# terms

id: PBO:0082769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sorting and Assembly Machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; the complex binds precursors of beta-barrel proteins and facilitates their outer membrane insertion; homologous to bacterial Omp85","termid":"PBO:0082769"}


id: PBO:0057067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 148b","termid":"PBO:0057067"}


id: GO:1902575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization to cell division site that is involved in cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["GOC:al","PMID:24127216","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"part_of","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0051179","GO:0007010","GO:0030036","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell division site involved in cytokinesis, actomyosin contractile ring assembly","synonyms":[{"name":"protein localisation to cell division site involved in constriction ring assembly","type":"narrow"},{"name":"protein localisation to cell division site involved in contractile ring assembly","type":"exact"},{"name":"protein localisation to cell division site involved in cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"protein localisation to cell division site involved in cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"protein localisation to cell division site involved in cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"protein localisation to cell division site involved in cytokinesis, actomyosin ring formation","type":"related"},{"name":"protein localisation to cell division site involved in cytokinesis, contractile ring assembly","type":"related"},{"name":"protein localization to cell division site involved in constriction ring assembly","type":"narrow"},{"name":"protein localization to cell division site involved in contractile ring assembly","type":"exact"},{"name":"protein localization to cell division site involved in cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"protein localization to cell division site involved in cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"protein localization to cell division site involved in cytokinesis, actomyosin ring formation","type":"related"},{"name":"protein localization to cell division site involved in cytokinesis, contractile ring assembly","type":"related"}],"termid":"GO:1902575"}


id: GO:0038184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by a ligand binding to a bile acid receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:12419312","PMID:36409000","PMID:19442546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"bile acid signaling pathway","termid":"GO:0038183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway","synonyms":[{"name":"cell surface bile acid receptor signaling pathway","type":"broad"},{"name":"membrane bile acid receptor signaling pathway","type":"related"}],"termid":"GO:0038184"}


id: GO:0018580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethylnitronate + O2 = acetaldehyde + nitrite.","definition_xrefs":["RHEA:28767","EC:1.13.12.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"nitronate monooxygenase activity","secondary_identifiers":["MetaCyc:2-NITROPROPANE-DIOXYGENASE-RXN"],"synonyms":[{"name":"2-nitropropane dioxygenase activity","type":"related"},{"name":"nitronate:oxygen 2-oxidoreductase (nitrite-forming) activity","type":"exact"}],"termid":"GO:0018580"}


id: PBO:0027162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_kinetochore_during_meiosis_I","termid":"PBO:0027162"}


id: SO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exon that does not contain any codons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noncoding_exon","synonyms":[{"name":"noncoding exon","type":"exact"}],"termid":"SO:0000198"}


id: PBO:0074594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 7B","termid":"PBO:0074594"}


id: PBO:0089409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, ATP:ADP antiporter Anc1","termid":"PBO:0089409"}


id: GO:0004115
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112520],"is_not":false,"summary":null,"term":"GO:0004115"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',5'-cyclic AMP + H2O = AMP + H+.","definition_xrefs":["RHEA:25277","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"3',5'-cyclic-AMP phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-418553","EC:3.1.4.53","Reactome:R-HSA-9629675","Reactome:R-HSA-9644869","Reactome:R-HSA-111962","MetaCyc:RXN0-5038","Reactome:R-HSA-9708261","Reactome:R-HSA-9705507"],"synonyms":[{"name":"3',5' cAMP-specific phosphodiesterase activity","type":"exact"},{"name":"3',5'-cAMP-specific phosphodiesterase activity","type":"exact"},{"name":"3',5'-cyclic-AMP-specific phosphodiesterase activity","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-specific phosphodiesterase activity","type":"exact"},{"name":"cAMP-specific phosphodiesterase activity","type":"exact"},{"name":"cyclic AMP-specific phosphodiesterase activity","type":"exact"}],"termid":"GO:0004115","terms_by_termid":{"GO:0004115":null}}


id: PBO:0069772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1055, pseudogene","termid":"PBO:0069772"}


id: PBO:0048187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABA type A receptor associated protein like 2","termid":"PBO:0048187"}


id: FYPO:0002565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation does not occur. All histone methylation may be affected, or methylation of specific sites on specific histones may be abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"},{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone methylation during vegetative growth","synonyms":[{"name":"abolished histone methylation during mitotic cell cycle","type":"related"},{"name":"histone methylation abolished during vegetative growth","type":"exact"},{"name":"histone methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002565"}


id: PBO:0054378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1774","termid":"PBO:0054378"}


id: PBO:0075505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated serine rich 2 like","termid":"PBO:0075505"}


id: GO:1900717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of violaceol II biosynthetic process","termid":"GO:1900716"},{"relation_name":"negatively_regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of violaceol II biosynthetic process","synonyms":[{"name":"down regulation of violaceol II anabolism","type":"exact"},{"name":"down regulation of violaceol II biosynthesis","type":"exact"},{"name":"down regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down regulation of violaceol II formation","type":"exact"},{"name":"down regulation of violaceol II synthesis","type":"exact"},{"name":"down-regulation of violaceol II anabolism","type":"exact"},{"name":"down-regulation of violaceol II biosynthesis","type":"exact"},{"name":"down-regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down-regulation of violaceol II formation","type":"exact"},{"name":"down-regulation of violaceol II synthesis","type":"exact"},{"name":"downregulation of violaceol II anabolism","type":"exact"},{"name":"downregulation of violaceol II biosynthesis","type":"exact"},{"name":"downregulation of violaceol II biosynthetic process","type":"exact"},{"name":"downregulation of violaceol II formation","type":"exact"},{"name":"downregulation of violaceol II synthesis","type":"exact"},{"name":"inhibition of violaceol II anabolism","type":"exact"},{"name":"inhibition of violaceol II biosynthesis","type":"exact"},{"name":"inhibition of violaceol II biosynthetic process","type":"narrow"},{"name":"inhibition of violaceol II formation","type":"exact"},{"name":"inhibition of violaceol II synthesis","type":"exact"},{"name":"negative regulation of violaceol II anabolism","type":"exact"},{"name":"negative regulation of violaceol II biosynthesis","type":"exact"},{"name":"negative regulation of violaceol II formation","type":"exact"},{"name":"negative regulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900717"}


id: PBO:0085728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the processing of pre-rRNA to mature rRNA; contains a C2/C2 zinc finger motif; srd1 mutation suppresses defects caused by the rrp1-1 mutation","termid":"PBO:0085728"}


id: PBO:0005397
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible false positive domain, EF hand","termid":"PBO:0005397"}


id: GO:0033906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of 1,3-linkages between beta-D-glucuronate and N-acetyl-D-glucosamine residues in hyaluronate.","definition_xrefs":["EC:3.2.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"hyaluronoglucuronidase activity","secondary_identifiers":["MetaCyc:3.2.1.36-RXN"],"synonyms":[{"name":"glucuronoglucosaminoglycan hyaluronate lyase activity","type":"related"},{"name":"hyaluronate 3-glycanohydrolase activity","type":"related"},{"name":"hyaluronidase activity","type":"broad"},{"name":"orgelase activity","type":"related"}],"termid":"GO:0033906"}


id: GO:0035422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK activity involved in innate immune response (obsolete GO:0035422)","termid":"GO:0035422"}


id: GO:0033126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of GTP catabolic process (obsolete GO:0033126)","synonyms":[{"name":"positive regulation of GTP breakdown","type":"exact"},{"name":"positive regulation of GTP catabolism","type":"exact"},{"name":"positive regulation of GTP degradation","type":"exact"}],"termid":"GO:0033126"}


id: PBO:0054470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1870","termid":"PBO:0054470"}


id: GO:0140749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phlorizin + H2O = beta-D-glucose + phloretin.","definition_xrefs":["RHEA:69639","PMID:9762914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"phlorizin hydrolase activity","termid":"GO:0140749"}


id: PBO:0031209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_activation_of_bipolar_cell_growth","termid":"PBO:0031209"}


id: GO:0046889
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"positively_regulates","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of lipid biosynthetic process","type":"narrow"},{"name":"positive regulation of lipid anabolism","type":"exact"},{"name":"positive regulation of lipid biosynthesis","type":"exact"},{"name":"positive regulation of lipid formation","type":"exact"},{"name":"positive regulation of lipid synthesis","type":"exact"},{"name":"positive regulation of lipogenesis","type":"exact"},{"name":"stimulation of lipid biosynthetic process","type":"narrow"},{"name":"up regulation of lipid biosynthetic process","type":"exact"},{"name":"up-regulation of lipid biosynthetic process","type":"exact"},{"name":"upregulation of lipid biosynthetic process","type":"exact"}],"termid":"GO:0046889","terms_by_termid":{"GO:0070452":null}}


id: PBO:0073219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEMA6A antisense RNA 1","termid":"PBO:0073219"}


id: GO:0070181
data:
  {"annotated_genes":["SJAG_01387","SJAG_00253","SJAG_01132","SJAG_04281","SJAG_01468"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92774,95790,95791,111831,112146],"is_not":false,"summary":null,"term":"GO:0070181"}]},"cv_name":"molecular_function","definition":"Binding to small ribosomal subunit RNA (SSU rRNA), a constituent of the small ribosomal subunit. In S. cerevisiae, this is the 18S rRNA.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00253":null,"SJAG_01132":null,"SJAG_01387":null,"SJAG_01468":null,"SJAG_04281":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"small ribosomal subunit rRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"18S rRNA binding","type":"exact"},{"name":"SSU rRNA binding","type":"exact"}],"termid":"GO:0070181","terms_by_termid":{"GO:0070181":null}}


id: PBO:0077561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 268","termid":"PBO:0077561"}


id: PBO:0071286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 9","termid":"PBO:0071286"}


id: PBO:0038758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 3","termid":"PBO:0038758"}


id: GO:0062195
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93433],"is_not":false,"summary":null,"term":"GO:0062195"}]},"cv_name":"biological_process","definition":"The organization process that preserves a microtubule bundle in a stable functional or structural state.","definition_xrefs":["PMID:18061564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule bundle maintenance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062195","terms_by_termid":{"GO:0062195":null}}


id: PBO:0091488
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ErMes Regulator","termid":"PBO:0091488"}


id: GO:0075502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Induction of endosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus through the endosomal pathway, and results in delivery of the virus contents into the host cell cytoplasm.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeabilization of host organelle membrane involved in viral entry into host cell","termid":"GO:0039665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome membrane permeabilization involved in viral entry into host cell","secondary_identifiers":["GO:0075518"],"synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by endosome membrane","type":"related"},{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by endosome membrane permeabilization","type":"related"}],"termid":"GO:0075502"}


id: PR:Q9P6J3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trehalose-6-phosphate hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02339","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase Mal1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.07","secondary_identifiers":["UniProtKB:Q9P6J3"],"synonyms":[{"name":"SPBC1683.07","type":"related"},{"name":"Spom972h-treC","type":"exact"},{"name":"maltase (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:Q9P6J3"}


id: PBO:0083532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SPT4/YGR063C","termid":"PBO:0083532"}


id: FYPO:0003345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to nitrogen starvation does not occur; arrest normally occurs in G1 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle arrest in mitotic G1 phase during nitrogen starvation","termid":"FYPO:0001000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0000257","FYPO:0000631","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"abolished cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"abolished mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"abolished mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"abolished nitrogen deprivation-induced G1 arrest","type":"exact"},{"name":"cell cycle arrest in mitotic G1 phase in response to nitrogen starvation abolished","type":"exact"}],"termid":"FYPO:0003345"}


id: PBO:0005667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Spc19","termid":"PBO:0005667"}


id: PR:O14215
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA primase small subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01013","PANTHER:PTHR10536:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA primase small subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.10c","secondary_identifiers":["UniProtKB:O14215"],"synonyms":[{"name":"Spom972h-PRIM1","type":"exact"}],"termid":"PR:O14215"}


id: GO:0042144
data:
  {"annotated_genes":["SJAG_03386","SJAG_01299","SJAG_05194","SJAG_03072","SJAG_01072","SJAG_01080","SJAG_02384","SJAG_04909","SJAG_04966","SJAG_00380","SJAG_03137","SJAG_03915","SJAG_02433","SJAG_01598","SJAG_00330","SJAG_00029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87306,87433,96093,96388,96447,96886,97257,100757,104407,105558,106398,110645,112961],"is_not":false,"summary":null,"term":"GO:0042144"},{"annotations":[97582],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061192"},{"annotations":[106396,93766],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061191"},{"annotations":[93536],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032889"}]},"cv_name":"biological_process","definition":"The fusion of two vacuole membranes to form a single vacuole.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole fusion","termid":"GO:0097576"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00330":null,"SJAG_00380":null,"SJAG_01072":null,"SJAG_01080":null,"SJAG_01299":null,"SJAG_01598":null,"SJAG_02384":null,"SJAG_02433":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03386":null,"SJAG_03915":null,"SJAG_04909":null,"SJAG_04966":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vacuole fusion, non-autophagic","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0042145"],"synonyms":[{"name":"homotypic vacuole fusion","type":"exact"},{"name":"homotypic vacuole fusion (non-autophagic)","type":"exact"},{"name":"homotypic vacuole fusion, non-autophagic","type":"exact"},{"name":"vacuole fusion (non-autophagic)","type":"exact"}],"termid":"GO:0042144","terms_by_termid":{"GO:0032889":null,"GO:0042144":null,"GO:0061191":null,"GO:0061192":null}}


id: GO:1990116
data:
  {"annotated_genes":["SJAG_04384","SJAG_01497","SJAG_03345","SJAG_00188","SJAG_01074","SJAG_01134"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84092,85418,100107,100939,102994],"is_not":false,"summary":null,"term":"GO:1990116"},{"annotations":[110540],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide encoded by an aberrant message and associated with a stalled ribosome. Degradation is initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the ribosome-associated protein.","definition_xrefs":["PMID:23358411","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_01074":null,"SJAG_01134":null,"SJAG_01497":null,"SJAG_03345":null,"SJAG_04384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"ribosome-associated ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RAD","type":"broad"},{"name":"ribosome-associated degradation","type":"broad"},{"name":"ribosome-associated ubiquitin-dependent protein breakdown","type":"exact"},{"name":"ribosome-associated ubiquitin-dependent protein catabolism","type":"exact"},{"name":"ribosome-associated ubiquitin-dependent protein degradation","type":"exact"}],"termid":"GO:1990116","terms_by_termid":{"GO:0140708":null,"GO:1990116":null}}


id: PR:Q09772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair and recombination protein RAD54B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00275","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rdh54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.03c","secondary_identifiers":["UniProtKB:Q09772"],"synonyms":[{"name":"ATP-dependent helicase rdh54 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RAD54 protein homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RAD54B","type":"exact"},{"name":"meiotically up-regulated gene 34 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09772"}


id: GO:0004276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of mature proteins from their proproteins by cleavage of the terminal bond of Arg-Xaa-Yaa-Arg-Z motifs where Xaa can be any amino acid and Yaa is Arg or Lys. Releases albumin, complement component C3 and von Willebrand factor from their respective precursors.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete furin activity (obsolete GO:0004276)","synonyms":[{"name":"PACE","type":"related"},{"name":"SPC3","type":"related"},{"name":"dibasic processing enzyme activity","type":"related"},{"name":"furin activity","type":"exact"},{"name":"paired basic amino acid cleaving enzyme","type":"related"},{"name":"paired basic amino acid converting enzyme","type":"related"},{"name":"paired basic amino acid residue cleaving enzyme activity","type":"related"},{"name":"prohormone convertase activity","type":"narrow"},{"name":"serine proteinase PACE","type":"related"}],"termid":"GO:0004276"}


id: PBO:0067647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 822, pseudogene","termid":"PBO:0067647"}


id: PBO:0003004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DIPSY family","termid":"PBO:0003004"}


id: GO:1902252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of erythrocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:rl","GOC:BHF","PMID:14569084","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"regulation of erythrocyte apoptotic process","termid":"GO:1902250"},{"relation_name":"positively_regulates","term_name":"erythrocyte apoptotic process","termid":"GO:1902217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte apoptotic process","synonyms":[{"name":"activation of RBC apoptosis","type":"narrow"},{"name":"activation of RBC apoptotic process","type":"narrow"},{"name":"activation of erythrocyte apoptosis","type":"narrow"},{"name":"activation of erythrocyte apoptotic process","type":"narrow"},{"name":"activation of red blood cell apoptosis","type":"narrow"},{"name":"activation of red blood cell apoptotic process","type":"narrow"},{"name":"positive regulation of RBC apoptosis","type":"narrow"},{"name":"positive regulation of RBC apoptotic process","type":"exact"},{"name":"positive regulation of erythrocyte apoptosis","type":"narrow"},{"name":"positive regulation of red blood cell apoptosis","type":"narrow"},{"name":"positive regulation of red blood cell apoptotic process","type":"exact"},{"name":"up regulation of RBC apoptosis","type":"narrow"},{"name":"up regulation of RBC apoptotic process","type":"exact"},{"name":"up regulation of erythrocyte apoptosis","type":"narrow"},{"name":"up regulation of erythrocyte apoptotic process","type":"exact"},{"name":"up regulation of red blood cell apoptosis","type":"narrow"},{"name":"up regulation of red blood cell apoptotic process","type":"exact"},{"name":"up-regulation of RBC apoptosis","type":"narrow"},{"name":"up-regulation of RBC apoptotic process","type":"exact"},{"name":"up-regulation of erythrocyte apoptosis","type":"narrow"},{"name":"up-regulation of erythrocyte apoptotic process","type":"exact"},{"name":"up-regulation of red blood cell apoptosis","type":"narrow"},{"name":"up-regulation of red blood cell apoptotic process","type":"exact"},{"name":"upregulation of RBC apoptosis","type":"narrow"},{"name":"upregulation of RBC apoptotic process","type":"exact"},{"name":"upregulation of erythrocyte apoptosis","type":"narrow"},{"name":"upregulation of erythrocyte apoptotic process","type":"exact"},{"name":"upregulation of red blood cell apoptosis","type":"narrow"},{"name":"upregulation of red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902252"}


id: PomGeneEx:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is present at the same level under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constant","termid":"PomGeneEx:0000007"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA level constant","synonyms":[{"name":"RNA expression constant","type":"exact"},{"name":"constant RNA level","type":"exact"}],"termid":"PomGeneEx:0000016"}


id: PBO:0110985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-acting regulatory lncRNA nam1, byr2 repressing","termid":"PBO:0110985"}


id: PBO:0068495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 79, pseudogene","termid":"PBO:0068495"}


id: FYPO:0000768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of valinomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to valinomycin","synonyms":[{"name":"resistance to valinomycin during mitotic cell cycle","type":"related"},{"name":"resistance to valinomycin during vegetative growth","type":"exact"},{"name":"resistant to valinomycin","type":"exact"}],"termid":"FYPO:0000768"}


id: PATO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's catalytic activity divided by the volume of the system.","definition_xrefs":["IUPAC:IUPAC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalytic (activity) concentration","termid":"PATO:0001674"}


id: PBO:0040187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase 1","termid":"PBO:0040187"}


id: PBO:0058211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4503","termid":"PBO:0058211"}


id: PBO:0077698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tankyrase 2","termid":"PBO:0077698"}


id: GO:0033074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of the monoterpenoid pinene; alpha-pinene is (1S,5S)-2,6,6-trimethylbicyclo[3.1.1]hept-2-ene, and beta-pinene is (1S,5S)-6,6-dimethyl-2-methylenebicyclo[3.1.1]heptane.","definition_xrefs":["PMID:11452597","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinene metabolic process","termid":"GO:0033073"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"pinene catabolic process","synonyms":[{"name":"pinene catabolism","type":"exact"},{"name":"pinene breakdown","type":"exact"},{"name":"pinene degradation","type":"exact"}],"termid":"GO:0033074"}


id: GO:0010285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + LL-2,6-diaminopimelate = (S)-2,3,4,5-tetrahydrodipicolinate + L-glutamate + H2O + H+.","definition_xrefs":["RHEA:23988","EC:2.6.1.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L,L-diaminopimelate aminotransferase activity","secondary_identifiers":["KEGG_REACTION:R07613","MetaCyc:RXN-7737","GO:0043742"],"synonyms":[{"name":"LL-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"LL-DAP aminotransferase activity","type":"related"},{"name":"LL-DAP-AT activity","type":"related"},{"name":"LL-diaminopimelate aminotransferase activity","type":"exact"},{"name":"LL-diaminopimelate transaminase activity","type":"related"}],"termid":"GO:0010285"}


id: PBO:0002852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease accessory protein UreF (predicted)","termid":"PBO:0002852"}


id: FYPO:0004149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxal kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal pyridoxal kinase activity","termid":"FYPO:0004149"}


id: GO:0030533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The codon binding activity of a tRNA that positions an activated amino acid, mediating its insertion at the correct point in the sequence of a nascent polypeptide chain during protein synthesis.","definition_xrefs":["GOC:mtg_MIT_16mar07","ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"},{"relation_name":"is_a","term_name":"molecular adaptor activity","termid":"GO:0060090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"triplet codon-amino acid adaptor activity","synonyms":[{"name":"tRNA","type":"related"},{"name":"transfer RNA","type":"related"}],"termid":"GO:0030533"}


id: PBO:0079292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 10","termid":"PBO:0079292"}


id: GO:0015880
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The directed movement of coenzyme A into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, is an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"coenzyme A transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015880","terms_by_termid":{"GO:1990559":null}}


id: GO:0035749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the myelin sheath nearest to the axon.","definition_xrefs":["GOC:BHF","PMID:20237282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myelin sheath","termid":"GO:0043209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"myelin sheath adaxonal region","termid":"GO:0035749"}


id: PBO:0088936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain protein Sqs2","termid":"PBO:0088936"}


id: PBO:0048363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 74","termid":"PBO:0048363"}


id: FYPO:0006329
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007770"},{"annotations":[115381,115380,115382,115384],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which organelle localization, i.e. any process in which an organelle is transported to, and/or maintained in, a specific location, is abnormal.","definition_xrefs":["GO:0051640","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null,"SJAG_03892":null},"genotype_count":5,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal organelle localization","references_by_uniquename":{"PMID:24184107":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03449","SJAG_01834","SJAG_03892"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","vps4delta","pom152delta","man1delta"],"synonyms":[{"name":"abnormal organelle localisation","type":"exact"},{"name":"abnormal organelle localization during mitotic cell cycle","type":"related"},{"name":"abnormal organelle localization during vegetative growth","type":"exact"}],"termid":"FYPO:0006329","terms_by_termid":{"FYPO:0004890":null,"FYPO:0007770":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0086040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in DNA repair","termid":"PBO:0086040"}


id: PBO:0004223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase","termid":"PBO:0004223"}


id: PBO:0051759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 5","termid":"PBO:0051759"}


id: RO:HOM0000032
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paedomorphosis that is produced by a retardation of somatic development.","definition_xrefs":["ISBN:978-0674639416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_paedomorphorsis_relationship_with","termid":"RO:HOM0000029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_neoteny_relationship_with","synonyms":[{"name":"juvenilization","type":"exact"},{"name":"neotenous to","type":"exact"}],"termid":"RO:HOM0000032"}


id: PBO:0088192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcriptional repressor; cooperates with Mig1p in glucose-induced gene repression; under low glucose conditions relocalizes to mitochondrion, where it interacts with Ups1p, antagonizes mitochondrial fission factor Dnm1p, indicative of a role in mitochondrial fusion or regulating morphology; regulates filamentous growth in response to glucose depletion; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0088192"}


id: GO:1990865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an episodic stimulus indicating lowered oxygen tension.","definition_xrefs":["PMID:24055447"],"gene_count":0,"genotype_count":0,"name":"obsolete response to intermittent hypoxia (obsolete GO:1990865)","termid":"GO:1990865"}


id: PBO:0049109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 166 pseudogene","termid":"PBO:0049109"}


id: PBO:0065957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23 homolog A, nucleotide excision repair protein","termid":"PBO:0065957"}


id: PBO:0003695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi five-dependent recombination repair protein Sfr1","termid":"PBO:0003695"}


id: FYECO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with no adenine.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, no adenine","termid":"FYECO:0000286"}


id: FYPO:0005342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is normal (i.e. indistinguishable from wild type) during anaphase B.","definition_xrefs":["PMID:19686686","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rate of mitotic spindle elongation","termid":"FYPO:0004429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of mitotic spindle elongation during anaphase B","synonyms":[{"name":"normal mitotic spindle elongation rate during anaphase B","type":"exact"},{"name":"normal rate of mitotic spindle elongation during anaphase B during vegetative growth","type":"exact"},{"name":"normal rate of spindle elongation during anaphase B of mitosis","type":"exact"},{"name":"normal rate of spindle elongation during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0005342"}


id: GO:0047303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + oxaloacetate = L-aspartate + glyoxylate.","definition_xrefs":["RHEA:17141","EC:2.6.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"glycine-oxaloacetate transaminase activity","secondary_identifiers":["KEGG_REACTION:R00373","MetaCyc:2.6.1.35-RXN"],"synonyms":[{"name":"glycine--oxaloacetate aminotransferase activity","type":"related"},{"name":"glycine-oxalacetate aminotransferase activity","type":"related"},{"name":"glycine-oxaloacetate aminotransferase activity","type":"exact"},{"name":"glycine:oxaloacetate aminotransferase activity","type":"related"}],"termid":"GO:0047303"}


id: PBO:0003522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxalyl-CoA decarboxylase (predicted)","termid":"PBO:0003522"}


id: GO:0008894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine 5'-triphosphate,3'-diphosphate + H2O = guanosine 5'-diphosphate,3'-diphosphate + phosphate.","definition_xrefs":["EC:3.6.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"guanosine-5'-triphosphate,3'-diphosphate diphosphatase activity","secondary_identifiers":["MetaCyc:PPPGPPHYDRO-RXN","RHEA:13073"],"synonyms":[{"name":"guanosine 5'-triphosphate 3'-diphosphate 5'-phosphatase activity","type":"related"},{"name":"guanosine 5'-triphosphate-3'-diphosphate 5'-phosphohydrolase activity","type":"related"},{"name":"guanosine pentaphosphatase activity","type":"related"},{"name":"guanosine pentaphosphate phosphatase activity","type":"related"},{"name":"guanosine pentaphosphate phosphohydrolase activity","type":"related"},{"name":"guanosine-5'-triphosphate,3'-diphosphate 5'-phosphohydrolase activity","type":"related"},{"name":"guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase activity","type":"exact"},{"name":"pppGpp 5'-phosphohydrolase activity","type":"related"}],"termid":"GO:0008894"}


id: PBO:0073277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 11","termid":"PBO:0073277"}


id: PBO:0055195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2620","termid":"PBO:0055195"}


id: PATO:0001014
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001014 absolute occurence (obsolete PATO:0001014)","termid":"PATO:0001014"}


id: GO:0097099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of albumen (also called egg white). Albumen is the clear liquid contained within an egg and consists of water and proteins, among which are ovomucin and ovomucoid. It protects the egg yolk and provides additional nutrition for the growth of the embryo.","definition_xrefs":["Wikipedia:Albumen","GOC:jj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of albumen","synonyms":[{"name":"structural constituent of egg white","type":"exact"}],"termid":"GO:0097099"}


id: FYPO:0005239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular tyrosine level","synonyms":[{"name":"increased cellular L-tyrosine level","type":"exact"},{"name":"increased cellular tyrosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular tyrosine level during vegetative growth","type":"exact"},{"name":"increased tyrosine accumulation","type":"related"}],"termid":"FYPO:0005239"}


id: GO:1902686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of a programmed cell death process.","definition_xrefs":["GOC:pg","GOC:TermGenie","GOC:mtg_apoptosis","PMID:20151314","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability","termid":"GO:0035794"},{"relation_name":"part_of","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0007005"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization involved in programmed cell death","synonyms":[{"name":"MPT involved in PCD","type":"narrow"},{"name":"MPT involved in caspase-independent apoptosis","type":"related"},{"name":"MPT involved in caspase-independent cell death","type":"narrow"},{"name":"MPT involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in programmed cell death","type":"narrow"},{"name":"MPT involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeabilization involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in regulated cell death","type":"related"},{"name":"mitochondrial outer membrane permeabilization during programmed cell death","type":"exact"},{"name":"mitochondrial permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrion outer membrane permeabilization involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in PCD","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in regulated cell death","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in PCD","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in programmed cell death","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in regulated cell death","type":"related"}],"termid":"GO:1902686"}


id: MOD:00204
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to D-leucine.","definition_xrefs":["ChEBI:30005","PubMed:12135762","PubMed:1358533","PubMed:1548227","PubMed:10461743","RESID:AA0197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-leucine","synonyms":[{"name":"(2R)-2-amino-4-methylpentanoic acid","type":"exact"},{"name":"D-Leu","type":"exact"},{"name":"D-leucine","type":"exact"},{"name":"MOD_RES D-leucine","type":"exact"},{"name":"alpha-aminoisocaproic acid","type":"exact"}],"termid":"MOD:00204"}


id: GO:0097673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is YLR224W in S. cerevisiae.","definition_xrefs":["GOC:jd","PMID:14747994","GOC:vw","PMID:25982115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Ucc1 ubiquitin ligase complex","synonyms":[{"name":"SCF-YLR224W ubiquitin ligase complex","type":"exact"}],"termid":"GO:0097673"}


id: PBO:0071983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 12","termid":"PBO:0071983"}


id: RO:0002285
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x developmentally replaces y if and only if there is some developmental process that causes x to move or to cease to exist, and for the site that was occupied by x to become occupied by y, where y either comes into existence in this site or moves to this site from somewhere else","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_replaces","termid":"RO:0002285"}


id: PBO:0040549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GNT2 pseudogene 1","termid":"PBO:0040549"}


id: PR:P78955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A checkpoint protein HUS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01999","PANTHER:PTHR12900:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint protein hus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.04c","secondary_identifiers":["UniProtKB:P78955"],"synonyms":[{"name":"Spom972h-HUS1","type":"exact"}],"termid":"PR:P78955"}


id: GO:0008288
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a protein bride of sevenless (boss) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0016740","GO:0003674","GO:0140096","GO:0004672","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"boss receptor activity","synonyms":[{"name":"sevenless receptor activity","type":"related"}],"termid":"GO:0008288"}


id: PBO:0062971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 3","termid":"PBO:0062971"}


id: PBO:0062330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 69 pseudogene","termid":"PBO:0062330"}


id: GO:0015441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + beta-glucan(in) = ADP + phosphate + beta-glucan(out).","definition_xrefs":["RHEA:18453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan transmembrane transporter activity","termid":"GO:0015160"},{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type beta-glucan transporter activity","secondary_identifiers":["MetaCyc:3.6.3.42-RXN","EC:7.5.2.3"],"synonyms":[{"name":"ABC-type beta-glucan transporter","type":"related"},{"name":"ATP-dependent beta-glucan transporter activity","type":"related"},{"name":"ATPase-coupled beta-glucan transporter activity","type":"related"},{"name":"beta-glucan ABC transporter","type":"exact"},{"name":"beta-glucan-transporting ATPase activity","type":"related"}],"termid":"GO:0015441"}


id: PBO:0063392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 6 interacting protein","termid":"PBO:0063392"}


id: GO:0046624
data:
  {"annotated_genes":["SJAG_01731","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94075,90566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of sphingolipids into, out of or within a cell, or between cells. Sphingolipids are a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sphingolipid transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9695890","Reactome:R-HSA-9843721"],"termid":"GO:0046624","terms_by_termid":{"GO:0140351":null}}


id: GO:1900628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of arugosin biosynthetic process","termid":"GO:1900626"},{"relation_name":"positively_regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of arugosin biosynthetic process","synonyms":[{"name":"activation of arugosin anabolism","type":"exact"},{"name":"activation of arugosin biosynthesis","type":"exact"},{"name":"activation of arugosin biosynthetic process","type":"narrow"},{"name":"activation of arugosin formation","type":"exact"},{"name":"activation of arugosin synthesis","type":"exact"},{"name":"positive regulation of arugosin anabolism","type":"exact"},{"name":"positive regulation of arugosin biosynthesis","type":"exact"},{"name":"positive regulation of arugosin formation","type":"exact"},{"name":"positive regulation of arugosin synthesis","type":"exact"},{"name":"up regulation of arugosin anabolism","type":"exact"},{"name":"up regulation of arugosin biosynthesis","type":"exact"},{"name":"up regulation of arugosin biosynthetic process","type":"exact"},{"name":"up regulation of arugosin formation","type":"exact"},{"name":"up regulation of arugosin synthesis","type":"exact"},{"name":"up-regulation of arugosin anabolism","type":"exact"},{"name":"up-regulation of arugosin biosynthesis","type":"exact"},{"name":"up-regulation of arugosin biosynthetic process","type":"exact"},{"name":"up-regulation of arugosin formation","type":"exact"},{"name":"up-regulation of arugosin synthesis","type":"exact"},{"name":"upregulation of arugosin anabolism","type":"exact"},{"name":"upregulation of arugosin biosynthesis","type":"exact"},{"name":"upregulation of arugosin biosynthetic process","type":"exact"},{"name":"upregulation of arugosin formation","type":"exact"},{"name":"upregulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900628"}


id: PBO:0085250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral ER membrane protein; putative ER chaperone required for the stability and function of nutrient permeases exposed to high pressure","termid":"PBO:0085250"}


id: PBO:0079468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin actin binding protein 1","termid":"PBO:0079468"}


id: PBO:0027273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_protein_coding_gene","termid":"PBO:0027273"}


id: FYPO:0000853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is abnormal. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["PomBase:mah","GO:0016584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abnormal nucleosome positioning","synonyms":[{"name":"abnormal nucleosome occupancy","type":"related"},{"name":"abnormal nucleosome positioning during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing","type":"exact"}],"termid":"FYPO:0000853"}


id: GO:0045296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cadherin, a type I membrane protein involved in cell adhesion.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion molecule binding","termid":"GO:0050839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"cadherin binding","termid":"GO:0045296"}


id: GO:0140338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a sphingomyelin from the outer leaflet of a donor membrane, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to the outer leaflet of an acceptor membrane.","definition_xrefs":["PMID:9132017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"},{"relation_name":"is_a","term_name":"sphingolipid transfer activity","termid":"GO:0120016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sphingomyelin transfer activity","secondary_identifiers":["GO:0010175"],"synonyms":[{"name":"sphingomyelin carrier activity","type":"exact"},{"name":"sphingosine transmembrane transporter activity","type":"broad"}],"termid":"GO:0140338"}


id: PBO:0031230
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_cytokinetic_cell_separation","termid":"PBO:0031230"}


id: PBO:0031877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase Inp53 (predicted)","termid":"PBO:0031877"}


id: PBO:0050206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 23","termid":"PBO:0050206"}


id: GO:0070732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle envelope that surrounds the chromosomes and the central part of the spindle apparatus during mitosis and meiosis; observed in many invertebrates. The spindle envelope consists of membrane layers, called parafusorial membranes, derived from endoplasmic reticulum membrane; in male meiosis it forms during prometaphase and persists until early in the ensuing interphase.","definition_xrefs":["GOC:mah","PMID:19417004","PMID:6428889","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope","termid":"GO:0031967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spindle envelope","termid":"GO:0070732"}


id: PBO:0040084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase D pseudogene 1","termid":"PBO:0040084"}


id: GO:0033197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin E stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin E","synonyms":[{"name":"response to DL-alpha-tocopherol acetate","type":"narrow"},{"name":"response to DL-alpha-tocopheryl acetate","type":"narrow"},{"name":"response to O-Acetyl-alpha-tocopherol","type":"narrow"}],"termid":"GO:0033197"}


id: PBO:0048748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1 pseudogene 1","termid":"PBO:0048748"}


id: GO:0010856
data:
  {"annotated_genes":["SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90369],"is_not":false,"summary":null,"term":"GO:0010856"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of adenylate cyclase.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activator activity","termid":"GO:0010853"},{"relation_name":"is_a","term_name":"adenylate cyclase regulator activity","termid":"GO:0010854"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"adenylate cyclase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010856","terms_by_termid":{"GO:0010856":null}}


id: PBO:0054092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1445","termid":"PBO:0054092"}


id: PBO:0053981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1297","termid":"PBO:0053981"}


id: GO:0000249
data:
  {"annotated_genes":["SJAG_03249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87628],"is_not":false,"summary":null,"term":"GO:0000249"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-dehydroepisterol + H+ + NADPH + O2 = ergosta-5,7,22,24(28)-tetraen-3beta-ol + 2 H2O + NADP+. This reaction is the introduction of a double bond between the C-22 and C-23 carbons of certain sterols. Also converts sitosterol and 24-epi-campesterol to stigmasterol and brassicasterol, respectively.","definition_xrefs":["EC:1.14.19.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"},{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"C-22 sterol desaturase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN3O-227"],"termid":"GO:0000249","terms_by_termid":{"GO:0000249":null}}


id: GO:1990338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha4, beta2 and gamma3 polypeptide chains.","definition_xrefs":["GOC:bhm","PMID:17453709","GOC:dph","PMID:15979864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-14 complex","synonyms":[{"name":"laminin-423","type":"exact"}],"termid":"GO:1990338"}


id: GO:0006270
data:
  {"annotated_genes":["SJAG_03438","SJAG_02162","SJAG_00857","SJAG_00696","SJAG_00536","SJAG_00311","SJAG_01354","SJAG_01762","SJAG_02607","SJAG_05301","SJAG_00364","SJAG_04879","SJAG_03160","SJAG_01624","SJAG_00327","SJAG_02348","SJAG_01267","SJAG_04210","SJAG_03927","SJAG_03695","SJAG_01210","SJAG_04994","SJAG_01823","SJAG_00874","SJAG_05239","SJAG_02074","SJAG_02394","SJAG_02908","SJAG_02627","SJAG_02667","SJAG_04623","SJAG_00884","SJAG_04341","SJAG_00399","SJAG_02098","SJAG_04995","SJAG_02800","SJAG_03451","SJAG_03048","SJAG_03720","SJAG_04671","SJAG_02172"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103473,111526,106073,109699],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[99459],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[88094,107771,109702,108165,111235,109315,106691,109617,109294,90689,101447,111530,95556,107513,108033,90078,102542,106351,93575,86589,103476,95549,99091,93472,113456,103374,111405,104177,89110,103965,108570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902975"},{"annotations":[85518,105021,98509,93916],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[99092,93576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902315"},{"annotations":[108168,113397,99462],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[85222,98514,102743,112369],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[95493],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903466"}]},"cv_name":"biological_process","definition":"The process in which DNA-dependent DNA replication is started; it begins when specific sequences, known as origins of replication, are recognized and bound by the origin recognition complex, followed by DNA unwinding.","definition_xrefs":["PMID:28209641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01210":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02162":null,"SJAG_02172":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_02908":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03451":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03927":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04623":null,"SJAG_04671":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0042024"],"synonyms":[{"name":"DNA endoreduplication initiation","type":"narrow"},{"name":"DNA re-replication initiation","type":"narrow"},{"name":"DNA-dependent DNA replication initiation","type":"exact"}],"termid":"GO:0006270","terms_by_termid":{"GO:0140529":null,"GO:0140530":null,"GO:1902315":null,"GO:1902975":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: PBO:0005195
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.1","termid":"PBO:0005195"}


id: PBO:0029775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_branched,_curved,_elongated_cells_(obsolete_FYPO:0002464)","termid":"PBO:0029775"}


id: PBO:0031859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitosis","termid":"PBO:0031859"}


id: PBO:0091189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 8","termid":"PBO:0091189"}


id: PBO:0001454
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.3","termid":"PBO:0001454"}


id: PBO:0091277
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli pyrB","termid":"PBO:0091277"}


id: GO:1903488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lactation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:mr","PMID:19563620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lactation","termid":"GO:1903487"},{"relation_name":"negatively_regulates","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lactation","synonyms":[{"name":"down regulation of lactation","type":"exact"},{"name":"down-regulation of lactation","type":"exact"},{"name":"downregulation of lactation","type":"exact"},{"name":"inhibition of lactation","type":"narrow"}],"termid":"GO:1903488"}


id: GO:0072359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the circulatory system over time, from its formation to the mature structure. The circulatory system is the organ system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells, etc. to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis.","definition_xrefs":["GOC:mah","UBERON:0001009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circulatory system development","secondary_identifiers":["GO:0072358"],"synonyms":[{"name":"cardiovascular system development","type":"narrow"}],"termid":"GO:0072359"}


id: PBO:0005885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b, Cob1 (predicted)","termid":"PBO:0005885"}


id: PBO:0047702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin 1","termid":"PBO:0047702"}


id: PBO:0046161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF2 pseudogene 1","termid":"PBO:0046161"}


id: PBO:0040819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BH3 interacting domain death agonist","termid":"PBO:0040819"}


id: PBO:0084082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine deaminase; a catabolic enzyme of the guanine salvage pathway producing xanthine and ammonia from guanine; activity is low in exponentially-growing cultures but expression is increased in post-diauxic and stationary-phase cultures","termid":"PBO:0084082"}


id: PBO:0077056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 1 pseudogene 1","termid":"PBO:0077056"}


id: GO:0102322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-propylphenol + O2 + NADH + H+ = 3-propylcatechol + H2O + NAD.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-propylphenol monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-13151","RHEA:63524"],"termid":"GO:0102322"}


id: SO:1000041
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby a transposition occurred within a chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"translocation","termid":"SO:0000199"},{"relation_name":"has_part","term_name":"duplication","termid":"SO:1000035"},{"relation_name":"is_a","term_name":"chromosomal_transposition","termid":"SO:0000453"},{"relation_name":"is_a","term_name":"intrachromosomal_duplication","termid":"SO:1000038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)Tp","type":"related"},{"name":"intrachromosomal transposition","type":"exact"}],"termid":"SO:1000041"}


id: GO:0030777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-scoulerine + S-adenosyl-L-methionine(1+) = (S)-tetrahydrocolumbamine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:23808","EC:2.1.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-scoulerine 9-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.117-RXN","KEGG_REACTION:R03835"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-scoclaurine 9-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:(S)-scoulerine 9-O-methyltransferase activity","type":"related"}],"termid":"GO:0030777"}


id: PBO:0075758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine repetitive matrix 1","termid":"PBO:0075758"}


id: GO:0021824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of cerebral cortex neuronal precursors tangentially through the cortex using interaction of the migrating cells with axons of other neurons.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex tangential migration using cell-axon interactions","termid":"GO:0021824"}


id: PR:O74441
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline transporter-like protein ctl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.11c","synonyms":[{"name":"Spom972h-ctl1","type":"exact"}],"termid":"PR:O74441"}


id: GO:0032954
data:
  {"annotated_genes":["SJAG_00526","SJAG_03936","SJAG_00514","SJAG_03342","SJAG_03048","SJAG_04776","SJAG_00256","SJAG_04455","SJAG_03592","SJAG_03508","SJAG_04666","SJAG_06270","SJAG_00845","SJAG_02838","SJAG_04597","SJAG_03681","SJAG_03353","SJAG_03631","SJAG_02645","SJAG_03581","SJAG_03704","SJAG_01386","SJAG_02380","SJAG_01787","SJAG_01114","SJAG_00883","SJAG_01188","SJAG_02169","SJAG_04509","SJAG_03309","SJAG_02392","SJAG_05290","SJAG_00082","SJAG_04468","SJAG_01805","SJAG_02592","SJAG_01790","SJAG_00229","SJAG_04943","SJAG_02514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010974"},{"annotations":[98507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[106302,103360,88969,112031,89051,95720,86872,91785,101152,89591,95800,97407,87864,103669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[90550,86151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[109496,83705,90719,106654,90551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[115521,91995,99841,106897,86914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[102499,109497,101295,89939,114003,103172,88547,86025,85394,111592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[88548,90554,83706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[86155,98525,106655,83707,89943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[77044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031991"},{"annotations":[84069,86027,90720,77045,88552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032955"},{"annotations":[115238,90516,89945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[107503,84028,97518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"},{"annotations":[114004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a cytokinetic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"cytokinetic process","termid":"GO:0032506"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02514":null,"SJAG_02592":null,"SJAG_02645":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03581":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_05290":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokinetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:0032954","terms_by_termid":{"GO:0010974":null,"GO:0031030":null,"GO:0031031":null,"GO:0031991":null,"GO:0032955":null,"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


id: PBO:0081302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 84","termid":"PBO:0081302"}


id: PBO:0001252
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion solves arginine-conversion problem","termid":"PBO:0001252"}


id: PBO:0014311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis Dph7 (predicted)","termid":"PBO:0014311"}


id: FYPO:0004025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of the tubulin poison carbendazim (mecarzole; MBC) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to carbendazim","synonyms":[{"name":"resistance to MBC","type":"exact"},{"name":"resistance to carbendazim during mitotic cell cycle","type":"related"},{"name":"resistance to carbendazim during vegetative growth","type":"exact"},{"name":"resistance to methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"resistance to methylbenzylcarbamylate","type":"exact"},{"name":"resistant to carbendazim","type":"exact"}],"termid":"FYPO:0004025"}


id: PBO:0049131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein regulated inducer of neurite outgrowth 2","termid":"PBO:0049131"}


id: FYPO:0005581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains glycerophospholipids that have shorter fatty acid chain residues than normal.","definition_xrefs":["PomBase:mah","PMID:27053105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"short glycerophospholipids","synonyms":[{"name":"decreased glycerophospholipid fatty acid chain length","type":"exact"},{"name":"reduced glycerophospholipid fatty acid chain length","type":"exact"},{"name":"short glycerophospholipids during mitotic cell cycle","type":"related"},{"name":"short glycerophospholipids during vegetative growth","type":"exact"}],"termid":"FYPO:0005581"}


id: GO:1904081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in neuron differentiation.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:24353061","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in neuron differentiation (obsolete GO:1904081)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in neuron differentiation","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in neuron differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global involved in neuron differentiation","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"}],"termid":"GO:1904081"}


id: GO:0015472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct assembly of fimbria, extracellular organelles that are used to attach a bacterial cell to a surface, but is not a component of the fimbrium when performing its normal biological function.","definition_xrefs":["PMID:7906046","GOC:rb","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete fimbrium-specific chaperone activity (obsolete GO:0015472)","synonyms":[{"name":"fimbrium-specific chaperone activity","type":"exact"}],"termid":"GO:0015472"}


id: PBO:0053991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1310","termid":"PBO:0053991"}


id: GO:0060204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted glutamate transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted glutamate transport vesicle","termid":"GO:0060199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted glutamate transport vesicle lumen","synonyms":[{"name":"clathrin sculpted glutamate constitutive secretory pathway transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted glutamate transport vesicle lumen","type":"exact"}],"termid":"GO:0060204"}


id: SO:0000777
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non functional descendant of an rRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_transcript","termid":"SO:0000516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_rRNA","synonyms":[{"name":"INSDC_feature:rRNA","type":"broad"},{"name":"INSDC_qualifier:pseudo","type":"exact"},{"name":"pseudogenic rRNA","type":"exact"}],"termid":"SO:0000777"}


id: PR:O94603
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- epe1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain-containing histone demethylation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.16c","synonyms":[{"name":"Spom972h-epe1","type":"exact"},{"name":"[Histone-H3]-lysine-36 demethylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heterochromatin-destabilizing protein epe1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94603"}


id: PBO:0091582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosomal protein Rsm2202, fusion protein","termid":"PBO:0091582"}


id: PBO:0075892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5","termid":"PBO:0075892"}


id: MOD:01896
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by trifluoroacetic acid forming an adduct, either a salt or a hydrogen bonded carboxylic acid dimer, with an amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifluoroacetic acid adduct","synonyms":[{"name":"TFA","type":"exact"}],"termid":"MOD:01896"}


id: GO:0010351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lithium ion into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:17270011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"lithium ion transport","synonyms":[{"name":"lithium transport","type":"exact"}],"termid":"GO:0010351"}


id: PBO:0027367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch","termid":"PBO:0027367"}


id: PBO:0043666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q9","termid":"PBO:0043666"}


id: PBO:0074474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMU1 DNA replication regulator and spliceosomal factor","termid":"PBO:0074474"}


id: GO:0032233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of actin filament bundles.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of actin filament bundle assembly","synonyms":[{"name":"activation of actin filament bundle formation","type":"narrow"},{"name":"stimulation of actin filament bundle formation","type":"narrow"},{"name":"up regulation of actin filament bundle formation","type":"exact"},{"name":"up-regulation of actin filament bundle formation","type":"exact"},{"name":"upregulation of actin filament bundle formation","type":"exact"}],"termid":"GO:0032233"}


id: PBO:0090877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28","termid":"PBO:0090877"}


id: GO:0034749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the Scribble protein (a cell polarity determinant) and the tumor suppressor protein adenomatous polyposis coli (APC); may be involved in the control of cell proliferation.","definition_xrefs":["PMID:16611247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Scrib-APC complex","synonyms":[{"name":"hScrib-APC complex","type":"narrow"}],"termid":"GO:0034749"}


id: PBO:0048990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 2","termid":"PBO:0048990"}


id: SO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence directly repeated at both ends of a defined sequence, of the sort typically found in retroviruses.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long_terminal_repeat","secondary_identifiers":["http://en.wikipedia.org/wiki/Long_terminal_repeat"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:long_terminal_repeat","type":"exact"},{"name":"LTR","type":"exact"},{"name":"direct terminal repeat","type":"related"},{"name":"long terminal repeat","type":"exact"}],"termid":"SO:0000286"}


id: GO:0047922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dihydroxybenzoate + O2 = 3-maleylpyruvate + H+.","definition_xrefs":["RHEA:18237","EC:1.13.11.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"gentisate 1,2-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R02656","MetaCyc:GENTISATE-12-DIOXYGENASE-RXN"],"synonyms":[{"name":"2,5-dihydroxybenzoate dioxygenase activity","type":"related"},{"name":"gentisate dioxygenase activity","type":"related"},{"name":"gentisate oxygenase activity","type":"related"},{"name":"gentisate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"gentisic acid oxidase activity","type":"related"}],"termid":"GO:0047922"}


id: PBO:0076760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDH antisense RNA 1","termid":"PBO:0076760"}


id: PBO:0111443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid family peptidase Rbd3","termid":"PBO:0111443"}


id: PBO:0073682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 4","termid":"PBO:0073682"}


id: PBO:0069517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 786, pseudogene","termid":"PBO:0069517"}


id: GO:0043507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAP kinase activity","termid":"GO:0043406"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of JUN kinase activity","synonyms":[{"name":"positive regulation of JUNK activity","type":"exact"},{"name":"stimulation of JNK activity","type":"narrow"},{"name":"up regulation of JNK activity","type":"exact"},{"name":"up-regulation of JNK activity","type":"exact"},{"name":"upregulation of JNK activity","type":"exact"}],"termid":"GO:0043507"}


id: PBO:0069678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 955, pseudogene","termid":"PBO:0069678"}


id: PBO:0064084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITH domain containing 1","termid":"PBO:0064084"}


id: PBO:0082534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; expressed under anaerobic conditions and required for anaerobic growth; transcription is also induced by cold shock; member of the Srp1p/Tip1p family of serine-alanine-rich proteins","termid":"PBO:0082534"}


id: PBO:0078148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 26-2","termid":"PBO:0078148"}


id: PBO:0002246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase (predicted)","termid":"PBO:0002246"}


id: PBO:0043741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2","termid":"PBO:0043741"}


id: GO:0031814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y4 nucleotide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"P2Y4 nucleotide receptor binding","synonyms":[{"name":"P2Y4 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031814"}


id: PR:Q09810
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylyltransferase and sulfurtransferase MOCS3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyltransferase and sulfurtransferase uba4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.10c","secondary_identifiers":["UniProtKB:Q09810"],"synonyms":[{"name":"Spom972h-MOCS3","type":"exact"},{"name":"ubiquitin-like protein activator 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09810"}


id: GO:0030451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the alternative pathway of complement activation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"complement activation, alternative pathway","termid":"GO:0006957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of complement activation, alternative pathway","synonyms":[{"name":"regulation of complement cascade, alternative pathway","type":"exact"}],"termid":"GO:0030451"}


id: PBO:0067239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 310, pseudogene","termid":"PBO:0067239"}


id: PBO:0086001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Pbi2p; double null mutant lacking Pbi2p and Yhr138cp exhibits highly fragmented vacuoles; protein abundance increases in response to DNA replication stress","termid":"PBO:0086001"}


id: GO:1902438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vanadate(3-) stimulus.","definition_xrefs":["GOC:TermGenie","PMID:7489911","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vanadate(3-)","termid":"GO:1902438"}


id: PBO:0046249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 5","termid":"PBO:0046249"}


id: PBO:0057104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 196a-1","termid":"PBO:0057104"}


id: FYPO:0006438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which DNA molecules corresponding to alkylation damage repair intermediates are absent from the cell during DNA replication.","definition_xrefs":["PomBase:mah","PMID:23071723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"alkylation damage repair intermediates absent","synonyms":[{"name":"alkylation damage repair intermediates absent during mitotic cell cycle","type":"related"},{"name":"alkylation damage repair intermediates absent during vegetative growth","type":"exact"}],"termid":"FYPO:0006438"}


id: PBO:0087371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spt4p/5p (DSIF) transcription elongation factor complex subunit; the Spt4/5 complex binds to ssRNA in a sequence-specific manner, and in concert with RNAP I and II has multiple roles regulating transcriptional elongation, RNA processing, quality control, and transcription-coupled repair; interacts with DNA upstream of RNAPII and the non-template strand of the transcription bubble; Spt5p is the only transcription elongation factor conserved in all domains of life","termid":"PBO:0087371"}


id: GO:0032738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-15 production","termid":"GO:0032658"},{"relation_name":"positively_regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-15 production","secondary_identifiers":["GO:0045374"],"synonyms":[{"name":"activation of interleukin-15 production","type":"narrow"},{"name":"positive regulation of IL-15 production","type":"exact"},{"name":"positive regulation of interleukin-15 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-15 production","type":"narrow"},{"name":"up regulation of interleukin-15 production","type":"exact"},{"name":"up-regulation of interleukin-15 production","type":"exact"},{"name":"upregulation of interleukin-15 production","type":"exact"}],"termid":"GO:0032738"}


id: PR:000044738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at position 2 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:28367989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S2)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 5 (Schizosaccharomyces pombe)","type":"exact"},{"name":"S2P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:5","type":"exact"},{"name":"rpb1/Phos(CTD-S2)","type":"exact"}],"termid":"PR:000044738"}


id: GO:0017059
data:
  {"annotated_genes":["SJAG_02305","SJAG_02706","SJAG_01857","SJAG_04550","SJAG_00880","SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88907,89685,93045,98292,101658,102102],"is_not":false,"summary":null,"term":"GO:0017059"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyses the condensation of L-serine with palmitoyl-CoA to form 3-ketosphinganine, the sphingoid base which is the starting point for all sphingolipids. In bacteria the enzyme is a cytoplasmic homodimer, whereas in eukaryotes the enzyme is a multiprotein complex localised to the endoplasmic reticulum. The eukaryotic complex consists of catalytic components (SPTLC1, SPTLC2 and SPTLC3 in humans; LCB1 and LCB2 in S. cerevisiae) and regulatory components, which include activators (SPTSSA/SPTSSB in humans, TSC3 in S. cerevisiae) and negative regulators (ORMDL1/ORMDL2/ORMDL3 in humans, ORM1/2 in S. cerevisiae ).","definition_xrefs":["PMID:29863195","PMID:33558761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase complex","termid":"GO:0002178"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01857":null,"SJAG_02305":null,"SJAG_02706":null,"SJAG_04178":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"serine palmitoyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SPOTS complex","type":"related"},{"name":"SPT","type":"related"},{"name":"serine C-palmitoyltransferase complex","type":"related"},{"name":"serine palmitoyltransferase, Orm1/2, Tsc3 and Sac1 complex","type":"related"}],"termid":"GO:0017059","terms_by_termid":{"GO:0017059":null}}


id: PBO:0082014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zw10 kinetochore protein","termid":"PBO:0082014"}


id: GO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide production","termid":"GO:0002788"},{"relation_name":"negatively_regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antifungal peptide production","synonyms":[{"name":"down regulation of antifungal peptide production","type":"exact"},{"name":"down-regulation of antifungal peptide production","type":"exact"},{"name":"downregulation of antifungal peptide production","type":"exact"},{"name":"inhibition of antifungal peptide production","type":"narrow"}],"termid":"GO:0002789"}


id: PBO:0004826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Lea1 (predicted)","termid":"PBO:0004826"}


id: GO:0008970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylcholine + H2O = 2-acylglycerophosphocholine + a carboxylate.","definition_xrefs":["EC:3.1.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phospholipase A1 activity","secondary_identifiers":["MetaCyc:PHOSPHOLIPASE-A1-RXN","Reactome:R-HSA-1482827","Reactome:R-HSA-1482828","Reactome:R-HSA-1482920","Reactome:R-HSA-1482847","Reactome:R-HSA-1482892","RHEA:18689","Reactome:R-HSA-1482862","Reactome:R-HSA-1482932","Reactome:R-HSA-5694485"],"synonyms":[{"name":"phosphatidylcholine 1-acylhydrolase activity","type":"exact"}],"termid":"GO:0008970"}


id: PBO:0074487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 4","termid":"PBO:0074487"}


id: PBO:0045826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 16","termid":"PBO:0045826"}


id: RO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has subsequence","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"is_bound_by_sequence_of","termid":"RO:0002523"},{"relation_name":"is_a","term_name":"overlaps_sequence_of","termid":"RO:0002526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_subsequence_of","termid":"RO:0002525"}


id: PBO:0056308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 4","termid":"PBO:0056308"}


id: PBO:0081895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 846","termid":"PBO:0081895"}


id: PBO:0031743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_invasive_growth_(obsolete_FYPO:0000466)","termid":"PBO:0031743"}


id: GO:0000154
data:
  {"annotated_genes":["SJAG_01172","SJAG_02281","SJAG_01877","SJAG_03713","SJAG_00083","SJAG_03773","SJAG_02350","SJAG_02821","SJAG_02024","SJAG_03008","SJAG_00744","SJAG_00722","SJAG_03572","SJAG_03410","SJAG_00943","SJAG_03877","SJAG_02377","SJAG_04754","SJAG_04890","SJAG_03332","SJAG_01234","SJAG_02417","SJAG_03016","SJAG_03289","SJAG_00566","SJAG_03755","SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88406,102345,87343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000455"},{"annotations":[92360,91040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[88737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904812"},{"annotations":[109750,87457,91763,112336,91328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070475"},{"annotations":[94993,59137,63120,105227,94549,64993,63720,85785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031167"},{"annotations":[91494,97295,86165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031118"},{"annotations":[107474,106330,90266,94927,104221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"},{"annotations":[102404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000454"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"},{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_00722":null,"SJAG_00744":null,"SJAG_00943":null,"SJAG_01172":null,"SJAG_01234":null,"SJAG_01877":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_02417":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03410":null,"SJAG_03572":null,"SJAG_03713":null,"SJAG_03755":null,"SJAG_03773":null,"SJAG_03877":null,"SJAG_04754":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"rRNA modification","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0016548"],"synonyms":[{"name":"rRNA editing","type":"narrow"}],"termid":"GO:0000154","terms_by_termid":{"GO:0000452":null,"GO:0000454":null,"GO:0000455":null,"GO:0031118":null,"GO:0031167":null,"GO:0070475":null,"GO:0070476":null,"GO:1904812":null}}


id: PBO:0073991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 5","termid":"PBO:0073991"}


id: GO:0035959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the glyoxylate cycle by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:11024040","GOC:dgf","PMID:19686338","PMID:17875938"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035959)","synonyms":[{"name":"positive regulation of glyoxylate bypass by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035959"}


id: PBO:0063980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 14","termid":"PBO:0063980"}


id: PBO:0003691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp2","termid":"PBO:0003691"}


id: PBO:0059760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 34","termid":"PBO:0059760"}


id: PBO:0027926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_nitrogen_starvation_in_h-_cells","termid":"PBO:0027926"}


id: GO:0010473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-galactose + myo-inositol 1-phosphate = alpha-L-galactose-1-phosphate + GDP-myoinositol.","definition_xrefs":["PMID:17485667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity","termid":"GO:0010473"}


id: GO:0070101
data:
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wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_04522","SJAG_00118","SJAG_01143","SJAG_03118","SJAG_03689","SJAG_04280","SJAG_00871","SJAG_04464"],"name":"cellular physical quality phenotype during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_03689","SJAG_03453","SJAG_03940","SJAG_03250","SJAG_01745","SJAG_03575","SJAG_01956","SJAG_03581","SJAG_01794","SJAG_02819","SJAG_04703","SJAG_01906","SJAG_00426","SJAG_03351","SJAG_02592","SJAG_00409","SJAG_04464","SJAG_04332","SJAG_00266","SJAG_02392","SJAG_04522","SJAG_00118","SJAG_04697","SJAG_01834","SJAG_01143","SJAG_04312","SJAG_04280","SJAG_02013","SJAG_00514","SJAG_00028","SJAG_03048","SJAG_03449","SJAG_04551","SJAG_02763"],"single_locus_genotype_uniquenames":["gpd1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","efc25delta","sty1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","gef1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","man1delta","pom1delta","ned1delta","scd1delta","lem2delta","gms1delta","nem2delta","pom152delta","rga4delta","mid1delta","mid2delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","dcr1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","pyp1delta","scd2delta","for3delta","atf1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","pka1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","pmk1delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta","rga6delta","ras1delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cellular physical object quality phenotype during vegetative growth","type":"exact"},{"name":"cellular physical quality phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular physical object quality phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0001321","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000356":null,"FYPO:0000648":null,"FYPO:0001122":null,"FYPO:0001327":null,"FYPO:0001369":null,"FYPO:0001489":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001877":null,"FYPO:0002026":null,"FYPO:0002227":null,"FYPO:0002380":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003751":null,"FYPO:0003779":null,"FYPO:0003780":null,"FYPO:0003976":null,"FYPO:0004205":null,"FYPO:0004295":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004695":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0006433":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0035749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_telomere_during_vegetative_growth","termid":"PBO:0035749"}


id: MOD:01528
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01528"}


id: GO:0003413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the development of a bone. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte differentiation","termid":"GO:0002062"},{"relation_name":"part_of","term_name":"cartilage development involved in endochondral bone morphogenesis","termid":"GO:0060351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte differentiation involved in endochondral bone morphogenesis","termid":"GO:0003413"}


id: PBO:0002676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin Phb1 (predicted)","termid":"PBO:0002676"}


id: GO:0070229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte death by apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte apoptotic process","termid":"GO:0070228"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte apoptotic process","termid":"GO:2000107"},{"relation_name":"negatively_regulates","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte apoptotic process","synonyms":[{"name":"down regulation of lymphocyte apoptosis","type":"exact"},{"name":"down-regulation of lymphocyte apoptosis","type":"exact"},{"name":"downregulation of lymphocyte apoptosis","type":"exact"},{"name":"inhibition of lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of lymphocyte apoptosis","type":"narrow"}],"termid":"GO:0070229"}


id: GO:0047981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidine + acetyl-CoA = N(alpha)-acetyl-L-histidine + CoA + H+.","definition_xrefs":["RHEA:24596","EC:2.3.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"histidine N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01160","MetaCyc:HISTIDINE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:L-histidine N-acetyltransferase activity","type":"related"},{"name":"acetylhistidine synthetase activity","type":"related"},{"name":"histidine acetyltransferase activity","type":"related"}],"termid":"GO:0047981"}


id: PBO:0046056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit G","termid":"PBO:0046056"}


id: PBO:0082914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome b2 (L-lactate cytochrome-c oxidoreductase); component of the mitochondrial intermembrane space, required for lactate utilization; expression is repressed by glucose and anaerobic conditions","termid":"PBO:0082914"}


id: GO:0140451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secreted multiprotein complex composed of 4 proteins, regulating group size during aggregation in cooperative development. An example of this complex is found in Dictyostelium discoideum.","definition_xrefs":["PMID:16963635","PMID:12117815","PMID:18426773","PMID:10444594","PMID:12912898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"counting factor complex","termid":"GO:0140451"}


id: PBO:0041080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRICK1 pseudogene 1","termid":"PBO:0041080"}


id: GO:1905044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","GOC:BHF","PMID:22393241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"}


id: PBO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec10","termid":"PBO:0002457"}


id: PBO:0028667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0028667"}


id: SO:0000828
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a nucleus.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"nuclear_sequence","termid":"SO:0000738"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear_chromosome","synonyms":[{"name":"nuclear chromosome","type":"exact"}],"termid":"SO:0000828"}


id: GO:0043830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fumarate + coenzyme M + coenzyme B = succinate + coenzyme M + coenzyme B + heterodisulfide.","definition_xrefs":["PMID:2509466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"thiol-driven fumarate reductase activity","secondary_identifiers":["EC:1.3.99.-"],"termid":"GO:0043830"}


id: GO:0070046
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 3 (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-3 complex","synonyms":[{"name":"SNARE complex (Stx3, Snap25, Vamp2)","type":"narrow"},{"name":"Stx3-Snap25-Vamp2 complex","type":"narrow"}],"termid":"GO:0070046"}


id: PBO:0075950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 5 pseudogene","termid":"PBO:0075950"}


id: PBO:0081879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 826, pseudogene","termid":"PBO:0081879"}


id: GO:0016240
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90766],"is_not":false,"summary":null,"term":"GO:0016240"}]},"cv_name":"biological_process","definition":"The initial attachment of an autophagosome membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane. Docking requires only that the two membranes come close enough for these proteins to interact and adhere.","definition_xrefs":["GOC:autophagy","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"},{"relation_name":"part_of","term_name":"autophagosome maturation","termid":"GO:0097352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0140056","GO:0008150","GO:0006914","GO:0051179","GO:0044248"],"is_obsolete":false,"name":"autophagosome membrane docking","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"autophagic vacuole docking","type":"exact"}],"termid":"GO:0016240","terms_by_termid":{"GO:0016240":null}}


id: PBO:0062494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 10 pseudogene","termid":"PBO:0062494"}


id: GO:1900368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of post-transcriptional gene silencing by a non-coding RNA.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:22412382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing","termid":"GO:0060147"},{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"regulates","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of post-transcriptional gene silencing by regulatory ncRNA","synonyms":[{"name":"regulation of PTGS","type":"exact"},{"name":"regulation of RNA interference","type":"exact"},{"name":"regulation of RNAi","type":"exact"},{"name":"regulation of post-transcriptional gene silencing by RNA","type":"related"},{"name":"regulation of post-transcriptional gene silencing by ncRNA","type":"related"}],"termid":"GO:1900368"}


id: PBO:0018264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex SMC subunit Smc4","termid":"PBO:0018264"}


id: PBO:0078582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 55","termid":"PBO:0078582"}


id: GO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + O2 = N-formyl-L-kynurenine.","definition_xrefs":["EC:1.13.11.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tryptophan 2,3-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-198563","GO:0004426","MetaCyc:TRYPTOPHAN-23-DIOXYGENASE-RXN","Reactome:R-HSA-71188","Reactome:R-HSA-888614","RHEA:24536"],"synonyms":[{"name":"L-tryptophan 2,3-dioxygenase activity","type":"related"},{"name":"L-tryptophan pyrrolase activity","type":"related"},{"name":"L-tryptophan:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"TDO","type":"related"},{"name":"indolamine 2,3-dioxygenase activity","type":"broad"},{"name":"indoleamine-pyrrole 2,3-dioxygenase activity","type":"exact"},{"name":"tryptamin 2,3-dioxygenase activity","type":"related"},{"name":"tryptamine 2,3-dioxygenase activity","type":"related"},{"name":"tryptophan oxygenase activity","type":"broad"},{"name":"tryptophan peroxidase activity","type":"broad"},{"name":"tryptophan pyrrolase activity","type":"broad"}],"termid":"GO:0004833"}


id: PBO:0044112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 75","termid":"PBO:0044112"}


id: GO:0141149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of nitric oxide-cGMP mediated signal transduction.","definition_xrefs":["PMID:35931019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitric oxide mediated signal transduction","termid":"GO:0010749"},{"relation_name":"is_a","term_name":"regulation of cGMP-mediated signaling","termid":"GO:0010752"},{"relation_name":"regulates","term_name":"nitric oxide-cGMP-mediated signaling","termid":"GO:0038060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141149"}


id: PBO:0042699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 1","termid":"PBO:0042699"}


id: PBO:0046928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member B","termid":"PBO:0046928"}


id: PBO:0004211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK inhibitor Rum1","termid":"PBO:0004211"}


id: PBO:0041931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 2","termid":"PBO:0041931"}


id: GO:1902704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to acetone.","definition_xrefs":["GOC:mengo_curators","PMID:18727018","GOC:TermGenie","GO_REF:0000093","PMID:19539744"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to acetone (obsolete GO:1902704)","synonyms":[{"name":"hexose breakdown to acetone","type":"exact"},{"name":"hexose catabolic process to 2-propanone","type":"exact"},{"name":"hexose catabolism to acetone","type":"exact"},{"name":"hexose degradation to acetone","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902704"}


id: GO:0051347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transferase activity","synonyms":[{"name":"activation of transferase activity","type":"narrow"},{"name":"stimulation of transferase activity","type":"narrow"},{"name":"transferase activator","type":"exact"},{"name":"up regulation of transferase activity","type":"exact"},{"name":"up-regulation of transferase activity","type":"exact"},{"name":"upregulation of transferase activity","type":"exact"}],"termid":"GO:0051347"}


id: GO:0033093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, elongated, rod-shaped secretory granule characteristic of vascular endothelial cells that contain a number of structurally and functionally distinct proteins, of which the best characterized are von Willebrand factor (VWF) and P-selectin. Weibel-Palade bodies are formed from the trans-Golgi network in a process that depends on VWF, which is densely packed in a highly organized manner, and on coat proteins that remain associated with the granules. Upon cell stimulation, regulated exocytosis releases the contained proteins to the cell surface, where they act in the recruitment of platelets and leukocytes and in inflammatory and vasoactive responses.","definition_xrefs":["PMID:16087708","PMID:11935287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"},{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Weibel-Palade body","secondary_identifiers":["Wikipedia:Weibel-Palade_body"],"termid":"GO:0033093"}


id: PBO:0054316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1708","termid":"PBO:0054316"}


id: GO:0102115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-gamma-D-isoglutaminyl-N-(beta-D-asparatyl)-L-lysyl-D-alanyl-D-alanine + ammonium + ATP = H+ + ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-gamma-D-isoglutaminyl-N-(beta-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:6.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptidoglycan asparagine synthase activity","secondary_identifiers":["MetaCyc:RXN-11338"],"termid":"GO:0102115"}


id: PBO:0038829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 2","termid":"PBO:0038829"}


id: GO:0030670
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a phagocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"phagocytic vesicle membrane","synonyms":[{"name":"phagosome membrane","type":"exact"}],"termid":"GO:0030670"}


id: FYPO:0007195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mitochondria are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"large mitochondria","synonyms":[{"name":"enlarged mitochondria","type":"exact"},{"name":"large mitochondria during mitotic cell cycle","type":"related"},{"name":"large mitochondria during vegetative growth","type":"exact"}],"termid":"FYPO:0007195"}


id: PBO:0068931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 174, pseudogene","termid":"PBO:0068931"}


id: GO:0019075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The refolding and structural rearrangements of virion parts to transition from the intermediate virion to the more mature virion. Maturation usually involves proteolysis events and changes in the folding of the virion proteins. Can occur inside the host cell or after release.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus maturation","synonyms":[{"name":"bacteriophage maturation","type":"narrow"},{"name":"viral maturation","type":"exact"}],"termid":"GO:0019075"}


id: PR:Q9UUE3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17G9.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUE3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine N-acyltransferase C17G9.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.06c","synonyms":[{"name":"Spom972h-SPBC17G9.06c","type":"exact"}],"termid":"PR:Q9UUE3"}


id: PBO:0069273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 529, pseudogene","termid":"PBO:0069273"}


id: FYECO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which inositol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ inositol","termid":"FYECO:0000064"}


id: GO:0001113
data:
  {"annotated_genes":["SJAG_00116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93757],"is_not":false,"summary":null,"term":"GO:0001113"}]},"cv_name":"biological_process","definition":"Any process involved in the melting of the DNA hybrid of the core promoter region within the transcriptional closed complex of an RNA polymerase II preinitiation complex (PIC) to produce an open complex where the DNA duplex around the transcription initiation site is unwound to form the transcription bubble.","definition_xrefs":["PMID:18280161","GOC:txnOH","PMID:15020047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription open complex formation","termid":"GO:0001112"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00116":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transcription open complex formation at RNA polymerase II promoter","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II promoter melting","type":"exact"},{"name":"transcriptional open complex formation at RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001113","terms_by_termid":{"GO:0001113":null}}


id: PR:O74512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.02","synonyms":[{"name":"Spom972h-wtf14","type":"exact"}],"termid":"PR:O74512"}


id: FYPO:0005128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from middle meiotic genes measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth). Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:mah","PomBase:al","PMID:17927811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased level of middle meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of middle meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of middle meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of middle meiotic gene mRNA during vegetative growth during mitotic cell cycle","type":"related"},{"name":"increased level of middle meiotic gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005128"}


id: PBO:0031900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level, annotation_extension=during(GO:0000090)","termid":"PBO:0031900"}


id: GO:0038025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the secreted glycoprotein reelin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:12827279","GOC:bf","PMID:20223215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"reelin receptor activity","synonyms":[{"name":"reeler receptor activity","type":"exact"}],"termid":"GO:0038025"}


id: PBO:0003484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide N-glycanase (predicted)","termid":"PBO:0003484"}


id: PBO:0040918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 22","termid":"PBO:0040918"}


id: GO:0008084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an imaginal disc growth factor receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"imaginal disc growth factor receptor binding","synonyms":[{"name":"imaginal disc growth factor","type":"narrow"}],"termid":"GO:0008084"}


id: PBO:0065304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 21","termid":"PBO:0065304"}


id: PATO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having three rays or radiating branches.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triradiate","termid":"PATO:0002391"}


id: _global:contained_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X contained_by Y iff X starts after start of Y and X ends before end of Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contained_by","termid":"_global:contained_by"}


id: PBO:0074956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-7","termid":"PBO:0074956"}


id: PBO:0017535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lgl family protein Sro7 (predicted)","termid":"PBO:0017535"}


id: GO:0061436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the epithelial barrier, the functional barrier in the skin that limits its permeability.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin epidermis development","termid":"GO:0098773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of skin barrier","synonyms":[{"name":"epithelial barrier development","type":"related"},{"name":"establishment of epithelial barrier","type":"broad"},{"name":"skin barrier development","type":"related"}],"termid":"GO:0061436"}


id: GO:0090557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of a barrier between endothelial cell layers of the intestine to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.","definition_xrefs":["GOC:krc","PMID:22155109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of endothelial intestinal barrier","termid":"GO:0090557"}


id: PBO:0090473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II, and III complex subunit Trs23","termid":"PBO:0090473"}


id: PBO:0055670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lines homolog 1","termid":"PBO:0055670"}


id: PBO:0046552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 6","termid":"PBO:0046552"}


id: GO:1905551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to endoplasmic reticulum.","definition_xrefs":["PMID:22768340","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to endoplasmic reticulum","termid":"GO:1905550"},{"relation_name":"negatively_regulates","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to endoplasmic reticulum","synonyms":[{"name":"down regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"down regulation of protein localization in ER","type":"exact"},{"name":"down regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"down regulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"down-regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"down-regulation of protein localization in ER","type":"exact"},{"name":"down-regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"down-regulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"downregulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"downregulation of protein localization in ER","type":"exact"},{"name":"downregulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"downregulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"inhibition of protein localisation in endoplasmic reticulum","type":"narrow"},{"name":"inhibition of protein localization in ER","type":"narrow"},{"name":"inhibition of protein localization in endoplasmic reticulum","type":"narrow"},{"name":"inhibition of protein localization to endoplasmic reticulum","type":"narrow"},{"name":"negative regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"negative regulation of protein localization in ER","type":"exact"},{"name":"negative regulation of protein localization in endoplasmic reticulum","type":"exact"}],"termid":"GO:1905551"}


id: PBO:0044766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExD-box helicase 50","termid":"PBO:0044766"}


id: PBO:0030808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_cortex","termid":"PBO:0030808"}


id: PomGeneEx:0000002
data:
  {"annotated_genes":["SJAG_00118","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"qualitative_gene_expression":[{"annotations":[115503,115522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"PomGeneEx:0000011"}]},"cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at a higher level or produced at a faster rate under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null},"genotype_count":0,"is_obsolete":false,"name":"increased","references_by_uniquename":{"PMID:25866389":null},"synonyms":[{"name":"gene expression increased","type":"exact"},{"name":"gene product level increased","type":"exact"}],"termid":"PomGeneEx:0000002","terms_by_termid":{"GO:0000087":null,"PomGeneEx:0000011":null}}


id: PBO:0042498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 18","termid":"PBO:0042498"}


id: PBO:0055635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3074","termid":"PBO:0055635"}


id: GO:0015704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cyanate, NCO-, the anion of cyanic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"one-carbon compound transport","termid":"GO:0019755"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cyanate transport","termid":"GO:0015704"}


id: GO:0061663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of NEDD8 to a substrate protein via the reaction X-NEDD8 + S = X + S-NEDD8, where X is either an E2 or E3 enzyme, the X-NEDD8 linkage is a thioester bond, and the S-NEDD8 linkage is an isopeptide bond between the C-terminal amino acid of NEDD8 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NEDD8 transferase activity","termid":"GO:0019788"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0140096","GO:0019787","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"NEDD8 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061663"}


id: PR:O14185
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- stg1 gene.","definition_xrefs":["UniProtKB:O14185","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.10c","synonyms":[{"name":"Spom972h-stg1","type":"exact"},{"name":"calponin homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14185"}


id: GO:1901514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + lipo-chitin oligosaccharide(in) = ADP + phosphate + lipo-chitin oligosaccharide(out).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"},{"relation_name":"is_a","term_name":"lipo-chitin oligosaccharide transmembrane transporter activity","termid":"GO:1901513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled lipo-chitin oligosaccharide transmembrane transporter activity","synonyms":[{"name":"lipo-chitin oligosaccharide transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:1901514"}


id: GO:0008546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Physical interaction between microtubules and chromatin via DNA binding proteins.","definition_xrefs":["PMID:10322137"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule/chromatin interaction (obsolete GO:0008546)","synonyms":[{"name":"microtubule/chromatin interaction","type":"exact"}],"termid":"GO:0008546"}


id: PBO:0004199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0A (p40)","termid":"PBO:0004199"}


id: PBO:0044321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 1","termid":"PBO:0044321"}


id: GO:1990448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an exon-exon junction complex, a protein complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.","definition_xrefs":["GOC:sart","PMID:24967911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"exon-exon junction complex binding","synonyms":[{"name":"EJC binding","type":"exact"}],"termid":"GO:1990448"}


id: GO:0000348
data:
  {"annotated_genes":["SJAG_03995"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99345],"is_not":false,"summary":null,"term":"GO:0000348"}]},"cv_name":"biological_process","definition":"Recognition of the pre-mRNA branch site sequence by components of the assembling spliceosome.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mRNA branch site recognition","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000371","GO:0000370"],"synonyms":[{"name":"U12-type nuclear mRNA branch site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA branch site recognition","type":"narrow"},{"name":"nuclear mRNA branch site recognition","type":"exact"},{"name":"spliceosomal A complex biosynthesis","type":"narrow"},{"name":"spliceosomal A complex formation","type":"narrow"},{"name":"spliceosomal B complex biosynthesis","type":"narrow"},{"name":"spliceosomal B complex formation","type":"narrow"}],"termid":"GO:0000348","terms_by_termid":{"GO:0000348":null}}


id: PBO:0070239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 179 pseudogene","termid":"PBO:0070239"}


id: PBO:0061557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase domain containing 1","termid":"PBO:0061557"}


id: PBO:0061564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' nucleotidase, ecto-like, pseudogene","termid":"PBO:0061564"}


id: PR:O94529
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A FACT complex subunit SSRP1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03592","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit pob3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.05","secondary_identifiers":["UniProtKB:O94529"],"synonyms":[{"name":"Spom972h-SSRP1","type":"exact"},{"name":"facilitates chromatin transcription complex subunit pob3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94529"}


id: GO:0010450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an inflorescence meristem, a population of undifferentiated cells in a plant shoot which produces small leaves and then floral meristems, which will give rise to flowers.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"meristem growth","termid":"GO:0035266"},{"relation_name":"part_of","term_name":"inflorescence development","termid":"GO:0010229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflorescence meristem growth","termid":"GO:0010450"}


id: PBO:0069285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 541, pseudogene","termid":"PBO:0069285"}


id: MOD:01914
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.","definition_xrefs":["PubMed:17516569","Unimod:907","PMID:743239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-hydroxy-L-lysine","termid":"MOD:00037"},{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"galactosylated residue","termid":"MOD:00476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O5-galactosyl-L-hydroxylysine","synonyms":[{"name":"CARBOHYD O-linked (Gal) hydroxylysine","type":"exact"},{"name":"Galactosyl hydroxylysine","type":"related"},{"name":"OGal5HyLys","type":"exact"}],"termid":"MOD:01914"}


id: FYPO:0006741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is greater than normal at promoters containing one or more MluI cell cycle box factor elements (MCBs). Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:30134042","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in euchromatin","termid":"FYPO:0000854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased nucleosome occupancy at MCB promoters","synonyms":[{"name":"increased nucleosome occupancy at MCB promoter during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at MCB promoter during vegetative growth","type":"exact"},{"name":"increased nucleosome occupancy at MCB promoters target genes","type":"related"}],"termid":"FYPO:0006741"}


id: GO:0071700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory placode to attain its fully functional state. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"olfactory placode development","termid":"GO:0071698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode maturation","termid":"GO:0071700"}


id: PR:Q09837
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.12c","secondary_identifiers":["UniProtKB:Q09837"],"synonyms":[{"name":"GPI mannosyltransferase IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGZ","type":"exact"}],"termid":"PR:Q09837"}


id: PBO:0039920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF18 antisense RNA 1","termid":"PBO:0039920"}


id: GO:0042893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of polymyxin, any of a group of related antibiotics produced by Bacillus polymyxa and active against most Gram-negative bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"polymyxin transport","termid":"GO:0042893"}


id: GO:0045977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of progression through the embryonic mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"positively_regulates","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle, embryonic","synonyms":[{"name":"activation of mitotic cell cycle, embryonic","type":"narrow"},{"name":"positive regulation of embryonic mitotic cell cycle","type":"exact"},{"name":"positive regulation of embryonic mitotic cell cycle progression","type":"exact"},{"name":"positive regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"stimulation of mitotic cell cycle, embryonic","type":"narrow"},{"name":"up regulation of mitotic cell cycle, embryonic","type":"exact"},{"name":"up-regulation of mitotic cell cycle, embryonic","type":"exact"},{"name":"upregulation of mitotic cell cycle, embryonic","type":"exact"}],"termid":"GO:0045977"}


id: GO:0031100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a lost or destroyed animal organ.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ regeneration","termid":"GO:0031100"}


id: PBO:0040762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin 2","termid":"PBO:0040762"}


id: PBO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rsd1 (predicted)","termid":"PBO:0002338"}


id: GO:1905681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of innate immunity memory response.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"regulation of innate immunity memory response","termid":"GO:1905680"},{"relation_name":"negatively_regulates","term_name":"innate immunity memory response","termid":"GO:0090714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of innate immunity memory response","synonyms":[{"name":"down regulation of innate immunity memory response","type":"exact"},{"name":"down-regulation of innate immunity memory response","type":"exact"},{"name":"downregulation of innate immunity memory response","type":"exact"},{"name":"inhibition of innate immunity memory response","type":"narrow"}],"termid":"GO:1905681"}


id: GO:0043897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.133-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan alpha-maltohydrolase activity","type":"exact"},{"name":"glucan-1,4-alpha-maltohydrolase activity","type":"exact"},{"name":"maltogenic alpha-amylase activity","type":"exact"}],"termid":"GO:0043897"}


id: PBO:0015244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase non-catalytic Sm-like domain subunit Naa38 (predicted)","termid":"PBO:0015244"}


id: PBO:0005104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar SNARE Vam7 (predicted)","termid":"PBO:0005104"}


id: GO:0035814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal sodium excretion","termid":"GO:0035813"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}


id: GO:0034140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 3 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 3 signaling pathway","termid":"GO:0034139"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 3 signaling pathway","termid":"GO:0034138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 3 signaling pathway","synonyms":[{"name":"negative regulation of TLR3 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 3 signalling pathway","type":"exact"}],"termid":"GO:0034140"}


id: GO:0047628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + thymidine = AMP + thymidine 5'-phosphate.","definition_xrefs":["EC:2.7.1.118","MetaCyc:ADP--THYMIDINE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ADP-thymidine kinase activity","secondary_identifiers":["RHEA:13413"],"synonyms":[{"name":"ADP:dThd phosphotransferase activity","type":"related"},{"name":"ADP:thymidine 5'-phosphotransferase activity","type":"related"},{"name":"adenosine diphosphate-thymidine phosphotransferase activity","type":"related"}],"termid":"GO:0047628"}


id: GO:0102523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-chloropropanoate + NADP = 2-chloroacrylate + NADPH + H+.","definition_xrefs":["EC:1.3.1.103","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-chloroacrylate reductase activity","secondary_identifiers":["MetaCyc:RXN-14536","RHEA:36591"],"termid":"GO:0102523"}


id: GO:1990584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of accessory proteins (cardiac troponin T, cardiac troponin I and cardiac troponin C) found associated with actin in cardiac muscle thin filaments; involved in calcium regulation important for muscle contraction.","definition_xrefs":["GOC:ame","PMID:12840750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"troponin complex","termid":"GO:0005861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0015629","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cardiac Troponin complex","synonyms":[{"name":"cTnC:cTnI:cTnT","type":"related"}],"termid":"GO:1990584"}


id: PBO:0074733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 91","termid":"PBO:0074733"}


id: PBO:0061510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 ribosome biogenesis factor","termid":"PBO:0061510"}


id: PBO:0042450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 3","termid":"PBO:0042450"}


id: GO:0140740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginyl-[protein] + NAD+ = ADP-riboxanated L-argininyl-[protein] + H+ + NH4(+) + nicotinamide.","definition_xrefs":["PMID:34671164","RHEA:69500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"},{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140096","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ADP-riboxanase activity","termid":"GO:0140740"}


id: FYPO:0004576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PMID:25398909","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0001442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 acetylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3-K9 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 acetylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 acetylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased subtelomeric histone H3K9 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004576"}


id: PBO:0070705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 10","termid":"PBO:0070705"}


id: FYPO:0004191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydroxyurea is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to hydroxyurea","synonyms":[{"name":"increased RNA accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased RNA level during cellular response to HU","type":"exact"},{"name":"increased RNA level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to hydroxyurea","type":"narrow"},{"name":"increased transcript level during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004191"}


id: PBO:0003548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apm3 (predicted)","termid":"PBO:0003548"}


id: PR:O43056
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A homoserine kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03580","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.03","secondary_identifiers":["UniProtKB:O43056"],"synonyms":[{"name":"HK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HSK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-thrB","type":"exact"}],"termid":"PR:O43056"}


id: PBO:0086565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR320W is not an essential gene","termid":"PBO:0086565"}


id: PomGeneEx:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRD","definition":"A qualifier that indicates that the fraction of ribosomes that are translating each codon of an mRNA is higher under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PMID:29432178","PMID:33313903","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased","termid":"PomGeneEx:0000002"},{"relation_name":"is_a","term_name":"ribosomal density","termid":"PomGeneEx:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal density increased","synonyms":[{"name":"increased ribosomal density","type":"exact"},{"name":"ribosome density increased","type":"exact"},{"name":"ribosome occupancy increased","type":"exact"}],"termid":"PomGeneEx:0000026"}


id: PBO:0041437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 43","termid":"PBO:0041437"}


id: PBO:0051975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IZUMO family member 2","termid":"PBO:0051975"}


id: GO:0045503
data:
  {"annotated_genes":["SJAG_02561"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76181],"is_not":false,"summary":null,"term":"GO:0045503"}]},"cv_name":"molecular_function","definition":"Binding to a light chain of the dynein complex.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02561":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dynein light chain binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0045503","terms_by_termid":{"GO:0045503":null}}


id: PBO:0059721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 29","termid":"PBO:0059721"}


id: GO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the clotting cascade of blood coagulation, a cascade of plasma enzymes that is triggered following damage to blood vessels, leading to formation of a clot.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"part_of","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of blood coagulation via clotting cascade","synonyms":[{"name":"activation of clotting cascade","type":"exact"}],"termid":"GO:0002543"}


id: MOD:00454
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a quaternary amine reagent heavy (+3amu) form group.","definition_xrefs":["PubMed:11857757","Unimod:61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+3amu) (N-term & K)","synonyms":[{"name":"GIST-Quat:2H(3)","type":"related"},{"name":"Quaternary amine labeling reagent heavy (+3amu) form, N-term & K","type":"related"}],"termid":"MOD:00454"}


id: PBO:0078547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 38","termid":"PBO:0078547"}


id: PBO:0089101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rbm10","termid":"PBO:0089101"}


id: GO:0035736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to compound eye morphogenesis.","definition_xrefs":["GOC:bf","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}


id: PBO:0084643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule-associated protein involved in microtubule organization; involved in assembly and stabilization of microtubules; overproduction results in cell cycle arrest at G2 phase; similar to Drosophila protein MAP and to mammalian MAP4 proteins","termid":"PBO:0084643"}


id: PBO:0067611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 783, pseudogene","termid":"PBO:0067611"}


id: GO:0016124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"xanthophyll catabolic process","synonyms":[{"name":"xanthophyll breakdown","type":"exact"},{"name":"xanthophyll catabolism","type":"exact"},{"name":"xanthophyll degradation","type":"exact"}],"termid":"GO:0016124"}


id: PBO:0052811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 77","termid":"PBO:0052811"}


id: PBO:0035694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of,_negative_effect","termid":"PBO:0035694"}


id: PBO:0092020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine (uag), mitochondrial","termid":"PBO:0092020"}


id: GO:0002396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MHC protein complex.","definition_xrefs":["PMID:15771591","GOC:add","PMID:15928678","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"MHC protein complex assembly","termid":"GO:0002396"}


id: SO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (or regions) that includes all of the sequence elements necessary to encode a functional transcript. A gene may include regulatory regions, transcribed regions and/or other functional sequence regions.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"member_of","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Gene"],"synonyms":[{"name":"INSDC_feature:gene","type":"exact"}],"termid":"SO:0000704"}


id: PBO:0062769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily W member 1","termid":"PBO:0062769"}


id: GO:0016902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, disulfide, NAD, NADP, oxygen or a quinone or similar compound.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-OH group of donors, other acceptors (obsolete GO:0016902)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-OH group of donors, other acceptors","type":"exact"}],"termid":"GO:0016902"}


id: PBO:0088005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p (see also Ptc2p) to limit maximal kinase activity induced by osmotic stress; dephosphorylates T169 phosphorylated Cdc28p (see also Ptc2p); role in DNA damage checkpoint inactivation; PTC3 has a paralog, PTC2, that arose from the whole genome duplication","termid":"PBO:0088005"}


id: GO:0110163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic anaphase B (spindle phase three).","definition_xrefs":["GOC:vw","PMID:27697865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation (spindle phase three)","termid":"GO:0110162"},{"relation_name":"is_a","term_name":"negative regulation of mitotic spindle elongation","termid":"GO:1902845"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle elongation (spindle phase three)","termid":"GO:0061805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic spindle elongation (spindle phase three)","termid":"GO:0110163"}


id: SO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence that closely resembles a known functional gene, at another locus within a genome, that is non-functional as a consequence of (usually several) mutations that prevent either its transcription or translation (or both). In general, pseudogenes result from either reverse transcription of a transcript of their \\\"normal\\\" paralog (SO:0000043) (in which case the pseudogene typically lacks introns and includes a poly(A) tail) or from recombination (SO:0000044) (in which case the pseudogene is typically a tandem duplication of its \\\"normal\\\" paralog).","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"non_functional_homolog_of","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene","secondary_identifiers":["http://en.wikipedia.org/wiki/Pseudogene"],"synonyms":[{"name":"INSDC_feature:gene","type":"broad"},{"name":"INSDC_qualifier:pseudo","type":"exact"},{"name":"INSDC_qualifier:unknown","type":"exact"}],"termid":"SO:0000336"}


id: PBO:0046155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 3","termid":"PBO:0046155"}


id: PBO:0092008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit (15S) rRNA, rns","termid":"PBO:0092008"}


id: GO:1990535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a neuron projection in a stable functional or structural state. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["PMID:25359212","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection maintenance","synonyms":[{"name":"axon homeostasis","type":"related"},{"name":"axon maintenance","type":"related"},{"name":"neurite maintenance","type":"narrow"},{"name":"neuron process maintenance","type":"exact"},{"name":"neuron protrusion maintenance","type":"exact"},{"name":"neuronal cell projection maintenance","type":"exact"}],"termid":"GO:1990535"}


id: FYPO:0001490
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable and longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable elongated vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"elongated inviable cell during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell","type":"exact"},{"name":"inviable elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell","type":"exact"}],"termid":"FYPO:0001490","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0030839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_adenine_import","termid":"PBO:0030839"}


id: GO:0045301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA-(2-methylthio-N-6-isopentenyl adenosine) = tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine) + O2. 2-methylthio-N-6-isopentenyl adenosine is also known as ms2i6A; 2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine is also known as ms2io6A and 2-methylthio-cis-ribozeatin.","definition_xrefs":["PMID:8253666","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0140101","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity","synonyms":[{"name":"2-methylthio-cis-ribozeatin hydroxylase activity","type":"exact"},{"name":"tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyladenosine)-hydroxylase activity","type":"exact"},{"name":"tRNA-(ms2io6A)-hydroxylase activity","type":"exact"}],"termid":"GO:0045301"}


id: GO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When a branched chain family amino acid, leucine, isoleucine, or valine, is used as the substrate, 3-methylbutanoate, 2-methylbutanoate, or 2-methylpropanoate, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"branched-chain amino acid catabolic process to carboxylic acid via Ehrlich pathway","synonyms":[{"name":"branched chain family amino acid catabolic process to carboxylic acid via Ehrlich pathway","type":"exact"}],"termid":"GO:0000953"}


id: PBO:0068382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 183","termid":"PBO:0068382"}


id: PBO:0043512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 7","termid":"PBO:0043512"}


id: PBO:0108625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosome assembly protein Rsm2202, fusion protein","termid":"PBO:0108625"}


id: PBO:0051350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-40","termid":"PBO:0051350"}


id: PBO:0004794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sec13","termid":"PBO:0004794"}


id: GO:0070234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte apoptotic process","termid":"GO:0070230"},{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"positively_regulates","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell apoptotic process","synonyms":[{"name":"activation of T cell apoptosis","type":"narrow"},{"name":"positive regulation of T cell apoptosis","type":"narrow"},{"name":"positive regulation of T lymphocyte apoptosis","type":"exact"},{"name":"positive regulation of T-cell apoptosis","type":"exact"},{"name":"positive regulation of T-lymphocyte apoptosis","type":"exact"},{"name":"positive regulation of programmed cell death of T cells by apoptosis","type":"exact"},{"name":"stimulation of T cell apoptosis","type":"narrow"},{"name":"up regulation of T cell apoptosis","type":"exact"},{"name":"up-regulation of T cell apoptosis","type":"exact"},{"name":"upregulation of T cell apoptosis","type":"exact"}],"termid":"GO:0070234"}


id: PR:Q9UTR6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- och1 gene.","definition_xrefs":["UniProtKB:Q9UTR6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiation-specific alpha-1,6-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.05c","synonyms":[{"name":"Spom972h-och1","type":"exact"}],"termid":"PR:Q9UTR6"}


id: GO:0007307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Amplification by up to 60-fold of the loci containing the chorion gene clusters. Amplification is necessary for the rapid synthesis of chorion proteins by the follicle cells, and occurs by repeated firing of one or more origins located within each gene cluster.","definition_xrefs":["GOC:mtg_sensu","PMID:11157771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA amplification","termid":"GO:0006277"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"eggshell chorion gene amplification","termid":"GO:0007307"}


id: PBO:0030925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_long-chain_fatty_acid-CoA_ligase_activity","termid":"PBO:0030925"}


id: GO:0033157
data:
  {"annotated_genes":["SJAG_03048","SJAG_04343","SJAG_00906","SJAG_03453","SJAG_04464","SJAG_04312","SJAG_01805","SJAG_02592","SJAG_04509","SJAG_01245","SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84074,88151],"is_not":false,"summary":null,"term":"GO:0033157"},{"annotations":[101928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[104861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[97984,107141,89942,96575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[86991,98524,90511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of proteins within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"regulates","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intracellular protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033157","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0046827":null,"GO:0070863":null}}


id: MOD:00516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:148","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)","type":"related"},{"name":"Hex1HexNAc2","type":"related"}],"termid":"MOD:00516"}


id: PBO:0058779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7113","termid":"PBO:0058779"}


id: PBO:0013836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline transmembrane transporter family protein Ctl1","termid":"PBO:0013836"}


id: PBO:0045254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1","termid":"PBO:0045254"}


id: GO:0051253
data:
  {"annotated_genes":["SJAG_03319","SJAG_00802","SJAG_03081","SJAG_00441","SJAG_02858","SJAG_01331","SJAG_00290","SJAG_00266","SJAG_01230","SJAG_03067","SJAG_02385","SJAG_02752","SJAG_00142","SJAG_01707","SJAG_04825","SJAG_04268","SJAG_04607","SJAG_03883","SJAG_04512","SJAG_04186","SJAG_02104","SJAG_04039","SJAG_01199","SJAG_02255","SJAG_02898","SJAG_00926","SJAG_04312","SJAG_03448","SJAG_04946","SJAG_00996","SJAG_00797","SJAG_03696","SJAG_02846","SJAG_03143","SJAG_04249","SJAG_02573","SJAG_00124","SJAG_00163","SJAG_01311","SJAG_00987","SJAG_01728","SJAG_04381","SJAG_04586","SJAG_04026","SJAG_00410","SJAG_03911","SJAG_01680","SJAG_02981","SJAG_01254","SJAG_04539","SJAG_02444","SJAG_01799","SJAG_04584","SJAG_01157","SJAG_02730","SJAG_01804","SJAG_03845","SJAG_04921","SJAG_03283","SJAG_04613","SJAG_00792","SJAG_00861","SJAG_01000","SJAG_00969","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77715,96225,114417,86344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[102369,71044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"},{"annotations":[92392,85638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[104096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[97207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045892"},{"annotations":[85639,85244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[85943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[102422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902369"},{"annotations":[110706,102022,95020,87318,88268,100326,101143,102869,107270,83762,99695,85009,89522,92424,86204,97107,101929,102852,89914,90862,103125,105145,90368,97129,106856,100393,108223,109110,89420,110393,88291,112204,102612,113489,111755,102625,79300,104360,89874,100092,109969,90199,87391,90781,104702,90018,97982,104098,104584,102371,98916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[92532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[97130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[114042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[86784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"negatively_regulates","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":65,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00142":null,"SJAG_00163":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00410":null,"SJAG_00441":null,"SJAG_00792":null,"SJAG_00797":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00969":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01157":null,"SJAG_01199":null,"SJAG_01230":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01331":null,"SJAG_01680":null,"SJAG_01707":null,"SJAG_01728":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_02104":null,"SJAG_02255":null,"SJAG_02385":null,"SJAG_02444":null,"SJAG_02573":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02846":null,"SJAG_02858":null,"SJAG_02898":null,"SJAG_02981":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03143":null,"SJAG_03283":null,"SJAG_03319":null,"SJAG_03448":null,"SJAG_03473":null,"SJAG_03696":null,"SJAG_03845":null,"SJAG_03883":null,"SJAG_03911":null,"SJAG_04026":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04249":null,"SJAG_04268":null,"SJAG_04312":null,"SJAG_04381":null,"SJAG_04512":null,"SJAG_04539":null,"SJAG_04584":null,"SJAG_04586":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04825":null,"SJAG_04921":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA metabolic process","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA metabolic process","type":"exact"},{"name":"down-regulation of RNA metabolic process","type":"exact"},{"name":"downregulation of RNA metabolic process","type":"exact"},{"name":"inhibition of RNA metabolic process","type":"narrow"},{"name":"negative regulation of RNA metabolism","type":"exact"}],"termid":"GO:0051253","terms_by_termid":{"GO:0000122":null,"GO:0000433":null,"GO:0010621":null,"GO:0016480":null,"GO:0034244":null,"GO:0045892":null,"GO:0048255":null,"GO:0060195":null,"GO:0070935":null,"GO:0090669":null,"GO:0120271":null,"GO:1902369":null,"GO:1902373":null}}


id: PBO:0073066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 4","termid":"PBO:0073066"}


id: GO:0015098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of molybdate (MoO4 2-) ions from one side of a membrane to the other. Molybdate is the bivalent anion derived from molybdic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"molybdate ion transmembrane transporter activity","synonyms":[{"name":"molybdate transporter activity","type":"exact"}],"termid":"GO:0015098"}


id: FYPO:0002344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity phleomycin. Cells stop growing (and may die) at a concentration of phleomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to phleomycin","synonyms":[{"name":"hypersensitive to phleomycin","type":"exact"},{"name":"sensitive to phleomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to phleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0002344"}


id: PBO:0039476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18F, pseudogene","termid":"PBO:0039476"}


id: PBO:0060802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S6","termid":"PBO:0060802"}


id: PBO:0052932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-4","termid":"PBO:0052932"}


id: PBO:0086121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for expression of the mitochondrial OLI1 gene; mitochondrial OLI1 gene encodes subunit 9 of F1-F0 ATP synthase","termid":"PBO:0086121"}


id: PBO:0036254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA-binding protein (predicted)","termid":"PBO:0036254"}


id: PR:O13867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uracil phosphoribosyltransferase Upp that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.01c","secondary_identifiers":["UniProtKB:O13867"],"synonyms":[{"name":"Spom972h-upp","type":"exact"},{"name":"UMP pyrophosphorylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13867"}


id: PBO:0049095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 152","termid":"PBO:0049095"}


id: PBO:0072797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 3","termid":"PBO:0072797"}


id: PBO:0043674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 1B","termid":"PBO:0043674"}


id: PBO:0091789
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GCP2","termid":"PBO:0091789"}


id: FYPO:0007358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to heavy water (D2O). Cells stop growing (and may die) at a concentration of heavy water that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to heavy water","synonyms":[{"name":"hypersensitive to heavy water","type":"exact"},{"name":"sensitive to D2O","type":"exact"},{"name":"sensitive to dideuterium oxide","type":"exact"},{"name":"sensitive to heavy water during mitotic cell cycle","type":"related"},{"name":"sensitive to heavy water during vegetative growth","type":"exact"}],"termid":"FYPO:0007358"}


id: PBO:0031505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_K-252a","termid":"PBO:0031505"}


id: PBO:0060569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 5, pseudogene","termid":"PBO:0060569"}


id: PBO:0072754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 4","termid":"PBO:0072754"}


id: PBO:0047939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(13)(q21.2)","termid":"PBO:0047939"}


id: GO:1900891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pentadecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of pentadecane metabolic process","termid":"GO:1900890"},{"relation_name":"negatively_regulates","term_name":"pentadecane metabolic process","termid":"GO:1900633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pentadecane metabolic process","synonyms":[{"name":"down regulation of pentadecane metabolic process","type":"exact"},{"name":"down regulation of pentadecane metabolism","type":"related"},{"name":"down-regulation of pentadecane metabolic process","type":"exact"},{"name":"down-regulation of pentadecane metabolism","type":"related"},{"name":"downregulation of pentadecane metabolic process","type":"exact"},{"name":"downregulation of pentadecane metabolism","type":"related"},{"name":"inhibition of pentadecane metabolic process","type":"narrow"},{"name":"inhibition of pentadecane metabolism","type":"narrow"},{"name":"negative regulation of pentadecane metabolism","type":"related"}],"termid":"GO:1900891"}


id: PBO:0053602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 632","termid":"PBO:0053602"}


id: GO:0043857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-acetyl-L-ornithine + carbamoyl phosphate = N(2)-acetyl-L-citrulline + H+ + phosphate.","definition_xrefs":["RHEA:18609","EC:2.1.3.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"N-acetylornithine carbamoyltransferase activity","secondary_identifiers":["MetaCyc:2.1.3.9-RXN","KEGG_REACTION:R07245"],"synonyms":[{"name":"AOTC","type":"related"},{"name":"N-acetylornithine transcarbamylase activity","type":"exact"},{"name":"acetylornithine transcarbamylase activity","type":"exact"},{"name":"carbamoyl-phosphate:2-N-acetyl-L-ornithine carbamoyltransferase activity","type":"related"},{"name":"carbamoyl-phosphate:N2-acetyl-L-ornithine carbamoyltransferase activity","type":"related"}],"termid":"GO:0043857"}


id: GO:0075152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075152)","synonyms":[{"name":"negative regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075152"}


id: PBO:0034567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_during_meiotic_cell_cycle","termid":"PBO:0034567"}


id: PBO:0068687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 68, pseudogene","termid":"PBO:0068687"}


id: PBO:0004675
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.13","termid":"PBO:0004675"}


id: PBO:0047502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FER tyrosine kinase","termid":"PBO:0047502"}


id: GO:0061289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of the target cell, resulting a change in cell state that contributes to the progression of the kidney over time.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in kidney development (obsolete GO:0061289)","synonyms":[{"name":"Wnt receptor signaling pathway involved in kidney development","type":"exact"},{"name":"Wnt receptor signalling pathway involved in kidney development","type":"exact"},{"name":"Wnt-activated signaling pathway involved in kidney development","type":"exact"}],"termid":"GO:0061289"}


id: PBO:0059202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X9, pseudogene","termid":"PBO:0059202"}


id: GO:0003110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the release of norepinephrine from nerve endings modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by norepinephrine","termid":"GO:0003061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by neuronal norepinephrine","synonyms":[{"name":"increased force of heart contraction by neuronal noradrenaline","type":"related"},{"name":"increased force of heart contraction by neuronal norepinephrine","type":"exact"}],"termid":"GO:0003110"}


id: PBO:0064014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 48","termid":"PBO:0064014"}


id: PBO:0083909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent NAD(P)H:quinone oxidoreductase; induced by oxidative stress in a Yap1p dependent manner; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress; PST2 has a paralog, RFS1, that arose from the whole genome duplication","termid":"PBO:0083909"}


id: GO:0043410
data:
  {"annotated_genes":["SJAG_06592","SJAG_06621","SJAG_01978","SJAG_02945","SJAG_02135","SJAG_06622","SJAG_03903","SJAG_01587","SJAG_00318","SJAG_00845","SJAG_00781","SJAG_01199","SJAG_02486","SJAG_03828","SJAG_03453","SJAG_02183","SJAG_00027"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91396,105071,105073,107954,105074,105072,105075,108614,105069,114384,105070,113490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[84315,99842,111708,110751,86990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01978":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02486":null,"SJAG_02945":null,"SJAG_03453":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of MAPK cascade","type":"narrow"},{"name":"activation of MAPKKK cascade","type":"narrow"},{"name":"positive regulation of MAP kinase cascade","type":"exact"},{"name":"positive regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"positive regulation of MAPKKK cascade","type":"exact"},{"name":"positive regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"positive regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"positive regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"},{"name":"stimulation of MAPK cascade","type":"exact"},{"name":"stimulation of MAPKKK cascade","type":"narrow"},{"name":"up regulation of MAPKKK cascade","type":"exact"},{"name":"up-regulation of MAPK cascade","type":"exact"},{"name":"up-regulation of MAPKKK cascade","type":"exact"},{"name":"upregulation of MAPK cascade","type":"exact"},{"name":"upregulation of MAPKKK cascade","type":"exact"}],"termid":"GO:0043410","terms_by_termid":{"GO:0062038":null,"GO:1900745":null}}


id: GO:0071718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of icosanoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Icosanoids are unsaturated C20 fatty acids and skeletally related compounds.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"sodium-independent icosanoid transport","synonyms":[{"name":"sodium-independent eicosanoid transport","type":"exact"}],"termid":"GO:0071718"}


id: PBO:0085051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; expression induced in response to heat stress; FUN19 has a paralog, YOR338W, that arose from the whole genome duplication","termid":"PBO:0085051"}


id: PBO:0089995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-diacylglycerol acyltransferase Plh1/Lro1","termid":"PBO:0089995"}


id: GO:0045009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular membrane-bounded particle found in fungi and containing chitin synthase; it synthesizes chitin microfibrils. Chitin synthase activity exists in chitosomes and they are proposed to act as a reservoir for regulated transport of chitin synthase enzymes to the division septum.","definition_xrefs":["ISBN:0198506732","PMID:8970154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"chitosome","termid":"GO:0045009"}


id: GO:0046886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"positively_regulates","term_name":"hormone biosynthetic process","termid":"GO:0042446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hormone biosynthetic process","synonyms":[{"name":"activation of hormone biosynthetic process","type":"narrow"},{"name":"positive regulation of hormone anabolism","type":"exact"},{"name":"positive regulation of hormone biosynthesis","type":"exact"},{"name":"positive regulation of hormone formation","type":"exact"},{"name":"positive regulation of hormone synthesis","type":"exact"},{"name":"stimulation of hormone biosynthetic process","type":"narrow"},{"name":"up regulation of hormone biosynthetic process","type":"exact"},{"name":"up-regulation of hormone biosynthetic process","type":"exact"},{"name":"upregulation of hormone biosynthetic process","type":"exact"}],"termid":"GO:0046886"}


id: PBO:0078609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 63","termid":"PBO:0078609"}


id: GO:0097663
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Dia2 in S. cerevisiae (Pof3 in S. pombe).","definition_xrefs":["GOC:jd","PMID:14747994","PMID:15147268","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Dia2/Pof3 ubiquitin ligase complex","termid":"GO:0097663"}


id: GO:0048685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of collateral sprouting of an intact axon as a result of injury to an axon.","definition_xrefs":["GOC:jid","GOC:lm","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of collateral sprouting","termid":"GO:0048671"},{"relation_name":"is_a","term_name":"negative regulation of axon regeneration","termid":"GO:0048681"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting of intact axon in response to injury","termid":"GO:0048683"},{"relation_name":"negatively_regulates","term_name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collateral sprouting of intact axon in response to injury","synonyms":[{"name":"down regulation of collateral sprouting of intact axon in response to injury","type":"exact"},{"name":"down-regulation of collateral sprouting of intact axon in response to injury","type":"exact"},{"name":"downregulation of collateral sprouting of intact axon in response to injury","type":"exact"},{"name":"inhibition of collateral sprouting of intact axon in response to injury","type":"narrow"}],"termid":"GO:0048685"}


id: GO:0061351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neural precursor cells, resulting in the expansion of a cell population. A neural precursor cell is either a nervous system stem cell or a nervous system progenitor cell.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural precursor cell proliferation","termid":"GO:0061351"}


id: PBO:0048329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 40","termid":"PBO:0048329"}


id: PATO:0001058
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001058 absolute acceleration (obsolete PATO:0001058)","termid":"PATO:0001058"}


id: PBO:0004936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nop16 (predicted)","termid":"PBO:0004936"}


id: PBO:0027158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_alanine_level","termid":"PBO:0027158"}


id: PBO:0052305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0087 lncRNA","termid":"PBO:0052305"}


id: GO:0042632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of cholesterol within an organism or cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol homeostasis","termid":"GO:0055092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cholesterol homeostasis","secondary_identifiers":["GO:2000188","GO:2000189"],"synonyms":[{"name":"positive regulation of cholesterol homeostasis","type":"related"},{"name":"regulation of cholesterol homeostasis","type":"related"}],"termid":"GO:0042632"}


id: GO:2001199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dendritic cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte differentiation","termid":"GO:1902106"},{"relation_name":"is_a","term_name":"regulation of dendritic cell differentiation","termid":"GO:2001198"},{"relation_name":"negatively_regulates","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic cell differentiation","termid":"GO:2001199"}


id: PBO:0054714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2123","termid":"PBO:0054714"}


id: PBO:0040589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 1","termid":"PBO:0040589"}


id: PBO:0012221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 3 (predicted)","termid":"PBO:0012221"}


id: GO:0033490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, via the intermediate lathosterol.","definition_xrefs":["MetaCyc:PWY66-341","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol biosynthetic process","termid":"GO:0006695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"cholesterol biosynthetic process via lathosterol","synonyms":[{"name":"cholesterol anabolism via lathosterol","type":"exact"},{"name":"cholesterol biosynthesis via lathosterol","type":"exact"},{"name":"cholesterol formation via lathosterol","type":"exact"},{"name":"cholesterol synthesis via lathosterol","type":"exact"}],"termid":"GO:0033490"}


id: GO:0048278
data:
  {"annotated_genes":["SJAG_03347","SJAG_00171","SJAG_01697","SJAG_00380","SJAG_03552","SJAG_04966","SJAG_03499","SJAG_01772","SJAG_01633","SJAG_03536","SJAG_01598","SJAG_04978","SJAG_03848","SJAG_04023","SJAG_02320","SJAG_00280","SJAG_02587","SJAG_01324","SJAG_03005"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95646,96348,96448,97258,104813,105790,105940,108816,113665,114643],"is_not":false,"summary":null,"term":"GO:0048278"},{"annotations":[91697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048211"},{"annotations":[96389,88461,113626,114541,114317,86724,85877,114937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"}]},"cv_name":"biological_process","definition":"The initial attachment of a transport vesicle membrane to the target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane. Docking requires only that the two membranes come close enough for these proteins to interact and adhere.","definition_xrefs":["GOC:ai","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00280":null,"SJAG_00380":null,"SJAG_01324":null,"SJAG_01598":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_03005":null,"SJAG_03347":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04966":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0140056","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle docking","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vesicle to membrane docking","type":"exact"}],"termid":"GO:0048278","terms_by_termid":{"GO:0006904":null,"GO:0048211":null,"GO:0048278":null}}


id: GO:0002143
data:
  {"annotated_genes":["SJAG_01302","SJAG_03932","SJAG_00186","SJAG_03896","SJAG_03616","SJAG_04113","SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92133,101975,103005,104538,113318],"is_not":false,"summary":null,"term":"GO:0002143"},{"annotations":[113087,90404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"}]},"cv_name":"biological_process","definition":"The process in which a uridine residue at position 34 in the anticodon of a tRNA is post-transcriptionally thiolated at the C2 position. This process involves transfer of a sulfur from cysteine to position C2 by several steps.","definition_xrefs":["PMID:16871210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble uridine modification","termid":"GO:0002098"},{"relation_name":"is_a","term_name":"tRNA thio-modification","termid":"GO:0034227"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00358":null,"SJAG_01302":null,"SJAG_03616":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA wobble position uridine thiolation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA wobble uridine thiolation","type":"exact"},{"name":"wobble position s2U biosynthesis","type":"exact"}],"termid":"GO:0002143","terms_by_termid":{"GO:0002143":null,"GO:1990799":null}}


id: GO:1902179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving verruculogen.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23649274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"indole alkaloid metabolic process","termid":"GO:0035834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"verruculogen metabolic process","synonyms":[{"name":"verruculogen metabolism","type":"exact"}],"termid":"GO:1902179"}


id: PBO:0062794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orosomucoid 2","termid":"PBO:0062794"}


id: PR:O14009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear speckle splicing regulatory protein 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.06c","synonyms":[{"name":"Spom972h-SPAC29A4.06c","type":"exact"},{"name":"coiled-coil domain-containing protein 55 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14009"}


id: PBO:0031076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony_(obsolete_FYPO:0000299)","termid":"PBO:0031076"}


id: GO:0060495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the lung, from its initial state to the mature structure.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in lung development","synonyms":[{"name":"cell-cell signalling involved in lung development","type":"exact"}],"termid":"GO:0060495"}


id: GO:0106045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of methylglyoxal from a glycated guanine, to form lactate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"},{"relation_name":"is_a","term_name":"cellular detoxification of methylglyoxal","termid":"GO:0140041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0098754","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"guanine deglycation, methylglyoxal removal","termid":"GO:0106045"}


id: GO:0030530
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete heterogeneous nuclear ribonucleoprotein complex (obsolete GO:0030530)","secondary_identifiers":["Wikipedia:Heterogeneous_ribonucleoprotein_particle"],"synonyms":[{"name":"heterogeneous nuclear ribonucleoprotein","type":"exact"},{"name":"heterogeneous nuclear ribonucleoprotein complex","type":"exact"},{"name":"hnRNP","type":"exact"}],"termid":"GO:0030530"}


id: GO:0098586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to virus","termid":"GO:0009615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to virus","termid":"GO:0098586"}


id: GO:1903873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA recombinase mediator complex assembly.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:18347097","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of DNA recombinase mediator complex assembly","termid":"GO:1903872"},{"relation_name":"negatively_regulates","term_name":"DNA recombinase mediator complex assembly","termid":"GO:1903871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of DNA recombinase mediator complex assembly","synonyms":[{"name":"down regulation of DNA recombinase mediator complex assembly","type":"exact"},{"name":"down regulation of DNA recombinase mediator complex formation","type":"exact"},{"name":"down-regulation of DNA recombinase mediator complex assembly","type":"exact"},{"name":"down-regulation of DNA recombinase mediator complex formation","type":"exact"},{"name":"downregulation of DNA recombinase mediator complex assembly","type":"exact"},{"name":"downregulation of DNA recombinase mediator complex formation","type":"exact"},{"name":"inhibition of DNA recombinase mediator complex assembly","type":"narrow"},{"name":"inhibition of DNA recombinase mediator complex formation","type":"narrow"},{"name":"negative regulation of DNA recombinase mediator complex formation","type":"exact"}],"termid":"GO:1903873"}


id: PBO:0087613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; condensin reorganizes chromosomes during both mitosis and meiosis; forms a subcomplex with Smc2p that has ATP-hydrolyzing and DNA-binding activity, but other condensin subunits are required for chromatin binding; required for tRNA gene clustering at the nucleolus; potential Cdc28p substrate","termid":"PBO:0087613"}


id: PBO:0003783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-FYVE type zinc finger protein","termid":"PBO:0003783"}


id: PBO:0056676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2A pseudogene 1","termid":"PBO:0056676"}


id: PBO:0072907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory carrier membrane protein 5","termid":"PBO:0072907"}


id: GO:0097602
data:
  {"annotated_genes":["SJAG_03219","SJAG_05236","SJAG_00033","SJAG_00341"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72156,73191,73430,76231],"is_not":false,"summary":null,"term":"GO:0097602"}]},"cv_name":"molecular_function","definition":"Binding to a member of the cullin family, hydrophobic proteins that act as scaffolds for ubiquitin ligases (E3).","definition_xrefs":["GOC:ha","PMID:18698375","InterPro:IPR016158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00341":null,"SJAG_03219":null,"SJAG_05236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cullin family protein binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"cullin binding","type":"narrow"}],"termid":"GO:0097602","terms_by_termid":{"GO:0097602":null}}


id: PBO:0069058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 304, pseudogene","termid":"PBO:0069058"}


id: GO:1902087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of S,S-dimethyl-beta-propiothetin.","definition_xrefs":["PMID:19807777","GOC:jh2","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"dimethylsulfoniopropionate catabolic process","synonyms":[{"name":"S,S-dimethyl-beta-propiothetin breakdown","type":"exact"},{"name":"S,S-dimethyl-beta-propiothetin catabolic process","type":"exact"},{"name":"S,S-dimethyl-beta-propiothetin catabolism","type":"exact"},{"name":"S,S-dimethyl-beta-propiothetin degradation","type":"exact"}],"termid":"GO:1902087"}


id: SO:0002285
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This terminal inverted repeat of the CACTA family generate 3-bp target site duplication (TSD) upon insertion. CACTA elements do not have a significant preference for genic region insertions. This terminal inverted repeat (TIR) transposon superfamily is named CACTA because their terminal sequences are 'CACTA/G…C/TAGTG'.","definition_xrefs":["PMID:26709091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACTA_TIR_transposon","synonyms":[{"name":"CACTA TIR transposon","type":"exact"},{"name":"CACTA transposon element","type":"exact"},{"name":"CACTC transposon","type":"exact"},{"name":"CMC-EnSpm transposon","type":"exact"},{"name":"DTC transposon","type":"exact"},{"name":"En transposon","type":"exact"},{"name":"En-Spm transposon","type":"exact"},{"name":"EnSpm transposon","type":"exact"},{"name":"Spm transposon","type":"exact"},{"name":"dSpm transposon","type":"exact"}],"termid":"SO:0002285"}


id: PBO:0040353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 2","termid":"PBO:0040353"}


id: PBO:0048989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC1 antisense RNA 1","termid":"PBO:0048989"}


id: PBO:0077651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 3","termid":"PBO:0077651"}


id: PBO:0069179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 433, pseudogene","termid":"PBO:0069179"}


id: GO:0004141
data:
  {"annotated_genes":["SJAG_00673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75168],"is_not":false,"summary":null,"term":"GO:0004141"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-diaminononanoate + ATP + CO2 = ADP + dethiobiotin + 4 H+ + phosphate.","definition_xrefs":["EC:6.3.3.3","RHEA:15805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dethiobiotin synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R03182","MetaCyc:DETHIOBIOTIN-SYN-RXN"],"synonyms":[{"name":"7,8-diaminononanoate:carbon-dioxide cyclo-ligase (ADP-forming)","type":"related"},{"name":"DTB synthetase activity","type":"related"},{"name":"desthiobiotin synthase activity","type":"related"}],"termid":"GO:0004141","terms_by_termid":{"GO:0004141":null}}


id: GO:0022607
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id: GO:0015780
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  {"annotated_genes":["SJAG_04406","SJAG_01960","SJAG_04697","SJAG_00434","SJAG_01177","SJAG_04162","SJAG_00339"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[59045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015783"},{"annotations":[85141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[111687,84540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[108505,111688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[89233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[108506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[101096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[65747,101097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of nucleotide-sugars into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_00434":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_04162":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nucleotide-sugar transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleotide-sugar transport","type":"related"}],"termid":"GO:0015780","terms_by_termid":{"GO:0015783":null,"GO:0015786":null,"GO:0015790":null,"GO:0036085":null,"GO:0072334":null,"GO:0097624":null,"GO:0120112":null,"GO:1990569":null,"GO:1990570":null}}


id: PBO:0050087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 7","termid":"PBO:0050087"}


id: GO:0044468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the modulation of the frequency, rate or extent of blood coagulation in the bitten organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of blood coagulation in another organism","synonyms":[{"name":"envenomation resulting in modulation of blood coagulation in other organism","type":"exact"},{"name":"envenomation resulting in regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0044468"}


id: PR:O74543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A large neutral amino acids transporter small subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C777.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.04","secondary_identifiers":["UniProtKB:O74543"],"synonyms":[{"name":"Spom972h-SLC7A8","type":"exact"}],"termid":"PR:O74543"}


id: PBO:0060598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin II complex subunit D3","termid":"PBO:0060598"}


id: PBO:0067282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 363, pseudogene","termid":"PBO:0067282"}


id: PBO:0025547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein Udp7","termid":"PBO:0025547"}


id: PBO:0050669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPA5 divergent transcript","termid":"PBO:0050669"}


id: PBO:0043946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta A1","termid":"PBO:0043946"}


id: GO:0004245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage at the amino group of hydrophobic residues in insulin, casein, hemoglobin, and a number of other proteins and polypeptides.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete neprilysin activity (obsolete GO:0004245)","synonyms":[{"name":"CALLA","type":"related"},{"name":"CALLA (common acute lymphoblastic leukemia-associated) antigens","type":"related"},{"name":"CALLA antigen","type":"related"},{"name":"CALLA glycoprotein","type":"related"},{"name":"CALLA glycoproteins","type":"related"},{"name":"CD10","type":"related"},{"name":"acute lymphoblastic leukemia antigen","type":"related"},{"name":"common acute lymphoblastic leukemia antigen","type":"related"},{"name":"common acute lymphoblastic leukemia-associated antigens","type":"related"},{"name":"endopeptidase 24.11","type":"related"},{"name":"endopeptidase-2 activity","type":"broad"},{"name":"enkephalinase activity","type":"related"},{"name":"kidney-brush-border neutral endopeptidase","type":"narrow"},{"name":"kidney-brush-border neutral peptidase","type":"narrow"},{"name":"kidney-brush-border neutral proteinase activity","type":"narrow"},{"name":"membrane metalloendopeptidase activity","type":"narrow"},{"name":"neprilysin activity","type":"exact"},{"name":"neutral endopeptidase 24.11","type":"related"},{"name":"neutral endopeptidase activity","type":"related"},{"name":"neutral metallendopeptidase activity","type":"related"}],"termid":"GO:0004245"}


id: PBO:0070176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 90 pseudogene","termid":"PBO:0070176"}


id: GO:1990357
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An actin-rich cytoskeletal network located beneath the microvilli of the apical plasma membrane of polarized epithelial cells. In addition to actin filaments, the terminal web may contain actin-binding proteins, myosin motor proteins, and intermediate filaments. The terminal web can function as a contractile structure that influences the spatial distribution of microvilli as well as the development and morphogenesis of tissues containing polarized epithelial cells.","definition_xrefs":["GOC:kmv","PMID:19437512","PMID:7511618","Wikipedia:Terminal_web","PMID:24677443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938","GO:0015629"],"is_obsolete":false,"name":"terminal web","termid":"GO:1990357"}


id: PBO:0041151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 6","termid":"PBO:0041151"}


id: PBO:0077656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 8","termid":"PBO:0077656"}


id: PBO:0029823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_vegetative_cell","termid":"PBO:0029823"}


id: FYPO:0007478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a region of the genome that is normally stably assembled and maintained as heterochromatin over successive generations retains heterochromatic structure for fewer generations than normal.","definition_xrefs":["PMID:31278118","PomBase:mah","PMID:29899117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal epigenetic heterochromatin inheritance","termid":"FYPO:0007477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0007477"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0007477"],"is_obsolete":false,"name":"decreased epigenetic heterochromatin inheritance","synonyms":[{"name":"decreased PEV","type":"related"},{"name":"decreased epigenetic heterochromatin propagation","type":"exact"},{"name":"epigenetic inheritance of heterochromatin","type":"exact"},{"name":"reduced epigenetic heterochromatin inheritance","type":"exact"}],"termid":"FYPO:0007478"}


id: FYPO:0005597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome","termid":"FYPO:0004996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to centromere","synonyms":[{"name":"abnormal protein localisation to centromere","type":"exact"},{"name":"abnormal protein localisation to chromosome, centromeric region","type":"exact"},{"name":"abnormal protein localization to chromosome, centric region","type":"exact"},{"name":"abnormal protein localization to chromosome, centromeric region","type":"exact"}],"termid":"FYPO:0005597"}


id: PBO:0076177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1E member 1","termid":"PBO:0076177"}


id: PBO:0055487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2920","termid":"PBO:0055487"}


id: RO:HOM0000073
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Synology that results from allopolyploidy.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_ohnology_relationship_with","termid":"RO:HOM0000022"},{"relation_name":"is_a","term_name":"in_synology_relationship_with","termid":"RO:HOM0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homoeology_relationship_with","synonyms":[{"name":"homoeologous to","type":"exact"}],"termid":"RO:HOM0000073"}


id: PR:Q09685
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dre4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor dre4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.02","synonyms":[{"name":"DNA replication protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dre4","type":"exact"},{"name":"hyphal growth protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09685"}


id: PBO:0090374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M phase inhibitor protein kinase Mik1","termid":"PBO:0090374"}


id: GO:0019788
data:
  {"annotated_genes":["SJAG_01018"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061654"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of NEDD8 from one protein to another via the reaction X-NEDD8 + Y = Y-NEDD8 + X, where both X-NEDD8 and Y-NEDD8 are covalent linkages.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0003674","GO:0019787","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"NEDD8 transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8951661","Reactome:R-HSA-8952618","Reactome:R-HSA-8952631","Reactome:R-HSA-8951648","Reactome:R-HSA-8952638","Reactome:R-HSA-8951764","Reactome:R-HSA-8952044","Reactome:R-HSA-8956025","GO:0042295","GO:0016976","GO:0019945","Reactome:R-HSA-8952626"],"synonyms":[{"name":"Hub1 conjugating enzyme activity","type":"related"},{"name":"NEDD8 conjugating enzyme activity","type":"related"},{"name":"RUB1 conjugating enzyme activity","type":"related"}],"termid":"GO:0019788","terms_by_termid":{"GO:0061654":null}}


id: GO:0034106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["PMID:12905029","PMID:14754397","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte clearance","synonyms":[{"name":"regulation of RBC clearance","type":"exact"},{"name":"regulation of neocytolysis","type":"narrow"},{"name":"regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034106"}


id: GO:0031282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of guanylate cyclase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclase activity","termid":"GO:0031279"},{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of guanylate cyclase activity","termid":"GO:0031282"}


id: PBO:0071063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 65","termid":"PBO:0071063"}


id: GO:0036464
data:
  {"annotated_genes":["SJAG_01897","SJAG_04640","SJAG_00285","SJAG_01317","SJAG_04350","SJAG_03460","SJAG_01436","SJAG_01479","SJAG_04480","SJAG_02995","SJAG_04407","SJAG_02419","SJAG_04427","SJAG_05010","SJAG_03762","SJAG_03277","SJAG_02663","SJAG_01548","SJAG_04880","SJAG_03954","SJAG_01650","SJAG_16457","SJAG_03696","SJAG_04744","SJAG_00966","SJAG_05694","SJAG_03597","SJAG_04772","SJAG_02638","SJAG_04672","SJAG_01026","SJAG_02540","SJAG_02808","SJAG_01159","SJAG_01222","SJAG_00474","SJAG_00423","SJAG_00686","SJAG_01910","SJAG_03132","SJAG_03157","SJAG_02628","SJAG_03070","SJAG_01625","SJAG_04342","SJAG_00759","SJAG_03214","SJAG_03283","SJAG_01822","SJAG_02573","SJAG_16454","SJAG_03424","SJAG_00544","SJAG_02263","SJAG_01053","SJAG_03876","SJAG_03023","SJAG_03276","SJAG_02592","SJAG_02213","SJAG_03113","SJAG_02469","SJAG_01512","SJAG_00391","SJAG_02164","SJAG_01954","SJAG_02239","SJAG_03498","SJAG_00507"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86417,102790,108130,78373,85851,83690,93927,86469,106111,94648,86507,86341,88674,96053,101430,101783,113402,101782,86459,86056,107198,73704,92223,87680,85311,85633,71889,89131,90690,93251,106010,90500,90691,98879,103062,109754,84528,101318,109457,90920,109676,89130,101697,95058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010494"},{"annotations":[91768,96055,113286,109609,105328,106013,111449,99164,87683,97136,104658,111271,89534,111058,86462,88720,108286,109459,88064,112739,88126,106063,101698,84413,108131,91734,111778,102252,88675,91650,85853,109011,107199,107378,91961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000932"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein granule located in the cytoplasm.","definition_xrefs":["GOC:PARL","PMID:15121898","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein granule","termid":"GO:0035770"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":69,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00391":null,"SJAG_00423":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00966":null,"SJAG_01026":null,"SJAG_01053":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01436":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01625":null,"SJAG_01650":null,"SJAG_01822":null,"SJAG_01897":null,"SJAG_01910":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02469":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02663":null,"SJAG_02808":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03113":null,"SJAG_03132":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03460":null,"SJAG_03498":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_03876":null,"SJAG_03954":null,"SJAG_04342":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic ribonucleoprotein granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Staufen granule","type":"narrow"}],"termid":"GO:0036464","terms_by_termid":{"GO:0000932":null,"GO:0010494":null}}


id: PBO:0047364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 18","termid":"PBO:0047364"}


id: FYPO:0002524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NADPH-hemoprotein reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal NADPH-hemoprotein reductase activity","termid":"FYPO:0002523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased NADPH-hemoprotein reductase activity","termid":"FYPO:0002524"}


id: PBO:0060406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 20, NatB catalytic subunit","termid":"PBO:0060406"}


id: MOD:01856
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by rearrangement and condensation of a cysteine with the carbonyl of the preceding residue to form a 1,3-oxazole-4-carbothionic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues","termid":"MOD:01419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxazole/oxazoline ring crosslinked residues (Cys)","termid":"MOD:01856"}


id: GO:0009859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which water is taken up by pollen.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water transport","termid":"GO:0006833"},{"relation_name":"part_of","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pollen hydration","termid":"GO:0009859"}


id: PBO:0087807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Target membrane receptor (t-SNARE); for vesicular intermediates traveling between the Golgi apparatus and the vacuole; controls entry of biosynthetic, endocytic, and retrograde traffic into the prevacuolar compartment; syntaxin","termid":"PBO:0087807"}


