"],"is_obsolete":false,"name":"minus-end-directed microtubule motor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent microtubule motor activity, minus-end-directed","type":"exact"},{"name":"ATP-dependent minus-end-directed microtubule motor activity","type":"exact"},{"name":"dynein ATPase","type":"narrow"},{"name":"kinesin ATP phosphohydrolase (minus-end-directed)","type":"narrow"},{"name":"microtubule motor activity, minus-end-directed","type":"exact"},{"name":"minus-end-directed ATP-dependent microtubule motor activity","type":"exact"},{"name":"minus-end-directed kinesin ATPase activity","type":"narrow"}],"termid":"GO:0008569","terms_by_termid":{"GO:0008569":null}}


id: GO:0098534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the assembly of one or more centrioles.","definition_xrefs":["GOC:dos","PMID:24075808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"centriole assembly","termid":"GO:0098534"}


id: GO:0050506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + vomilenine = H+ + raucaffricine + UDP.","definition_xrefs":["RHEA:19385","EC:2.4.1.219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"vomilenine glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.219-RXN","KEGG_REACTION:R05882"],"synonyms":[{"name":"UDP-glucose:vomilenine 21-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21beta-D-glucosyltransferase activity","type":"related"},{"name":"vomilenine-glucosyltransferase activity","type":"related"}],"termid":"GO:0050506"}


id: PBO:0081190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 3","termid":"PBO:0081190"}


id: PBO:0053197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LETM1 domain containing 1","termid":"PBO:0053197"}


id: GO:0032353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"negatively_regulates","term_name":"hormone biosynthetic process","termid":"GO:0042446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hormone biosynthetic process","synonyms":[{"name":"down regulation of hormone biosynthetic process","type":"exact"},{"name":"down-regulation of hormone biosynthetic process","type":"exact"},{"name":"downregulation of hormone biosynthetic process","type":"exact"},{"name":"inhibition of hormone biosynthetic process","type":"narrow"}],"termid":"GO:0032353"}


id: GO:1900481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of diacylglycerol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"regulation of diacylglycerol biosynthetic process","termid":"GO:1900480"},{"relation_name":"negatively_regulates","term_name":"diacylglycerol biosynthetic process","termid":"GO:0006651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of diacylglycerol biosynthetic process","synonyms":[{"name":"down regulation of diacylglycerol anabolism","type":"exact"},{"name":"down regulation of diacylglycerol biosynthesis","type":"exact"},{"name":"down regulation of diacylglycerol biosynthetic process","type":"exact"},{"name":"down regulation of diacylglycerol formation","type":"exact"},{"name":"down regulation of diacylglycerol synthesis","type":"exact"},{"name":"down-regulation of diacylglycerol anabolism","type":"exact"},{"name":"down-regulation of diacylglycerol biosynthesis","type":"exact"},{"name":"down-regulation of diacylglycerol biosynthetic process","type":"exact"},{"name":"down-regulation of diacylglycerol formation","type":"exact"},{"name":"down-regulation of diacylglycerol synthesis","type":"exact"},{"name":"downregulation of diacylglycerol anabolism","type":"exact"},{"name":"downregulation of diacylglycerol biosynthesis","type":"exact"},{"name":"downregulation of diacylglycerol biosynthetic process","type":"exact"},{"name":"downregulation of diacylglycerol formation","type":"exact"},{"name":"downregulation of diacylglycerol synthesis","type":"exact"},{"name":"inhibition of diacylglycerol anabolism","type":"exact"},{"name":"inhibition of diacylglycerol biosynthesis","type":"exact"},{"name":"inhibition of diacylglycerol biosynthetic process","type":"narrow"},{"name":"inhibition of diacylglycerol formation","type":"exact"},{"name":"inhibition of diacylglycerol synthesis","type":"exact"},{"name":"negative regulation of diacylglycerol anabolism","type":"exact"},{"name":"negative regulation of diacylglycerol biosynthesis","type":"exact"},{"name":"negative regulation of diacylglycerol formation","type":"exact"},{"name":"negative regulation of diacylglycerol synthesis","type":"exact"}],"termid":"GO:1900481"}


id: GO:0010690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a disturbance in organismal or cellular homeostasis.","definition_xrefs":["GOC:tb","GOC:txnOH","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to stress","termid":"GO:0010690"}


id: FYPO:0004142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene. An RNA polymerase II proximal promoter is a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II.","definition_xrefs":["GO:0000978","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA polymerase II proximal promoter sequence-specific DNA binding","synonyms":[{"name":"decreased transcription factor binding to promoter region","type":"related"},{"name":"reduced RNA polymerase II proximal promoter sequence-specific DNA binding","type":"exact"}],"termid":"FYPO:0004142"}


id: FYPO:0002486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic strand displacement is decreased. Meiotic strand displacement is the part of meiotic recombination in which the broken 3' single-strand DNA molecule that formed heteroduplex DNA with its complement in an intact duplex DNA is rejected.","definition_xrefs":["PMID:22723423","PomBase:mah","GO:0000714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased meiotic strand displacement","synonyms":[{"name":"decreased D-loop unwinding","type":"related"},{"name":"decreased meiotic D-loop dissociation","type":"exact"},{"name":"decreased meiotic D-loop processing","type":"related"},{"name":"reduced meiotic strand displacement","type":"exact"}],"termid":"FYPO:0002486"}


id: GO:0030339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain-acyl ethyl ester + H2O = a long-chain carboxylic acid + ethanol.","definition_xrefs":["EC:3.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"fatty-acyl-ethyl-ester synthase activity","secondary_identifiers":["MetaCyc:FATTY-ACYL-ETHYL-ESTER-SYNTHASE-RXN","RHEA:16641"],"synonyms":[{"name":"FAEE synthase activity","type":"related"},{"name":"FAEES activity","type":"related"},{"name":"fatty-acyl ethyl ester synthase","type":"exact"},{"name":"long-chain-fatty-acyl-ethyl-ester acylhydrolase activity","type":"related"}],"termid":"GO:0030339"}


id: GO:0044799
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric protein complex with iron-sulfur and molybdenum cofactors that functions as a terminal reductase in electron transport pathways that operate during anaerobic nitrate respiration. In E. coli electrons are passed from the FdnGHI complex to the NarGHI complex via menoquinone and menaquinol. Within NarGHI, electrons are passed from the two heme molecules in the NarI subunit down a Fe-S cluster chain in the NarH and NarG subunits to the Molybdenum cofactor, Mo-bisMGD, in the NarG subunit.","definition_xrefs":["PMID:12910261","GOC:bhm","PMID:11289299","PMID:17964535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase complex","termid":"GO:0009325"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"part_of","term_name":"plasma membrane respirasome","termid":"GO:0070470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NarGHI complex","synonyms":[{"name":"cytoplasmic membrane-bound quinol-nitrate oxidoreductase","type":"exact"},{"name":"nitrate reductase A","type":"exact"}],"termid":"GO:0044799"}


id: PBO:0029293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleus_during_meiosis","termid":"PBO:0029293"}


id: GO:0044201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the host nuclear envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear membrane","termid":"GO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear inner membrane","termid":"GO:0044201"}


id: GO:0072397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about the formation and integrity of cytokinetic structures, such as the contractile ring, is received and converted into a molecular signal, contributing to a cytokinesis checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in cytokinesis checkpoint (obsolete GO:0072397)","synonyms":[{"name":"cytokinesis checkpoint sensor mechanism","type":"related"},{"name":"cytokinesis checkpoint sensor process","type":"related"},{"name":"detection of stimulus involved in septin checkpoint","type":"related"},{"name":"sensing involved in cytokinesis checkpoint","type":"related"},{"name":"sensing involved in septin checkpoint","type":"related"},{"name":"septin checkpoint sensor mechanism","type":"related"},{"name":"septin checkpoint sensor process","type":"related"}],"termid":"GO:0072397"}


id: GO:0102586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-malonylglucoside + 1-O-sinapoyl-beta-D-glucose = cyanidin 3-O-[2''-O-(2''-O-(sinapoyl) xylosyl) 6'-O-(p-coumaroyl) glucoside] 5-O-[6''-O-(malonyl) glucoside + beta-D-glucose.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"cyanidin 3-O-[2''-O-(2''-O-(sinapoyl) xylosyl) 6''-O-(p-coumaroyl) glucoside] 5-O-[6''-O-(malonyl) glucoside] sinapoyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15332"],"termid":"GO:0102586"}


id: PBO:0061843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Opa interacting protein 5","termid":"PBO:0061843"}


id: GO:1904763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a chaperone-mediated autophagy translocation complex.","definition_xrefs":["GOC:PARL","PMID:18644871","GOC:pad","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0030163","GO:0044248","GO:0044085","GO:0006914","GO:0065003"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex assembly","synonyms":[{"name":"CMA receptor complex assembly","type":"related"},{"name":"CMA receptor complex formation","type":"related"},{"name":"CMA translocation complex assembly","type":"exact"},{"name":"CMA translocation complex formation","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex assembly","type":"related"},{"name":"chaperone-mediated autophagy receptor complex formation","type":"related"},{"name":"chaperone-mediated autophagy translocation complex formation","type":"exact"}],"termid":"GO:1904763"}


id: PBO:0067017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 28, pseudogene","termid":"PBO:0067017"}


id: GO:2000296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrogen peroxide metabolic process","termid":"GO:0010727"},{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide catabolic process","termid":"GO:2000295"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide catabolic process","termid":"GO:0042744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide catabolic process","synonyms":[{"name":"negative regulation of H2O2 catabolic process","type":"exact"},{"name":"negative regulation of H2O2 scavenging","type":"related"},{"name":"negative regulation of detoxification of H2O2","type":"related"},{"name":"negative regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"negative regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"negative regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"negative regulation of hydrogen peroxide degradation","type":"exact"},{"name":"negative regulation of hydrogen peroxide removal","type":"related"},{"name":"negative regulation of hydrogen peroxide scavenging","type":"related"}],"termid":"GO:2000296"}


id: PBO:0055917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A5, pseudogene","termid":"PBO:0055917"}


id: PBO:0081943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ribbon domain containing 2","termid":"PBO:0081943"}


id: PATO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001057 relative acceleration (obsolete PATO:0001057)","termid":"PATO:0001057"}


id: PBO:0084929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA binding protein, member of the CCCH zinc finger family; similar to mammalian Tis11 protein, which activates transcription and also has a role in mRNA degradation; functions with Tis11p in regulation of iron homeostasis; CTH1 has a paralog, TIS11, that arose from the whole genome duplication","termid":"PBO:0084929"}


id: SO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in an insulator region of a nucleotide molecule, interacts selectively and non-covalently with polypeptide residues.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"},{"relation_name":"part_of","term_name":"insulator","termid":"SO:0000627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulator_binding_site","synonyms":[{"name":"insulator binding site","type":"related"}],"termid":"SO:0001460"}


id: PBO:0040131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 16","termid":"PBO:0040131"}


id: FYPO:0000915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal pyruvate dehydrogenase activity","synonyms":[{"name":"abnormal PDH activity","type":"exact"}],"termid":"FYPO:0000915"}


id: GO:1990887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol + S-adenosyl-L-methionine = ubiquinol-n + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:10419476"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol O-methyltransferase activity (obsolete GO:1990887)","termid":"GO:1990887"}


id: FYPO:0000989
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K 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cell phenotype in which the amount of a specific substance measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01956":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_03689":null,"SJAG_04697":null},"genotype_count":8,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K 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id: FYPO:0006017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing urea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on urea","synonyms":[{"name":"normal cell population growth in presence of urea","type":"exact"},{"name":"normal cell population growth on urea","type":"exact"},{"name":"normal vegetative cell population growth on urea","type":"exact"}],"termid":"FYPO:0006017"}


id: PBO:0075999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STING1 ER exit protein 1","termid":"PBO:0075999"}


id: GO:0021993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which closure points are established at multiple points and along the neural rostrocaudal axis.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of neural tube closure","termid":"GO:0021993"}


id: PBO:0029375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_site_of_double-strand_break","termid":"PBO:0029375"}


id: PBO:0059871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 9","termid":"PBO:0059871"}


id: GO:0051797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hair follicle development.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair cycle","termid":"GO:0042634"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"hair follicle development","termid":"GO:0001942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hair follicle development","termid":"GO:0051797"}


id: GO:0033886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2- and 3-sulfate groups of the polysulfates of cellulose and charonin.","definition_xrefs":["EC:3.1.6.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cellulose-polysulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.7-RXN"],"synonyms":[{"name":"cellulose-sulfate sulfohydrolase activity","type":"related"}],"termid":"GO:0033886"}


id: GO:2000609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thyroid hormone generation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"thyroid hormone generation","termid":"GO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thyroid hormone generation","termid":"GO:2000609"}


id: PBO:0066504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X2","termid":"PBO:0066504"}


id: PBO:0005362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp2 (predicted)","termid":"PBO:0005362"}


id: GO:0051826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synapse structural plasticity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of synapse structural plasticity","termid":"GO:0051823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synapse structural plasticity","synonyms":[{"name":"down regulation of synapse structural plasticity","type":"exact"},{"name":"down-regulation of synapse structural plasticity","type":"exact"},{"name":"downregulation of synapse structural plasticity","type":"exact"},{"name":"inhibition of synapse structural plasticity","type":"narrow"}],"termid":"GO:0051826"}


id: GO:0061890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of astrocyte activation.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:20005821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of astrocyte differentiation","termid":"GO:0048711"},{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"is_a","term_name":"regulation of astrocyte activation","termid":"GO:0061888"},{"relation_name":"is_a","term_name":"positive regulation of neuroinflammatory response","termid":"GO:0150078"},{"relation_name":"positively_regulates","term_name":"astrocyte activation","termid":"GO:0048143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of astrocyte activation","termid":"GO:0061890"}


id: GO:0030428
data:
  {"annotated_genes":["SJAG_03705","SJAG_03748","SJAG_01787","SJAG_01774","SJAG_02169","SJAG_04668","SJAG_01888","SJAG_02022","SJAG_04901","SJAG_04776","SJAG_05001","SJAG_00514","SJAG_00652","SJAG_05285","SJAG_03625","SJAG_01453","SJAG_03581","SJAG_03753","SJAG_00667","SJAG_01181","SJAG_01171","SJAG_00669","SJAG_02222","SJAG_02916","SJAG_04771","SJAG_01456","SJAG_02166","SJAG_03655","SJAG_02379","SJAG_03436","SJAG_04322","SJAG_04690","SJAG_04666","SJAG_01196","SJAG_01718","SJAG_01855","SJAG_01754","SJAG_02215","SJAG_00610","SJAG_00442","SJAG_03379","SJAG_03453","SJAG_01799","SJAG_03704"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90703,96259,85211,99608,97046,107467,100763,84636,102373,113982,86890,89683,92994,95853,113970,86911,88517,103330,98058,83704,86014,84450,96301,98960,85885,102221,86983,106215,102198,98755,93336,88386,107084,109192,88534,89858,98057,110145,91794,110479,112668,83685,86862,111913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000935"},{"annotations":[96261,111919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000936"}]},"cv_name":"cellular_component","definition":"A structure composed of peptidoglycan and often chitin in addition to other materials. It usually forms perpendicular to the long axis of a cell or hypha and grows centripetally from the cell wall to the center of the cell and often functions in the compartmentalization of a cell into two daughter cells.","definition_xrefs":["GOC:clt","ISBN:0471940526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00514":null,"SJAG_00610":null,"SJAG_00652":null,"SJAG_00667":null,"SJAG_00669":null,"SJAG_01171":null,"SJAG_01181":null,"SJAG_01196":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01718":null,"SJAG_01754":null,"SJAG_01774":null,"SJAG_01787":null,"SJAG_01799":null,"SJAG_01855":null,"SJAG_01888":null,"SJAG_02022":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02215":null,"SJAG_02222":null,"SJAG_02379":null,"SJAG_02916":null,"SJAG_03379":null,"SJAG_03436":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_03625":null,"SJAG_03655":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03753":null,"SJAG_04322":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04690":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04901":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell septum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cross wall","type":"exact"},{"name":"septum","type":"broad"}],"termid":"GO:0030428","terms_by_termid":{"GO:0000935":null,"GO:0000936":null}}


id: PBO:0066678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-phosphate and 3'-OH ligase 1","termid":"PBO:0066678"}


id: PBO:0048191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GA binding protein transcription factor subunit alpha","termid":"PBO:0048191"}


id: GO:0001989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as part of the baroreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0721643949"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of the force of heart contraction involved in baroreceptor response to decreased systemic arterial blood pressure (obsolete GO:0001989)","synonyms":[{"name":"increased force of heart contraction during baroreceptor response to decreased systemic arterial blood pressure","type":"related"},{"name":"increased strength of cardiac contraction during baroreceptor response to decreased blood pressure","type":"related"},{"name":"positive regulation of the force of heart contraction during baroreceptor response to decreased systemic arterial blood pressure","type":"related"}],"termid":"GO:0001989"}


id: GO:0050198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cinnamoyl-CoA + 3 H+ + 3 malonyl-CoA = 4 CO2 + 4 CoA + pinosylvin.","definition_xrefs":["RHEA:12552","EC:2.3.1.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"pinosylvin synthase activity","secondary_identifiers":["MetaCyc:PINOSYLVIN-SYNTHASE-RXN","KEGG_REACTION:R02505"],"synonyms":[{"name":"malonyl-CoA:cinnamoyl-CoA malonyltransferase (cyclizing)","type":"related"},{"name":"pine stilbene synthase activity","type":"related"},{"name":"stilbene synthase activity","type":"broad"}],"termid":"GO:0050198"}


id: FYPO:0003503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal length.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal vegetative cell length","synonyms":[{"name":"normal cell length during vegetative growth","type":"exact"},{"name":"normal vegetative cell length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003503"}


id: PBO:0051671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 2","termid":"PBO:0051671"}


id: PBO:0005058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDT malic acid transporter (predicted)","termid":"PBO:0005058"}


id: PBO:0084435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; transcription factor; part of the complex locus MAL6, plays a positive role in the regulation of maltose fermentation","termid":"PBO:0084435"}


id: GO:0102676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: avenasterol + O2 + NADPH + H+ = 5-dehydroavenasterol + 2 H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete avenasterol-desaturase activity (obsolete GO:0102676)","termid":"GO:0102676"}


id: PBO:0028291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_arsenic","termid":"PBO:0028291"}


id: GO:1905560
data:
  {"annotated_genes":["SJAG_04638"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114026],"is_not":false,"summary":null,"term":"GO:1905560"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of kinetochore assembly.","definition_xrefs":["GO_REF:0000058","PMID:18765790","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of kinetochore assembly","termid":"GO:0090234"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"kinetochore assembly","termid":"GO:0051382"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of kinetochore assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901720"],"synonyms":[{"name":"down regulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"down regulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"down regulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"down regulation of kinetochore assembly","type":"exact"},{"name":"down regulation of kinetochore biogenesis","type":"exact"},{"name":"down regulation of kinetochore formation","type":"related"},{"name":"down-regulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"down-regulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"down-regulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"down-regulation of kinetochore assembly","type":"exact"},{"name":"down-regulation of kinetochore formation","type":"related"},{"name":"downregulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"downregulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"downregulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"downregulation of kinetochore assembly","type":"exact"},{"name":"downregulation of kinetochore formation","type":"related"},{"name":"inhibition of centromere and kinetochore complex maturation","type":"narrow"},{"name":"inhibition of centromere/kinetochore complex maturation","type":"narrow"},{"name":"inhibition of chromosome-kinetochore attachment","type":"narrow"},{"name":"inhibition of kinetochore assembly","type":"narrow"},{"name":"inhibition of kinetochore formation","type":"related"},{"name":"negative regulation of NMS complex assembly","type":"narrow"},{"name":"negative regulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"negative regulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"negative regulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"negative regulation of kinetochore formation","type":"related"}],"termid":"GO:1905560","terms_by_termid":{"GO:1905560":null}}


id: PBO:0075092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 141B","termid":"PBO:0075092"}


id: PBO:0031628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_sporulation","termid":"PBO:0031628"}


id: PBO:0082570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Checkpoint protein; involved in the activation of the DNA damage and meiotic pachytene checkpoints; with Mec3p and Ddc1p, forms a clamp that is loaded onto partial duplex DNA; homolog of human and S. pombe Rad1 and U. maydis Rec1 proteins","termid":"PBO:0082570"}


id: PBO:0026746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_polyubiquitination_during_cellular_response_to_UV","termid":"PBO:0026746"}


id: MOD:00292
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-pyruvic acid 2-iminyl-L-lysine.","definition_xrefs":["PubMed:9047371","PubMed:1463470","PubMed:7853400","RESID:AA0287","Unimod:422#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"pyruvic acid iminylated residue","termid":"MOD:01170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-pyruvic acid 2-iminyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([1-carboxyethylidene]amino)hexanoic acid","type":"exact"},{"name":"ACT_SITE Schiff-base intermediate with substrate","type":"exact"},{"name":"N-pyruvic acid 2-iminyl","type":"related"},{"name":"N6-pyruvic acid 2-iminyl-L-lysine","type":"exact"},{"name":"PyruvicAcidIminyl","type":"related"}],"termid":"MOD:00292"}


