# terms

id: PBO:0049396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2 and S-phase expressed 1","termid":"PBO:0049396"}


id: PBO:0030448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphatase_activity","termid":"PBO:0030448"}


id: PBO:0003847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Sof1 (predicted)","termid":"PBO:0003847"}


id: GO:0071397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cholesterol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to sterol","termid":"GO:0036315"},{"relation_name":"is_a","term_name":"response to cholesterol","termid":"GO:0070723"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cholesterol","termid":"GO:0071397"}


id: PBO:0031442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_vegetative_growth","termid":"PBO:0031442"}


id: GO:0060986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a hormone into the circulatory system.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"part_of","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"endocrine hormone secretion","termid":"GO:0060986"}


id: PBO:0042733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein K","termid":"PBO:0042733"}


id: PBO:0067180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 238, pseudogene","termid":"PBO:0067180"}


id: PBO:0055037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2452","termid":"PBO:0055037"}


id: GO:0061559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of a cranial ganglion is generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion morphogenesis","termid":"GO:0061552"},{"relation_name":"part_of","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion morphogenesis","synonyms":[{"name":"cranial ganglia morphogenesis","type":"related"}],"termid":"GO:0061559"}


id: PBO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor, HOPS complex subunit Vam6 (predicted)","termid":"PBO:0001048"}


id: PBO:0109619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 11 pseudogene","termid":"PBO:0109619"}


id: PBO:0063226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH10 divergent transcript","termid":"PBO:0063226"}


id: PBO:0112976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein, major isoform; involved in post-transcriptional control of the proteome; binds to both proteins and to DNA, including replication origins; regulates exocytosis, vesicle transport, Ras/MAPK and rapamycin-sensitive signaling, aggresome formation, the spindle position checkpoint and meiotic commitment; protein abundance and relative distribution to the nucleus increase upon DNA replication stress; antiapoptotic gene; similar to several human 14-3-3 proteins","termid":"PBO:0112976"}


id: PBO:0047055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 117 member A","termid":"PBO:0047055"}


id: PBO:0071644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 8","termid":"PBO:0071644"}


id: FYPO:0003241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation fails to separate chromosomes into two equal masses. Unequal mitotic sister chromatid separation may be complete, with two distinct unequal DNA masses located at or near the ends of an elongated mitotic spindle, or incomplete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"altered DNA level during vegetative growth","termid":"FYPO:0004321"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"unequal mitotic sister chromatid segregation","synonyms":[{"name":"chromosome missegregation","type":"exact"},{"name":"mitotic chromosome nondisjunction","type":"exact"},{"name":"unequal mitotic chromosome segregation","type":"exact"},{"name":"unequal mitotic sister chromatid segregation during vegetative growth","type":"exact"},{"name":"unequal mitotic sister chromatid separation","type":"related"},{"name":"unequal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003241"}


id: PBO:0054700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2109","termid":"PBO:0054700"}


id: PBO:0056494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 2","termid":"PBO:0056494"}


id: GO:0072385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an organelle towards the minus end of a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"minus-end-directed organelle transport along microtubule","synonyms":[{"name":"microtubule minus-end-directed organelle distribution","type":"narrow"},{"name":"microtubule minus-end-directed organelle localization","type":"exact"}],"termid":"GO:0072385"}


id: GO:0036122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the bone morphogenetic protein (BMP) family.","definition_xrefs":["PMID:9660951","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"BMP binding","synonyms":[{"name":"bone morphogenetic protein binding","type":"exact"}],"termid":"GO:0036122"}


id: PBO:0060895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuraminidase 4","termid":"PBO:0060895"}


id: FYPO:0005024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is abnormal along the chromosome arms. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GO:1990891","PMID:21633354","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000337"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid arm separation","synonyms":[{"name":"abnormal mitotic chromosome arm separation","type":"exact"},{"name":"abnormal sister chromatid arm separation during mitosis","type":"exact"},{"name":"abnormal sister chromatid arm separation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid arm separation during vegetative growth","type":"exact"}],"termid":"FYPO:0005024"}


id: FYPO:0005742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is decreased under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal invertase activity","termid":"FYPO:0005741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased invertase activity during glucose starvation","synonyms":[{"name":"decreased beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"decreased invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"decreased invertase activity during glucose depletion","type":"exact"},{"name":"decreased invertase activity during glucose deprivation","type":"exact"},{"name":"decreased invertase activity during glucose limitation","type":"related"},{"name":"reduced invertase activity during glucose starvation","type":"exact"}],"termid":"FYPO:0005742"}


id: PR:O74546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.07","synonyms":[{"name":"Spom972h-omh3","type":"exact"}],"termid":"PR:O74546"}


id: PBO:0075620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty related EVH1 domain containing 1","termid":"PBO:0075620"}


id: PBO:0049327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIE subunit 1","termid":"PBO:0049327"}


id: PBO:0048107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far upstream element binding protein 3","termid":"PBO:0048107"}


id: PBO:0005751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tyrosine-tRNA ligase (predicted)","termid":"PBO:0005751"}


id: GO:0035243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.","definition_xrefs":["PMID:14705965","RESID:AA0067","EC:2.1.1.320","RESID:AA0069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016741","GO:0003674","GO:0003824","GO:0016740","GO:0008276"],"is_obsolete":false,"name":"protein-arginine omega-N symmetric methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-6804383","RHEA:48108"],"synonyms":[{"name":"S-adenosyl-L-methionine:[protein]-L-arginine N-methyltransferase ([protein]-Nomega,Nomega'-dimethyl-L-arginine-forming)","type":"related"},{"name":"protein arginine omega-N symmetric methylase activity","type":"exact"},{"name":"protein arginine omega-N symmetric methyltransferase activity","type":"exact"},{"name":"type II PRMT activity","type":"related"},{"name":"type II protein arginine methyltransferase activity","type":"related"}],"termid":"GO:0035243"}


id: PBO:0027197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubule_formation_from_nuclear_microtubules_following_nuclear_envelope_breakthrough","termid":"PBO:0027197"}


id: PBO:0089227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane phospholipid-translocating ATPase complex, ATPase subunit","termid":"PBO:0089227"}


id: PBO:0067472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 602, pseudogene","termid":"PBO:0067472"}


id: PBO:0031296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated,_multiseptate_cell","termid":"PBO:0031296"}


id: GO:1904172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bleb assembly.","definition_xrefs":["GOC:als","GO_REF:0000058","PMID:25651887","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of bleb assembly","termid":"GO:1904170"},{"relation_name":"positively_regulates","term_name":"bleb assembly","termid":"GO:0032060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of bleb assembly","synonyms":[{"name":"activation of bleb assembly","type":"narrow"},{"name":"activation of cell blebbing","type":"narrow"},{"name":"positive regulation of cell blebbing","type":"exact"},{"name":"up regulation of bleb assembly","type":"exact"},{"name":"up regulation of cell blebbing","type":"exact"},{"name":"up-regulation of bleb assembly","type":"exact"},{"name":"up-regulation of cell blebbing","type":"exact"},{"name":"upregulation of bleb assembly","type":"exact"},{"name":"upregulation of cell blebbing","type":"exact"}],"termid":"GO:1904172"}


id: PBO:0088469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex bromodomain subunit Rsc4","termid":"PBO:0088469"}


id: GO:0006305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of alkyl groups to many positions on all four bases of DNA. Alkylating agents can also modify the bases of incoming nucleotides in the course of DNA synthesis.","definition_xrefs":["ISBN:0716735970"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA alkylation (obsolete GO:0006305)","termid":"GO:0006305"}


id: GO:0047648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methylhexanamide + H2O = hexanoate + methylammonium.","definition_xrefs":["EC:3.5.1.39","RHEA:20081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"alkylamidase activity","secondary_identifiers":["MetaCyc:ALKYLAMIDASE-RXN","KEGG_REACTION:R03620"],"synonyms":[{"name":"N-methylhexanamide amidohydrolase activity","type":"related"}],"termid":"GO:0047648"}


id: PBO:0040099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 5","termid":"PBO:0040099"}


id: PBO:0088763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase","termid":"PBO:0088763"}


id: PBO:0068063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 368","termid":"PBO:0068063"}


id: PBO:0080144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle amine transport 1 like","termid":"PBO:0080144"}


id: PBO:0003678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family Isp4","termid":"PBO:0003678"}


id: PR:O94374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit alpha-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.08c","synonyms":[{"name":"Spom972h-imp1","type":"exact"},{"name":"importin-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit alpha-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94374"}


id: GO:0003176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the aortic valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semi-lunar valve development","termid":"GO:1905314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aortic valve development","termid":"GO:0003176"}


id: PBO:0042261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 5","termid":"PBO:0042261"}


id: PBO:0014278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit Mmm1 (predicted)","termid":"PBO:0014278"}


id: GO:0080067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methylthiobutyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 4-methylthiobutyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desulfoglucosinolate sulfotransferase activity","termid":"GO:0047364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"4-methylthiobutyl-desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4329"],"termid":"GO:0080067"}


id: GO:0009408
data:
  {"annotated_genes":["SJAG_02381","SJAG_04567","SJAG_04082","SJAG_03319","SJAG_04388","SJAG_01186","SJAG_03949","SJAG_03527","SJAG_04055","SJAG_00436","SJAG_02426","SJAG_02266","SJAG_04187","SJAG_03815","SJAG_01584"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100344,100452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[85007,101394,88220,111620,96665,101109,91836,92621,106132,86953,106133,111619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[112552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01584":null,"SJAG_02266":null,"SJAG_02381":null,"SJAG_02426":null,"SJAG_03319":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03949":null,"SJAG_04055":null,"SJAG_04082":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to heat","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006951"],"synonyms":[{"name":"response to heat shock","type":"narrow"}],"termid":"GO:0009408","terms_by_termid":{"GO:0031990":null,"GO:0034605":null,"GO:0070370":null}}


id: PBO:0110066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, implicated in rRNA processing from interactions, human TTC27 ortholog","termid":"PBO:0110066"}


id: PATO:0001180
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001180 relative response (obsolete PATO:0001180)","termid":"PATO:0001180"}


id: SO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of sequence that has been inserted and is being propagated by the clone.","direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"},{"relation_name":"part_of","term_name":"clone_insert","termid":"SO:0000753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cloned_region","synonyms":[{"name":"cloned region","type":"exact"},{"name":"cloned segment","type":"exact"}],"termid":"SO:0000785"}


id: PBO:0079068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-2","termid":"PBO:0079068"}


id: PBO:0054405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1801","termid":"PBO:0054405"}


id: GO:0045025
data:
  {"annotated_genes":["SJAG_02991"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95084],"is_not":false,"summary":null,"term":"GO:0045025"}]},"cv_name":"cellular_component","definition":"A mitochondrial protein complex with 3' to 5' exoribonuclease activity that participates in intron-independent turnover and processing of mitochondrial transcripts. In humans, the mitochondrial degradosome is a pentameric complex, and in yeast it exists as a heterodimer.","definition_xrefs":["PMID:9829834","PMID:10397341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic exosome (RNase complex)","termid":"GO:0000177"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial degradosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mtEXO","type":"exact"}],"termid":"GO:0045025","terms_by_termid":{"GO:0045025":null}}


id: GO:0044219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one host cell to that of an adjacent host cell.","definition_xrefs":["PMID:16903353","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell junction","termid":"GO:0044156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell plasmodesma","termid":"GO:0044219"}


id: PBO:0044794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 7, pseudogene","termid":"PBO:0044794"}


id: PR:Q2EEM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q2EEM0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.12","synonyms":[{"name":"Spom972h-SPAC27E2.12","type":"exact"}],"termid":"PR:Q2EEM0"}


id: PBO:0083746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the TIM23 complex; acts as receptor for the translocase of the inner mitochondrial membrane (TIM23) complex guiding incoming precursors from the TOM complex; may control the gating of the Tim23p-Tim17p channel","termid":"PBO:0083746"}


id: GO:0042509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:11426647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"},{"relation_name":"regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042519","GO:0042528","GO:0042522","GO:0042525","GO:0042510","GO:0042513","GO:0042516"],"synonyms":[{"name":"regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042509"}


id: PBO:0074577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 33","termid":"PBO:0074577"}


id: PBO:0067326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 417, pseudogene","termid":"PBO:0067326"}


id: PBO:0050642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 7, pseudogene","termid":"PBO:0050642"}


id: PBO:0055597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3033","termid":"PBO:0055597"}


id: PBO:0067640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 813, pseudogene","termid":"PBO:0067640"}


id: PBO:0053060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LASP1 neighbor","termid":"PBO:0053060"}


id: GO:0097271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location within a cellular bud neck.","definition_xrefs":["GOC:rb","PMID:22344253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to bud neck","synonyms":[{"name":"protein localisation to bud neck","type":"exact"},{"name":"protein localization to cellular bud neck","type":"exact"}],"termid":"GO:0097271"}


id: GO:1904186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly ofa post-anaphase microtubule array.","definition_xrefs":["GOC:TermGenie","PMID:15004232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-anaphase microtubule array organization","synonyms":[{"name":"PAA organization","type":"exact"},{"name":"post-anaphase array organization","type":"exact"},{"name":"post-anaphase microtubule array organisation","type":"exact"}],"termid":"GO:1904186"}


id: PBO:0057873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3180-2","termid":"PBO:0057873"}


id: MOD:01278
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:253#K","PubMed:11283024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crotonaldehyde","termid":"MOD:00576"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crotonaldehyde - site K","synonyms":[{"name":"Crotonaldehyde","type":"related"}],"termid":"MOD:01278"}


id: PBO:0047594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGR proto-oncogene, Src family tyrosine kinase","termid":"PBO:0047594"}


id: PBO:0041183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 3","termid":"PBO:0041183"}


id: PBO:0013086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, Dbl3","termid":"PBO:0013086"}


id: GO:0052595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide + H+.","definition_xrefs":["MetaCyc:AMINEOXID-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","termid":"GO:0016641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aliphatic amine oxidase activity","secondary_identifiers":["EC:1.4.3.21","RHEA:16153"],"synonyms":[{"name":"aliphatic-amine oxidase activity","type":"exact"},{"name":"aliphatic-amine:oxygen oxidoreductase(deaminating) activity","type":"exact"}],"termid":"GO:0052595"}


id: GO:0022858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of alanine from one side of a membrane to the other. Alanine is 2-aminopropanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"alanine transmembrane transporter activity","termid":"GO:0022858"}


id: FYPO:0002420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce cell that has an abnormal shape and undergoes a single round of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, abnormal cell shape","synonyms":[{"name":"inviable following spore germination, single cell division, abnormal cell shape","type":"exact"},{"name":"inviable germinated spore, single cell division, abnormal cell shape","type":"exact"},{"name":"lethal after spore germination, single cell division, abnormal cell shape","type":"exact"}],"termid":"FYPO:0002420"}


id: GO:0044465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal, in a different organism.","definition_xrefs":["GOC:ed","PMID:18579526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"},{"relation_name":"is_a","term_name":"regulation of sensory perception of pain","termid":"GO:0051930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of sensory perception of pain in another organism","synonyms":[{"name":"modulation of sensory perception of pain in other organism","type":"exact"},{"name":"regulation of sensory perception of pain in another organism","type":"exact"}],"termid":"GO:0044465"}


id: GO:0102279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-cis retinol-[cellular-retinol-binding-protein] + a phosphatidylcholine = a cellular-retinol-binding protein + an 11-cis-retinyl ester + a 1-lysophosphatidylcholine.","definition_xrefs":["GOC:pz","EC:2.3.1.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"lecithin:11-cis retinol acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12563"],"termid":"GO:0102279"}


id: PBO:0047108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 157 member A","termid":"PBO:0047108"}


id: GO:0097051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the endoplasmic reticulum membrane.","definition_xrefs":["GOC:rb","PMID:9388185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to endoplasmic reticulum","termid":"GO:0072599"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to endoplasmic reticulum membrane","synonyms":[{"name":"establishment of protein localisation in endoplasmic reticulum membrane","type":"exact"},{"name":"establishment of protein localization in endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0097051"}


id: GO:0009296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The assembly of a flagellum. In bacteria, this is a whiplike motility appendage present on the surface of some species; in eukaryotes, flagella are threadlike protoplasmic extensions used to propel flagellates and sperm. Flagella are composed of flagellin and have the same basic structure as cilia but are longer in proportion to the cell and present in much smaller numbers.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellum assembly (obsolete GO:0009296)","synonyms":[{"name":"flagella assembly","type":"exact"},{"name":"flagella biogenesis","type":"related"},{"name":"flagellum assembly","type":"exact"},{"name":"flagellum biogenesis","type":"related"}],"termid":"GO:0009296"}


id: MOD:01404
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-asparagine residue to form L-asparagine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:7592021","PubMed:8557573","RESID:AA0481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,3-diamino-3-oxopropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1,3-bisazanyl-3-oxopropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Asn-Cys)","type":"exact"},{"name":"L-asparagine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01404"}


id: SO:0000684
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence targeted by a nuclease enzyme.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_binding_site","termid":"SO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease_sensitive_site","synonyms":[{"name":"nuclease sensitive site","type":"exact"}],"termid":"SO:0000684"}


id: PR:Q9C0X3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13G1.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.15c","synonyms":[{"name":"Spom972h-SPBC13G1.15c","type":"exact"}],"termid":"PR:Q9C0X3"}


id: GO:0031222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arabinan, a polysaccharide composed of arabinose residues.","definition_xrefs":["GOC:mlg","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"arabinan metabolic process","termid":"GO:0031221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"arabinan catabolic process","synonyms":[{"name":"arabinan breakdown","type":"exact"},{"name":"arabinan catabolism","type":"exact"},{"name":"arabinan degradation","type":"exact"}],"termid":"GO:0031222"}


id: GO:2000648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stem cell proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"positively_regulates","term_name":"stem cell proliferation","termid":"GO:0072089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stem cell proliferation","termid":"GO:2000648"}


id: GO:0021809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Signaling between members of the neurotrophin family and their receptors that result in the start of cell motility as a component of the process of cerebral cortex glial-mediated radial migration.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dph","GOC:dgh","PMID:12626695"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophic factor signaling initiating cell movement, involved in cerebral cortex radial glia guided migration (obsolete GO:0021809)","synonyms":[{"name":"neurotrophic factor signalling initiating cell movement, involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021809"}


id: PBO:0004449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pho85 family (predicted)","termid":"PBO:0004449"}


id: PBO:0042779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 97","termid":"PBO:0042779"}


id: PBO:0054522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1922","termid":"PBO:0054522"}


id: FYPO:0004072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during a cellular response to a pheromone. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to pheromone","termid":"FYPO:0003426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to pheromone","synonyms":[{"name":"transcripts absent from cell during cellular response to pheromone","type":"exact"},{"name":"undetectable RNA level during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0004072"}


id: PR:000085738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at the second and fifth positions of one or more of the C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PMID:11387325","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"has_part","term_name":"O-phospho-L-serine","termid":"MOD:00046"},{"relation_name":"is_a","term_name":"rpb1/Phos(CTD-S2,S5,S7)","termid":"PR:000050494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S2,S5)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:1","type":"exact"},{"name":"rpb1/Phos(CTD-S2,S5)","type":"exact"}],"termid":"PR:000085738"}


id: GO:0030810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of nucleotide biosynthetic process","termid":"GO:0030808"},{"relation_name":"is_a","term_name":"positive regulation of nucleotide metabolic process","termid":"GO:0045981"},{"relation_name":"positively_regulates","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleotide biosynthetic process","synonyms":[{"name":"activation of nucleotide biosynthetic process","type":"narrow"},{"name":"positive regulation of nucleotide anabolism","type":"exact"},{"name":"positive regulation of nucleotide biosynthesis","type":"exact"},{"name":"positive regulation of nucleotide formation","type":"exact"},{"name":"positive regulation of nucleotide synthesis","type":"exact"},{"name":"stimulation of nucleotide biosynthetic process","type":"narrow"},{"name":"up regulation of nucleotide biosynthetic process","type":"exact"},{"name":"up-regulation of nucleotide biosynthetic process","type":"exact"},{"name":"upregulation of nucleotide biosynthetic process","type":"exact"}],"termid":"GO:0030810"}


id: GO:0008197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete yolk protein (obsolete GO:0008197)","synonyms":[{"name":"yolk protein","type":"exact"}],"termid":"GO:0008197"}


id: PBO:0002417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Has1 (predicted)","termid":"PBO:0002417"}


id: GO:0008110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-histidine = 3-(imidazol-5-yl)pyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.38","RHEA:16565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"L-histidine:2-oxoglutarate aminotransferase activity","secondary_identifiers":["KEGG_REACTION:R01161","MetaCyc:HISTTRANSAM-RXN"],"synonyms":[{"name":"histidine aminotransferase activity","type":"broad"},{"name":"histidine transaminase activity","type":"broad"},{"name":"histidine-2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0008110"}


id: PBO:0072466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 30","termid":"PBO:0072466"}


id: GO:0097305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alcohol stimulus.","definition_xrefs":["GOC:pr","PMID:24014527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alcohol","secondary_identifiers":["GO:1990335"],"synonyms":[{"name":"process resulting in tolerance to alcohol","type":"narrow"}],"termid":"GO:0097305"}


id: PBO:0062438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 102 pseudogene","termid":"PBO:0062438"}


id: RO:0002309
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an exposure event or process and any agent, stimulus, activity, or event that causally effects an organism and interacts with an exposure receptor during an exposure event.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_exposure_to","termid":"RO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_stimulus","termid":"RO:0002309"}


id: PR:O94547
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase srk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.08","synonyms":[{"name":"Spom972h-srk1","type":"exact"},{"name":"sty1-regulated kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94547"}


id: PBO:0069917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1209, pseudogene","termid":"PBO:0069917"}


id: PBO:0074301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1A-SULT1A3 readthrough (NMD candidate)","termid":"PBO:0074301"}


id: PBO:0057080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181a-2","termid":"PBO:0057080"}


id: PBO:0082727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rix1 complex and possibly pre-replicative complexes; required for processing of ITS2 sequences from 35S pre-rRNA; component of the pre-60S ribosomal particle with the dynein-related AAA-type ATPase Mdn1p; required for pre-replicative complex (pre-RC) formation and maintenance during DNA replication licensing; relocalizes to the cytosol in response to hypoxia; essential gene","termid":"PBO:0082727"}


id: PBO:0074961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-3","termid":"PBO:0074961"}


id: PBO:0053622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 664","termid":"PBO:0053622"}


id: PATO:0000192
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000192 locomotor_activity (obsolete PATO:0000192)","termid":"PATO:0000192"}


id: PBO:0046947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 72 member D","termid":"PBO:0046947"}


id: FYPO:0000804
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115378,115385,115290,115383],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[115548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[115657],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0006433"},{"annotations":[115291,115466,115459,115645,115458,115638,115465,115637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[115698,115697,115700,115709,115712],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001784"},{"annotations":[115703,115708,115699,115695,115711,115696],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[115542],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endomembrane system organization is abnormal. 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S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal endomembrane system organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_00426","SJAG_01906","SJAG_04464","SJAG_03892","SJAG_03891","SJAG_05207","SJAG_01242","SJAG_03940","SJAG_04284","SJAG_01745","SJAG_03449","SJAG_02763"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","nem1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","alx1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","vps32delta","ned1delta","nup61delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","vps4delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","lem2delta"],"synonyms":[{"name":"abnormal endomembrane system organisation","type":"exact"},{"name":"abnormal endomembrane system organization during mitotic cell cycle","type":"related"},{"name":"abnormal endomembrane system organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000804","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0006433":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: FYPO:0002485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of two meiotic reciprocal recombination events (crossovers) close to each other is decresed. As a result, the resolution of meiotic recombination intermediates results in the formation of a crossover at a lower frequency than normal, and the occurrence of intergenic meiotic recombination is decreased.","definition_xrefs":["PMID:22723423","PomBase:gs","PomBase:mah","PMID:16169489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"decreased intergenic meiotic recombination","secondary_identifiers":["FYPO:0003180"],"synonyms":[{"name":"decreased meiotic intergenic recombination","type":"exact"},{"name":"decreased occurrence of meiotic cross-overs","type":"related"},{"name":"decreased resolution of meiotic recombination intermediates with crossover formation","type":"exact"},{"name":"reduced intergenic meiotic recombination","type":"exact"},{"name":"reduced resolution of meiotic recombination intermediates with crossover formation","type":"exact"}],"termid":"FYPO:0002485"}


id: PBO:0073302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 24","termid":"PBO:0073302"}


id: FYPO:0003402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to osmotic stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to osmotic stress","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to osmotic stress","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to osmotic stress during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to osmotic stress","type":"exact"}],"termid":"FYPO:0003402"}


id: GO:0062009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the secondary palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The secondary palate is the part of the palate formed from the fusion of the two palatine shelves, extensions of the maxillary prominences.","definition_xrefs":["PMID:28784960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roof of mouth development","termid":"GO:0060021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary palate development","termid":"GO:0062009"}


id: PBO:0041906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene B","termid":"PBO:0041906"}


id: GO:1902942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated chloride channel activity.","definition_xrefs":["GO_REF:0000059","PMID:22006324","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of anion channel activity","termid":"GO:0010360"},{"relation_name":"is_a","term_name":"regulation of voltage-gated chloride channel activity","termid":"GO:1902941"},{"relation_name":"is_a","term_name":"negative regulation of inorganic anion transmembrane transport","termid":"GO:1903796"},{"relation_name":"is_a","term_name":"negative regulation of chloride transport","termid":"GO:2001226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of voltage-gated chloride channel activity","synonyms":[{"name":"down regulation of voltage gated chloride channel activity","type":"exact"},{"name":"down regulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"down regulation of voltage-gated chloride channel activity","type":"exact"},{"name":"down-regulation of voltage gated chloride channel activity","type":"exact"},{"name":"down-regulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"down-regulation of voltage-gated chloride channel activity","type":"exact"},{"name":"downregulation of voltage gated chloride channel activity","type":"exact"},{"name":"downregulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"downregulation of voltage-gated chloride channel activity","type":"exact"},{"name":"inhibition of voltage gated chloride channel activity","type":"narrow"},{"name":"inhibition of voltage-dependent chloride channel activity","type":"narrow"},{"name":"inhibition of voltage-gated chloride channel activity","type":"narrow"},{"name":"negative regulation of voltage gated chloride channel activity","type":"exact"},{"name":"negative regulation of voltage-dependent chloride channel activity","type":"exact"}],"termid":"GO:1902942"}


id: SO:0001314
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1,2'-O-dimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_two_prime_O_dimethyladenosine","secondary_identifiers":["RNAMOD:097"],"synonyms":[{"name":"1,2'-O-dimethyladenosine","type":"exact"},{"name":"m1Am","type":"exact"},{"name":"one two prime O dimethyladenosine","type":"exact"}],"termid":"SO:0001314"}


id: PBO:0069548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 819, pseudogene","termid":"PBO:0069548"}


id: PBO:0059484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSRA divergent transcript","termid":"PBO:0059484"}


id: GO:0052419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of substance in symbiont (obsolete GO:0052419)","termid":"GO:0052419"}


id: PBO:0081067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 1","termid":"PBO:0081067"}


id: PBO:0076002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal interaction molecule 1","termid":"PBO:0076002"}


id: PBO:0084242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Initiator methionine 2'-O-ribosyl phosphate transferase; modifies the initiator methionine tRNA at position 64 to distinguish it from elongator methionine tRNA","termid":"PBO:0084242"}


id: PR:O14261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taz1-interacting factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.04","synonyms":[{"name":"Spom972h-atg11","type":"exact"},{"name":"autophagy-related protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytoplasm to vacuole targeting protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein taf1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14261"}


id: PBO:0062015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 5","termid":"PBO:0062015"}


id: CHEBI:46442
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vanadate(3-)","termid":"CHEBI:46442"}


id: GO:0030667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a secretory granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"secretory granule membrane","synonyms":[{"name":"secretory vesicle membrane","type":"broad"}],"termid":"GO:0030667"}


id: PBO:0050984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 56","termid":"PBO:0050984"}


id: GO:0031485
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XV myosin heavy chain and associated light chains. Myosin XV is single headed, and has a large extension (1200aa) at the N-terminus of the motor domain, two IQ motifs and a tail with a similar domain structure to that of the tail of myosin VII.","definition_xrefs":["PMID:10722873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"myosin XV complex","termid":"GO:0031485"}


id: PBO:0063406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 2","termid":"PBO:0063406"}


id: GO:1990111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteasome specifically found in mammalian testis. Contains the proteasome activator PA200 in the regulatory particle, and beta1i, beta2i, beta5i and/or alpha4s in the core (20S) subunit. Beta1i, beta2i and beta5i are inducible catalytic subunits, closely related to beta1, beta2 and beta5. Alpha4s is a sperm-specific 20S subunit, but unlike other alternative 20S subunits alpha4s lies in the outer alpha-ring and lacks catalytic activity.","definition_xrefs":["PMID:23706739","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"spermatoproteasome complex","termid":"GO:1990111"}


id: PBO:0063707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 2","termid":"PBO:0063707"}


id: GO:0102160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + UDP-alpha-D-glucuronate = H+ + cyanidin 3-O-beta-(2-O-beta-D-glucuronosyl)-beta-D-glucoside + UDP.","definition_xrefs":["EC:2.4.1.254","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"cyanidin-3-O-glucoside 2-O-glucuronosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11756","RHEA:28258"],"termid":"GO:0102160"}


id: GO:0018810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-(2-(3-hydroxy)-thionaphthenyl)-2-oxo-3-butenoate + H2O = pyruvate + 3-hydroxy-2-formylbenzothiophene.","definition_xrefs":["UM-BBD_reactionID:r0164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"trans-4-[2-(3-hydroxy)-thionaphthenyl]-2-oxo-3-butenoate hydratase activity","termid":"GO:0018810"}


id: GO:0030088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete PSII associated light-harvesting complex II, core complex, LHCIId subcomplex (obsolete GO:0030088)","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIId subcomplex","type":"exact"}],"termid":"GO:0030088"}


id: PBO:0044079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin pseudogene 1","termid":"PBO:0044079"}


id: GO:0042734
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane.","definition_xrefs":["GOC:jl","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"presynaptic membrane","synonyms":[{"name":"pre-synaptic membrane","type":"exact"},{"name":"presynaptic plasma membrane","type":"exact"}],"termid":"GO:0042734"}


id: GO:0047506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dAMP = ADP + dADP.","definition_xrefs":["EC:2.7.4.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"(deoxy)adenylate kinase activity","secondary_identifiers":["MetaCyc:DEOXYADENYLATE-KINASE-RXN","RHEA:23100"],"synonyms":[{"name":"ATP:(d)AMP phosphotransferase activity","type":"related"}],"termid":"GO:0047506"}


id: GO:0051648
data:
  {"annotated_genes":["SJAG_04960","SJAG_03005","SJAG_04391","SJAG_03864","SJAG_03938","SJAG_04044","SJAG_00938","SJAG_03268","SJAG_00284","SJAG_02166","SJAG_03357","SJAG_03011","SJAG_01925","SJAG_02320"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89350,113854],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91658],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[114542],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[110005,114938,98055,113839,95681,86894,110287,84796],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[112320,104267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"Any process in which a vesicle or vesicles are transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00938":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vesicle localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic vesicle localization","type":"exact"},{"name":"establishment and maintenance of vesicle localization","type":"exact"},{"name":"vesicle localisation","type":"exact"}],"termid":"GO:0051648","terms_by_termid":{"GO:0030050":null,"GO:0048205":null,"GO:0048208":null,"GO:0090522":null,"GO:0099022":null}}


id: GO:0035660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like 4 receptor, where the MyD88 adaptor molecule mediates transduction of the signal. Toll-like 4 receptors bind bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["PMID:18304834","PMID:20385024","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0002755"},{"relation_name":"is_a","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"MyD88-dependent toll-like receptor 4 signaling pathway","synonyms":[{"name":"MyD88-dependent TLR4 signaling pathway","type":"exact"},{"name":"MyD88-dependent toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0035660"}


id: PBO:0029956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_lag_phase","termid":"PBO:0029956"}


id: PBO:0039456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 7","termid":"PBO:0039456"}


id: PBO:0049719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 4 pseudogene 1","termid":"PBO:0049719"}


id: FYPO:0005079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:21151114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at centromere central core","synonyms":[{"name":"normal protein localisation to chromatin at centromere central core","type":"exact"},{"name":"normal protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric central core","type":"exact"}],"termid":"FYPO:0005079"}


id: PATO:0000226
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000226 tactile response (obsolete PATO:0000226)","termid":"PATO:0000226"}


id: PBO:0086188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to bacterial secreted DfsB proteins; null mutant displays increased levels of spontaneous Rad52p foci; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0086188"}


id: PR:P28189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11885:SF1","OMA:SCHPO01149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.07c","secondary_identifiers":["UniProtKB:P28189"],"synonyms":[{"name":"Spom972h-RPS13","type":"exact"}],"termid":"PR:P28189"}


id: PBO:0060482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 4","termid":"PBO:0060482"}


id: PBO:0039296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG10 alpha-1,2-glucosyltransferase B","termid":"PBO:0039296"}


id: GO:0031009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ADPG pyrophosphorylase complex found in a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotetrameric ADPG pyrophosphorylase complex","termid":"GO:0030931"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid ADPG pyrophosphorylase complex","termid":"GO:0031009"}


id: GO:0002408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a myeloid dendritic cell in response to an external stimulus.","definition_xrefs":["PMID:16056255","GOC:add","ISBN:0781735149","PMID:15814331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}


id: GO:0140206
data:
  {"annotated_genes":["SJAG_01983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99144],"is_not":false,"summary":null,"term":"GO:0140206"}]},"cv_name":"biological_process","definition":"The directed movement of a dipeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:22226946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dipeptide transmembrane transport","termid":"GO:0035442"},{"relation_name":"is_a","term_name":"oligopeptide import across plasma membrane","termid":"GO:0140205"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"dipeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140206","terms_by_termid":{"GO:0140206":null}}


id: PBO:0062332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 71 pseudogene","termid":"PBO:0062332"}


id: GO:0010549
data:
  {"annotated_genes":["SJAG_00680","SJAG_00840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99808,89973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905557"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane disassembly.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"membrane disassembly","termid":"GO:0030397"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_00840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of membrane disassembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010549","terms_by_termid":{"GO:1905557":null}}


id: PBO:0029929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_IMP_binding","termid":"PBO:0029929"}


id: PBO:0084680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial beta-keto-acyl synthase; possible role in fatty acid synthesis; required for mitochondrial respiration; human homolog OXSM can complement yeast cem1 null mutant","termid":"PBO:0084680"}


id: FYPO:0004311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CENP-A containing chromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to CENP-A containing chromatin","synonyms":[{"name":"abnormal protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"abnormal protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to centromeric core region chromatin","type":"exact"}],"termid":"FYPO:0004311"}


id: GO:0018951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-xylene, (1,4-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-xylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:pxy"],"synonyms":[{"name":"p-xylene metabolism","type":"exact"},{"name":"para-xylene metabolic process","type":"exact"},{"name":"para-xylene metabolism","type":"exact"}],"termid":"GO:0018951"}


id: GO:0043714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + acetyl-CoA + H2O = (R)-citramalate + CoA.","definition_xrefs":["PMID:9864346","GOC:jl","RHEA:19045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"(R)-citramalate synthase activity","secondary_identifiers":["EC:2.3.3.21","MetaCyc:RXN-7743"],"synonyms":[{"name":"citramalate synthase","type":"broad"}],"termid":"GO:0043714"}


id: PBO:0075796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sex determining region Y","termid":"PBO:0075796"}


id: PBO:0060575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 11","termid":"PBO:0060575"}


id: PBO:0052370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 18A","termid":"PBO:0052370"}


id: PBO:0072072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 2","termid":"PBO:0072072"}


id: PBO:0060160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 8 (pseudogene)","termid":"PBO:0060160"}


id: PBO:0069961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1255, pseudogene","termid":"PBO:0069961"}


id: GO:0019092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a srRNA, small subunit ribosomal ribonucleic acid, is transported from the mitochondrial matrix into the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial rRNA export from mitochondrion","termid":"GO:0019090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"mitochondrial srRNA export from mitochondrion","synonyms":[{"name":"export of mitochondrial srRNA","type":"broad"},{"name":"mitochondrial srRNA export","type":"exact"},{"name":"mitochondrial srRNA export from mitochondria","type":"exact"},{"name":"mitochondrial srRNA export out of mitochondrion","type":"exact"},{"name":"mitochondrial srRNA transport from mitochondrion","type":"exact"},{"name":"mitochondrial srRNA, mitochondrial export","type":"exact"}],"termid":"GO:0019092"}


id: PBO:0113310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic crossing over; component of the Synaptonemal Complex (SC) along with Ecm11p; required for the efficient loading of the SC transverse filament protein, Zip1p; promotes SUMOylation of Ecm11p; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; transcription is regulated by Ume6p and induced in response to alpha factor; also detected in peroxisomes","termid":"PBO:0113310"}


id: PBO:0053166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liver enriched antimicrobial peptide 2","termid":"PBO:0053166"}


id: GO:0000086
data:
  {"annotated_genes":["SJAG_03592","SJAG_05373","SJAG_00600","SJAG_03073","SJAG_01456","SJAG_03048","SJAG_01146","SJAG_01118","SJAG_06592","SJAG_00082","SJAG_03942","SJAG_03486","SJAG_02576","SJAG_02858","SJAG_04140","SJAG_00883","SJAG_02563","SJAG_02098","SJAG_02771","SJAG_01084","SJAG_01010","SJAG_02074","SJAG_02342","SJAG_02266","SJAG_02592","SJAG_03067","SJAG_02723","SJAG_03602","SJAG_00640","SJAG_04486","SJAG_04394","SJAG_02392","SJAG_01680","SJAG_01044","SJAG_00216","SJAG_04597","SJAG_03160","SJAG_03026","SJAG_03695","SJAG_01855","SJAG_04280","SJAG_04287","SJAG_02332","SJAG_00526","SJAG_01205","SJAG_04671","SJAG_01000","SJAG_00214","SJAG_00117","SJAG_01076","SJAG_01805","SJAG_00318","SJAG_00256","SJAG_03126","SJAG_03927","SJAG_01605","SJAG_01901","SJAG_00364","SJAG_01837","SJAG_03854","SJAG_01873","SJAG_04332","SJAG_01429","SJAG_03309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98497,107559],"is_not":false,"summary":null,"term":"GO:0000086"},{"annotations":[90547,96666,112134,86148,97565],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0044878"},{"annotations":[90077,102740,112193,108164,112935,95490,99460,88655,90099,113225,103964,85279,113395,95324,105447,87567,96667],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033314"},{"annotations":[112136,91990,90678,94573],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031569"},{"annotations":[96668,113823,90079,87926,97184,105448,85280,102741,110391,95491,84718,87568,107858,113144,86364],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0007095"},{"annotations":[89337,112137,110597,110392,107561,107691,103138,86149,97128,102774,91992,90507,89049,107952,100625,104701,108612,89696],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010972"},{"annotations":[89937,95131,94574,107328,112809,84229,87866,99630,84220,92467,97893,88269,90549,103361,112620,90510,90680,104703,106472],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010971"},{"annotations":[97516,84026],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905287"},{"annotations":[98529,107330,108095],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010389"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle transition by which a cell in G2 commits to M phase. The process begins when the kinase activity of M cyclin/CDK complex reaches a threshold high enough for the cell cycle to proceed. This is accomplished by activating a positive feedback loop that results in the accumulation of unphosphorylated and active M cyclin/CDK complex.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle phase transition","termid":"GO:0044772"},{"relation_name":"is_a","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01456":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_01901":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02342":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04486":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044772","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"G2/M transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic G2/M transition","type":"exact"}],"termid":"GO:0000086","terms_by_termid":{"GO:0000086":null,"GO:0007095":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0044878":null,"GO:1905287":null}}


id: PBO:0050973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 18","termid":"PBO:0050973"}


id: PR:O74968
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp102 gene.","definition_xrefs":["UniProtKB:O74968","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 small nuclear ribonucleoprotein usp102 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.07c","synonyms":[{"name":"Spom972h-usp102","type":"exact"},{"name":"U1 snRNP protein usp102 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74968"}


id: GO:0033347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a tetrose, any monosaccharide with a chain of four carbon atoms in the molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tetrose metabolic process","synonyms":[{"name":"tetrose metabolism","type":"exact"}],"termid":"GO:0033347"}


id: PBO:0045366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 2","termid":"PBO:0045366"}


id: GO:0047266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: poly(ribitol phosphate) + UDP-D-glucose = beta-D-glucosylpoly(ribitol phosphate) + UDP.","definition_xrefs":["EC:2.4.1.53","MetaCyc:2.4.1.53-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"poly(ribitol-phosphate) beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-18017","RHEA:10068"],"synonyms":[{"name":"UDP glucose-poly(ribitol-phosphate) beta-glucosyltransferase activity","type":"related"},{"name":"UDP-D-glucose polyribitol phosphate glucosyl transferase activity","type":"related"},{"name":"UDP-D-glucose:polyribitol phosphate glucosyl transferase activity","type":"related"},{"name":"UDP-glucose:poly(ribitol-phosphate) beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:poly(ribitol-phosphate) beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-poly(ribitol-phosphate) beta-glucosyltransferase activity","type":"related"}],"termid":"GO:0047266"}


id: PBO:0081976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZSCAN2 antisense RNA 1","termid":"PBO:0081976"}


id: CHEBI:16238
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD","termid":"CHEBI:16238"}


id: GO:0015706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nitrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"},{"relation_name":"is_a","term_name":"nitrate import","termid":"GO:1902025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"nitrate transmembrane transport","secondary_identifiers":["GO:0006872","GO:0080055"],"synonyms":[{"name":"low affinity nitrate transport","type":"narrow"},{"name":"low-affinity nitrate transport","type":"narrow"},{"name":"nitrate transport","type":"broad"}],"termid":"GO:0015706"}


id: PBO:0075628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow of prion protein pseudogene 1","termid":"PBO:0075628"}


id: PBO:0056202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A10","termid":"PBO:0056202"}


id: PBO:0079944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USH1 protein network component harmonin binding protein 1","termid":"PBO:0079944"}


id: PBO:0067792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 94","termid":"PBO:0067792"}


id: GO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G-quadruplex RNA structure, in which groups of four guanines adopt a flat, cyclic hydrogen-bonding arrangement known as a guanine tetrad.","definition_xrefs":["PMID:19330720","PMID:18294969","PMID:18568163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"G-quadruplex RNA binding","secondary_identifiers":["Reactome:R-HSA-9836998"],"synonyms":[{"name":"G quadruplex binding","type":"exact"},{"name":"G quartet RNA binding","type":"exact"},{"name":"G quartet binding","type":"broad"},{"name":"G-quartet binding","type":"broad"}],"termid":"GO:0002151"}


id: PBO:0045047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-acetyltransferase","termid":"PBO:0045047"}


id: PBO:0088299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4646 family conserved fungal protein","termid":"PBO:0088299"}


id: PBO:0112266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assigned_by","termid":"PBO:0112266"}


id: PBO:0076726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1 family AKT coactivator B","termid":"PBO:0076726"}


id: GO:0044764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that is carried out at the cellular level which involves another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cellular process (obsolete GO:0044764)","termid":"GO:0044764"}


id: GO:0071228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tumor cell","termid":"GO:0071228"}


id: GO:1905335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aggrephagy.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:25686248","GO_REF:0000058","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"regulates","term_name":"aggrephagy","termid":"GO:0035973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of aggrephagy","termid":"GO:1905335"}


id: PBO:0044017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 1","termid":"PBO:0044017"}


id: GO:1904704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:bc","GOC:aruk","GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:26412237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell-cell junction","termid":"GO:0150107"},{"relation_name":"is_a","term_name":"regulation of protein localization to adherens junction","termid":"GO:1904702"},{"relation_name":"positively_regulates","term_name":"protein localization to adherens junction","termid":"GO:0071896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to adherens junction","synonyms":[{"name":"activation of protein localisation in cell-cell adherens junction","type":"narrow"},{"name":"activation of protein localisation to cell-cell adherens junction","type":"narrow"},{"name":"activation of protein localization in cell-cell adherens junction","type":"narrow"},{"name":"activation of protein localization to cell-cell adherens junction","type":"narrow"},{"name":"positive regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"positive regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"positive regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localization to cell-cell adherens junction","type":"exact"}],"termid":"GO:1904704"}


id: PBO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxoadipate and 2-oxoglutarate transporter (predicted)","termid":"PBO:0002078"}


id: PBO:0082722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the polarisome; functions in actin cytoskeletal organization during polarized growth; acts as a scaffold for Mkk1p and Mpk1p cell wall integrity signaling components; potential Cdc28p substrate; coding sequence contains length polymorphisms in different strains; SPA2 has a paralog, SPH1, that arose from the whole genome duplication","termid":"PBO:0082722"}


id: PBO:0071301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 24","termid":"PBO:0071301"}


id: PBO:0071018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 20","termid":"PBO:0071018"}


id: GO:1902688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of NAD metabolic process.","definition_xrefs":["PMID:19846558","GOC:di","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"regulates","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"regulation of NAD metabolic process","synonyms":[{"name":"regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"regulation of NAD metabolism","type":"exact"},{"name":"regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"regulation of oxidized NAD metabolic process","type":"exact"},{"name":"regulation of oxidized NAD metabolism","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:1902688"}


id: PBO:0084428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major stress-induced structural GPI-cell wall glycoprotein; associates with translating ribosomes, possible role in mitochondrial genome maintenance; ORF contains two distinct variable minisatellites; SED1 has a paralog, SPI1, that arose from the whole genome duplication","termid":"PBO:0084428"}


id: GO:1903197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-dopa biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie","PMID:16731528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of L-dopa biosynthetic process","termid":"GO:1903195"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"L-dopa biosynthetic process","termid":"GO:1903185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of L-dopa biosynthetic process","synonyms":[{"name":"activation of L-dopa anabolism","type":"narrow"},{"name":"activation of L-dopa biosynthesis","type":"narrow"},{"name":"activation of L-dopa biosynthetic process","type":"narrow"},{"name":"activation of L-dopa formation","type":"narrow"},{"name":"activation of L-dopa synthesis","type":"narrow"},{"name":"positive regulation of L-dopa anabolism","type":"exact"},{"name":"positive regulation of L-dopa biosynthesis","type":"exact"},{"name":"positive regulation of L-dopa formation","type":"exact"},{"name":"positive regulation of L-dopa synthesis","type":"exact"},{"name":"up regulation of L-dopa anabolism","type":"exact"},{"name":"up regulation of L-dopa biosynthesis","type":"exact"},{"name":"up regulation of L-dopa biosynthetic process","type":"exact"},{"name":"up regulation of L-dopa formation","type":"exact"},{"name":"up regulation of L-dopa synthesis","type":"exact"},{"name":"up-regulation of L-dopa anabolism","type":"exact"},{"name":"up-regulation of L-dopa biosynthesis","type":"exact"},{"name":"up-regulation of L-dopa biosynthetic process","type":"exact"},{"name":"up-regulation of L-dopa formation","type":"exact"},{"name":"up-regulation of L-dopa synthesis","type":"exact"},{"name":"upregulation of L-dopa anabolism","type":"exact"},{"name":"upregulation of L-dopa biosynthesis","type":"exact"},{"name":"upregulation of L-dopa biosynthetic process","type":"exact"},{"name":"upregulation of L-dopa formation","type":"exact"},{"name":"upregulation of L-dopa synthesis","type":"exact"}],"termid":"GO:1903197"}


id: GO:1904525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA amplification.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26195783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA amplification","termid":"GO:1904523"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"},{"relation_name":"positively_regulates","term_name":"DNA amplification","termid":"GO:0006277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA amplification","synonyms":[{"name":"activation of DNA amplification","type":"narrow"},{"name":"up regulation of DNA amplification","type":"exact"},{"name":"up-regulation of DNA amplification","type":"exact"},{"name":"upregulation of DNA amplification","type":"exact"}],"termid":"GO:1904525"}


id: GO:0006495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete terminal O-glycosylation (obsolete GO:0006495)","synonyms":[{"name":"terminal O-glycosylation","type":"exact"}],"termid":"GO:0006495"}


id: GO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner layer of a double or triple concentric icosahedral capsid. Inner capsids are part of reoviridae and cystoviridae virions.","definition_xrefs":["UniProtKB-KW:KW-1153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral inner capsid","synonyms":[{"name":"inner capsid","type":"exact"}],"termid":"GO:0039625"}


id: PBO:0083979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosyl hydrolase required for beta-1,6-glucan biosynthesis; type II integral membrane protein that localizes to ER, plasma membrane, sites of polarized growth and secretory vesicles; functionally redundant with Skn1p; KRE6 has a paralog, SKN1, that arose from the whole genome duplication","termid":"PBO:0083979"}


id: GO:0033579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a galactose unit to a protein amino acid in the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein galactosylation in endoplasmic reticulum (obsolete GO:0033579)","synonyms":[{"name":"protein amino acid galactosylation in ER","type":"exact"},{"name":"protein amino acid galactosylation in endoplasmic reticulum","type":"exact"}],"termid":"GO:0033579"}


id: PBO:0027709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_DNA-directed_DNA_polymerase_activity","termid":"PBO:0027709"}


id: PBO:0086904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative type-1 protein phosphatase targeting subunit; tethers Glc7p type-1 protein phosphatase to Gsy2p glycogen synthase; PIG2 has a paralog, GIP2, that arose from the whole genome duplication","termid":"PBO:0086904"}


id: PBO:0051643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 2","termid":"PBO:0051643"}


id: PBO:0046985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member J, pseudogene","termid":"PBO:0046985"}


id: PBO:0071200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 41","termid":"PBO:0071200"}


id: PBO:0048293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase","termid":"PBO:0048293"}


id: PBO:0054780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2193","termid":"PBO:0054780"}


id: PBO:0012014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, coatamer related complex subunit Sea3 (predicted)","termid":"PBO:0012014"}


id: PBO:0054346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1739","termid":"PBO:0054346"}


id: PBO:0088985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF Vps domain, PX domain","termid":"PBO:0088985"}


id: GO:0090164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The asymmetric formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae that contributes to the establishment of epithelial cell polarity.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi ribbon formation","termid":"GO:0090161"},{"relation_name":"part_of","term_name":"establishment of epithelial cell polarity","termid":"GO:0090162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"asymmetric Golgi ribbon formation","termid":"GO:0090164"}


id: PBO:0050436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein L like","termid":"PBO:0050436"}


id: PBO:0018097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorein homolog Vps1302 (predicted)","termid":"PBO:0018097"}


id: GO:0015304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) = glucose(in).","definition_xrefs":["TC:2.A.1.1.12","TC:2.A.1.1.6","TC:2.A.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose transmembrane transporter activity","termid":"GO:0005355"},{"relation_name":"is_a","term_name":"hexose uniporter activity","termid":"GO:0008516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glucose uniporter activity","secondary_identifiers":["RHEA:60376"],"synonyms":[{"name":"galactose, glucose uniporter activity","type":"narrow"}],"termid":"GO:0015304"}


id: PBO:0065142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin releasing hormone","termid":"PBO:0065142"}


id: GO:0015443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out).","definition_xrefs":["EC:3.6.3.15"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium-transporting two-sector ATPase activity (obsolete GO:0015443)","synonyms":[{"name":"sodium-transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:0015443"}


id: _global:assayed_region
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and the region of the genome in which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_region","termid":"_global:assayed_region"}


id: PBO:0110387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL antisense RNA 1","termid":"PBO:0110387"}


id: GO:0060891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a limb epidermal granular cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratinocyte differentiation","termid":"GO:0030216"},{"relation_name":"part_of","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb granular cell differentiation","termid":"GO:0060891"}


id: GO:0001989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as part of the baroreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0721643949"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of the force of heart contraction involved in baroreceptor response to decreased systemic arterial blood pressure (obsolete GO:0001989)","synonyms":[{"name":"increased force of heart contraction during baroreceptor response to decreased systemic arterial blood pressure","type":"related"},{"name":"increased strength of cardiac contraction during baroreceptor response to decreased blood pressure","type":"related"},{"name":"positive regulation of the force of heart contraction during baroreceptor response to decreased systemic arterial blood pressure","type":"related"}],"termid":"GO:0001989"}


id: GO:0075268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive fruiting body development","termid":"GO:0031155"},{"relation_name":"regulates","term_name":"aecium development","termid":"GO:0075267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aecium development","termid":"GO:0075268"}


id: FYPO:0001646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of glutamate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal glutamate import","synonyms":[{"name":"abnormal L-glutamate import","type":"exact"},{"name":"abnormal L-glutamate import across plasma membrane","type":"exact"},{"name":"abnormal glutamate import into cell","type":"exact"},{"name":"abnormal glutamate uptake","type":"exact"}],"termid":"FYPO:0001646"}


id: GO:0030708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a single follicular epithelium around the germ-line derived cells of a cyst formed in the germarium. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11591336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female germ-line cyst encapsulation","termid":"GO:0048139"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived female germ-line cyst encapsulation","termid":"GO:0030708"}


id: GO:0019229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"},{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"regulates","term_name":"vasoconstriction","termid":"GO:0042310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction","termid":"GO:0019229"}


id: PBO:0047837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box R2","termid":"PBO:0047837"}


id: PBO:0018057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine) methyltransferase Trm140 (predicted)","termid":"PBO:0018057"}


id: PBO:0053634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINC00680-GUSBP4 readthrough, transcribed pseudogene","termid":"PBO:0053634"}


id: PBO:0038909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E4, pseudogene","termid":"PBO:0038909"}


id: PBO:0047142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 177 member A1 pseudogene 1","termid":"PBO:0047142"}


id: PBO:0053434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 379","termid":"PBO:0053434"}


id: GO:0043781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cobalt-factor II = S-adenosyl-L-homocysteine + cobalt-factor III.","definition_xrefs":["EC:2.1.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cobalt-factor II C20-methyltransferase activity","secondary_identifiers":["RHEA:17997","MetaCyc:RXN-8760"],"synonyms":[{"name":"CbiL","type":"narrow"},{"name":"S-adenosyl-L-methionine:cobalt-factor-II C20-methyltransferase activity","type":"related"},{"name":"cobalt-factor II C20 methyltransferase activity","type":"exact"},{"name":"cobalt-precorrin-2 C(20)-methyltransferase activity","type":"related"}],"termid":"GO:0043781"}


id: FYPO:0000736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long spindle","termid":"FYPO:0000730"},{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0000120"],"is_obsolete":false,"name":"long meiotic spindle","synonyms":[{"name":"elongated meiotic spindle","type":"exact"},{"name":"increased meiotic spindle length","type":"exact"},{"name":"long meiotic spindles","type":"exact"}],"termid":"FYPO:0000736"}


id: PR:P36621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylyl cyclase-associated protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyl cyclase-associated protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.09c","secondary_identifiers":["UniProtKB:P36621"],"synonyms":[{"name":"CAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC306.09c","type":"related"},{"name":"Spom972h-CAP2","type":"exact"},{"name":"cap","type":"related"}],"termid":"PR:P36621"}


id: FYPO:0000697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"}


id: PBO:0078504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tribbles pseudokinase 1","termid":"PBO:0078504"}


id: FYPO:0002622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of malate dehydrogenase (decarboxylating) (NAD+) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","termid":"FYPO:0002621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"decreased 'malic' enzyme activity","type":"related"},{"name":"decreased (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"decreased NAD-linked malic enzyme activity","type":"related"},{"name":"decreased NAD-malic enzyme activity","type":"broad"},{"name":"decreased NAD-specific malic enzyme activity","type":"related"},{"name":"decreased malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"reduced malate dehydrogenase (decarboxylating) (NAD+) activity","type":"exact"}],"termid":"FYPO:0002622"}


id: PBO:0012236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A Ppa1","termid":"PBO:0012236"}


id: PBO:0089187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 1","termid":"PBO:0089187"}


id: FYPO:0007782
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02576:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02576","name":"rad25delta","uniquename":"SJAG_02576:allele-1"},"SJAG_02771:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02771","name":"rad1delta","uniquename":"SJAG_02771:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115220,115224,115605,115606,115607,115608,115609,115610,115612,115613],"is_not":false,"summary":null,"term":"FYPO:0007782"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the transition from yeast-form to hyphal growth does not occur under conditions that normally induce it.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_01205":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_02266":null,"SJAG_02576":null,"SJAG_02771":null},"genotype_count":8,"genotypes_by_uniquename":{"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"rad1delta":{"display_name":"rad1delta","display_uniquename":"rad1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02771:allele-1","expression":"Null"}]}]},"rad24delta":{"display_name":"rad24delta","display_uniquename":"rad24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02266:allele-1","expression":"Null"}]}]},"rad25delta":{"display_name":"rad25delta","display_uniquename":"rad25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02576:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"name":"abolished hyphal transition","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_02771","SJAG_00429","SJAG_02576","SJAG_00364","SJAG_01605","SJAG_01680","SJAG_02266","SJAG_01205"],"single_locus_genotype_uniquenames":["rad26delta","rad25delta","crb2delta","chk1delta","rad3delta","rad1delta","rad24delta","rad9delta"],"synonyms":[{"name":"abolished transition to hyphal growth","type":"exact"},{"name":"hyphal transition abolished","type":"exact"}],"termid":"FYPO:0007782","terms_by_termid":{"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007782":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0034903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: endosulfan ether + O2 + 2 H+ + 2 e- = endosulfan hydroxyether + H2O.","definition_xrefs":["UM-BBD_reactionID:r1413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"endosulfan ether monooxygenase activity","termid":"GO:0034903"}


id: PBO:0080406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 36 homolog","termid":"PBO:0080406"}


id: GO:0003950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.","definition_xrefs":["EC:2.4.2.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"NAD+ ADP-ribosyltransferase activity","secondary_identifiers":["MetaCyc:NAD+-ADP-RIBOSYLTRANSFERASE-RXN","Reactome:R-HSA-3640858","Reactome:R-HSA-5688276","Reactome:R-HSA-8948800","Reactome:R-HSA-8938073","Reactome:R-HSA-2187325","Reactome:R-HSA-5651723","Reactome:R-HSA-5687653","Reactome:R-HSA-9686061","Reactome:R-HSA-9729279"],"synonyms":[{"name":"ADP-ribosyltransferase (polymerizing) activity","type":"related"},{"name":"NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"related"},{"name":"poly(ADP-ribose) synthase activity","type":"related"},{"name":"poly(ADP-ribose) synthetase activity","type":"related"},{"name":"poly(ADP-ribose)polymerase activity","type":"related"},{"name":"poly(adenosine diphosphate ribose) polymerase activity","type":"related"}],"termid":"GO:0003950"}


id: GO:1904710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of granulosa cell apoptotic process.","definition_xrefs":["PMID:19208546","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of granulosa cell apoptotic process","termid":"GO:1904708"},{"relation_name":"positively_regulates","term_name":"granulosa cell apoptotic process","termid":"GO:1904700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of granulosa cell apoptotic process","synonyms":[{"name":"activation of granulosa cell apoptosis","type":"narrow"},{"name":"activation of granulosa cell apoptotic process","type":"narrow"},{"name":"activation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"activation of granulosa cell of ovary apoptotic process","type":"narrow"},{"name":"positive regulation of granulosa cell apoptosis","type":"narrow"},{"name":"positive regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"positive regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"up regulation of granulosa cell apoptosis","type":"narrow"},{"name":"up regulation of granulosa cell apoptotic process","type":"exact"},{"name":"up regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"up regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"up-regulation of granulosa cell apoptosis","type":"narrow"},{"name":"up-regulation of granulosa cell apoptotic process","type":"exact"},{"name":"up-regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"up-regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"upregulation of granulosa cell apoptosis","type":"narrow"},{"name":"upregulation of granulosa cell apoptotic process","type":"exact"},{"name":"upregulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"upregulation of granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904710"}


id: PBO:0041581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 23","termid":"PBO:0041581"}


id: GO:0072329
data:
  {"annotated_genes":["SJAG_04570","SJAG_00706","SJAG_03852","SJAG_00281","SJAG_00413","SJAG_01432","SJAG_03804","SJAG_00633","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107704,94325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046177"},{"annotations":[107963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[102650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[87595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[101203,97162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[107898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[109896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_00413":null,"SJAG_00633":null,"SJAG_00706":null,"SJAG_01432":null,"SJAG_02763":null,"SJAG_03804":null,"SJAG_03852":null,"SJAG_04570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"monocarboxylic acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072329","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0009062":null,"GO:0009436":null,"GO:0042758":null,"GO:0046177":null,"GO:1903457":null}}


id: GO:0061314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell and contributing to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling involved in heart development","synonyms":[{"name":"Notch signalling involved in heart development","type":"exact"}],"termid":"GO:0061314"}


id: PBO:0070069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 26, pseudogene","termid":"PBO:0070069"}


id: GO:0052572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to host defenses","termid":"GO:0052200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host immune response","secondary_identifiers":["GO:0052564"],"synonyms":[{"name":"response to immune response of other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052572"}


id: PBO:0076764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 1","termid":"PBO:0076764"}


id: PBO:0110115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Ras-interacting protein with DIL domain, human RADIL and RASIP1 ortholog (predicted), implicated in cytoskeleton organization","termid":"PBO:0110115"}


id: PBO:0078272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 8-1","termid":"PBO:0078272"}


id: SO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An indel that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indel_artifact","synonyms":[{"name":"indel artifact","type":"exact"}],"termid":"SO:0002173"}


id: PBO:0043997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic somatomammotropin hormone 2","termid":"PBO:0043997"}


id: GO:0051403
data:
  {"annotated_genes":["SJAG_05000","SJAG_03753","SJAG_03263","SJAG_04825","SJAG_04522","SJAG_01114","SJAG_04503","SJAG_02392","SJAG_01181","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96102],"is_not":false,"summary":null,"term":"GO:0051403"},{"annotations":[88394,107107,98279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000196"},{"annotations":[99943,91991,114418,95574,103171,103739],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"A MAPK cascade that starts with the activation of a stress-activated MAP kinase cascade.","definition_xrefs":["GOC:ai","PMID:15936270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAPK cascade","termid":"GO:0000165"},{"relation_name":"is_a","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_01181":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_03753":null,"SJAG_04503":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"stress-activated MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAPK11 cascade","type":"narrow"},{"name":"MAPK12 cascade","type":"narrow"},{"name":"MAPK13 cascade","type":"narrow"},{"name":"MAPK14 cascade","type":"related"},{"name":"SAPK cascade","type":"broad"},{"name":"stress-activated MAPK signaling pathway","type":"exact"},{"name":"stress-activated MAPK signalling pathway","type":"exact"},{"name":"stress-activated MAPKKK cascade","type":"exact"},{"name":"stress-activated MAPKKK signaling pathway","type":"exact"},{"name":"stress-activated MAPKKK signalling pathway","type":"exact"}],"termid":"GO:0051403","terms_by_termid":{"GO:0000196":null,"GO:0051403":null,"GO:1903138":null}}


id: MOD:01477
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to an 3'-fluoro-L-fluorophenylalanine.","definition_xrefs":["PubMed:8172898","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-phenylalanine","termid":"MOD:01227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-fluoro-L-phenylalanine","synonyms":[{"name":"3-fluorophenylalanine","type":"exact"},{"name":"m-fluorophenylalanine","type":"exact"},{"name":"meta-fluorophenylalanine","type":"exact"}],"termid":"MOD:01477"}


id: PBO:0051300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-37 (non-functional)","termid":"PBO:0051300"}


id: GO:0072065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the long descending thin limb bend over time, from its formation to the mature structure. The long descending thin limb bend is a part of the descending thin limb of a long nephron that lies beyond the prebend segment.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"long descending thin limb development","termid":"GO:0072064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long descending thin limb bend development","termid":"GO:0072065"}


id: PBO:0084108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDEL receptor; an integral membrane protein that binds to the HDEL motif in proteins destined for retention in the endoplasmic reticulum; has a role in maintenance of normal levels of ER-resident proteins","termid":"PBO:0084108"}


id: PBO:0038690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 1","termid":"PBO:0038690"}


id: PBO:0062123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 1","termid":"PBO:0062123"}


id: GO:0034073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: squalene = tetrahymanol.","definition_xrefs":["GOC:cb","PMID:18033581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squalene cyclase activity","termid":"GO:0034072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003824","GO:0009975","GO:0003674"],"is_obsolete":false,"name":"tetrahymanol cyclase activity","termid":"GO:0034073"}


id: GO:0039713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular compartment in a host cell which increases the efficiency of viral replication, and shields the virus from host defenses. Viral factories can be either cytoplasmic or nuclear and often arise from extensive rearrangement of host cell cytoskeletal and/or cell membrane compartments.","definition_xrefs":["VZ:1951","PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral factory","synonyms":[{"name":"virus factory","type":"exact"}],"termid":"GO:0039713"}


id: PBO:0031161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_threonine_import","termid":"PBO:0031161"}


id: GO:0050584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linoleate + O2 = (9Z,11S,12Z)-11-hydroperoxyoctadeca-9,12-dienoate.","definition_xrefs":["RHEA:18993","EC:1.13.11.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"linoleate 11-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R05718","MetaCyc:1.13.11.45-RXN"],"synonyms":[{"name":"linoleate dioxygenase activity","type":"related"},{"name":"linoleate:oxygen 11S-oxidoreductase activity","type":"related"},{"name":"manganese lipoxygenase activity","type":"related"}],"termid":"GO:0050584"}


id: GO:0032131
data:
  {"annotated_genes":["SJAG_04778","SJAG_05257","SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97707,103193],"is_not":false,"summary":null,"term":"GO:0032131"},{"annotations":[84348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032132"}]},"cv_name":"molecular_function","definition":"Binding to an alkylated residue in DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damaged DNA binding","termid":"GO:0003684"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_04778":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"alkylated DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032131","terms_by_termid":{"GO:0032131":null,"GO:0032132":null}}


id: FYPO:0002780
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell is lower than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular reactive oxygen species level","termid":"FYPO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular reactive oxygen species level during vegetative growth","synonyms":[{"name":"decreased ROS accumulation during vegetative growth","type":"related"},{"name":"decreased cellular ROS accumulation during vegetative growth","type":"related"},{"name":"decreased cellular ROS level during vegetative growth","type":"exact"},{"name":"decreased cellular reactive oxygen species accumulation during vegetative growth","type":"related"},{"name":"decreased cellular reactive oxygen species level during mitotic cell cycle","type":"related"},{"name":"reduced cellular ROS level during vegetative growth","type":"exact"},{"name":"reduced cellular reactive oxygen species level during vegetative growth","type":"exact"}],"termid":"FYPO:0002780"}


id: FYPO:0004619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable cytoplasmic microtubules nucleated from the equatorial microtubule organizing center (eMTOC).","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubules absent from cell","termid":"FYPO:0004702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002399","FYPO:0005447","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"cytoplasmic microtubules nucleated from eMTOC absent from cell","synonyms":[{"name":"cytoplasmic microtubules nucleated from eMTOC absent from cell during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules nucleated from eMTOC absent from cell during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules nucleated from equatorial microtubule organizing center absent from cell","type":"exact"}],"termid":"FYPO:0004619"}


id: PBO:0004795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidyl transferase Rev1 (predicted)","termid":"PBO:0004795"}


id: MOD:00605
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative, C-Terminal/Glutamate/Aspartate sulfonation","definition_xrefs":["Unimod:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:00605"}


id: GO:0010119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stomatal movement.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomatal movement","termid":"GO:0010119"}


id: GO:0038159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a the C-X-C chemokine type 4 receptor on the surface of a cell binding to one of it's physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"C-X-C chemokine receptor CXCR4 signaling pathway","synonyms":[{"name":"CXCR4 signaling pathway","type":"exact"}],"termid":"GO:0038159"}


id: PBO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin","termid":"PBO:0002496"}


id: SO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant that is located within the UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_variant","termid":"SO:0001791"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_variant","synonyms":[{"name":"UTR variant","type":"exact"},{"name":"UTR_","type":"exact"}],"termid":"SO:0001622"}


id: PBO:0062304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 1 pseudogene","termid":"PBO:0062304"}


id: PBO:0091880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA nam3","termid":"PBO:0091880"}


id: PBO:0069443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 708, pseudogene","termid":"PBO:0069443"}


id: FYPO:0005003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the composition of a protein complex differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein complex composition","synonyms":[{"name":"abnormal protein complex stoichiometry","type":"exact"},{"name":"abnormal protein-containing complex composition","type":"exact"}],"termid":"FYPO:0005003"}


id: PBO:0081399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 239","termid":"PBO:0081399"}


id: PBO:0004152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1-UNC-like protein involved protein folding in the ER (predicted)","termid":"PBO:0004152"}


id: PBO:0074918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 88B","termid":"PBO:0074918"}


id: PBO:0067659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 836, pseudogene","termid":"PBO:0067659"}


id: PBO:0002526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B box","termid":"PBO:0002526"}


id: PBO:0090328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydrolase-like, human TSTD2 and OVCA2 ortholog, unknown biological role, implicated in co-factor metabolism","termid":"PBO:0090328"}


id: GO:0021902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neuronal precursor cells to become specialized types of neurons in the forebrain.","definition_xrefs":["GOC:dph","PMID:16226447","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron fate commitment","termid":"GO:0021877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"commitment of neuronal cell to specific neuron type in forebrain","termid":"GO:0021902"}


id: PBO:0081031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11C","termid":"PBO:0081031"}


id: GO:0090244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state that contributes to somitogenesis.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway","termid":"GO:0016055"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Wnt signaling pathway involved in somitogenesis","synonyms":[{"name":"Wnt receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"Wnt receptor signalling","type":"exact"},{"name":"Wnt-activated signaling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:0090244"}


id: PBO:0073520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding protein 2","termid":"PBO:0073520"}


id: GO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate = 3-phosphonopyruvate.","definition_xrefs":["RHEA:17013","EC:5.4.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate mutase activity","secondary_identifiers":["MetaCyc:PHOSPHOENOLPYRUVATE-MUTASE-RXN","KEGG_REACTION:R00661"],"synonyms":[{"name":"PEP mutase activity","type":"related"},{"name":"PEP phosphomutase activity","type":"related"},{"name":"PEPPM","type":"related"},{"name":"phosphoenolpyruvate 2,3-phosphonomutase activity","type":"related"},{"name":"phosphoenolpyruvate phosphomutase activity","type":"related"},{"name":"phosphoenolpyruvate-phosphonopyruvate phosphomutase activity","type":"related"}],"termid":"GO:0050188"}


id: PBO:0004997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35","termid":"PBO:0004997"}


id: PBO:0060661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-protein coding RNA, upstream of F2R/PAR1","termid":"PBO:0060661"}


id: GO:0141123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of the skin of another organism, leading to damage or temporary subversion of the skin.","definition_xrefs":["PMID:28194160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of tissue in another organism","termid":"GO:0141062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermonecrosis in another organism","termid":"GO:0141123"}


id: GO:0033790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxymethylfurfural + NAD(P)H + H+ = 2,5-bis-hydroxymethylfuran + NAD(P)+.","definition_xrefs":["GOC:jp","PMID:15338422","GOC:mah","PMID:16652391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylfurfural reductase activity","termid":"GO:0033790"}


id: PR:P62505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P62505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.16","synonyms":[{"name":"Spom972h-dad3","type":"exact"},{"name":"outer kinetochore protein dad3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P62505"}


id: GO:0071712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation.","definition_xrefs":["PMID:14607247","PMID:19520858"],"gene_count":0,"genotype_count":0,"name":"obsolete ER-associated misfolded protein catabolic process (obsolete GO:0071712)","synonyms":[{"name":"endoplasmic reticulum-associated misfolded protein catabolism","type":"exact"}],"termid":"GO:0071712"}


id: PBO:0080512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP actin nucleation promoting factor","termid":"PBO:0080512"}


id: PBO:0070945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a","termid":"PBO:0070945"}


id: GO:0001698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid induced by the interaction of gastrin with its receptor.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}


id: PBO:0004910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein (predicted)","termid":"PBO:0004910"}


id: PR:O14114
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C31G5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.19","synonyms":[{"name":"Spom972h-abo1","type":"exact"}],"termid":"PR:O14114"}


id: GO:0061986
data:
  {"annotated_genes":["SJAG_03473","SJAG_03911"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71044,102369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"}]},"cv_name":"biological_process","definition":"Any process involving glucose that decreases the frequency, rate or extent or transcription.","definition_xrefs":["PMID:11875061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by glucose","termid":"GO:0046015"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03473":null,"SJAG_03911":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription by glucose","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061986","terms_by_termid":{"GO:0000433":null}}


id: FYECO:0000326
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 4-nitroquinoline N-oxide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 4-NQO","synonyms":[{"name":"+ 4-nitroquinoline N-oxide","type":"exact"},{"name":"+ 4NQO","type":"exact"}],"termid":"FYECO:0000326"}


id: FYPO:0007596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitophagy","termid":"FYPO:0000500"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitophagy during nitrogen starvation","synonyms":[{"name":"decreased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"reduced autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007596"}


id: GO:0061499
data:
  {"annotated_genes":["SJAG_02737","SJAG_01215","SJAG_01188","SJAG_01464"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103220,104976,111590,113067],"is_not":false,"summary":null,"term":"GO:0061499"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the outer plaque is in the cytoplasm.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer plaque of spindle pole body","termid":"GO:0005824"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01188":null,"SJAG_01215":null,"SJAG_01464":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"outer plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061499","terms_by_termid":{"GO:0061499":null}}


id: PBO:0048866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 11","termid":"PBO:0048866"}


id: GO:0032060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a bleb, a cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Plasma membrane blebbing occurs during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","PMID:12083798","PMID:16624291","Wikipedia:Bleb_(cell_biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"bleb assembly","synonyms":[{"name":"blebbing","type":"broad"},{"name":"cell blebbing","type":"exact"},{"name":"membrane blebbing","type":"broad"},{"name":"plasma membrane bleb assembly","type":"exact"},{"name":"plasma membrane blebbing","type":"exact"}],"termid":"GO:0032060"}


id: GO:0015291
data:
  {"annotated_genes":["SJAG_04673","SJAG_01183","SJAG_03820","SJAG_03606","SJAG_01960","SJAG_02463","SJAG_04406","SJAG_04241","SJAG_02958","SJAG_00275","SJAG_01145","SJAG_01541","SJAG_04714","SJAG_00339","SJAG_01872","SJAG_00612","SJAG_04096","SJAG_04905","SJAG_00547","SJAG_03595","SJAG_01059","SJAG_02780","SJAG_02050","SJAG_04698","SJAG_02779","SJAG_03608","SJAG_03960","SJAG_03951","SJAG_01406","SJAG_03401","SJAG_04028","SJAG_00276","SJAG_01033","SJAG_00057","SJAG_04506","SJAG_04616","SJAG_04068","SJAG_00233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108392,92634,113149,85142,89234,89465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015297"},{"annotations":[107027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[86849,111685,87338,94469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[88619,106783,110300,110307,99118,113328,72181,75253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[87914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[113332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[96811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[97794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[91912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[87339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[94192,88699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[99924,108860,100743,112642,111919,105835,90180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005315"},{"annotations":[101820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[85474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[106255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"},{"annotations":[85475,92883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"},{"annotations":[107096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005452"},{"annotations":[88192,88198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[97797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[91913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[108399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"},{"annotations":[91682,84619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy, not direct ATP coupling. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729","PMID:10839820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_00233":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00339":null,"SJAG_00547":null,"SJAG_00612":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01406":null,"SJAG_01541":null,"SJAG_01872":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03401":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03951":null,"SJAG_03960":null,"SJAG_04028":null,"SJAG_04068":null,"SJAG_04096":null,"SJAG_04241":null,"SJAG_04406":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04673":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015353","GO:0015290","GO:0015404","GO:0015570","TC:2.A"],"synonyms":[{"name":"active transporter","type":"broad"},{"name":"coupled carrier","type":"exact"},{"name":"electrochemical potential-driven transporter activity","type":"exact"},{"name":"energizer of outer membrane receptor-mediated transport activity","type":"narrow"},{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"},{"name":"heavy metal ion porter activity","type":"narrow"},{"name":"ion-gradient-driven energizer activity","type":"narrow"},{"name":"multidrug endosomal transmembrane transporter activity","type":"narrow"},{"name":"nitrite/nitrate porter activity","type":"narrow"},{"name":"porter activity","type":"exact"},{"name":"porters","type":"exact"},{"name":"secondary carrier-type facilitators","type":"exact"}],"termid":"GO:0015291","terms_by_termid":{"GO:0005315":null,"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0005371":null,"GO:0005452":null,"GO:0005471":null,"GO:0008271":null,"GO:0008506":null,"GO:0010486":null,"GO:0015295":null,"GO:0015297":null,"GO:0015366":null,"GO:0015369":null,"GO:0015379":null,"GO:0015385":null,"GO:0015386":null,"GO:0015505":null,"GO:0034216":null,"GO:0071913":null,"GO:0097434":null,"GO:0140987":null}}


id: GO:0035430
data:
  {"annotated_genes":["SJAG_04920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a gluconate across a membrane by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"gluconate transmembrane transport","termid":"GO:0035429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of gluconate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0032893"],"synonyms":[{"name":"regulation of gluconate membrane transport","type":"exact"},{"name":"regulation of gluconate transport","type":"related"}],"termid":"GO:0035430","terms_by_termid":{"GO:0035432":null}}


id: PBO:0055299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2726","termid":"PBO:0055299"}


id: PBO:0082795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U4/U6.U5 snRNP complex; involved in pre-mRNA splicing via spliceosome; also required for pre-5S rRNA processing and may act in concert with Rnh70p; has homology to human SART-1","termid":"PBO:0082795"}


id: PBO:0058656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6784","termid":"PBO:0058656"}


id: GO:0060831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened contributing to the dorsal/ventral pattern of the neural tube.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"dorsal/ventral neural tube patterning","termid":"GO:0021904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:0060831"}


id: PBO:0075447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 2","termid":"PBO:0075447"}


id: PBO:0048336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 47","termid":"PBO:0048336"}


id: GO:0032195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed late in the endocytic pathway when the pH in the vacuole becomes neutral prior to exocytosis.","definition_xrefs":["PMID:23494323","GOC:pf","PMID:9276759","PMID:9394012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"},{"relation_name":"is_a","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"post-lysosomal vacuole","synonyms":[{"name":"post-lysosome","type":"exact"},{"name":"postlysosome","type":"exact"}],"termid":"GO:0032195"}


id: PBO:0041955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil and C2 domain containing 2A","termid":"PBO:0041955"}


id: PBO:0044921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 6 like","termid":"PBO:0044921"}


id: GO:0008912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propane-1,2-diol + NAD+ = lactaldehyde + NADH + H+.","definition_xrefs":["EC:1.1.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"lactaldehyde reductase activity","synonyms":[{"name":"(R)- or (S)-propane-1,2-diol:NAD+ oxidoreductase activity","type":"related"},{"name":"lactaldehyde:propanediol oxidoreductase activity","type":"related"},{"name":"propanediol oxidoreductase activity","type":"broad"},{"name":"propanediol:nicotinamide adenine dinucleotide (NAD) oxidoreductase activity","type":"related"}],"termid":"GO:0008912"}


id: PBO:0055020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2435","termid":"PBO:0055020"}


id: PBO:0064215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCB1 intronic transcript 1","termid":"PBO:0064215"}


id: PBO:0109280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL3 divergent transcript","termid":"PBO:0109280"}


id: GO:0016936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycoside in which the sugar group is galactose.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"galactoside binding","termid":"GO:0016936"}


id: PBO:0108904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP6 pseudogene 1","termid":"PBO:0108904"}


id: GO:1904491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a ciliary transition zone.","definition_xrefs":["GO_REF:0000087","PMID:21422230","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to ciliary transition zone","synonyms":[{"name":"protein localisation in ciliary transition zone","type":"exact"},{"name":"protein localisation to ciliary transition zone","type":"exact"},{"name":"protein localization in ciliary transition zone","type":"exact"}],"termid":"GO:1904491"}


id: PBO:0074454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC related modular calcium binding 2","termid":"PBO:0074454"}


id: GO:0090271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor production","termid":"GO:0090270"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor production","termid":"GO:0090269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor production","termid":"GO:0090271"}


id: GO:0140894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to an endolysosomal pattern recognition receptor (PRR) of the toll-like family. PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["PMID:29679565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endolysosomal toll-like receptor signaling pathway","synonyms":[{"name":"endolysosomal pattern recognition receptor signaling pathway","type":"exact"}],"termid":"GO:0140894"}


id: FYPO:0003129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that dots cannot be observed during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased punctate nuclear protein localization during cellular response to ionizing radiation","termid":"FYPO:0003483"},{"relation_name":"is_a","term_name":"loss of punctate nuclear protein localization","termid":"FYPO:0005863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"loss of punctate nuclear protein localization during cellular response to ionizing radiation","synonyms":[{"name":"abolished punctate nuclear protein localization during cellular response to ionizing radiation","type":"exact"},{"name":"loss of punctate nuclear protein localisation during cellular response to ionising radiation","type":"exact"},{"name":"loss of punctate nuclear protein localization during cellular response to IR","type":"exact"},{"name":"loss of punctate nuclear protein localization during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"loss of punctate nuclear protein localization during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0003129"}


id: PBO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein","termid":"PBO:0001527"}


id: PBO:0029427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029427"}


id: PATO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color between white and black colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grey","synonyms":[{"name":"plumbeous","type":"related"}],"termid":"PATO:0000950"}


id: PBO:0041545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 114","termid":"PBO:0041545"}


id: PBO:0073865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 1","termid":"PBO:0073865"}


id: PBO:0078315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta constant","termid":"PBO:0078315"}


id: GO:0140355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a cargo receptor and initiates endocytosis.","definition_xrefs":["PMID:15797858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cargo receptor ligand activity","secondary_identifiers":["Reactome:R-HSA-3000074","Reactome:R-HSA-3132759","Reactome:R-HSA-3000120"],"synonyms":[{"name":"cargo","type":"related"}],"termid":"GO:0140355"}


id: FYPO:0006759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome organization is abnormal during the meiotic cell cycle.","definition_xrefs":["GO:0070192","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"abnormal meiotic chromosome organization","synonyms":[{"name":"abnormal chromosome organization during meiotic cell cycle","type":"exact"},{"name":"abnormal chromosome organization involved in meiotic cell cycle","type":"exact"},{"name":"abnormal meiotic chromosome organisation","type":"exact"}],"termid":"FYPO:0006759"}


id: GO:0018322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a tyrosine molecule to a protein amino acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein tyrosinylation (obsolete GO:0018322)","synonyms":[{"name":"protein amino acid tyrosinylation","type":"exact"}],"termid":"GO:0018322"}


id: PBO:0082799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of transport protein particle (TRAPP) complex II; TRAPPII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating intra-Golgi and endosome-Golgi traffic; promotes association of TRAPPII-specific subunits with the TRAPP core complex; sedlin related; human Sedlin mutations cause SEDT, a skeletal disorder","termid":"PBO:0082799"}


id: PBO:0087145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding subunit of the mRNA cleavage and polyadenylation factor; involved in poly(A) site recognition and required for both pre-mRNA cleavage and polyadenylation, 51% sequence similarity with mammalian AAUAA-binding subunit of CPSF","termid":"PBO:0087145"}


id: GO:0015964
data:
  {"annotated_genes":["SJAG_04169","SJAG_04939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107575,113210],"is_not":false,"summary":null,"term":"GO:0015964"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diadenosine triphosphate, a derivative of the nucleoside adenosine with three phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate catabolic process","termid":"GO:0015961"},{"relation_name":"is_a","term_name":"diadenosine triphosphate metabolic process","termid":"GO:0015962"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04169":null,"SJAG_04939":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diadenosine triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine triphosphate breakdown","type":"exact"},{"name":"diadenosine triphosphate catabolism","type":"exact"},{"name":"diadenosine triphosphate degradation","type":"exact"}],"termid":"GO:0015964","terms_by_termid":{"GO:0015964":null}}


id: GO:0000779
data:
  {"annotated_genes":["SJAG_00918","SJAG_03540","SJAG_03220","SJAG_02731","SJAG_02664","SJAG_01775","SJAG_01067","SJAG_00418","SJAG_01836","SJAG_01228","SJAG_02814","SJAG_01297","SJAG_01613","SJAG_04884","SJAG_02624","SJAG_04126","SJAG_05321","SJAG_03619","SJAG_01601","SJAG_00082","SJAG_00794","SJAG_01278","SJAG_04040","SJAG_04581","SJAG_04696","SJAG_05019","SJAG_04623","SJAG_04177","SJAG_01082","SJAG_02761","SJAG_01928","SJAG_01837","SJAG_04255","SJAG_04745","SJAG_01224","SJAG_01330","SJAG_02451","SJAG_03867","SJAG_00684","SJAG_03161","SJAG_03681","SJAG_04038","SJAG_02346","SJAG_01831","SJAG_00307","SJAG_04076","SJAG_00207","SJAG_00697","SJAG_02336","SJAG_03217","SJAG_03437","SJAG_04699","SJAG_04841","SJAG_00350","SJAG_00666","SJAG_04412","SJAG_03327","SJAG_05266","SJAG_05273","SJAG_00646","SJAG_04259","SJAG_01211","SJAG_02807","SJAG_01371","SJAG_03683","SJAG_03989","SJAG_03832","SJAG_05220","SJAG_01546","SJAG_03916","SJAG_05319","SJAG_01805","SJAG_03048","SJAG_02513"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83982,85840,85895,86214,87113,87399,90436,90829,91441,91700,94748,95247,95395,96642,98197,98570,101590,101663,103621,103865,103909,105268,106436,106481,108311,109249,109357,109913,110260,112047,112988],"is_not":false,"summary":null,"term":"GO:0000779"},{"annotations":[85298,87115,110225,94750,113043,106020,103623,105011,85897,96644],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042729"},{"annotations":[112795,109358,86190,95397,108312,101665,110618,106437,85841,110261,112023],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000939"},{"annotations":[103624,104371,86136,105270,110688,89920,96504,95341,109359,109250,105337,108313,106438,102427,85842,109515,97459,84170,94751,111207,115280,85511,96645,90831,114754,106032,94046,114788,98571,109683,110619,101591,109914,114238,91442,112048,90898,86191,97926,108020,108175,90334,98486,95398,96263,106482,92902,111674,110262,93421,86921,102475,112796,114947,100022,115456,87116,91701],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000776"},{"annotations":[97460,109915],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180019"},{"annotations":[106483,106439,91702,95399],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000444"},{"annotations":[94047,102476,86192,110689,109251,101666,109684,90438,110263,85843,90832],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031511"},{"annotations":[107808,84172],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033551"},{"annotations":[98572,105271,91444,112049],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031262"},{"annotations":[85901,96511,110623,112051,98574,114761,106441,109916,91703,94756],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000940"}]},"cv_name":"cellular_component","definition":"The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.","definition_xrefs":["GOC:elh","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome, centromeric region","termid":"GO:0000775"},{"relation_name":"part_of","term_name":"condensed chromosome","termid":"GO:0000793"}],"gene_count":74,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00307":null,"SJAG_00350":null,"SJAG_00418":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00684":null,"SJAG_00697":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01067":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01831":null,"SJAG_01836":null,"SJAG_01837":null,"SJAG_01928":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02513":null,"SJAG_02624":null,"SJAG_02664":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02807":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03619":null,"SJAG_03681":null,"SJAG_03683":null,"SJAG_03832":null,"SJAG_03867":null,"SJAG_03916":null,"SJAG_03989":null,"SJAG_04038":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04581":null,"SJAG_04623":null,"SJAG_04696":null,"SJAG_04699":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_05019":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05273":null,"SJAG_05319":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"condensed chromosome, centromeric region","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21802294":null,"PMID:32109380":null},"secondary_identifiers":["GO:0000780"],"synonyms":[{"name":"condensed chromosome, centric region","type":"exact"},{"name":"condensed chromosome, centromere","type":"related"},{"name":"condensed chromosome, pericentric region","type":"related"},{"name":"condensed nuclear chromosome, centromeric region","type":"narrow"}],"termid":"GO:0000779","terms_by_termid":{"GO:0000444":null,"GO:0000776":null,"GO:0000779":null,"GO:0000939":null,"GO:0000940":null,"GO:0031262":null,"GO:0031511":null,"GO:0033551":null,"GO:0042729":null,"GO:0180019":null}}


id: PBO:0051286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-33","termid":"PBO:0051286"}


id: PBO:0073329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 5","termid":"PBO:0073329"}


id: PBO:0071172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 12","termid":"PBO:0071172"}


id: GO:0019835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["UniProtKB-KW:KW-0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytolysis","secondary_identifiers":["Wikipedia:Cytolysis"],"synonyms":[{"name":"autolysin activity","type":"related"},{"name":"bacteriocin activity","type":"related"},{"name":"bacteriolytic toxin activity","type":"related"},{"name":"holin","type":"related"},{"name":"lysin activity","type":"related"},{"name":"lysis","type":"broad"},{"name":"necrosis","type":"related"}],"termid":"GO:0019835"}


id: PBO:0061996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily F member 1","termid":"PBO:0061996"}


id: PBO:0083980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosyl transferase; involved in N-linked glycosylation; adds glucose to the dolichol-linked oligosaccharide precursor prior to transfer to protein during lipid-linked oligosaccharide biosynthesis; similar to Alg6p; human homolog ALG8 can complement yeast null mutant","termid":"PBO:0083980"}


id: PBO:0080081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 43","termid":"PBO:0080081"}


id: PBO:0110470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 263","termid":"PBO:0110470"}


id: PBO:0068025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 330","termid":"PBO:0068025"}


id: PBO:0030954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_acetylation","termid":"PBO:0030954"}


id: SO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The R segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"R_LTR_region","termid":"SO:0000423"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R_five_prime_LTR_region","synonyms":[{"name":"R 5' long term repeat region","type":"exact"},{"name":"R five prime LTR region","type":"exact"}],"termid":"SO:0000427"}


id: GO:0010487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methioninamine + spermidine = S-methyl-5'-thioadenosine + thermospermine + H+.","definition_xrefs":["EC:2.5.1.79","MetaCyc:RXN-11190","PMID:17560575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"thermospermine synthase activity","secondary_identifiers":["RHEA:30515"],"termid":"GO:0010487"}


id: PBO:0006165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_extension","termid":"PBO:0006165"}


id: PBO:0086988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of G1 transcription; binds to SCB binding factor (SBF) at SCB target promoters in early G1; dilution of Whi5p concentration during cell growth determines cell size; phosphorylation of Whi5p by the CDK, Cln3p/Cdc28p relieves repression and promoter binding by Whi5, and contributes to both the determination of critical cell size at START and cell fate; periodically expressed in G1","termid":"PBO:0086988"}


id: GO:0003854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxy-delta(5)-steroid + NAD+ = a 3-oxo-delta(5)-steroid + NADH + H+. Also acts on on 3-beta-hydroxypregn-5-en-20-one to form progesterone.","definition_xrefs":["EC:1.1.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-beta-hydroxy-delta5-steroid dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-196372","Reactome:R-HSA-192097","Reactome:R-HSA-193789","MetaCyc:1.1.1.145-RXN","Reactome:R-HSA-193816","Reactome:R-HSA-196350"],"synonyms":[{"name":"3-beta-hydroxy-5-ene steroid dehydrogenase activity","type":"related"},{"name":"3-beta-hydroxy-D5-steroid dehydrogenase activity","type":"exact"},{"name":"3beta-HSDH","type":"related"},{"name":"3beta-hydroxy steroid dehydrogenase/isomerase activity","type":"related"},{"name":"3beta-hydroxy-5-ene steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-5-ene-steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-5-ene-steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid dehydrogenase/isomerase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid oxidoreductase","type":"broad"},{"name":"3beta-hydroxy-delta5-steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-delta5-steroid:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"5-ene-3-beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"delta5-3beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"progesterone reductase activity","type":"broad"},{"name":"steroid-delta5-3beta-ol dehydrogenase activity","type":"related"}],"termid":"GO:0003854"}


id: _global:regulates_transport_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a  process that regulates a transport process and the entity transported by that process.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_transport_of","secondary_identifiers":["RO:0002011"],"termid":"_global:regulates_transport_of"}


id: PBO:0083791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in vesicle-mediated ER to Golgi transport; binds membranes and functions during vesicle docking to the Golgi; required for assembly of the ER-to-Golgi SNARE complex","termid":"PBO:0083791"}


id: PBO:0088873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg24c","termid":"PBO:0088873"}


id: GO:0072275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric glomerulus are generated and organized. The metanephric glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney, or metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus morphogenesis","termid":"GO:0072102"},{"relation_name":"part_of","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerulus morphogenesis","termid":"GO:0072275"}


id: GO:0048704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the skeleton are generated and organized during the embryonic phase.","definition_xrefs":["GOC:dsf","PMID:16049113","GOC:dph","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"},{"relation_name":"is_a","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"embryonic skeletal system development","termid":"GO:0048706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal system morphogenesis","synonyms":[{"name":"embryonic skeletal morphogenesis","type":"exact"}],"termid":"GO:0048704"}


id: PBO:0038350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_allergic_trigger_for","termid":"PBO:0038350"}


id: PBO:0081424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280B","termid":"PBO:0081424"}


id: PBO:0003401
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YGL056C and YBR214W","termid":"PBO:0003401"}


id: PR:O14204
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mtf2 gene.","definition_xrefs":["UniProtKB:O14204","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C5D6.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.12","synonyms":[{"name":"Spom972h-mtf2","type":"exact"}],"termid":"PR:O14204"}


id: FYPO:0001365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring contraction is decreased. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["PomBase:mah","GO:1902404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of cytokinesis","termid":"FYPO:0000419"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0004803","FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of actomyosin contractile ring contraction","synonyms":[{"name":"decreased rate of actomyosin contractile ring constriction","type":"exact"},{"name":"decreased rate of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"decreased rate of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"decreased rate of contractile ring contraction","type":"exact"},{"name":"decreased rate of cytokinetic contractile ring contraction","type":"exact"},{"name":"decreased rate of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"decreased rate of mitotic contractile ring contraction","type":"exact"},{"name":"reduced rate of actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0001365"}


id: PBO:0076999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 1","termid":"PBO:0076999"}


id: GO:0034094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the association between sister chromatids of a replicated chromosome is maintained during a meiotic cell cycle.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"},{"relation_name":"regulates","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"}


id: PBO:0087666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner nuclear membrane Asi ubiquitin ligase complex; the Asi complex targets both misfolded proteins of the inner nuclear membrane-associated degradation (INMAD) pathway and regulators of sterol biosynthesis for ubiquitin-mediated degradation; acts with Asi2p and Asi3p to ensure the fidelity of SPS-sensor signaling by targeting latent unprocessed forms of Stp1p and Stp2p, maintaining the repressed state of gene expression in the absence of inducing amino acids","termid":"PBO:0087666"}


id: PBO:0057406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548i-3","termid":"PBO:0057406"}


id: PBO:0086079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with similarity to hexose transporters; expression is induced by low levels of glucose and repressed by high levels of glucose","termid":"PBO:0086079"}


id: GO:1902024
data:
  {"annotated_genes":["SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"}]},"cv_name":"biological_process","definition":"The directed movement of a L-histidine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","PMID:22822152","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"},{"relation_name":"is_a","term_name":"histidine transport","termid":"GO:0015817"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-histidine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902024","terms_by_termid":{"GO:0089708":null,"GO:0090513":null}}


id: GO:0106356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + NADPH + O2 = 3,4-dihydroxybenzoate + H2O + NADP+.","definition_xrefs":["RHEA:19477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","termid":"GO:0018671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase (NADPH) activity","synonyms":[{"name":"4-hydroxybenzoate 3-monooxygenase [NADPH] activity","type":"exact"}],"termid":"GO:0106356"}


id: PBO:0060391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 1 pseudogene 1","termid":"PBO:0060391"}


id: PBO:0069609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 886, pseudogene","termid":"PBO:0069609"}


id: GO:0042158
data:
  {"annotated_genes":["SJAG_02523","SJAG_02903","SJAG_02776","SJAG_02913","SJAG_00831","SJAG_01416","SJAG_00295","SJAG_01227","SJAG_04337","SJAG_05327","SJAG_03292","SJAG_06383","SJAG_03506","SJAG_00068","SJAG_01860","SJAG_03801","SJAG_04881","SJAG_04924","SJAG_03115","SJAG_04119","SJAG_03672","SJAG_02488","SJAG_06425","SJAG_04165","SJAG_03066","SJAG_00846","SJAG_03878","SJAG_01570","SJAG_04975","SJAG_05219","SJAG_02804","SJAG_05278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87534,88358,99848,83611,110080],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[89209,94796,94248,95003,96426,89664,97737,99175,106057,108490,110915,89118,111340,113357,84824,96360,104713,107728,99911,112267,103676,85706,102844,85091,90651,87360,92565],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006506"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any conjugated, water-soluble protein in which the covalently attached nonprotein group consists of a lipid or lipids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"lipoprotein metabolic process","termid":"GO:0042157"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lipoprotein anabolism","type":"exact"},{"name":"lipoprotein biosynthesis","type":"exact"},{"name":"lipoprotein formation","type":"exact"},{"name":"lipoprotein synthesis","type":"exact"}],"termid":"GO:0042158","terms_by_termid":{"GO:0006506":null,"GO:0016255":null}}


id: GO:1990086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a lens fiber cell. Lens fiber cells are elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["PMID:11095619","CL:0011004","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell apoptotic process","termid":"GO:1990086"}


id: GO:1904995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte adhesion to vascular endothelial cell.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","GOC:bc","GOC:BHF","PMID:23897866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"negatively_regulates","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte adhesion to vascular endothelial cell","synonyms":[{"name":"down regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"down-regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"downregulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"inhibition of leukocyte adhesion to vascular endothelial cell","type":"narrow"}],"termid":"GO:1904995"}


id: GO:0031653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any homeostatic process in which an organism releases excess heat to the environment, thereby lowering its internal temperature.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heat dissipation","termid":"GO:0031653"}


id: PBO:0073047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 5","termid":"PBO:0073047"}


id: PBO:0065197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 18","termid":"PBO:0065197"}


id: PBO:0079576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin D pseudogene 1","termid":"PBO:0079576"}


id: GO:0000806
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in males of species in which the male is the heterogametic sex; generally, the sex chromosome that pairs with the X chromosome in the heterogametic sex. The Y chromosome is absent from the cells of females and present in one copy in the somatic cells of males.","definition_xrefs":["GOC:mr","ISBN:0582227089","PMID:20622855","GOC:mah","Wikipedia:XY_sex-determination_system"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Y chromosome","secondary_identifiers":["Wikipedia:Y_chromosome"],"termid":"GO:0000806"}


id: PBO:0016069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zf-C2H2 type","termid":"PBO:0016069"}


id: GO:0034475
data:
  {"annotated_genes":["SJAG_00854","SJAG_01521","SJAG_04527","SJAG_04818","SJAG_01176","SJAG_03179","SJAG_04153","SJAG_04084","SJAG_04824","SJAG_04321","SJAG_02156"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72499,84551,89205,92063,93401,98221,98311,100536,101382,102588,114410],"is_not":false,"summary":null,"term":"GO:0034475"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a U4 snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA 3'-end processing","termid":"GO:0034472"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01521":null,"SJAG_02156":null,"SJAG_03179":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016073","GO:0010467"],"is_obsolete":false,"name":"U4 snRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"U4 snRNA 3' end processing","type":"exact"}],"termid":"GO:0034475","terms_by_termid":{"GO:0034475":null}}


id: GO:0033403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UUA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"UUA codon-amino acid adaptor activity","synonyms":[{"name":"TTA codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033403"}


id: PBO:0056886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake 1","termid":"PBO:0056886"}


id: PBO:0071156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 21","termid":"PBO:0071156"}


id: FYPO:0001464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases to a greater extent than normal immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PMID:21811607","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased immediate intracellular calcium spike following extracellular calcium stimulus (obsolete FYPO:0001464)","synonyms":[{"name":"increased immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"increased immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001464"}


id: GO:0010831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"positively_regulates","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myotube differentiation","termid":"GO:0010831"}


id: GO:0097083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a vascular smooth muscle cell regardless of its environment; upon determination, the cell fate cannot be reversed. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate determination","termid":"GO:0007521"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell fate commitment","termid":"GO:0097081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell fate determination","synonyms":[{"name":"vascular smooth muscle cell fate determination","type":"exact"}],"termid":"GO:0097083"}


id: PBO:0038631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminocarboxymuconate semialdehyde decarboxylase","termid":"PBO:0038631"}


id: GO:0052579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-isomenthone + NADP+ = (+)-pulegone + NADPH + H+.","definition_xrefs":["EC:1.3.1.81","MetaCyc:RXN-5164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(+)-pulegone reductase, (+)-isomenthone as substrate, activity","synonyms":[{"name":"(+)-isomenthone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052579"}


id: PBO:0073956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 5","termid":"PBO:0073956"}


id: PR:O74922
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.12 gene.","definition_xrefs":["UniProtKB:O74922","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.12","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC757.12","type":"exact"}],"termid":"PR:O74922"}


id: PBO:0057124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 208a","termid":"PBO:0057124"}


id: PR:Q9P7J0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.16c","synonyms":[{"name":"Spom972h-SPCC24B10.16c","type":"exact"}],"termid":"PR:Q9P7J0"}


id: PR:O13827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19A8.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19A8.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.11c","synonyms":[{"name":"Spom972h-SPAC19A8.11c","type":"exact"}],"termid":"PR:O13827"}


id: PBO:0084615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloprotease; involved in N-terminal processing of pro-a-factor to mature form; expressed in both haploids and diploids; one of two yeast homologs of human insulin-degrading enzyme (hIDE); homolog Axl1p is also involved in processing of pro-a-factor","termid":"PBO:0084615"}


id: GO:1990843
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrion that occurs adjacent to the sarcolemma in striated muscle cells and responds in distinct ways to physiological triggers.","definition_xrefs":["PMID:26039174","PMID:23297307"],"gene_count":0,"genotype_count":0,"name":"obsolete subsarcolemmal mitochondrion (obsolete GO:1990843)","synonyms":[{"name":"SS mitochondrion","type":"exact"},{"name":"SSM","type":"exact"}],"termid":"GO:1990843"}


id: PBO:0043540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 8","termid":"PBO:0043540"}


id: SO:0100021
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A subsection of sequence with biological interest that is conserved in different proteins. They may or may not have functional or structural significance within the proteins in which they are found.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_conserved_region","synonyms":[{"name":"polypeptide conserved region","type":"exact"}],"termid":"SO:0100021"}


id: GO:0043821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + propionyl-CoA = succinyl-CoA + propionate.","definition_xrefs":["PMID:10769117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"propionyl-CoA:succinate CoA-transferase activity","secondary_identifiers":["MetaCyc:RXN0-268","RHEA:28010"],"synonyms":[{"name":"propionyl-CoA succinate CoA-transferase activity","type":"exact"},{"name":"propionyl-CoA:succinate CoA transferase activity","type":"exact"}],"termid":"GO:0043821"}


id: GO:0140242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the postsynapse.","definition_xrefs":["PMID:20427644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at synapse","termid":"GO:0140241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translation at postsynapse","termid":"GO:0140242"}


id: PBO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap104","termid":"PBO:0002294"}


id: RO:0002509
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"s 'determined by part of' w if and only if there exists some f such that (1) s 'determined by' f and (2) f part_of w, or f=w.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"causal_relation_between_material_entities","termid":"RO:0002506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"determined_by_part_of","termid":"RO:0002509"}


id: FYPO:0001459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the level of transcription from a calcineurin-dependent response element (CDRE)-containing promoter is higher than normal in the absence of a calcium ion stimulus.","definition_xrefs":["PomBase:mah","PMID:21811607"],"gene_count":0,"genotype_count":0,"name":"obsolete increased basal transcription from CDRE promoter (obsolete FYPO:0001459)","synonyms":[{"name":"increased basal transcription from CDRE promoter during mitotic cell cycle","type":"related"},{"name":"increased basal transcription from CDRE promoter during vegetative growth","type":"exact"},{"name":"increased transcription from CRDE promoter in the absence of calcium","type":"exact"}],"termid":"FYPO:0001459"}


id: PBO:0030770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0030770"}


id: PBO:0081236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 2","termid":"PBO:0081236"}


id: GO:0102913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indol-3-ylmethylamine + S-adenosyl-L-methionine = H+ + N-methyl-3-aminomethylindole + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-aminomethylindole N-methyltransferase activity","secondary_identifiers":["RHEA:52268","MetaCyc:RXN-8686"],"termid":"GO:0102913"}


id: PBO:0031077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_response_phenotype","termid":"PBO:0031077"}


id: RO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in organization of c iff p results in the assembly, arrangement of constituent parts, or disassembly of c","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_organization_of","termid":"RO:0002592"}


id: GO:0005080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein kinase C.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein kinase C binding","secondary_identifiers":["GO:0097024","GO:0072568","GO:0072569"],"synonyms":[{"name":"PKC alpha binding","type":"exact"},{"name":"PKC binding","type":"exact"},{"name":"PKC delta binding","type":"exact"},{"name":"PKC eta binding","type":"exact"},{"name":"protein kinase C alpha binding","type":"narrow"},{"name":"protein kinase C delta binding","type":"narrow"},{"name":"protein kinase C eta binding","type":"narrow"}],"termid":"GO:0005080"}


id: PBO:0059848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1","termid":"PBO:0059848"}


id: GO:0010875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol efflux","termid":"GO:0010874"},{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"positively_regulates","term_name":"cholesterol efflux","termid":"GO:0033344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol efflux","termid":"GO:0010875"}


id: GO:0004775
data:
  {"annotated_genes":["SJAG_01524","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86072,111102],"is_not":false,"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate.","definition_xrefs":["RHEA:17661","PMID:9874242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-CoA ligase activity","termid":"GO:0004774"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"succinate-CoA ligase (ADP-forming) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SUCCCOASYN-RXN","EC:6.2.1.5","Reactome:R-HSA-70997","KEGG_REACTION:R00405"],"synonyms":[{"name":"succinate thiokinase activity","type":"related"},{"name":"succinic thiokinase","type":"broad"},{"name":"succinyl coenzyme A synthetase","type":"broad"},{"name":"succinyl coenzyme A synthetase (adenosine diphosphate-forming) activity","type":"related"},{"name":"succinyl-CoA synthetase (ADP-forming) activity","type":"related"},{"name":"succinyl-CoA synthetase activity","type":"related"}],"termid":"GO:0004775","terms_by_termid":{"GO:0004775":null}}


id: GO:0061682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a seminal vesicle are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"seminal vesicle development","termid":"GO:0061107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seminal vesicle morphogenesis","termid":"GO:0061682"}


id: GO:0019457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methionine into other compounds, including succinyl-CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"methionine catabolic process","termid":"GO:0009087"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006520","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"methionine catabolic process to succinyl-CoA","secondary_identifiers":["MetaCyc:METHIONINE-DEG1-PWY"],"synonyms":[{"name":"methionine breakdown to succinyl-CoA","type":"exact"},{"name":"methionine degradation to succinyl-CoA","type":"exact"}],"termid":"GO:0019457"}


id: PBO:0056479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATN1 antisense RNA 1","termid":"PBO:0056479"}


id: PBO:0029266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029266"}


id: PBO:0071177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 18","termid":"PBO:0071177"}


id: GO:0048475
data:
  {"annotated_genes":["SJAG_00906","SJAG_04565","SJAG_00072","SJAG_02234","SJAG_00379","SJAG_00108","SJAG_04931","SJAG_04474","SJAG_05345","SJAG_01809","SJAG_00284","SJAG_04391","SJAG_02349","SJAG_04002","SJAG_03907","SJAG_03726","SJAG_04644","SJAG_02282","SJAG_02453","SJAG_04070","SJAG_02177","SJAG_02482","SJAG_01167","SJAG_01508","SJAG_00800","SJAG_00104","SJAG_00192","SJAG_04517","SJAG_05344","SJAG_04569","SJAG_03153","SJAG_02539","SJAG_04609","SJAG_03558","SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114978,109131,108913,97259],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[92405,104459,107719,107778],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[107618,85068,90322,92270],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030123"},{"annotations":[107621],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030131"},{"annotations":[91029,109035],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[91030],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071439"},{"annotations":[114598,111007],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[94592,109885,112508,113518,99405,103246,89347,94681,100254],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[112727,106334,74164,108104,70347,91653,104854,89484,102688,108844],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"}]},"cv_name":"cellular_component","definition":"A single or double lipid bilayer with any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_00906":null,"SJAG_01167":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02805":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03726":null,"SJAG_03907":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_04931":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"coated membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048475","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030123":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030131":null,"GO:0071439":null}}


id: PBO:0005637
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.8","termid":"PBO:0005637"}


id: PBO:0074429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 29","termid":"PBO:0074429"}


id: PBO:0053751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 989","termid":"PBO:0053751"}


id: PBO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor (predicted)","termid":"PBO:0002206"}


id: PBO:0088301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35A","termid":"PBO:0088301"}


id: GO:0030594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neurotransmitter and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neurotransmitter receptor activity","termid":"GO:0030594"}


id: GO:0070221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfide oxidation process that proceeds via the reaction catalyzed by sulfide:quinone oxidoreductase.","definition_xrefs":["MetaCyc:P222-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfide oxidation","termid":"GO:0019418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfide oxidation, using sulfide:quinone oxidoreductase","synonyms":[{"name":"sulfide oxidation, using sulfide-quinone reductase","type":"exact"},{"name":"sulphide oxidation, using sulfide:quinone oxidoreductase","type":"exact"}],"termid":"GO:0070221"}


id: GO:0019516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of lactate to other compounds, such as pyruvate, with concomitant loss of electrons.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactate oxidation","termid":"GO:0019516"}


id: PBO:0080919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 8","termid":"PBO:0080919"}


id: GO:0046911
data:
  {"annotated_genes":["SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89437],"is_not":false,"summary":null,"term":"GO:0046911"}]},"cv_name":"molecular_function","definition":"The formation of bonds from two or more atoms within the same ligand to a metal atom in complexes in which the metal is part of a ring.","definition_xrefs":["ISBN:0198506732","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"metal chelating activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heavy metal chelation","type":"narrow"},{"name":"metal chelation","type":"exact"}],"termid":"GO:0046911","terms_by_termid":{"GO:0046911":null}}


id: PBO:0068079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 385","termid":"PBO:0068079"}


id: PBO:0034424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protease_activator_(obsolete_protease_activator)","termid":"PBO:0034424"}


id: SO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short (typically a few hundred base pairs) DNA sequence that has a single occurrence in a genome and whose location and base sequence are known.","direct_ancestors":[{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STS","synonyms":[{"name":"INSDC_feature:STS","type":"exact"},{"name":"sequence tag site","type":"exact"}],"termid":"SO:0000331"}


id: GO:0008270
data:
  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id: FYPO:0003196
data:
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id: GO:0009604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a symbiotic bacterium, a bacterium living in close physical association with another organism, is received and converted into a molecular signal.","definition_xrefs":["ISBN:0198506732","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of symbiont","termid":"GO:0009602"},{"relation_name":"is_a","term_name":"response to symbiotic bacterium","termid":"GO:0009609"},{"relation_name":"is_a","term_name":"detection of bacterium","termid":"GO:0016045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of symbiotic bacterium","synonyms":[{"name":"detection of symbiotic bacteria","type":"exact"},{"name":"perception of symbiotic bacteria","type":"related"},{"name":"perception of symbiotic bacterium","type":"related"}],"termid":"GO:0009604"}


id: GO:0098567
data:
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id: GO:0016250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-sulfo-D-glucosamine + H2O = D-glucosamine + sulfate.","definition_xrefs":["EC:3.10.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid sulfur-nitrogen bonds","termid":"GO:0016826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N-sulfoglucosamine sulfohydrolase activity","secondary_identifiers":["Reactome:R-HSA-2090043","Reactome:R-HSA-1678708","Reactome:R-HSA-2263444","MetaCyc:N-SULFOGLUCOSAMINE-SULFOHYDROLASE-RXN","Reactome:R-HSA-9036050","RHEA:17881"],"synonyms":[{"name":"2-desoxy-D-glucoside-2-sulphamate sulphohydrolase (sulphamate sulphohydrolase)","type":"related"},{"name":"N-sulfo-D-glucosamine sulfohydrolase activity","type":"related"},{"name":"N-sulphoglucosamine sulphohydrolase activity","type":"exact"},{"name":"heparin sulfamidase activity","type":"related"},{"name":"sulfoglucosamine sulfamidase activity","type":"related"},{"name":"sulphamidase activity","type":"related"}],"termid":"GO:0016250"}


id: GO:0009174
data:
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id: GO:0042450
data:
  {"annotated_genes":["SJAG_00636","SJAG_00635","SJAG_01592","SJAG_00695","SJAG_01461","SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94302,94310,98754,99585,108037,114493],"is_not":false,"summary":null,"term":"GO:0042450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound ornithine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine biosynthetic process","termid":"GO:0006526"},{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"arginine biosynthetic process via ornithine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arginine anabolism via ornithine","type":"exact"},{"name":"arginine formation via ornithine","type":"exact"},{"name":"arginine synthesis via ornithine","type":"exact"}],"termid":"GO:0042450","terms_by_termid":{"GO:0042450":null}}


id: FYPO:0005098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A) polymerase activity (EC name polynucleotide adenylyltransferase activity) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal poly(A) polymerase activity","synonyms":[{"name":"abnormal PAP activity","type":"exact"},{"name":"abnormal polynucleotide adenylyltransferase activity","type":"exact"}],"termid":"FYPO:0005098"}


id: PBO:0044926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase delta","termid":"PBO:0044926"}


id: PBO:0059826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription termination factor 1","termid":"PBO:0059826"}


id: GO:0035440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tuberculosinol (halima-5,6,dien-15-ol), a secondary metabolite in Mycobacteria.","definition_xrefs":["MetaCyc:PWY-5935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tuberculosinol biosynthetic process","synonyms":[{"name":"halima-5,6,dien-15-ol biosynthesis","type":"exact"},{"name":"halima-5,6,dien-15-ol biosynthetic process","type":"exact"},{"name":"tuberculosinol biosynthesis","type":"exact"}],"termid":"GO:0035440"}


id: PBO:0083619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1-like protein that activates Urm1p before urmylation; also acts in thiolation of the wobble base of cytoplasmic tRNAs by adenylating and then thiolating Urm1p; receives sulfur from Tum1p","termid":"PBO:0083619"}


id: GO:0006143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete purine metabolic process (obsolete GO:0006143)","synonyms":[{"name":"purine metabolic process","type":"exact"}],"termid":"GO:0006143"}


id: PBO:0050359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 62","termid":"PBO:0050359"}


id: PBO:0085420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; involved in efflux of fluconazole, diazaborine, benomyl, methotrexate, and other drugs; expression induced in cells treated with the mycotoxin patulin; relocalizes from nucleus to plasma membrane upon DNA replication stress","termid":"PBO:0085420"}


id: PBO:0027343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_primase_activity","termid":"PBO:0027343"}


id: PBO:0087828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIF (Transcription Factor II) middle subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP30","termid":"PBO:0087828"}


id: PBO:0004743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, DUF1674 family","termid":"PBO:0004743"}


id: GO:0051593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a folic acid stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to folic acid","synonyms":[{"name":"cellular response to folate","type":"exact"},{"name":"cellular response to vitamin B9","type":"exact"}],"termid":"GO:0051593"}


id: GO:0047504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-menthol + NADP+ = (2S,5R)-menthone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.207","RHEA:13917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(-)-menthol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r1182","KEGG_REACTION:R02177","MetaCyc:--MENTHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(-)-menthol:NADP+ oxidoreductase activity","type":"related"},{"name":"monoterpenoid dehydrogenase activity","type":"broad"}],"termid":"GO:0047504"}


id: GO:0043397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of corticotropin-releasing hormone secretion.","definition_xrefs":["PMID:11027914","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"corticotropin-releasing hormone secretion","termid":"GO:0043396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of corticotropin-releasing hormone secretion","synonyms":[{"name":"regulation of CRF secretion","type":"exact"},{"name":"regulation of CRH secretion","type":"exact"},{"name":"regulation of corticotropin-releasing factor secretion","type":"exact"}],"termid":"GO:0043397"}


id: PBO:0079534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP associated SURP domain containing","termid":"PBO:0079534"}


id: GO:0052925
data:
  {"annotated_genes":["SJAG_04952"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96126],"is_not":false,"summary":null,"term":"GO:0052925"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-D-man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->6))-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl D-mannosyl phosphate = H+ + alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->3)-alpha-D-Man-(1->6))-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl phosphate.","definition_xrefs":["RHEA:29527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,3-mannosyltransferase activity","termid":"GO:0000033"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.4.1.258","MetaCyc:RXN-5466","KEGG_REACTION:R06258"],"synonyms":[{"name":"dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase activity","type":"related"},{"name":"man(5)GlcNAc(2)-PP-Dol mannosyltransferase activity","type":"related"}],"termid":"GO:0052925","terms_by_termid":{"GO:0052925":null}}


id: GO:0047602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetate + H+ = acetone + CO2.","definition_xrefs":["RHEA:19729","EC:4.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"acetoacetate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R01366","MetaCyc:ACETOACETATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"acetoacetate carboxy-lyase (acetone-forming)","type":"related"},{"name":"acetoacetate carboxy-lyase activity","type":"related"},{"name":"acetoacetic acid decarboxylase activity","type":"related"}],"termid":"GO:0047602"}


id: PBO:0065404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 6","termid":"PBO:0065404"}


id: PBO:0058371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4743","termid":"PBO:0058371"}


id: PBO:0049983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible lipid droplet associated","termid":"PBO:0049983"}


id: FYPO:0002920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 36 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K36 methylation during vegetative growth","synonyms":[{"name":"normal histone H3 K36 methylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K36 methylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K36me during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K36 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002920"}


id: GO:0050878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the levels of body fluids.","definition_xrefs":["GOC:ai","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of body fluid levels","termid":"GO:0050878"}


id: GO:0010597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of volatile molecules emitted from green plants, such as hexenal, hexenol and hexenyl acetate, from linoleic acid or linolenic acid.","definition_xrefs":["PMID:17163881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoxygenase pathway","termid":"GO:0019372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"green leaf volatile biosynthetic process","termid":"GO:0010597"}


id: FYPO:0007823
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115602,115603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007824"}]},"cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which any aspect of quorum sensing is abnormal.","definition_xrefs":["GO:0009372","PomBase:mah","PMID:31150379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal quorum sensing","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"termid":"FYPO:0007823","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007824":null}}


id: PATO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape inhering in a bearer by virtue of the bearer's being elongated and cylindrical.","definition_xrefs":["PATOC:me"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"columnar","termid":"PATO:0002063"}


id: PBO:0029083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_ubiquitination","termid":"PBO:0029083"}


id: GO:0014877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle inactivity stimulus. This process occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muscle inactivity","termid":"GO:0014870"},{"relation_name":"is_a","term_name":"response to stimulus involved in regulation of muscle adaptation","termid":"GO:0014874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to muscle inactivity involved in regulation of muscle adaptation","termid":"GO:0014877"}


id: FYPO:0005707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the equatorial microtubule organizing center (eMTOC) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"},{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to eMTOC","synonyms":[{"name":"normal protein localisation to eMTOC","type":"exact"},{"name":"normal protein localization to eMTOC during mitotic cell cycle","type":"related"},{"name":"normal protein localization to eMTOC during vegetative growth","type":"exact"},{"name":"normal protein localization to equatorial microtubule organizing center","type":"exact"}],"termid":"FYPO:0005707"}


id: PBO:0077970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 22-1","termid":"PBO:0077970"}


id: PBO:0087389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Steryl ester hydrolase; catalyzes steryl ester hydrolysis at the plasma membrane; involved in sterol metabolism; YEH2 has a paralog, YEH1, that arose from the whole genome duplication","termid":"PBO:0087389"}


id: PBO:0073530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 3","termid":"PBO:0073530"}


id: PBO:0078431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-1","termid":"PBO:0078431"}


id: GO:0044616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the relaxation of muscle in a second organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"},{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of relaxation of muscle in another organism","synonyms":[{"name":"modulation of relaxation of muscle in other organism","type":"exact"},{"name":"regulation of relaxation of muscle in other organism","type":"exact"}],"termid":"GO:0044616"}


id: GO:0000109
data:
  {"annotated_genes":["SJAG_03613","SJAG_00500","SJAG_01887","SJAG_03206","SJAG_01049","SJAG_02556","SJAG_02828","SJAG_02334","SJAG_00995","SJAG_03618","SJAG_04540","SJAG_00901","SJAG_01480","SJAG_00512","SJAG_03612","SJAG_03454","SJAG_04147"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112822,112823,112844],"is_not":false,"summary":null,"term":"GO:0000109"},{"annotations":[107275,87004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070912"},{"annotations":[84532,87005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070913"},{"annotations":[106946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070522"},{"annotations":[114857,106947,107545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000110"},{"annotations":[84459,113261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000111"},{"annotations":[86405,86042,108210,99283,88300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000112"},{"annotations":[107369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000113"},{"annotations":[113262,84461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071942"}]},"cv_name":"cellular_component","definition":"Any complex formed of proteins that act in nucleotide-excision repair.","definition_xrefs":["PMID:10915862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00500":null,"SJAG_00512":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01049":null,"SJAG_01480":null,"SJAG_01887":null,"SJAG_02334":null,"SJAG_02556":null,"SJAG_02828":null,"SJAG_03206":null,"SJAG_03454":null,"SJAG_03612":null,"SJAG_03613":null,"SJAG_03618":null,"SJAG_04147":null,"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nucleotide-excision repair complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UvrB-UvrC complex","type":"narrow"},{"name":"UvrBC complex","type":"narrow"}],"termid":"GO:0000109","terms_by_termid":{"GO:0000109":null,"GO:0000110":null,"GO:0000111":null,"GO:0000112":null,"GO:0000113":null,"GO:0070522":null,"GO:0070912":null,"GO:0070913":null,"GO:0071942":null}}


id: GO:0051405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the digestion of native collagen in the triple helical region at Xaa-Gly bonds.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete microbial collagenase activity (obsolete GO:0051405)","synonyms":[{"name":"Achromobacter iophagus collagenase","type":"related"},{"name":"Clostridium histolyticum collagenase activity","type":"narrow"},{"name":"Clostridium histolyticum proteinase A","type":"related"},{"name":"aspergillopeptidase C","type":"related"},{"name":"azocollase activity","type":"related"},{"name":"clostridiopeptidase A activity","type":"exact"},{"name":"clostridiopeptidase I","type":"related"},{"name":"clostridiopeptidase II","type":"related"},{"name":"collagen peptidase activity","type":"related"},{"name":"collagen protease activity","type":"related"},{"name":"collagenase 1 activity","type":"exact"},{"name":"collagenase A activity","type":"exact"},{"name":"collagenase I activity","type":"related"},{"name":"collagenase MMP-1","type":"related"},{"name":"kollaza","type":"related"},{"name":"matrix metalloproteinase-1","type":"related"},{"name":"matrix metalloproteinase-18","type":"related"},{"name":"matrix metalloproteinase-8","type":"related"},{"name":"metallocollagenase activity","type":"related"},{"name":"metalloproteinase-1","type":"related"},{"name":"microbial collagenase activity","type":"exact"},{"name":"nucleolysin","type":"related"},{"name":"soycollagestin","type":"related"}],"termid":"GO:0051405"}


id: GO:0071266
data:
  {"annotated_genes":["SJAG_02972","SJAG_03102","SJAG_03671","SJAG_00395","SJAG_02290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64712,106635,107217],"is_not":false,"summary":null,"term":"GO:0071266"},{"annotations":[96801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[110075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid, from simpler components.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine biosynthetic process","termid":"GO:0071265"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_02290":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790","GO:0006520"],"is_obsolete":false,"name":"'de novo' L-methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"'de novo' L-methionine anabolism","type":"exact"},{"name":"'de novo' L-methionine biosynthesis","type":"exact"},{"name":"'de novo' L-methionine formation","type":"exact"},{"name":"'de novo' L-methionine synthesis","type":"exact"}],"termid":"GO:0071266","terms_by_termid":{"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0071266":null}}


id: GO:0007131
data:
  {"annotated_genes":["SJAG_03219","SJAG_04303","SJAG_02294","SJAG_02181","SJAG_02652","SJAG_01156","SJAG_05373","SJAG_01708","SJAG_00100","SJAG_03751","SJAG_05333","SJAG_00757","SJAG_02267","SJAG_02556","SJAG_01677","SJAG_04950","SJAG_04205","SJAG_01138","SJAG_02616","SJAG_03567","SJAG_00935","SJAG_02311","SJAG_02708","SJAG_02490","SJAG_03048","SJAG_02460","SJAG_04748","SJAG_03525","SJAG_00980","SJAG_07002","SJAG_03221","SJAG_01044","SJAG_02592","SJAG_05295","SJAG_01419","SJAG_00266","SJAG_02822","SJAG_02465","SJAG_00908","SJAG_01410","SJAG_03438","SJAG_00623","SJAG_01076","SJAG_03720","SJAG_00727","SJAG_02339","SJAG_00172"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84720,85224,85448,85751,86440,86489,86948,87609,88800,88877,89370,90886,93063,96680,96713,96777,97654,100006,100461,100963,100991,102849,103798,104100,107253,111659,113228,114866],"is_not":false,"summary":null,"term":"GO:0007131"},{"annotations":[104094],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010846"},{"annotations":[84713,95192,103792,112930,85319],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[105782,86488,107252,100990,104875],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010780"},{"annotations":[106431,103794],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[113224,84653,97652,89004,93062,106432,103795,96677],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[89005,96678,84654],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[104097],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045128"},{"annotations":[104484,98517],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[85223],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010845"},{"annotations":[90517,112420,85326],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010520"},{"annotations":[113418,114867,113230,106455,105216,102312,104278,113565,97656],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[112370],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double strand breaks are formed and repaired through a single or double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.","definition_xrefs":["PMID:2087779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reciprocal homologous recombination","termid":"GO:0140527"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00172":null,"SJAG_00266":null,"SJAG_00623":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_00908":null,"SJAG_00935":null,"SJAG_00980":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01138":null,"SJAG_01156":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01677":null,"SJAG_01708":null,"SJAG_02181":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02311":null,"SJAG_02339":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02490":null,"SJAG_02556":null,"SJAG_02592":null,"SJAG_02616":null,"SJAG_02652":null,"SJAG_02708":null,"SJAG_02822":null,"SJAG_03048":null,"SJAG_03219":null,"SJAG_03221":null,"SJAG_03438":null,"SJAG_03525":null,"SJAG_03567":null,"SJAG_03720":null,"SJAG_03751":null,"SJAG_04205":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_04950":null,"SJAG_05295":null,"SJAG_05333":null,"SJAG_05373":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0140013","GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007145","GO:0000021"],"synonyms":[{"name":"female meiotic recombination","type":"narrow"},{"name":"gene conversion with reciprocal crossover","type":"exact"}],"termid":"GO:0007131","terms_by_termid":{"GO:0000709":null,"GO:0000712":null,"GO:0007131":null,"GO:0010520":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null,"GO:0062209":null,"GO:1905263":null,"GO:1990918":null}}


id: PBO:0040314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 8","termid":"PBO:0040314"}


id: GO:0072635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-31 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","GOC:BHF","PMID:30328794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-31 production","secondary_identifiers":["GO:0072636"],"synonyms":[{"name":"IL-31 production","type":"exact"},{"name":"interleukin-31 secretion","type":"narrow"}],"termid":"GO:0072635"}


id: GO:0015190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-leucine from one side of a membrane to the other. L-leucine is 2-amino-4-methylpentanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-leucine transmembrane transporter activity","synonyms":[{"name":"L-leucine transporter activity","type":"broad"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"}],"termid":"GO:0015190"}


id: PBO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid permease Per1","termid":"PBO:0002213"}


id: GO:1990067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of DNA recombination occurring within a single chromosome.","definition_xrefs":["PMID:7748165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"intrachromosomal DNA recombination","synonyms":[{"name":"intrastrand DNA recombination","type":"exact"}],"termid":"GO:1990067"}


id: GO:0044077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances host receptor-mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host receptor-mediated endocytosis","synonyms":[{"name":"modulation by symbiont of host receptor-mediated endocytosis","type":"exact"},{"name":"modulation of host receptor-mediated endocytosis by symbiont","type":"exact"},{"name":"regulation by symbiont of host receptor-mediated endocytosis","type":"exact"}],"termid":"GO:0044077"}


id: PBO:0059347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S12","termid":"PBO:0059347"}


id: GO:0070470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A respiratory chain located in the plasma membrane of a cell; made up of the protein complexes that form the electron transport system (the respiratory chain), associated with the plasma membrane. The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.","definition_xrefs":["ISBN:0198547684","GOC:curators","GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respirasome","termid":"GO:0070469"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane respirasome","synonyms":[{"name":"plasma membrane electron transport chain","type":"exact"},{"name":"plasma membrane respiratory chain","type":"exact"}],"termid":"GO:0070470"}


id: PBO:0076545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAT antisense RNA 1","termid":"PBO:0076545"}


id: PBO:0057968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689a","termid":"PBO:0057968"}


id: PBO:0013458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase Gcd10 (predicted)","termid":"PBO:0013458"}


id: GO:0100008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin biosynthetic process process that regulates fever generation.","definition_xrefs":["GOC:obol","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"},{"relation_name":"regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of fever generation by prostaglandin biosynthetic process","termid":"GO:0100008"}


id: PBO:0026810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_cell_wall-degrading_enzymes","termid":"PBO:0026810"}


id: PBO:0078177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-2","termid":"PBO:0078177"}


id: PBO:0001407
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlapping genome wide occupancy in promoters Nap1/Hrp1/Hrp3","termid":"PBO:0001407"}


id: PR:Q9P7Q2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl9 gene.","definition_xrefs":["UniProtKB:Q9P7Q2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C186.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.01","synonyms":[{"name":"Spom972h-pfl9","type":"exact"}],"termid":"PR:Q9P7Q2"}


id: FYPO:0003887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which endocytosis does not occur during a meiotic cell cycle. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished endocytosis during meiotic cell cycle","synonyms":[{"name":"abolished actin-mediated endocytosis during meiotic cell cycle","type":"exact"},{"name":"abolished protein internalization during meiotic cell cycle","type":"narrow"},{"name":"absent endocytosis during meiotic cell cycle","type":"exact"},{"name":"endocytosis abolished during meiotic cell cycle","type":"exact"},{"name":"endocytosis: absent during meiotic cell cycle","type":"related"}],"termid":"FYPO:0003887"}


id: GO:0140010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-aspartate from one side of a membrane to the other.","definition_xrefs":["GO_REF:0000070","PMID:7914198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"D-aspartate transmembrane transporter activity","termid":"GO:0140010"}


id: PR:O59819
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP--glucose-1-phosphate uridylyltransferase-like protein Ugp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.10","synonyms":[{"name":"Spom972h-SPCC794.10","type":"exact"},{"name":"UDP-glucose pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"UDPGP (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"UGPase (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:O59819"}


id: PBO:0046688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit beta lysine methyltransferase","termid":"PBO:0046688"}


id: PBO:0017858
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of dextrin to glucose is 7.6 (uM min-1 ml-2)","termid":"PBO:0017858"}


id: PBO:0027376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_fragmented_nuclear_envelope_and_nuclear_pore_aggregation_in_cytoplasm_during_mitotic_telophase","termid":"PBO:0027376"}


id: PBO:0039876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 32","termid":"PBO:0039876"}


id: PBO:0075672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 3","termid":"PBO:0075672"}


id: PBO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 3","termid":"PBO:0043508"}


id: PBO:0003734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51 (predicted)","termid":"PBO:0003734"}


id: GO:1903205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of hydrogen peroxide-induced cell death.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hydrogen peroxide-induced cell death (obsolete GO:1903205)","synonyms":[{"name":"protection against hydrogen peroxide-mediated cell death","type":"related"},{"name":"regulation of cell death in response to H2O2","type":"exact"},{"name":"regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"regulation of hydrogen peroxide-mediated cell death","type":"related"}],"termid":"GO:1903205"}


id: GO:0071425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a hematopoietic stem cell population by cell division. A hematopoietic stem cell is a stem cell from which all cells of the lymphoid and myeloid lineages develop.","definition_xrefs":["CL:0000037","GOC:add","GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell proliferation","termid":"GO:0072089"},{"relation_name":"part_of","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell proliferation","synonyms":[{"name":"hemopoietic stem cell proliferation","type":"exact"}],"termid":"GO:0071425"}


id: PBO:0069252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 507, pseudogene","termid":"PBO:0069252"}


id: GO:0016963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interaction with the alpha-2 macroglobulin receptor and glycoprotein gp330 forming a complex with the alpha-2 macroglobulin receptor light and heavy chains.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-2 macroglobulin receptor-associated protein activity (obsolete GO:0016963)","synonyms":[{"name":"alpha-2 macroglobulin receptor-associated protein activity","type":"exact"}],"termid":"GO:0016963"}


id: PBO:0090312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ddx27/Drs1","termid":"PBO:0090312"}


id: PBO:0049812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC4 antisense RNA 1","termid":"PBO:0049812"}


id: PBO:0003048
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.16.1.7","termid":"PBO:0003048"}


id: FYPO:0005161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle progression resumes after a longer time than normal after exposure to hydroxyurea.","definition_xrefs":["PMID:16849602","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of cell cycle progression following cellular response to hydroxyurea","synonyms":[{"name":"delayed cell cycle progression following HU exposure","type":"exact"},{"name":"delayed cell cycle progression following cellular response to HU","type":"exact"},{"name":"delayed cell cycle progression following cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005161"}


id: GO:0010008
data:
  {"annotated_genes":["SJAG_04822","SJAG_01981","SJAG_00108","SJAG_03511","SJAG_04023","SJAG_07012","SJAG_01379","SJAG_01242","SJAG_01112","SJAG_02587","SJAG_03250","SJAG_04349","SJAG_04024","SJAG_03347","SJAG_00314","SJAG_05207","SJAG_02429","SJAG_04936","SJAG_00301","SJAG_00416","SJAG_04489","SJAG_03783","SJAG_05210","SJAG_02100","SJAG_00299","SJAG_01236","SJAG_03892","SJAG_00638","SJAG_04513","SJAG_00900","SJAG_04912"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60383,85070,94822,98103,98115,103415,106116],"is_not":false,"summary":null,"term":"GO:0010008"},{"annotations":[86721],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010009"},{"annotations":[92034,95841,108586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031901"},{"annotations":[88131,84291],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000813"},{"annotations":[105919,107587,106768],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000814"},{"annotations":[94099,99275,99863,84125,97021,102681],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000815"},{"annotations":[105921,84292,105931,93803,95639,88132,97213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031902"},{"annotations":[115478,88248,90053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"},{"annotations":[94998,108701],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00314":null,"SJAG_00416":null,"SJAG_00638":null,"SJAG_00900":null,"SJAG_01112":null,"SJAG_01236":null,"SJAG_01242":null,"SJAG_01379":null,"SJAG_01981":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_02587":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03511":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04513":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005768","GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"endosome membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["NIF_Subcellular:sao978443756"],"synonyms":[{"name":"endosomal membrane","type":"exact"}],"termid":"GO:0010008","terms_by_termid":{"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0010008":null,"GO:0010009":null,"GO:0031901":null,"GO:0031902":null,"GO:0032585":null,"GO:0034424":null}}


id: GO:0071202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP10 associated with the channel via interaction with the Kv alpha subunit 4.3.","definition_xrefs":["PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Kv4.3-DPP10 channel complex","secondary_identifiers":["CORUM:598"],"synonyms":[{"name":"Kv4.3-DPPY channel complex","type":"exact"}],"termid":"GO:0071202"}


id: PBO:0079451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUSC2 pseudogene 1","termid":"PBO:0079451"}


id: GO:0016051
data:
  {"annotated_genes":["SJAG_04483","SJAG_04462","SJAG_04073","SJAG_02222","SJAG_04184","SJAG_00218","SJAG_04878","SJAG_03123","SJAG_01835","SJAG_00771","SJAG_03587","SJAG_00424","SJAG_05285","SJAG_01531","SJAG_03705","SJAG_00183","SJAG_04236","SJAG_04666","SJAG_01787","SJAG_00182","SJAG_01209","SJAG_02590","SJAG_01426","SJAG_02446","SJAG_01427","SJAG_02916","SJAG_00610","SJAG_01012","SJAG_02278","SJAG_01028","SJAG_01646","SJAG_01862","SJAG_00876","SJAG_01288","SJAG_00963","SJAG_01290","SJAG_01376","SJAG_01453","SJAG_00409","SJAG_04771","SJAG_04509","SJAG_03057","SJAG_04668","SJAG_01963","SJAG_00129"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86742,112682,98593,90354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[96750,91389,101881,89459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051072"},{"annotations":[110510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030979"},{"annotations":[90602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[87727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051274"},{"annotations":[113903,100308,105205,110511,85304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[109301,105433,87728,102220,87718,111946,103906,84241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98775,104742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[102222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051278"},{"annotations":[90114,102616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[105030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[77772,87073],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[88546],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[83688,88549],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[84068],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[86915,88535,98983,101460,88551,114017],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[85594,88555,91077,98985],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"},{"annotations":[89471,87982,92664,105031,73478,93287,97192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"biosynthetic 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biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006093"],"synonyms":[{"name":"anabolic carbohydrate metabolic process","type":"exact"},{"name":"anabolic carbohydrate metabolism","type":"exact"},{"name":"carbohydrate anabolism","type":"exact"},{"name":"carbohydrate biosynthesis","type":"exact"},{"name":"carbohydrate formation","type":"exact"},{"name":"carbohydrate synthesis","type":"exact"}],"termid":"GO:0016051","terms_by_termid":{"GO:0005978":null,"GO:0005992":null,"GO:0006078":null,"GO:0006114":null,"GO:0030979":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0051072":null,"GO:0051274":null,"GO:0051278":null,"GO:0060635":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0050459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox and leucine zipper encoding","termid":"PBO:0050459"}


id: PBO:0028853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_UV","termid":"PBO:0028853"}


id: SO:0005841
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A snoRNA that specifies the site of 2'-O-ribose methylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"methylation_guide_snoRNA_primary_transcript","termid":"SO:0000580"},{"relation_name":"is_a","term_name":"C_D_box_snoRNA","termid":"SO:0000593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylation_guide_snoRNA","synonyms":[{"name":"methylation guide snoRNA","type":"exact"}],"termid":"SO:0005841"}


id: PR:P0CT60
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2301 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L23-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.03","synonyms":[{"name":"Spom972h-rpl2301","type":"exact"}],"termid":"PR:P0CT60"}


id: PBO:0026994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_meiotic_cell_cycle","termid":"PBO:0026994"}


id: FYPO:0000933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"decreased protein localisation to microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"decreased protein localization to microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to microtubule cytoskeleton during vegetative growth","type":"exact"}],"termid":"FYPO:0000933"}


id: PBO:0048373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated regulator of MAPK1 subtype 1","termid":"PBO:0048373"}


id: PBO:0080057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP27X divergent transcript","termid":"PBO:0080057"}


id: GO:0070228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of lymphocyte death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"regulates","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte apoptotic process","synonyms":[{"name":"regulation of lymphocyte apoptosis","type":"narrow"}],"termid":"GO:0070228"}


id: PBO:0064314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 3","termid":"PBO:0064314"}


id: PBO:0049174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor receptor bound protein 7","termid":"PBO:0049174"}


id: PBO:0046297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMSY divergent transcript","termid":"PBO:0046297"}


id: PBO:0051486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGSF3 pseudogene 1","termid":"PBO:0051486"}


id: PBO:0067908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 210","termid":"PBO:0067908"}


id: GO:0004156
data:
  {"annotated_genes":["SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101061],"is_not":false,"summary":null,"term":"GO:0004156"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + 4-aminobenzoate = diphosphate + dihydropteroate.","definition_xrefs":["EC:2.5.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"dihydropteroate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:19949","MetaCyc:H2PTEROATESYNTH-RXN"],"synonyms":[{"name":"(2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl-diphosphate:4-aminobenzoate 2-amino-4-hydroxydihydropteridine-6-methenyltransferase activity","type":"related"},{"name":"2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine-diphosphate:4-aminobenzoate 2-amino-4-hydroxydihydropteridine-6-methenyltransferase activity","type":"related"},{"name":"7,8-dihydropteroate synthase activity","type":"related"},{"name":"7,8-dihydropteroate synthetase activity","type":"related"},{"name":"7,8-dihydropteroic acid synthetase activity","type":"related"},{"name":"DHPS activity","type":"related"},{"name":"dihydropteroate diphosphorylase activity","type":"related"},{"name":"dihydropteroate pyrophosphorylase activity","type":"related"},{"name":"dihydropteroate synthetase activity","type":"related"},{"name":"dihydropteroic synthetase activity","type":"related"}],"termid":"GO:0004156","terms_by_termid":{"GO:0004156":null}}


id: PBO:0090551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S12 Mrps12b","termid":"PBO:0090551"}


id: PBO:0001281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51D-like protein 1","termid":"PBO:0001281"}


id: PATO:0001275
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of magenta color and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magenta","termid":"PATO:0000321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated magenta","synonyms":[{"name":"bright magenta","type":"related"}],"termid":"PATO:0001275"}


id: MOD:00511
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, HexNAc(2)","definition_xrefs":["PubMed:5490222","Unimod:143","PubMed:111247","PubMed:1694179","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(2)","type":"related"},{"name":"HexNAc2","type":"related"}],"termid":"MOD:00511"}


id: PBO:0111349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp10","termid":"PBO:0111349"}


id: PBO:0087143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein that negatively regulates growth rate; interacts with the 3' UTR of the mitochondrial porin (POR1) mRNA and enhances its degradation; overexpression impairs mitochondrial function; interacts with Dhh1p to mediate POR1 mRNA decay; expressed in stationary phase","termid":"PBO:0087143"}


id: PBO:0064170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVF","termid":"PBO:0064170"}


id: PBO:0001292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin/tropomyosin family","termid":"PBO:0001292"}


id: PBO:0085531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S29 and bacterial S14; RPS29B has a paralog, RPS29A, that arose from the whole genome duplication","termid":"PBO:0085531"}


id: PBO:0070837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 16","termid":"PBO:0070837"}


id: GO:0035896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism increases the frequency, rate or extent of blood mast cell degranulation in another organism.","definition_xrefs":["GOC:bf","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of mast cell degranulation in another organism","termid":"GO:0035895"},{"relation_name":"is_a","term_name":"positive regulation of mast cell degranulation","termid":"GO:0043306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell degranulation in another organism","synonyms":[{"name":"positive regulation of mast cell degranulation in other organism","type":"exact"},{"name":"up-regulation of mast cell degranulation in other organism","type":"related"},{"name":"upregulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0035896"}


id: GO:1990947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the progression from anaphase/telophase of meiosis II to the creation of end products of meiosis, in which ploidy is reduced by half.","definition_xrefs":["PMID:21389117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"exit from meiosis","synonyms":[{"name":"meiotic exit","type":"exact"}],"termid":"GO:1990947"}


id: FYECO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using camptothecin (CPT) and subsequently released from the block.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPT block and release","termid":"FYECO:0000386"}


id: PR:O13789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized beta-glucan synthesis-associated protein C17G6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.11c","synonyms":[{"name":"Spom972h-SPAC17G6.11c","type":"exact"}],"termid":"PR:O13789"}


id: GO:0036391
data:
  {"annotated_genes":["SJAG_04375","SJAG_01658","SJAG_00663","SJAG_03374","SJAG_00118","SJAG_04703","SJAG_04566","SJAG_02645","SJAG_01277","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93961,94037,96241,97089,97901,100054,104080,108904,113981,114739],"is_not":false,"summary":null,"term":"GO:0036391"}]},"cv_name":"cellular_component","definition":"A ring-shaped structure that forms at the medial cortex of a symmetrically dividing cell at the onset of cytokinesis; composed of members of the conserved family of filament forming proteins called septins as well as septin-associated proteins.","definition_xrefs":["PMID:16009555","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"},{"relation_name":"part_of","term_name":"medial cortex","termid":"GO:0031097"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00663":null,"SJAG_01277":null,"SJAG_01658":null,"SJAG_02645":null,"SJAG_03374":null,"SJAG_03703":null,"SJAG_04375":null,"SJAG_04566":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"medial cortex septin ring","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036391","terms_by_termid":{"GO:0036391":null}}


id: PBO:0065298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 2","termid":"PBO:0065298"}


id: PBO:0089087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc complex subunit Noc201","termid":"PBO:0089087"}


id: FYPO:0006514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology","termid":"FYPO:0006512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere structure","synonyms":[{"name":"normal chromosome structure at telomere","type":"exact"},{"name":"normal chromosome structure at telomeric region","type":"exact"},{"name":"normal telomeric region structure","type":"exact"}],"termid":"FYPO:0006514"}


id: PBO:0074380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 6","termid":"PBO:0074380"}


id: GO:0008190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation factor binding","termid":"GO:0031369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"eukaryotic initiation factor 4E binding","synonyms":[{"name":"eIF4E binding","type":"exact"}],"termid":"GO:0008190"}


id: PBO:0065983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1G","termid":"PBO:0065983"}


id: GO:0043855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a cyclic nucleotide has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"cyclic nucleotide-activated monoatomic ion channel activity","synonyms":[{"name":"cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"cyclic nucleotide-gated ion channel activity","type":"broad"},{"name":"cyclic nucleotide-gated monoatomic ion channel activity","type":"exact"}],"termid":"GO:0043855"}


id: FYPO:0007214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more heterochromatin islands is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to chromatin at heterochromatin island","synonyms":[{"name":"abolished protein localisation to chromatin at heterochromatin island during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at heterochromatin island abolished","type":"exact"}],"termid":"FYPO:0007214"}


id: PBO:0076660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 22","termid":"PBO:0076660"}


id: GO:0030008
data:
  {"annotated_genes":["SJAG_02525","SJAG_04618","SJAG_03663","SJAG_00820","SJAG_04021","SJAG_02655","SJAG_04358","SJAG_03467","SJAG_02750","SJAG_01415","SJAG_04837","SJAG_00850"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93454,84832,98662,105952,85500,95238,101006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990070"},{"annotations":[85501,105953,84833,99514,98663,95239,112559,93455,95893,101007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990071"},{"annotations":[101008,105954,93456,98664,101078,99875,95240,84834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990072"}]},"cv_name":"cellular_component","definition":"A large complex that acts as a tethering factor involved in transporting vesicles from the ER through the Golgi to the plasma membrane. A TRAPP (transport protein particle) complex has a core set of proteins which are joined by specific subunits depending on the cellular component where a given TRAPP complex is active.","definition_xrefs":["GOC:bhm","GOC:vw","PMID:22669257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00820":null,"SJAG_00850":null,"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_04021":null,"SJAG_04358":null,"SJAG_04618":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TRAPP complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:TRAPP_complex"],"synonyms":[{"name":"TRAPP1","type":"narrow"},{"name":"TRAPP2","type":"narrow"},{"name":"transport protein particle","type":"exact"},{"name":"transport protein particle complex","type":"exact"}],"termid":"GO:0030008","terms_by_termid":{"GO:1990070":null,"GO:1990071":null,"GO:1990072":null}}


id: GO:1900561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dehydroaustinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"dehydroaustinol metabolic process","synonyms":[{"name":"dehydroaustinol metabolism","type":"exact"}],"termid":"GO:1900561"}


id: FYPO:0004315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"},{"relation_name":"output_of","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule cytoskeleton physical object quality during vegetative growth","type":"exact"},{"name":"disorganized microtubule cytoskeleton during vegetative growth","type":"related"}],"termid":"FYPO:0004315"}


id: PBO:0111859
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain","termid":"PBO:0111859"}


id: PBO:0078540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 32","termid":"PBO:0078540"}


id: PBO:0024479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation inhibitor (predicted)","termid":"PBO:0024479"}


id: GO:0018882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-camphor, a bicyclic monoterpene ketone which is one of the major components in the leaves of common sage. Camphor exists in two enantiomers, but the (+)-isomer is more widely distributed.","definition_xrefs":["UM-BBD_pathwayID:cam"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"(+)-camphor metabolic process","synonyms":[{"name":"(+)-camphor metabolism","type":"exact"},{"name":"camphor metabolic process","type":"exact"},{"name":"camphor metabolism","type":"exact"}],"termid":"GO:0018882"}


id: PBO:0011444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase Mra1","termid":"PBO:0011444"}


id: PBO:0056210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B5","termid":"PBO:0056210"}


id: GO:0072302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of metanephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glomerular mesangial cell proliferation","termid":"GO:0072125"},{"relation_name":"is_a","term_name":"regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072301"},{"relation_name":"negatively_regulates","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072302"}


id: GO:0019975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:jl","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-17 binding","synonyms":[{"name":"IL-17 binding","type":"exact"}],"termid":"GO:0019975"}


id: FYPO:0006743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to osmotic stress","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to osmotic stress","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus during osmotic stress","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006743"}


id: PBO:0056290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANSC domain containing 1","termid":"PBO:0056290"}


id: GO:0017155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:hydrogen antiporter regulator activity (obsolete GO:0017155)","synonyms":[{"name":"sodium:hydrogen antiporter regulator activity","type":"exact"},{"name":"sodium:proton antiporter regulator","type":"exact"}],"termid":"GO:0017155"}


id: PBO:0031725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination","termid":"PBO:0031725"}


id: PBO:0086008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; subunit of the leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms a ring-like structure at the leading edge of the prospore membrane during meiosis II; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0086008"}


id: PATO:0002073
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that arises from the synergistic strength of bond affinities between multiple bond interactions.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avidity","termid":"PATO:0002073"}


id: GO:0106123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large membrane-bound endocytic organelle present only in members of the Schizotrypanum subgenus of the Trypanosoma genus and is defined as the site of storage of endocytosed macromolecules and lysosomal enzymes. It is found at the posterior end of epimastigote forms of Trypanosoma cruzi, but absent in amastigotes and trypomastigotes.","definition_xrefs":["PMID:15521631","PMID:1845219","PMID:19288526","PMID:22425988","PMID:12204365","PMID:21818313","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"storage vacuole","termid":"GO:0000322"},{"relation_name":"is_a","term_name":"lytic vacuole","termid":"GO:0000323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"reservosome","termid":"GO:0106123"}


