# terms

id: PBO:0038317
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"authors","termid":"PBO:0038317"}


id: GO:0021914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of smoothened signaling that is involved in the patterns of cell differentiation in the ventral spinal cord.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:tb","GOC:cls","GOC:dgh","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smoothened signaling pathway","termid":"GO:0045879"},{"relation_name":"negatively_regulates","term_name":"smoothened signaling pathway involved in ventral spinal cord patterning","termid":"GO:0021910"},{"relation_name":"part_of","term_name":"spinal cord dorsal/ventral patterning","termid":"GO:0021513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning","synonyms":[{"name":"down regulation of smoothened signaling pathway in ventral spinal cord patterning","type":"exact"},{"name":"down-regulation of smoothened signaling pathway in ventral spinal cord patterning","type":"exact"},{"name":"downregulation of smoothened signaling pathway in ventral spinal cord patterning","type":"exact"},{"name":"inhibition of smoothened signaling pathway in ventral spinal cord patterning","type":"narrow"},{"name":"negative regulation of hedgehog signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"negative regulation of hh signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"negative regulation of smoothened signalling pathway in ventral spinal cord patterning","type":"exact"}],"termid":"GO:0021914"}


id: PBO:0091209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr","termid":"PBO:0091209"}


id: PBO:0039638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 1","termid":"PBO:0039638"}


id: GO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of neuroepithelial cell differentiation. Neuroepithelial cell differentiation is the process in which epiblast cells acquire specialized features of neuroepithelial cells.","definition_xrefs":["GOC:dph","PMID:16678814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"regulation of timing of cell differentiation","termid":"GO:0048505"},{"relation_name":"negatively_regulates","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inhibition of neuroepithelial cell differentiation","synonyms":[{"name":"negative regulation of neural plate formation","type":"narrow"},{"name":"repression of premature neural plate formation","type":"narrow"}],"termid":"GO:0002085"}


id: MOD:00574
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:357","PubMed:15174056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized proline biotinylated with biotin hydrazide","synonyms":[{"name":"oxidized proline biotinylated with biotin hydrazide","type":"related"},{"name":"probiotinhydrazide","type":"related"}],"termid":"MOD:00574"}


id: GO:0098004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a virus tail fiber.","definition_xrefs":["VZ:3956","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral tail assembly","termid":"GO:0098003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus tail fiber assembly","termid":"GO:0098004"}


id: PBO:0060123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 24","termid":"PBO:0060123"}


id: GO:0060222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the process in which a cell becomes committed to a retinal cone cell fate. Retinal cone cell fate commitment is the process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"regulates","term_name":"retinal cone cell fate commitment","termid":"GO:0046551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal cone cell fate commitment","termid":"GO:0060222"}


id: GO:0052727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: antheraxanthin = capsanthin.","definition_xrefs":["EC:5.3.99.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"capsanthin synthase activity","secondary_identifiers":["MetaCyc:RXN-7947","RHEA:17373"],"synonyms":[{"name":"CCS","type":"related"},{"name":"capsanthin-capsorubin synthase activity","type":"broad"},{"name":"ketoxanthophyll synthase activity","type":"broad"}],"termid":"GO:0052727"}


id: PBO:0049663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 histone pseudogene 1","termid":"PBO:0049663"}


id: PBO:0110509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 1 like, pseudogene","termid":"PBO:0110509"}


id: PBO:0064547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 9, pseudogene","termid":"PBO:0064547"}


id: FYPO:0006085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which intramolecular conversion of uridine to pseudouridine in an snRNA molecule is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0031120","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal snRNA pseudouridylation","synonyms":[{"name":"normal snRNA pseudouridine synthesis","type":"exact"},{"name":"normal snRNA pseudouridylation during mitotic cell cycle","type":"related"},{"name":"normal snRNA pseudouridylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006085"}


id: PBO:0074682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63D","termid":"PBO:0074682"}


id: PBO:0002055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine","termid":"PBO:0002055"}


id: PBO:0079196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 25, pseudogene","termid":"PBO:0079196"}


id: GO:0097467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon of a non-glutamatergic neuron, containing the specialized apparatus necessary to release neurotransmitters at a regulatory synapse. The axon terminus is considered to be the whole region of thickening and the terminal bouton is a specialized region of it. Type III terminal boutons are larger than type II ones.","definition_xrefs":["PMID:10218156","GOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type III terminal bouton","synonyms":[{"name":"type III terminal button","type":"exact"}],"termid":"GO:0097467"}


id: PBO:0018209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal family transmembrane transporter (predicted)","termid":"PBO:0018209"}


id: GO:0007200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation of phospholipase C (PLC) and a subsequent increase in the intracellular concentration of inositol trisphosphate (IP3) and diacylglycerol (DAG).","definition_xrefs":["GOC:mah","GOC:signaling","GOC:dph","GOC:tb","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"PLC-activating GPCR signaling pathway","type":"exact"},{"name":"activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"}],"termid":"GO:0007200"}


id: SO:0000883
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon redefined to be a new amino acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded_codon","termid":"SO:0000145"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_codon_read_through","synonyms":[{"name":"stop codon read through","type":"exact"},{"name":"stop codon readthrough","type":"related"}],"termid":"SO:0000883"}


id: PBO:0074038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 23","termid":"PBO:0074038"}


id: GO:0090392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sepal giant cell. A sepal giant cell is a pavement cell that is part of the sepal epidermis and stretches one fifth the length of the sepal with a chromosome content of 16C.","definition_xrefs":["GOC:tb","PMID:20485493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal giant cell differentiation","termid":"GO:0090392"}


id: PBO:0017555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic (sporulation) septin Spn2","termid":"PBO:0017555"}


id: PBO:0005756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15 (predicted)","termid":"PBO:0005756"}


id: PBO:0062143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 13 pseudogene","termid":"PBO:0062143"}


id: PBO:0040236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 6 beta","termid":"PBO:0040236"}


id: PBO:0001043
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pop-Interacting Protein","termid":"PBO:0001043"}


id: GO:0005225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic anion by a volume-sensitive channel. A volume-sensitive channel is a channel that responds to changes in the volume of a cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"volume-sensitive anion channel activity","secondary_identifiers":["Reactome:R-HSA-8941543"],"synonyms":[{"name":"volume-regulated channel","type":"broad"}],"termid":"GO:0005225"}


id: FYPO:0007403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the anaphase-promoting complex (APC) is present for longer than normal. The APC normally forms in prometaphase and disassembles before anaphase; in mutants it may remain present during anaphase.","definition_xrefs":["PomBase:mah","PMID:24583014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of anaphase-promoting complex presence","synonyms":[{"name":"APC present during mitotic anaphase","type":"narrow"},{"name":"increased duration of APC presence","type":"exact"},{"name":"increased duration of anaphase-promoting complex presence during mitotic cell cycle","type":"related"},{"name":"increased duration of anaphase-promoting complex presence during vegetative growth","type":"exact"},{"name":"increased persistence of anaphase-promoting complex","type":"related"}],"termid":"FYPO:0007403"}


id: PBO:0067380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 482, pseudogene","termid":"PBO:0067380"}


id: PBO:0068701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 82, pseudogene","termid":"PBO:0068701"}


id: GO:0001094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor belonging to the TFIID complex, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II.","definition_xrefs":["GOC:krc","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"TFIID-class transcription factor complex binding","synonyms":[{"name":"TFIID-class transcription factor binding","type":"exact"}],"termid":"GO:0001094"}


id: PBO:0053952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1257","termid":"PBO:0053952"}


id: PR:000027556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 phosphorylated form in which the phosphorylation occurs at the Ser or Thr residue within the LLPKx[ST] motif by the mitotic checkpoint serine/threonine-protein kinase BUB1. Example: UniProtKB:P04910, Ser-122, MOD:00046.","definition_xrefs":["PMID:19965387","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2 phosphorylated form","termid":"PR:000027552"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.2 phosphorylated 2","synonyms":[{"name":"HTA2/Phos:2","type":"exact"}],"termid":"PR:000027556"}


id: MOD:00924
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and an L-threonine residue by an isopeptide bond to form N6-(L-threonyl)-L-lysine.","definition_xrefs":["PubMed:18063774","RESID:AA0440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-threonyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(2S,3R)-2-amino-3-hydroxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"N6-(L-threonyl)-L-lysine","type":"exact"},{"name":"N6-threonyl-lysine","type":"exact"}],"termid":"MOD:00924"}


id: PBO:0085714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds2p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085714"}


id: PR:000027626
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:16085489","PMID:18951025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase Clp1 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1782.09c","synonyms":[{"name":"Spom-CDC14/UnMod","type":"exact"},{"name":"Spom-clp1/UnMod","type":"exact"},{"name":"clip1p unmodified","type":"related"},{"name":"flp1p unmodified","type":"related"},{"name":"tyrosine-protein phosphatase CDC14 unmodified form (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000027626"}


id: PBO:0057687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1276","termid":"PBO:0057687"}


id: PBO:0062788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 2","termid":"PBO:0062788"}


id: PBO:0068765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 2","termid":"PBO:0068765"}


id: PBO:0018112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght1","termid":"PBO:0018112"}


id: PBO:0073204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3D","termid":"PBO:0073204"}


id: PBO:0046118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 2 pseudogene 2","termid":"PBO:0046118"}


id: GO:1904051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting to vacuole involved in autophagy.","definition_xrefs":["PMID:22020285","GOC:PARL","GO_REF:0000058","GOC:pad","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"is_a","term_name":"regulation of protein targeting","termid":"GO:1903533"},{"relation_name":"regulates","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006605","GO:0006810"],"is_obsolete":false,"name":"regulation of protein targeting to vacuole involved in autophagy","termid":"GO:1904051"}


id: GO:0006832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete small molecule transport (obsolete GO:0006832)","synonyms":[{"name":"small molecule transport","type":"exact"}],"termid":"GO:0006832"}


id: PBO:0050119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 29","termid":"PBO:0050119"}


id: PBO:0087760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of THO/TREX complexes; this complex couple transcription elongation with mitotic recombination and with mRNA metabolism and export, subunit of an RNA Pol II complex; regulates lifespan; involved in telomere maintenance; similar to Top1p","termid":"PBO:0087760"}


id: SO:0001781
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant arising in the offspring that is not found in either of the parents.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"de_novo_variant","synonyms":[{"name":"de novo variant","type":"exact"}],"termid":"SO:0001781"}


id: PBO:0077700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenomodulin","termid":"PBO:0077700"}


id: PBO:0074393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM2 intronic transcript 1","termid":"PBO:0074393"}


id: PBO:0071299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 22","termid":"PBO:0071299"}


id: GO:0038131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neuregulin, a member of the EGF family of growth factors, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:bf","PMID:16460914","GOC:signaling","PMID:20672328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neuregulin receptor activity","synonyms":[{"name":"NRG receptor activity","type":"exact"},{"name":"NRG1 receptor activity","type":"narrow"},{"name":"NRG2 receptor activity","type":"narrow"}],"termid":"GO:0038131"}


id: PBO:0057852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3163","termid":"PBO:0057852"}


id: GO:0140605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A motor activity driven by an electrochemical proton gradient (proton-motive force). PMF-driven motors are used by bacterial flagella.","definition_xrefs":["PMID:18216858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003774"}],"interesting_parent_ids":["GO:0003674","GO:0003774"],"is_obsolete":false,"name":"proton motive force-driven motor activity","termid":"GO:0140605"}


id: PR:Q10248
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.20c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C4G9.20c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.20c","synonyms":[{"name":"Spom972h-SPAC4G9.20c","type":"exact"}],"termid":"PR:Q10248"}


id: FYPO:0005189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which re-entry into the mitotic cell cycle is abnormal after arrest resulting from hydroxyurea exposure.","definition_xrefs":["PMID:19546237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to hydroxyurea","termid":"FYPO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"abnormal re-entry into mitotic cell cycle after arrest in response to hydroxyurea","synonyms":[{"name":"abnormal re-entry into mitotic cell cycle after HU arrest","type":"exact"},{"name":"abnormal re-entry into mitotic cell cycle after arrest in response to HU","type":"exact"},{"name":"abnormal re-entry into mitotic cell cycle after arrest in response to hydroxyurea during vegetative growth","type":"exact"},{"name":"abnormal re-entry into mitotic cell cycle after hydroxyurea-induced arrest","type":"exact"}],"termid":"FYPO:0005189"}


id: GO:1903565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cilium.","definition_xrefs":["GOC:krc","PMID:22072986","GOC:cilia","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cilium","termid":"GO:1903564"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cilium","synonyms":[{"name":"down regulation of protein localization to cilium","type":"exact"},{"name":"down-regulation of protein localization to cilium","type":"exact"},{"name":"downregulation of protein localization to cilium","type":"exact"},{"name":"inhibition of protein localization to cilium","type":"narrow"}],"termid":"GO:1903565"}


id: PATO:0002463
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of some aspect of the bearer extending to the position of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extends to","termid":"PATO:0002463"}


id: PBO:0110035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH1 pseudogene 1","termid":"PBO:0110035"}


id: GO:1903463
data:
  {"annotated_genes":["SJAG_03160","SJAG_03695","SJAG_02074","SJAG_03048","SJAG_02162","SJAG_01210","SJAG_04623","SJAG_04671","SJAG_01068"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112981,105020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[105021,93916,98509,85518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[99462,108168,113397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[98518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[95493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903466"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","PMID:1234","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of nuclear cell cycle DNA replication","termid":"GO:0033262"},{"relation_name":"regulates","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01068":null,"SJAG_01210":null,"SJAG_02074":null,"SJAG_02162":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_04623":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903463","terms_by_termid":{"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null}}


id: PBO:0045881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 5","termid":"PBO:0045881"}


id: GO:0070197
data:
  {"annotated_genes":["SJAG_01263","SJAG_01777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85920,102067],"is_not":false,"summary":null,"term":"GO:0070197"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle process in which physical connections are formed between telomeric heterochromatin and the nuclear envelope, facilitating bouquet formation.","definition_xrefs":["GOC:jp","GOC:vw","PMID:18818742","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic telomere tethering at nuclear periphery","termid":"GO:0044821"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01263":null,"SJAG_01777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"meiotic attachment of telomere to nuclear envelope","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of telomeres to nuclear envelope","type":"broad"},{"name":"attachment of telomeric chromatin to nuclear envelope","type":"broad"}],"termid":"GO:0070197","terms_by_termid":{"GO:0070197":null}}


id: PBO:0053957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1264","termid":"PBO:0053957"}


id: PBO:0042191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCND2 antisense RNA 1","termid":"PBO:0042191"}


id: GO:1900965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methanophenazine metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"methanophenazine metabolic process","termid":"GO:1900629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of methanophenazine metabolic process","synonyms":[{"name":"regulation of methanophenazine metabolism","type":"exact"}],"termid":"GO:1900965"}


id: PBO:0064652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA2 antisense RNA 1","termid":"PBO:0064652"}


id: PBO:0030696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutathione-disulfide_reductase_activity","termid":"PBO:0030696"}


id: GO:1900167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glial cell-derived neurotrophic factor production.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of glial cell-derived neurotrophic factor production","termid":"GO:1900166"},{"relation_name":"negatively_regulates","term_name":"glial cell-derived neurotrophic factor production","termid":"GO:0044467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell-derived neurotrophic factor production","synonyms":[{"name":"inhibition of GDNF secretion","type":"narrow"},{"name":"inhibition of glial cell line-derived neurotrophic factor secretion","type":"narrow"},{"name":"negative regulation of GDNF secretion","type":"exact"},{"name":"negative regulation of glial cell line-derived neurotrophic factor secretion","type":"related"},{"name":"negative regulation of glial cell-derived neurotrophic factor secretion","type":"narrow"}],"termid":"GO:1900167"}


id: PBO:0012591
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature initiation of mitosis","termid":"PBO:0012591"}


id: GO:0102154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,4',6-tetrahydroxydibenzoylmethane + UDP-alpha-D-glucose = 8C-glucosyl-2-hydroxynaringenin + UDP + 2 H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"8C-naringenin dibenzoylmethane tautomer glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11685"],"termid":"GO:0102154"}


id: PBO:0073122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory blood group 1, pseudogene","termid":"PBO:0073122"}


id: PBO:0027505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydrazinocurcumin","termid":"PBO:0027505"}


id: GO:1905108
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111811],"is_not":false,"summary":null,"term":"GO:1905108"}]},"cv_name":"molecular_function","definition":"Binding to guanosine.","definition_xrefs":["GOC:TermGenie","GO_REF:0000067","PMID:26007660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside binding","termid":"GO:0032550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"guanosine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905108","terms_by_termid":{"GO:1905108":null}}


id: PBO:0060982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGFR antisense RNA 1","termid":"PBO:0060982"}


id: GO:0010301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + xanthoxin = (+)-abscisic aldehyde + H+ + NADH.","definition_xrefs":["RHEA:12548","EC:1.1.1.288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"xanthoxin dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:1.1.1.288-RXN","GO:0033710","KEGG_REACTION:R06954"],"synonyms":[{"name":"ABA2","type":"related"},{"name":"xanthoxin dehydrogenase activity","type":"broad"},{"name":"xanthoxin oxidase activity","type":"related"},{"name":"xanthoxin:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0010301"}


id: PBO:0072820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 13","termid":"PBO:0072820"}


id: PBO:0069132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 382, pseudogene","termid":"PBO:0069132"}


id: GO:0051671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism initiates the activity of the inactive enzyme autolysin in another organism. The autolysin enzyme belongs to, and is active in, the other organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of autolysin activity in other organism (obsolete GO:0051671)","synonyms":[{"name":"activation of autolysin activity in another organism","type":"exact"},{"name":"activation of autolysis in other organism","type":"narrow"},{"name":"activation of autolytic activity in other organism","type":"narrow"},{"name":"induction of autolysin activity in another organism","type":"exact"},{"name":"induction of autolysis in other organism","type":"narrow"},{"name":"induction of autolytic activity in other organism","type":"narrow"},{"name":"positive regulation of autolysin activity in another organism","type":"broad"}],"termid":"GO:0051671"}


id: PBO:0067615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 787, pseudogene","termid":"PBO:0067615"}


id: GO:0003006
data:
  {"annotated_genes":["SJAG_00974","SJAG_01321","SJAG_03090","SJAG_00971","SJAG_01419","SJAG_00993","SJAG_04080","SJAG_02079","SJAG_00405","SJAG_00821","SJAG_01601","SJAG_05239","SJAG_04901","SJAG_05153","SJAG_03997","SJAG_04483","SJAG_03536","SJAG_02556","SJAG_02828","SJAG_02320","SJAG_02712","SJAG_03501","SJAG_00826","SJAG_01017","SJAG_04859","SJAG_04853","SJAG_03097","SJAG_04615","SJAG_04781","SJAG_02241","SJAG_00486","SJAG_01113","SJAG_04271","SJAG_03688","SJAG_03557","SJAG_00663","SJAG_05309","SJAG_03915","SJAG_01531","SJAG_06638","SJAG_04238","SJAG_03483","SJAG_03057","SJAG_01076","SJAG_00399","SJAG_02460","SJAG_04275","SJAG_02718","SJAG_03587","SJAG_04236","SJAG_02724","SJAG_01662","SJAG_03221","SJAG_03746","SJAG_04140","SJAG_01769","SJAG_01677","SJAG_01465","SJAG_00073","SJAG_03250","SJAG_00247","SJAG_00114","SJAG_04184","SJAG_02248","SJAG_02401","SJAG_01410","SJAG_02529","SJAG_04922","SJAG_01495","SJAG_02169","SJAG_04470","SJAG_04868","SJAG_02736","SJAG_03013","SJAG_02226","SJAG_04010","SJAG_01483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107441],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072316"},{"annotations":[91510,93012,93080,106244,114639,96859,92663,101237,107637,108840,100264,103848,110068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[107442],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[90602],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[113892,86399,84875,84383,87902],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105431],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[113902,110213,100307,105204,113893],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[93730,101088,87635,105432,106245],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031321"},{"annotations":[97844,95962,114932,110069,91511,106246,101404,94961,96032,93690,114640,93731,103512,95963,113056,115114,87426],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[95964,93691,110070,88423,93013,100265,103849,95965,99055,102955],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[84103],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[107443,90158],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072000"},{"annotations":[85322,104640,93572,106951,95256,92317,96710,106429,84104,102185,85446,102756,111147,112933,114862],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[103176,115180,115181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007531"},{"annotations":[95258,92794,92318,95194,114863,106430,106952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007533"},{"annotations":[104641,99364,99090,90217],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[107326],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[98427],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[86873],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[114332],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075319"},{"annotations":[88319],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[89481],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"},{"annotations":[90643,96250,102130,95967,112100,95966],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"A developmental process in which a progressive change in the state of some part of an organism, germline or somatic, specifically contributes to its ability to form offspring.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"developmental 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process involved in reproduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"puberty","type":"narrow"},{"name":"reproductive developmental process","type":"related"}],"termid":"GO:0003006","terms_by_termid":{"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071171":null,"GO:0071515":null,"GO:0071998":null,"GO:0072000":null,"GO:0072316":null,"GO:0075296":null,"GO:0075297":null,"GO:0075319":null,"GO:1903024":null}}


id: GO:0004394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + heparan sulfate = adenosine 3',5'-bisphosphate + heparan sulfate 2-O-sulfate; results in 2-O-sulfation of iduronic acid residues in heparan sulfate.","definition_xrefs":["PMID:9153262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"heparan sulfate 2-O-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2076508"],"synonyms":[{"name":"heparan-sulfate 2-O-sulphotransferase activity","type":"exact"},{"name":"heparin 2-sulfotransferase activity","type":"related"},{"name":"heparin-sulphate 2-sulphotransferase activity","type":"related"}],"termid":"GO:0004394"}


id: PR:O94621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp109 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein usp109 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.12","synonyms":[{"name":"Spom972h-usp109","type":"exact"}],"termid":"PR:O94621"}


id: PBO:0029804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_with_abnormal_cell_shape_(obsolete_FYPO:0002433)","termid":"PBO:0029804"}


id: PBO:0070886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 18","termid":"PBO:0070886"}


id: PBO:0041822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine synthase 1","termid":"PBO:0041822"}


id: GO:0017055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of RNA polymerase II transcriptional preinitiation complex assembly.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of RNA polymerase II transcription preinitiation complex assembly","termid":"GO:0045898"},{"relation_name":"is_a","term_name":"negative regulation of transcription initiation by RNA polymerase II","termid":"GO:0060633"},{"relation_name":"negatively_regulates","term_name":"RNA polymerase II preinitiation complex assembly","termid":"GO:0051123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0006351","GO:0065003","GO:0010467","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA polymerase II transcription preinitiation complex assembly","synonyms":[{"name":"down regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"down-regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"downregulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"inhibition of RNA polymerase II transcriptional preinitiation complex assembly","type":"narrow"},{"name":"negative regulation of RNA polymerase II transcriptional pre-initiation complex assembly","type":"exact"},{"name":"negative regulation of RNA polymerase II transcriptional pre-initiation complex biosynthesis","type":"exact"},{"name":"negative regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"negative regulation of RNA polymerase II transcriptional preinitiation complex formation","type":"exact"}],"termid":"GO:0017055"}


id: PBO:0047588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor like 1","termid":"PBO:0047588"}


id: GO:1901786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of p-cresol.","definition_xrefs":["GOC:TermGenie","PMID:10623531","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"p-cresol metabolic process","termid":"GO:1901784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-cresol biosynthetic process","synonyms":[{"name":"p-cresol anabolism","type":"exact"},{"name":"p-cresol biosynthesis","type":"exact"},{"name":"p-cresol formation","type":"exact"},{"name":"p-cresol synthesis","type":"exact"}],"termid":"GO:1901786"}


id: PBO:0088783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Atf31","termid":"PBO:0088783"}


id: GO:0061769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-ribosylnicotinate + ATP = ADP + 2 H+ + nicotinate mononucleotide.","definition_xrefs":["GOC:dph","PMID:17914902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"ribosylnicotinate kinase activity","secondary_identifiers":["Reactome:R-HSA-8869607","Reactome:R-HSA-8869606"],"termid":"GO:0061769"}


id: PBO:0043398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemerin chemokine-like receptor 1","termid":"PBO:0043398"}


id: GO:0010084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the polarity of an animal organ axis is specified.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ axis polarity","termid":"GO:0010084"}


id: GO:0106150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of zearalenone, a mycotoxin produced by several Fusarium species, is most commonly found as a contaminant in stored grain and has chronic estrogenic effects on mammals.","definition_xrefs":["PMID:16517624","PMID:20578001","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"zearalenone biosynthetic process","termid":"GO:0106150"}


id: GO:0106330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-9-O-acetylneuraminate = acetate + H+ + N-acetylneuraminate.","definition_xrefs":["PMID:22291594","RHEA:22600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialate O-acetylesterase activity","termid":"GO:0001681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"sialate 9-O-acetylesterase activity","termid":"GO:0106330"}


id: PBO:0053404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 334","termid":"PBO:0053404"}


id: GO:0110069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The separation of a syncytial embryo into individual cells.","definition_xrefs":["GOC:ha","PMID:27226317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularization","termid":"GO:0007349"},{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"syncytial embryo cellularization","termid":"GO:0110069"}


id: GO:0009093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cysteine, 2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"cysteine catabolic process","secondary_identifiers":["Wikipedia:Cysteine"],"synonyms":[{"name":"cysteine breakdown","type":"exact"},{"name":"cysteine catabolism","type":"exact"},{"name":"cysteine degradation","type":"exact"}],"termid":"GO:0009093"}


id: PBO:0080795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-prolyl aminopeptidase 2","termid":"PBO:0080795"}


id: PBO:0084627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methylesterase performing penultimate step of diphthamide biosynthesis; hydrolyzes methylated diphthine to produce diphthine and allows Dph6-catalyzed amidation reaction to occur; deletion leads to resistance to sordarin and accumulation of methylatediphthine; WD40 domain-containing protein; involved in endosomal recycling; forms complex with Rtt10p that functions in retromer-mediated pathway for recycling internalized cell-surface proteins","termid":"PBO:0084627"}


id: PBO:0086176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the normal accumulation of 25S and 5.8S rRNAs; nucleolar protein; associated with the 27SA2 pre-ribosomal particle; proposed to be involved in the biogenesis of the 60S ribosomal subunit","termid":"PBO:0086176"}


id: GO:0030165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a PDZ domain of a protein, a domain found in diverse signaling proteins.","definition_xrefs":["Pfam:PF00595","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"PDZ domain binding","synonyms":[{"name":"GLGF-domain binding","type":"exact"},{"name":"DHR-domain binding","type":"exact"}],"termid":"GO:0030165"}


id: PBO:0067249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 322, pseudogene","termid":"PBO:0067249"}


id: SO:1001247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS whose predicted amino acid sequence is unsupported by any experimental evidence or by any match with any other known sequence.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"orphan","termid":"SO:0000910"},{"relation_name":"is_a","term_name":"CDS_predicted","termid":"SO:1001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orphan_CDS","synonyms":[{"name":"orphan CDS","type":"exact"}],"termid":"SO:1001247"}


id: PBO:0058405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4775","termid":"PBO:0058405"}


id: GO:0009153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide biosynthetic process","termid":"GO:0009265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleotide biosynthetic process","synonyms":[{"name":"purine deoxyribonucleotide anabolism","type":"exact"},{"name":"purine deoxyribonucleotide biosynthesis","type":"exact"},{"name":"purine deoxyribonucleotide formation","type":"exact"},{"name":"purine deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009153"}


id: GO:0047960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + H2O + NAD+ = glyoxylate + NH3 + NADH.","definition_xrefs":["EC:1.4.1.10","MetaCyc:GLYCINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glycine dehydrogenase activity","secondary_identifiers":["RHEA:15721"],"synonyms":[{"name":"glycine:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0047960"}


id: GO:0032745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-21 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-21 production","termid":"GO:0032665"},{"relation_name":"positively_regulates","term_name":"interleukin-21 production","termid":"GO:0032625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-21 production","secondary_identifiers":["GO:0045392"],"synonyms":[{"name":"activation of interleukin-21 production","type":"narrow"},{"name":"positive regulation of IL-21 production","type":"exact"},{"name":"positive regulation of interleukin-21 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-21 production","type":"narrow"},{"name":"up regulation of interleukin-21 production","type":"exact"},{"name":"up-regulation of interleukin-21 production","type":"exact"},{"name":"upregulation of interleukin-21 production","type":"exact"}],"termid":"GO:0032745"}


id: PBO:0012855
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in sister chromatid disjoining","termid":"PBO:0012855"}


id: GO:0086097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating G protein-coupled receptor signaling pathway initiated by angiotensin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating angiotensin-activated signaling pathway","synonyms":[{"name":"Gq-coupled angiotensin receptor signaling pathway","type":"exact"},{"name":"PLC-activating angiotensin receptor signaling pathway","type":"exact"},{"name":"angiotensin-mediated signaling pathway via activation of phospholipase C","type":"exact"},{"name":"phospholipase C-activating angiotensin receptor signaling pathway","type":"exact"},{"name":"phospholipase C-activating angiotensin-mediated signaling pathway","type":"related"}],"termid":"GO:0086097"}


id: GO:0030877
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic protein complex containing glycogen synthase kinase-3-beta (GSK-3-beta), the adenomatous polyposis coli protein (APC), and the scaffolding protein axin, among others; phosphorylates beta-catenin, targets it for degradation by the proteasome.","definition_xrefs":["PMID:14600025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"beta-catenin destruction complex","secondary_identifiers":["GO:0034742","GO:0034747"],"synonyms":[{"name":"23S APC complex","type":"narrow"},{"name":"APC-Axin-1-beta-catenin complex","type":"exact"},{"name":"Axin-APC-beta-catenin-GSK3B complex","type":"exact"},{"name":"BDC","type":"exact"},{"name":"beta-catenin degradation complex","type":"exact"}],"termid":"GO:0030877"}


id: PBO:0046406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPC1 antisense RNA 2","termid":"PBO:0046406"}


id: GO:0007403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a glial cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"glial cell fate commitment","termid":"GO:0021781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell fate determination","secondary_identifiers":["GO:0043361"],"termid":"GO:0007403"}


id: GO:0002603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002582"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002601"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"}],"termid":"GO:0002603"}


id: GO:0000722
data:
  {"annotated_genes":["SJAG_06597","SJAG_06642","SJAG_05105","SJAG_02079","SJAG_05173","SJAG_01677","SJAG_00640","SJAG_05353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85330,88852,88853,88854,88855,92323,107863,109076,109077,109078,109079,109080],"is_not":false,"summary":null,"term":"GO:0000722"}]},"cv_name":"biological_process","definition":"Any recombinational process that contributes to the maintenance of proper telomeric length.","definition_xrefs":["PMID:11850777","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"},{"relation_name":"is_a","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"telomere maintenance via recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"telomerase-independent telomere maintenance","type":"related"}],"termid":"GO:0000722","terms_by_termid":{"GO:0000722":null}}


id: PBO:0041066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRI3 binding protein","termid":"PBO:0041066"}


id: FYPO:0001563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular glutamate level","secondary_identifiers":["FYPO:0001615"],"synonyms":[{"name":"decreased cellular L-glutamate level","type":"exact"},{"name":"decreased cellular glutamate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular glutamate level during vegetative growth","type":"exact"},{"name":"decreased cellular glutamic acid level","type":"related"},{"name":"decreased glutamate accumulation","type":"related"},{"name":"reduced cellular glutamate level","type":"exact"}],"termid":"FYPO:0001563"}


id: PATO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being unseparated into parts or divisions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undivided","synonyms":[{"name":"unseparated","type":"related"}],"termid":"PATO:0002034"}


id: GO:2000119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sodium-dependent phosphate transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of sodium-dependent phosphate transport","termid":"GO:2000118"},{"relation_name":"negatively_regulates","term_name":"sodium-dependent phosphate transport","termid":"GO:0044341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of sodium-dependent phosphate transport","termid":"GO:2000119"}


id: PBO:0088703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP4 subunit Gfh1","termid":"PBO:0088703"}


id: PBO:0040209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL transcriptional regulator 2","termid":"PBO:0040209"}


id: GO:0042371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals.","definition_xrefs":["GOC:jl","PMID:24489112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"},{"relation_name":"is_a","term_name":"vitamin K metabolic process","termid":"GO:0042373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"vitamin K biosynthetic process","synonyms":[{"name":"naphthoquinone metabolic process","type":"broad"},{"name":"naphthoquinone metabolism","type":"broad"},{"name":"vitamin K anabolism","type":"exact"},{"name":"vitamin K biosynthesis","type":"exact"},{"name":"vitamin K formation","type":"exact"},{"name":"vitamin K synthesis","type":"exact"}],"termid":"GO:0042371"}


id: PBO:0040132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASB16 antisense RNA 1","termid":"PBO:0040132"}


id: PR:O94447
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slm1 gene.","definition_xrefs":["UniProtKB:O94447","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal signaling protein slm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.13c","synonyms":[{"name":"Spom972h-slm1","type":"exact"}],"termid":"PR:O94447"}


id: GO:0072666
data:
  {"annotated_genes":["SJAG_00380","SJAG_16459","SJAG_01229","SJAG_00208","SJAG_00204","SJAG_03892","SJAG_00821","SJAG_00416","SJAG_03756","SJAG_02117","SJAG_02912","SJAG_01242","SJAG_04489","SJAG_01981","SJAG_04912","SJAG_00108","SJAG_03385","SJAG_01586","SJAG_05210","SJAG_01281","SJAG_00181","SJAG_03783","SJAG_03976","SJAG_04349","SJAG_02584","SJAG_05303","SJAG_04936","SJAG_01088","SJAG_01360","SJAG_03250","SJAG_04552","SJAG_04024","SJAG_03970","SJAG_01488"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101872,87636,110577,84259,87769,84295,109443,84182,87203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[102863,85073,93545,86332,88251,98269,100202,100182,97256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[105505,84130,110837,88418,87772,107593,88134,105923,112524,86702,97026,94104,101090,84298,102686,106771,92108,87639,103498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a vacuole.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"},{"relation_name":"is_a","term_name":"protein localization to vacuole","termid":"GO:0072665"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00821":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01360":null,"SJAG_01488":null,"SJAG_01586":null,"SJAG_01981":null,"SJAG_02117":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03385":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05210":null,"SJAG_05303":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to vacuole","type":"exact"}],"termid":"GO:0072666","terms_by_termid":{"GO:0006623":null,"GO:0043328":null,"GO:0120113":null}}


id: PBO:0000615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, URM1 activating enzyme (predicted)","termid":"PBO:0000615"}


id: GO:0001823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. In mammals, the mesonephros is the second of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the mesonephros will form the mature kidney.","definition_xrefs":["ISBN:0721662544","PMID:10535314","GOC:dph","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephros development","synonyms":[{"name":"Wolffian body development","type":"exact"}],"termid":"GO:0001823"}


id: GO:0030857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epithelial cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"negatively_regulates","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell differentiation","synonyms":[{"name":"down regulation of epithelial cell differentiation","type":"exact"},{"name":"down-regulation of epithelial cell differentiation","type":"exact"},{"name":"downregulation of epithelial cell differentiation","type":"exact"},{"name":"inhibition of epithelial cell differentiation","type":"narrow"}],"termid":"GO:0030857"}


id: GO:0031344
data:
  {"annotated_genes":["SJAG_02379","SJAG_00514","SJAG_04509","SJAG_03453","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84067,86024,86989,89610,107492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection organisation","type":"exact"},{"name":"regulation of cell projection organization and biogenesis","type":"related"}],"termid":"GO:0031344","terms_by_termid":{"GO:1902917":null}}


id: PBO:0113217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Modulator of cellular lipid distribution; localizes to ER-PM and ER-mitochondria contact sites; shares homology with lipid transfer proteins Vps13p and Atg2p; homolog of D. melanogaster Hobbit protein","termid":"PBO:0113217"}


id: GO:0060469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of transcription as a part of the process of egg activation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in egg activation (obsolete GO:0060469)","synonyms":[{"name":"activation of the egg genome","type":"related"},{"name":"activation of the maternal genome","type":"related"}],"termid":"GO:0060469"}


id: PBO:0012219
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium","termid":"PBO:0012219"}


id: PBO:0062004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 4 pseudogene","termid":"PBO:0062004"}


id: PATO:0000587
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased size","synonyms":[{"name":"hypoplasia","type":"narrow"},{"name":"reduced","type":"related"},{"name":"small","type":"related"},{"name":"tiny","type":"related"},{"name":"underdeveloped","type":"narrow"}],"termid":"PATO:0000587"}


id: GO:0006700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C21-steroid hormone metabolic process","termid":"GO:0008207"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"C21-steroid hormone biosynthetic process","synonyms":[{"name":"C21-steroid hormone anabolism","type":"exact"},{"name":"C21-steroid hormone biosynthesis","type":"exact"},{"name":"C21-steroid hormone formation","type":"exact"},{"name":"C21-steroid hormone synthesis","type":"exact"}],"termid":"GO:0006700"}


id: GO:0020028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hemoglobin into a cell by receptor-mediated endocytosis.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"endocytic hemoglobin import into cell","synonyms":[{"name":"endocytic hemoglobin import","type":"related"},{"name":"haemoglobin uptake","type":"exact"},{"name":"hemoglobin uptake","type":"exact"}],"termid":"GO:0020028"}


id: GO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within the mucosal tissue of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","PMID:15609020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosal lymphocyte homeostasis","termid":"GO:0002261"}


id: GO:0020037
data:
  {"annotated_genes":["SJAG_MIT04","SJAG_03929","SJAG_03249","SJAG_02794","SJAG_02646","SJAG_02398","SJAG_02744","SJAG_05027","SJAG_04217","SJAG_03750","SJAG_02982","SJAG_04823"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83945,84647,87629,88362,90776,103974,104088,109336,111362,112243,112849,114394,115129],"is_not":false,"summary":null,"term":"GO:0020037"}]},"cv_name":"molecular_function","definition":"Binding to a heme, a compound composed of iron complexed in a porphyrin (tetrapyrrole) ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole binding","termid":"GO:0046906"}],"gene_count":12,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_02794":null,"SJAG_02982":null,"SJAG_03249":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04217":null,"SJAG_04823":null,"SJAG_05027":null,"SJAG_MIT04":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heme binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"haem binding","type":"exact"}],"termid":"GO:0020037","terms_by_termid":{"GO:0020037":null}}


id: PBO:0067678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 863, pseudogene","termid":"PBO:0067678"}


id: GO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct. An example of this is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"ovulation","termid":"GO:0030728"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation from ovarian follicle","termid":"GO:0001542"}


id: MOD:00190
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to dehydrobutyrine.","definition_xrefs":["PubMed:1547888","OMSSA:97","PubMed:3769923","OMSSA:164","Unimod:23#T","DeltaMass:0","OMSSA:141","RESID:AA0182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation of an hydroxyl amino acid with prompt loss of phosphate","termid":"MOD:00416"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"dehydrobutyrine","termid":"MOD:01703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrobutyrine (Thr)","synonyms":[{"name":"(2Z)-2-aminobut-2-enoic acid","type":"exact"},{"name":"(Z)-2-amino-2-butenoic acid","type":"exact"},{"name":"(Z)-2-aminobutenoic acid","type":"exact"},{"name":"(Z)-dehydrobutyrine","type":"exact"},{"name":"2,3-didehydrobutyrine","type":"exact"},{"name":"3-methyldehydroalanine","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"Dhb","type":"exact"},{"name":"Dhb(Thr)","type":"exact"},{"name":"MOD_RES (Z)-2,3-didehydrobutyrine","type":"exact"},{"name":"alpha,beta-dehydroaminobutyric acid","type":"exact"},{"name":"anhydrothreonine","type":"exact"},{"name":"beta-elim-t","type":"exact"},{"name":"dehydro","type":"exact"},{"name":"methyl-dehydroalanine","type":"exact"},{"name":"phospholosst","type":"exact"}],"termid":"MOD:00190"}


id: PBO:0040144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-silencing function 1A histone chaperone","termid":"PBO:0040144"}


id: GO:0008615
data:
  {"annotated_genes":["SJAG_01881","SJAG_00283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83898,91638],"is_not":false,"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine metabolic process","termid":"GO:0008614"},{"relation_name":"is_a","term_name":"vitamin B6 biosynthetic process","termid":"GO:0042819"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"pyridoxine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxine anabolism","type":"exact"},{"name":"pyridoxine biosynthesis","type":"exact"},{"name":"pyridoxine formation","type":"exact"},{"name":"pyridoxine synthesis","type":"exact"}],"termid":"GO:0008615","terms_by_termid":{"GO:0008615":null}}


id: PBO:0090599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone Spt2","termid":"PBO:0090599"}


id: PBO:0044953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyhypusine synthase","termid":"PBO:0044953"}


id: PBO:0049435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 12","termid":"PBO:0049435"}


id: FYPO:0001171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular pH","synonyms":[{"name":"decreased cellular pH during mitotic cell cycle","type":"related"},{"name":"decreased cellular pH during vegetative growth","type":"exact"},{"name":"decreased cellular pH level","type":"exact"},{"name":"reduced cellular pH","type":"exact"}],"termid":"FYPO:0001171"}


id: PBO:0031245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_division","termid":"PBO:0031245"}


id: GO:0021513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"},{"relation_name":"part_of","term_name":"spinal cord patterning","termid":"GO:0021511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord dorsal/ventral patterning","synonyms":[{"name":"spinal cord dorsal-ventral patterning","type":"exact"},{"name":"spinal cord dorsoventral patterning","type":"exact"}],"termid":"GO:0021513"}


id: PBO:0043898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 2","termid":"PBO:0043898"}


id: PBO:0064644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPDPF pseudogene 1","termid":"PBO:0064644"}


id: GO:2000017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of determination of dorsal identity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of determination of dorsal identity","termid":"GO:2000015"},{"relation_name":"positively_regulates","term_name":"determination of dorsal identity","termid":"GO:0048263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of determination of dorsal identity","synonyms":[{"name":"positive regulation of determination of adaxial identity","type":"related"}],"termid":"GO:2000017"}


id: PBO:0051733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 4 pseudogene 2","termid":"PBO:0051733"}


id: PBO:0065909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB GTPase activating protein 1","termid":"PBO:0065909"}


id: GO:1901036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-glutamine import into cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of L-glutamine import across plasma membrane","termid":"GO:1901034"},{"relation_name":"is_a","term_name":"positive regulation of glutamine transport","termid":"GO:2000487"},{"relation_name":"positively_regulates","term_name":"L-glutamine import across plasma membrane","termid":"GO:1903803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of L-glutamine import across plasma membrane","synonyms":[{"name":"activation of L-glutamine import","type":"narrow"},{"name":"activation of L-glutamine uptake","type":"exact"},{"name":"positive regulation of L-glutamine import","type":"broad"},{"name":"positive regulation of L-glutamine uptake","type":"exact"},{"name":"up regulation of L-glutamine import","type":"exact"},{"name":"up regulation of L-glutamine uptake","type":"exact"},{"name":"up-regulation of L-glutamine import","type":"exact"},{"name":"up-regulation of L-glutamine uptake","type":"exact"},{"name":"upregulation of L-glutamine import","type":"exact"},{"name":"upregulation of L-glutamine uptake","type":"exact"}],"termid":"GO:1901036"}


id: FYPO:0004854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"},{"relation_name":"is_a","term_name":"increased protein localization to cell division site","termid":"FYPO:0004655"},{"relation_name":"is_a","term_name":"increased protein localization to cell cortex during vegetative growth","termid":"FYPO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"increased protein localization to actomyosin contractile ring","synonyms":[{"name":"increased protein localisation to actomyosin contractile ring","type":"exact"},{"name":"increased protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"increased protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"increased protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"increased protein localization to cytokinetic contractile ring","type":"exact"},{"name":"increased protein localization to mitotic contractile ring","type":"exact"},{"name":"increased protein recruitment to actomyosin contractile ring","type":"related"}],"termid":"FYPO:0004854"}


id: GO:0070690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) into glycine and acetaldehyde, with acetaldehyde being subsequently converted to acetyl-CoA.","definition_xrefs":["GOC:bf","GOC:mah","MetaCyc:PWY-5436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"threonine catabolic process","termid":"GO:0006567"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0055086","GO:0044281","GO:0006520","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"L-threonine catabolic process to acetyl-CoA","synonyms":[{"name":"L-threonine breakdown to acetyl-CoA","type":"exact"},{"name":"L-threonine catabolism to acetyl-CoA","type":"exact"},{"name":"L-threonine degradation to acetyl-CoA","type":"exact"},{"name":"threonine catabolic process to acetyl-CoA","type":"broad"}],"termid":"GO:0070690"}


id: PBO:0056731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEST intronic transcript 1, antisense RNA","termid":"PBO:0056731"}


id: GO:0046529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the parts of the wing imaginal discs, giving rise to the adult thorax.","direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc fusion","termid":"GO:0046528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc fusion, thorax closure","termid":"GO:0046529"}


id: PBO:0077861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 2","termid":"PBO:0077861"}


id: PBO:0016125
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is located in the silent mating type region, it is only transcribed when at the mat1 locus, see mat1-Mc","termid":"PBO:0016125"}


id: PR:O13615
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pleiotropic regulator 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02867","PRO:DNx","PANTHER:PTHR19923:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor prp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.07","secondary_identifiers":["UniProtKB:O13615"],"synonyms":[{"name":"Spom972h-PLRG1","type":"exact"},{"name":"complexed with cdc5 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-mRNA-processing protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13615"}


id: GO:0016041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamate + 2 oxidized ferredoxin = L-glutamine + 2-oxoglutarate + 2 reduced ferredoxin + 2 H+. This is a two-step reaction: (a) L-glutamate + NH3 = L-glutamine + H2O, (b) L-glutamate + 2 oxidized ferredoxin + H2O = NH3 + 2-oxoglutarate + 2 reduced ferredoxin + 2 H+.","definition_xrefs":["EC:1.4.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase activity","termid":"GO:0015930"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor","termid":"GO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutamate synthase (ferredoxin) activity","secondary_identifiers":["MetaCyc:GLUTAMATE-SYNTHASE-FERREDOXIN-RXN","RHEA:12128","MetaCyc:PWY-4341"],"synonyms":[{"name":"L-glutamate:ferredoxin oxidoreductase (transaminating)","type":"related"},{"name":"ferredoxin-dependent glutamate synthase activity","type":"related"},{"name":"ferredoxin-glutamate synthase activity","type":"related"},{"name":"glutamate synthase (ferredoxin-dependent)","type":"related"}],"termid":"GO:0016041"}


id: PATO:0000431
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000431 odor value (obsolete PATO:0000431)","termid":"PATO:0000431"}


id: PBO:0087138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein that associates with polysomes; may be involved in regulating mRNA translation; involved in the copper-dependent mineralization of copper sulfide complexes on cell surface in cells cultured in copper salts; SLF1 has a paralog, SRO9, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087138"}


id: GO:0004992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with platelet activating factor to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"platelet activating factor receptor activity","synonyms":[{"name":"PAF receptor activity","type":"exact"}],"termid":"GO:0004992"}


id: PBO:0050321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 23","termid":"PBO:0050321"}


id: PBO:0077580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMLHE antisense RNA 1","termid":"PBO:0077580"}


id: GO:1905630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glyceraldehyde stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:11377826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glyceraldehyde","termid":"GO:1905630"}


id: GO:0016887
data:
  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id: GO:0031522
data:
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id: PBO:0007714
data:
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id: PR:O94452
data:
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id: PBO:0017978
data:
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id: PBO:0074072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 47","termid":"PBO:0074072"}


id: PBO:0049997
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id: GO:0048313
data:
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id: PBO:0075025
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id: FYPO:0001634
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id: PBO:0028907
data:
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id: PBO:0071833
data:
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id: PBO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial heat shock protein Hsp60/Mcp60","termid":"PBO:0000300"}


id: PBO:0056706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotransferrin","termid":"PBO:0056706"}


id: GO:0010574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of vascular endothelial growth factor.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"vascular endothelial growth factor production","termid":"GO:0010573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of vascular endothelial growth factor production","termid":"GO:0010574"}


id: GO:1990109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition and rejection of pollen of one species by cells in the stigma of another species.","definition_xrefs":["PMID:21205670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recognition of pollen","termid":"GO:0048544"},{"relation_name":"part_of","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rejection of pollen from other species","synonyms":[{"name":"unilateral interspecific incompatibility","type":"exact"}],"termid":"GO:1990109"}


id: GO:0050855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050854"},{"relation_name":"regulates","term_name":"B cell receptor signaling pathway","termid":"GO:0050853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of B cell receptor signaling pathway","synonyms":[{"name":"regulation of B cell receptor signalling pathway","type":"exact"},{"name":"regulation of B lymphocyte receptor signaling pathway","type":"exact"},{"name":"regulation of B lymphocyte receptor signalling pathway","type":"exact"},{"name":"regulation of B-cell receptor signaling pathway","type":"exact"},{"name":"regulation of B-cell receptor signalling pathway","type":"exact"},{"name":"regulation of B-lymphocyte receptor signaling pathway","type":"exact"},{"name":"regulation of B-lymphocyte receptor signalling pathway","type":"exact"}],"termid":"GO:0050855"}


id: PBO:0034404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_development_of","termid":"PBO:0034404"}


id: GO:0004940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta1-adrenergic receptors.","definition_xrefs":["IUPHAR_GPCR:1274","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-adrenergic receptor activity","termid":"GO:0004939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"beta1-adrenergic receptor activity","synonyms":[{"name":"beta1 adrenoceptor","type":"exact"}],"termid":"GO:0004940"}


id: PBO:0087875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator; facilitates elongation through factors that modify RNAP II; role in peroxide resistance involving Rad2p; role in nonhomologous end-joining (NHEJ) of ds breaks in plasmid DNA, but not chromosomal DNA; role in the hyperosmotic stress response through polymerase recruitment at RNAP II and RNAP III genes; negatively regulates sporulation; protein abundance increases in response to DNA replication stress; functionally complemented by human SUB1 (PC4)","termid":"PBO:0087875"}


id: PBO:0050867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 4","termid":"PBO:0050867"}


id: PBO:0030442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA_methylation","termid":"PBO:0030442"}


id: PR:Q96WV6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mucin-17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.02","secondary_identifiers":["UniProtKB:Q96WV6"],"synonyms":[{"name":"Spom972h-MUC17","type":"exact"}],"termid":"PR:Q96WV6"}


id: GO:0102057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-valine + ATP(4-) + a jasmonic acid = AMP(2-) + diphosphoric acid + a jasmonoyl-valine.","definition_xrefs":["GOC:pz","PMID:17291501"],"gene_count":0,"genotype_count":0,"name":"obsolete jasmonoyl-valine synthetase activity (obsolete GO:0102057)","termid":"GO:0102057"}


id: GO:0070425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway (NLR) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070424"},{"relation_name":"negatively_regulates","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","synonyms":[{"name":"negative regulation of NOD signaling pathway","type":"narrow"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing signaling pathway","type":"narrow"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing signalling pathway","type":"narrow"}],"termid":"GO:0070425"}


id: PR:Q10180
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug113 gene.","definition_xrefs":["UniProtKB:Q10180","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 113 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.05c","synonyms":[{"name":"Spom972h-mug113","type":"exact"}],"termid":"PR:Q10180"}


id: PBO:0039902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF4 antisense RNA 1","termid":"PBO:0039902"}


id: PBO:0068810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 47, pseudogene","termid":"PBO:0068810"}


id: PBO:0052656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 24","termid":"PBO:0052656"}


id: PBO:0061168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Leu (TAA) 6-1","termid":"PBO:0061168"}


id: PBO:0039768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 3 (Gill blood group)","termid":"PBO:0039768"}


id: GO:0072658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location in a membrane, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"},{"relation_name":"part_of","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in membrane","termid":"GO:0072658"}


id: GO:0015601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["EC:3.6.3.21","TC:3.A.1.3.10"],"gene_count":0,"genotype_count":0,"name":"obsolete cystine/diaminopimelate porter activity (obsolete GO:0015601)","synonyms":[{"name":"cystine/diaminopimelate porter activity","type":"exact"}],"termid":"GO:0015601"}


id: PBO:0051266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IgA inducing protein","termid":"PBO:0051266"}


id: GO:0002689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte chemotaxis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"negatively_regulates","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte chemotaxis","synonyms":[{"name":"down regulation of leukocyte chemotaxis","type":"exact"},{"name":"down-regulation of leukocyte chemotaxis","type":"exact"},{"name":"downregulation of leukocyte chemotaxis","type":"exact"},{"name":"inhibition of leukocyte chemotaxis","type":"narrow"},{"name":"negative regulation of immune cell chemotaxis","type":"exact"},{"name":"negative regulation of leucocyte chemotaxis","type":"exact"}],"termid":"GO:0002689"}


id: GO:0003116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of norepinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by norepinephrine","termid":"GO:0003116"}


id: GO:0051185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a coenzyme from one side of a membrane to the other. A coenzyme is any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme transmembrane transporter activity (obsolete GO:0051185)","synonyms":[{"name":"coenzyme transporter activity","type":"related"}],"termid":"GO:0051185"}


id: PR:Q8NIQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.18c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8NIQ1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C2F3.18c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.18c","synonyms":[{"name":"Spom972h-SPAC2F3.18c","type":"exact"}],"termid":"PR:Q8NIQ1"}


id: PBO:0049770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 8","termid":"PBO:0049770"}


id: PBO:0080608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 45","termid":"PBO:0080608"}


id: MOD:00672
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with an acylsulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-acylated residue","synonyms":[{"name":"SAcylRes","type":"exact"}],"termid":"MOD:00672"}


id: PBO:0081446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 304","termid":"PBO:0081446"}


id: PBO:0039578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and ubiquitin domain containing 1","termid":"PBO:0039578"}


id: PBO:0083249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by fungal homology and RT-PCR","termid":"PBO:0083249"}


id: MOD:01658
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 4-(4-dimethylaminophenylazo)benzenesulfonyl chloride, dabsyl chloride, to form an alpha-amino-Dabsyl-derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dabsyl chloride derivatized residue","termid":"MOD:01656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dabsyl derivatized residue","synonyms":[{"name":"N2DabsylRes","type":"exact"}],"termid":"MOD:01658"}


id: GO:0140535
data:
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id: PBO:0054793
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id: PR:Q10250
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id: PomGeneEx:0000013
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id: PBO:0109120
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id: PBO:0055604
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id: GO:0052414
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id: PBO:0089383
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id: GO:0018903
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id: GO:0051712
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id: GO:0047595
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id: PBO:0057057
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id: PBO:0005100
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id: FYPO:0007227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal in centromeric regions.","definition_xrefs":["PMID:31822915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of R-loops","termid":"FYPO:0007901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of R-loops at centromere","synonyms":[{"name":"increased RNA-DNA hybrid level at centromere","type":"exact"},{"name":"increased level of DNA:RNA hybrids at centromere","type":"exact"},{"name":"increased level of RNA-DNA hybrids at centromere","type":"exact"},{"name":"increased level of RNA-DNA hybrids at centromere during mitotic cell cycle","type":"related"},{"name":"increased level of RNA-DNA hybrids at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007227"}


id: GO:0039013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pronephric nephron distal tubule are generated and organized. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"},{"relation_name":"is_a","term_name":"distal tubule morphogenesis","termid":"GO:0072156"},{"relation_name":"part_of","term_name":"pronephric distal tubule development","termid":"GO:0035777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric distal tubule morphogenesis","termid":"GO:0039013"}


id: PBO:0059989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 9","termid":"PBO:0059989"}


id: PBO:0046999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A2, pseudogene","termid":"PBO:0046999"}


id: GO:0015608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carbohydrate(out) -> ADP + phosphate + carbohydrate(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"carbohydrate-importing ABC transporter activity","secondary_identifiers":["TC:3.A.1.1.1"],"synonyms":[{"name":"carbohydrate uptake transporter activity","type":"exact"},{"name":"carbohydrate-importing ATPase activity","type":"broad"},{"name":"sugar transporter","type":"narrow"}],"termid":"GO:0015608"}


id: PBO:0073624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 10","termid":"PBO:0073624"}


id: PR:P41412
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- res2 gene.","definition_xrefs":["UniProtKB:P41412","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle-related protein res2/pct1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.09c","synonyms":[{"name":"Spom972h-res2","type":"exact"}],"termid":"PR:P41412"}


id: FYPO:0003077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of autophosphorylation of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"},{"relation_name":"is_a","term_name":"abnormal protein autophosphorylation during vegetative growth","termid":"FYPO:0003019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein autophosphorylation during vegetative growth","synonyms":[{"name":"increased protein autophosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003077"}


id: GO:0006903
data:
  {"annotated_genes":["SJAG_03938","SJAG_02320","SJAG_04391","SJAG_03268","SJAG_03005","SJAG_00284","SJAG_01925","SJAG_04044","SJAG_04960","SJAG_02166","SJAG_03864","SJAG_03357"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113854,89350],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91658],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[114542],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[84796,110287,110005,95681,98055,86894,113839,114938],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes. Targeting involves coordinated interactions among cytoskeletal elements (microtubules or actin filaments), motor proteins, molecules at the vesicle membrane and target membrane surfaces, and vesicle cargo.","definition_xrefs":["GOC:mah","PMID:17335816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"part_of","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_03005":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"vesicle targeting","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006903","terms_by_termid":{"GO:0048205":null,"GO:0048208":null,"GO:0090522":null,"GO:0099022":null}}


id: PBO:0084859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; required for respiration and for maintenance of the mitochondrial genome","termid":"PBO:0084859"}


id: GO:0141116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont prevents host complement activation by sequestering it away from its surface.","definition_xrefs":["PMID:18323455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by complement sequestering","synonyms":[{"name":"suppression of complement activation by another organism by complement sequestering","type":"broad"}],"termid":"GO:0141116"}


id: PBO:0054734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2143","termid":"PBO:0054734"}


id: FYPO:0005338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to HU","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005338"}


id: PBO:0040158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit family member 4","termid":"PBO:0040158"}


id: GO:0070897
data:
  {"annotated_genes":["SJAG_01707","SJAG_03007","SJAG_02458","SJAG_01808","SJAG_02813","SJAG_01523","SJAG_01475","SJAG_03900","SJAG_00741","SJAG_03120","SJAG_00766","SJAG_03095","SJAG_03956","SJAG_04654","SJAG_03285","SJAG_02691","SJAG_04274","SJAG_01771","SJAG_02174","SJAG_00692"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85865,111315],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[63535,91885,105282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001188"},{"annotations":[113462,86065,84514,83558,92173,111507,66541,64343,104624,84774,85435,110925,90282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051123"},{"annotations":[99204,112340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070898"}]},"cv_name":"biological_process","definition":"The formation of a large multiprotein-DNA complex that self-assembles on gene promoter through the sequential recruitment of the general initiation factors that compose the preinitiation complex (PIC). The PIC engages the RNA polymerase on its DNA template strand and sparks polymerization of the first few RNA nucleotides.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00692":null,"SJAG_00741":null,"SJAG_00766":null,"SJAG_01475":null,"SJAG_01523":null,"SJAG_01707":null,"SJAG_01771":null,"SJAG_01808":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02691":null,"SJAG_02813":null,"SJAG_03007":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03285":null,"SJAG_03900":null,"SJAG_03956":null,"SJAG_04274":null,"SJAG_04654":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006351","GO:0065003","GO:0010467"],"is_obsolete":false,"name":"transcription preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0001126"],"synonyms":[{"name":"DNA-dependent transcriptional preinitiation complex assembly","type":"exact"},{"name":"DNA-templated transcriptional preinitiation complex assembly","type":"exact"},{"name":"bacterial-type RNA polymerase preinitiation complex assembly","type":"narrow"},{"name":"bacterial-type RNA polymerase transcription PIC formation","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional preinitiation complex formation","type":"narrow"},{"name":"transcription PIC biosynthesis","type":"broad"},{"name":"transcription PIC formation","type":"broad"},{"name":"transcriptional preinitiation complex formation","type":"broad"}],"termid":"GO:0070897","terms_by_termid":{"GO:0001188":null,"GO:0045899":null,"GO:0051123":null,"GO:0070898":null}}


id: PBO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-J-shaped_vegetative_cell","termid":"PBO:0036016"}


id: GO:0051907
data:
  {"annotated_genes":["SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91679],"is_not":false,"summary":null,"term":"GO:0051907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione = formaldehyde + glutathione.","definition_xrefs":["EC:4.4.1.22","RHEA:22488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R06982","MetaCyc:RXN-2961","UM-BBD_reactionID:r1145"],"synonyms":[{"name":"Gfa","type":"related"},{"name":"S-(hydroxymethyl)glutathione formaldehyde-lyase (glutathione-forming)","type":"related"},{"name":"S-(hydroxymethyl)glutathione formaldehyde-lyase activity","type":"related"},{"name":"glutathione-dependent formaldehyde-activating enzyme activity","type":"exact"}],"termid":"GO:0051907","terms_by_termid":{"GO:0051907":null}}


id: PBO:0066618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin Rho GTPase binding protein 2 pseudogene 1","termid":"PBO:0066618"}


id: PBO:0039872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP29 antisense RNA 1","termid":"PBO:0039872"}


id: GO:0050492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + sn-glycerol-1-phosphate = NAD(P)H + H+ + dihydroxy-acetone-phosphate.","definition_xrefs":["EC:1.1.1.261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glycerol-1-phosphate dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:1.1.1.261-RXN"],"synonyms":[{"name":"sn-glycerol-1-phosphate:NAD(P)+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0050492"}


id: GO:0070662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mast cell population by cell division.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell proliferation","termid":"GO:0070662"}


id: GO:1990558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which malonate(1-) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malonic acid transmembrane transport","termid":"GO:1901553"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"mitochondrial malonate(1-) transmembrane transport","termid":"GO:1990558"}


id: PBO:0044193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin B","termid":"PBO:0044193"}


id: SO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The location of DNA that has come from a viral origin.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_location","termid":"SO:0000735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proviral_location","synonyms":[{"name":"proviral location","type":"exact"}],"termid":"SO:0000751"}


id: PBO:0052064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 6A","termid":"PBO:0052064"}


id: PBO:0042831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin 4, pseudogene","termid":"PBO:0042831"}


id: PBO:0081593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 518B","termid":"PBO:0081593"}


id: GO:0106247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of poly(A)-specific ribonuclease activity.","definition_xrefs":["PMID:29932902","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of poly(A)-specific ribonuclease activity","termid":"GO:0106246"},{"relation_name":"is_a","term_name":"negative regulation of exoribonuclease activity","termid":"GO:1901918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of poly(A)-specific ribonuclease activity","termid":"GO:0106247"}


id: PBO:0040309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 1","termid":"PBO:0040309"}


id: GO:0005969
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of hydroxypyruvate and alanine from serine and pyruvate.","definition_xrefs":["EC:2.6.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"serine-pyruvate aminotransferase complex","secondary_identifiers":["GO:0005970"],"synonyms":[{"name":"serine-pyruvate aminotransferase, type 1 complex","type":"narrow"},{"name":"serine-pyruvate aminotransferase, type 2B complex","type":"narrow"}],"termid":"GO:0005969"}


id: GO:0180036
data:
  {"annotated_genes":["SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114216],"is_not":false,"summary":null,"term":"GO:0180036"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant lncRNAs within the nucleus.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear lncRNA surveillance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180036","terms_by_termid":{"GO:0180036":null}}


id: FYPO:0009094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing lysine and proline as the nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002058","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on lysine and proline nitrogen source","synonyms":[{"name":"increased vegetative cell growth on lysine and proline nitrogen source","type":"exact"}],"termid":"FYPO:0009094"}


id: GO:0035608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a glutamate residue from a protein. Glutamate residues in proteins can be gene-encoded, or added as side chains during the protein modification process of polyglutamylation.","definition_xrefs":["GOC:sp","PMID:21074048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglutamylation","synonyms":[{"name":"protein amino acid deglutamylation","type":"exact"}],"termid":"GO:0035608"}


id: PBO:0042140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCL3 antisense RNA 1","termid":"PBO:0042140"}


id: PBO:0055450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2882","termid":"PBO:0055450"}


id: GO:0032516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a phosphoprotein phosphatase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"},{"relation_name":"is_a","term_name":"positive regulation of protein dephosphorylation","termid":"GO:0035307"},{"relation_name":"is_a","term_name":"regulation of phosphoprotein phosphatase activity","termid":"GO:0043666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphoprotein phosphatase activity","secondary_identifiers":["GO:0032514","GO:0034049"],"synonyms":[{"name":"activation of calcineurin activity","type":"narrow"},{"name":"activation of phosphoprotein phosphatase activity","type":"narrow"},{"name":"activation of protein phosphatase 3 activity","type":"related"},{"name":"activation of protein phosphatase type 2A activity","type":"narrow"},{"name":"activation of protein phosphatase type 2B activity","type":"narrow"},{"name":"calcineurin activation","type":"narrow"},{"name":"positive regulation of calcineurin activity","type":"narrow"},{"name":"positive regulation of protein phosphatase 2 activity","type":"related"},{"name":"positive regulation of protein phosphatase 3 activity","type":"related"},{"name":"positive regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"positive regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"stimulation of phosphoprotein phosphatase activity","type":"narrow"},{"name":"stimulation of protein phosphatase 2 activity","type":"related"},{"name":"stimulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"stimulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"up regulation of calcineurin activity","type":"narrow"},{"name":"up regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"up regulation of protein phosphatase 2 activity","type":"related"},{"name":"up regulation of protein phosphatase 3 activity","type":"related"},{"name":"up regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"up regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"up-regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"up-regulation of protein phosphatase 2 activity","type":"related"},{"name":"up-regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"up-regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"upregulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"upregulation of protein phosphatase 2 activity","type":"related"},{"name":"upregulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"upregulation of protein phosphatase type 2B activity","type":"narrow"}],"termid":"GO:0032516"}


id: PBO:0058278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4655","termid":"PBO:0058278"}


id: GO:0032744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-20 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-20 production","termid":"GO:0032664"},{"relation_name":"positively_regulates","term_name":"interleukin-20 production","termid":"GO:0032624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-20 production","secondary_identifiers":["GO:0045389"],"synonyms":[{"name":"activation of interleukin-20 production","type":"narrow"},{"name":"positive regulation of IL-20 production","type":"exact"},{"name":"positive regulation of interleukin-20 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-20 production","type":"narrow"},{"name":"up regulation of interleukin-20 production","type":"exact"},{"name":"up-regulation of interleukin-20 production","type":"exact"},{"name":"upregulation of interleukin-20 production","type":"exact"}],"termid":"GO:0032744"}


id: PBO:0113240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear-enriched ubiquitin-like polyubiquitin-binding protein; K48-Ub chain binding protein that also binds K63-linked chains in vitro; required for spindle pole body (SPB) duplication and for transit through the G2/M phase of the cell cycle; involved in proteolysis; interacts with the proteasome; contains an N-terminal Ub-like (UBL) and a C-terminal Ub-associated (UBA) domain; protein abundance increases in response to DNA replication stress","termid":"PBO:0113240"}


id: PBO:0088085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX (ubiquitin regulatory X) domain-containing protein; interacts with Cdc48p, transcription is repressed when cells are grown in media containing inositol and choline; UBX6 has a paralog, UBX7, that arose from the whole genome duplication","termid":"PBO:0088085"}


id: GO:0010967
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107301],"is_not":false,"summary":null,"term":"GO:0010967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polyamine biosynthesis. Polyamine biosynthesis is the chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"polyamine biosynthetic process","termid":"GO:0006596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of polyamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010967","terms_by_termid":{"GO:0010967":null}}


id: GO:0019016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome that consists of one continuous nucleic acid molecule.","definition_xrefs":["GOC:pk"],"gene_count":0,"genotype_count":0,"name":"obsolete non-segmented viral genome (obsolete GO:0019016)","termid":"GO:0019016"}


id: PBO:0080408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37B subunit of ESCRT-I","termid":"PBO:0080408"}


id: PBO:0053466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 428","termid":"PBO:0053466"}


id: GO:0010792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang that results in the repair of a double strand break via single-strand annealing.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA double-strand break processing","termid":"GO:0000729"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA double-strand break processing involved in repair via single-strand annealing","termid":"GO:0010792"}


id: FYPO:0002264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of one or more polysaccharides released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"increased concentration of polysaccharide in growth medium","synonyms":[{"name":"increased concentration of polysaccharides in growth medium","type":"exact"},{"name":"increased level of polysaccharide in growth medium","type":"exact"},{"name":"increased release of polysaccharide into growth medium","type":"related"}],"termid":"FYPO:0002264"}


id: PBO:0091922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Armadillo Sfi1 Interactor","termid":"PBO:0091922"}


id: PBO:0087534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II; Complex I is essential in autophagy, Complex II is required for vacuolar protein sorting; required for overflow degradation of misfolded proteins when ERAD is saturated; C-terminus has novel globular fold essential for autophagy through the targeting of the PI3-kinase complex I to the pre-autophagosomal structure; ortholog of higher eukaryote gene Beclin 1; human BECN1 can complement yeast null mutant","termid":"PBO:0087534"}


id: PBO:0045210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C5","termid":"PBO:0045210"}


id: GO:0102505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: apigeninidin + UDP-alpha-D-glucose = apigeninidin 5-O-glucoside + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"apigeninidin 5-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14427"],"termid":"GO:0102505"}


id: GO:0048775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leucophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"leucophore differentiation","termid":"GO:0048772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leucophore differentiation","termid":"GO:0048775"}


id: GO:0102061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-cis-farnesyl diphosphate = (+)-endo-beta-bergamotene + diphosphoric acid.","definition_xrefs":["RHEA:30467","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"endo-beta-bergamotene synthase activity","secondary_identifiers":["EC:4.2.3.53","MetaCyc:RXN-10483"],"synonyms":[{"name":"(+)-endo-beta-bergamotene synthase ((2Z,6Z)-farnesyl diphosphate cyclizing)","type":"exact"},{"name":"(2Z,6Z)-farnesyl diphosphate = (+)-endo-beta-bergamotene","type":"exact"},{"name":"endo-beta-bergamontene synthase activity","type":"exact"}],"termid":"GO:0102061"}


id: GO:0008194
data:
  {"annotated_genes":["SJAG_04821","SJAG_02804","SJAG_02913","SJAG_00129","SJAG_01862","SJAG_00182","SJAG_04184","SJAG_04868","SJAG_03066","SJAG_03311","SJAG_02222","SJAG_00876","SJAG_05285","SJAG_01028","SJAG_00394","SJAG_06383","SJAG_00183","SJAG_01531","SJAG_02916","SJAG_04881","SJAG_00442","SJAG_04571","SJAG_01646","SJAG_04236","SJAG_01427","SJAG_03057","SJAG_03587","SJAG_01288","SJAG_04119"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102225,90603,109302,111948,87730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[73476,97194,89473,87986,92667,93289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[110514,113904,85305,100309,105206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047657"},{"annotations":[111949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[100784,84877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004100"},{"annotations":[107215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[101883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"},{"annotations":[94485,94818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004577"},{"annotations":[89210,89119,104714,107729,106058,113358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017176"},{"annotations":[109904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glycosyl group from a UDP-sugar to a small hydrophobic molecule.","definition_xrefs":["PMID:11846783","InterPro:IPR004224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_00183":null,"SJAG_00394":null,"SJAG_00442":null,"SJAG_00876":null,"SJAG_01028":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02222":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03066":null,"SJAG_03311":null,"SJAG_03587":null,"SJAG_04119":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04571":null,"SJAG_04821":null,"SJAG_04868":null,"SJAG_04881":null,"SJAG_05285":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"UDP-glycosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162730"],"termid":"GO:0008194","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004100":null,"GO:0004577":null,"GO:0004581":null,"GO:0017176":null,"GO:0047220":null,"GO:0047657":null,"GO:0140752":null}}


id: PBO:0027725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_fusion","termid":"PBO:0027725"}


id: PBO:0034375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-does_not_overlap_sequence_of","termid":"PBO:0034375"}


id: GO:1902336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retinal ganglion cell axon guidance.","definition_xrefs":["PMID:21658587","GOC:BHF","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinal ganglion cell axon guidance","termid":"GO:0090259"},{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"positively_regulates","term_name":"retinal ganglion cell axon guidance","termid":"GO:0031290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retinal ganglion cell axon guidance","synonyms":[{"name":"activation of retinal ganglion cell axon guidance","type":"narrow"},{"name":"activation of retinal ganglion cell axon pathfinding","type":"narrow"},{"name":"positive regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"up regulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"up regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"up-regulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"up-regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"upregulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"upregulation of retinal ganglion cell axon pathfinding","type":"exact"}],"termid":"GO:1902336"}


id: GO:0032373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"positively_regulates","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of sterol transport","synonyms":[{"name":"activation of sterol transport","type":"narrow"},{"name":"stimulation of sterol transport","type":"narrow"},{"name":"up regulation of sterol transport","type":"exact"},{"name":"up-regulation of sterol transport","type":"exact"},{"name":"upregulation of sterol transport","type":"exact"}],"termid":"GO:0032373"}


id: GO:0061706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose into pyruvate through both glucose and fructose intermediates, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.","definition_xrefs":["GOC:dph","MetaCyc:PWY-1042","GOC:glycolysis","PMID:15012287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"},{"relation_name":"is_a","term_name":"glycolytic process from sucrose","termid":"GO:0061704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0055086","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"glycolytic process from sucrose through glucose and fructose","termid":"GO:0061706"}


id: GO:0044525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-cystine residue in a protein by the addition of sulfur, to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sulfhydration","termid":"GO:0044524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cystine sulfhydration","termid":"GO:0044525"}


id: PBO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-S isoprenylcysteine O-methyltransferase Mam4","termid":"PBO:0000852"}


id: GO:0045769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asymmetric cell division","termid":"GO:0009786"},{"relation_name":"is_a","term_name":"negative regulation of cell division","termid":"GO:0051782"},{"relation_name":"negatively_regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asymmetric cell division","synonyms":[{"name":"down regulation of asymmetric cell division","type":"exact"},{"name":"down-regulation of asymmetric cell division","type":"exact"},{"name":"downregulation of asymmetric cell division","type":"exact"},{"name":"inhibition of asymmetric cell division","type":"narrow"}],"termid":"GO:0045769"}


id: GO:0046780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the splicing of host mRNA, thus interfering with normal host protein production. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19729513","PMID:12660167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA splicing","termid":"GO:0033119"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host mRNA processing","termid":"GO:0039524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA splicing","secondary_identifiers":["GO:0046781"],"synonyms":[{"name":"negative regulation by virus of host mRNA splicing","type":"narrow"},{"name":"suppression by virus of host mRNA splicing","type":"narrow"},{"name":"suppression by virus of host splicing factor activity","type":"exact"},{"name":"viral dispersion of host splicing factors","type":"narrow"},{"name":"viral inhibition of host mRNA splicing","type":"narrow"}],"termid":"GO:0046780"}


id: FYPO:0004979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one septum, is longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"monoseptate","termid":"FYPO:0001225"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"elongated monoseptate vegetative cell","synonyms":[{"name":"elongated monoseptate cell during mitotic cell cycle","type":"related"},{"name":"elongated monoseptate cell during vegetative growth","type":"exact"},{"name":"long monoseptate cell","type":"exact"}],"termid":"FYPO:0004979"}


id: PBO:0046390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1A binding protein p400","termid":"PBO:0046390"}


id: SO:0001427
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A structural region in an RNA molecule which promotes ribosomal frameshifting of cis coding sequence.","definition_xrefs":["RFAM:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis_regulatory_frameshift_element","synonyms":[{"name":"cis regulatory frameshift element","type":"exact"}],"termid":"SO:0001427"}


id: GO:0060316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051281"},{"relation_name":"is_a","term_name":"regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060314"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060316"}


id: PBO:0090099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Stx8","termid":"PBO:0090099"}


id: FYPO:0003598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is decreased.","definition_xrefs":["GO:0034472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal snRNA 3'-end processing","termid":"FYPO:0003596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"decreased snRNA 3'-end processing","synonyms":[{"name":"decreased snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"decreased snRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"reduced snRNA 3'-end processing","type":"exact"}],"termid":"FYPO:0003598"}


id: PBO:0053890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1170","termid":"PBO:0053890"}


id: PBO:0083621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2 ubiquitin-conjugating enzyme; involved in the error-free DNA postreplication repair pathway; interacts with Mms2p to assemble ubiquitin chains at the Ub Lys-63 residue; DNA damage triggers redistribution from the cytoplasm to the nucleus","termid":"PBO:0083621"}


id: PBO:0055301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2728","termid":"PBO:0055301"}


id: GO:0072058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the outer stripe over time, from its formation to the mature structure. The outer stripe is the region of the kidney outer medulla that lies just below the cortex. The proximal straight tubules (S3) characterize this region.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"renal outer medulla development","termid":"GO:0072054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer stripe development","termid":"GO:0072058"}


id: GO:0006148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine metabolic process","termid":"GO:0046102"},{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inosine catabolic process","synonyms":[{"name":"inosine breakdown","type":"exact"},{"name":"inosine catabolism","type":"exact"},{"name":"inosine degradation","type":"exact"}],"termid":"GO:0006148"}


id: PBO:0089419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, possible chaperone","termid":"PBO:0089419"}


id: PBO:0040184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic peptidase retroviral like 1","termid":"PBO:0040184"}


id: GO:0031287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sorocarp stalk cell differentiation. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:kp","GOC:mtg_sensu","PMID:4338436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sorocarp stalk cell differentiation","termid":"GO:0031285"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"positively_regulates","term_name":"sorocarp stalk cell differentiation","termid":"GO:0031149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sorocarp stalk cell differentiation","synonyms":[{"name":"activation of stalk cell differentiation","type":"narrow"},{"name":"positive regulation of stalk cell differentiation","type":"exact"},{"name":"stimulation of stalk cell differentiation","type":"narrow"},{"name":"up regulation of stalk cell differentiation","type":"exact"},{"name":"up-regulation of stalk cell differentiation","type":"exact"},{"name":"upregulation of stalk cell differentiation","type":"exact"}],"termid":"GO:0031287"}


id: GO:0010921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or frequency of phosphatase activity. Phosphatases catalyze the hydrolysis of phosphoric monoesters, releasing phosphate.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dephosphorylation","termid":"GO:0035303"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatase activity","termid":"GO:0010921"}


id: GO:0019598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (R)-mandelate into other compounds, including catechol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"mandelate catabolic process","termid":"GO:0019596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(R)-mandelate catabolic process to catechol","synonyms":[{"name":"(R)-mandelate breakdown to catechol","type":"exact"},{"name":"(R)-mandelate degradation to catechol","type":"exact"}],"termid":"GO:0019598"}


id: PBO:0068451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 27, pseudogene","termid":"PBO:0068451"}


id: SO:0000680
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A start codon that is not the usual AUG sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"start_codon","termid":"SO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_canonical_start_codon","synonyms":[{"name":"non ATG start codon","type":"exact"},{"name":"non canonical start codon","type":"exact"},{"name":"non-canonical start codon","type":"exact"}],"termid":"SO:0000680"}


id: _global:gene_product_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"definition \\\"x has gene product of y if and only if y is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from x\\\"","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"_global:genomically_related_to"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_of","secondary_identifiers":["RO:0002204","GOREL:0001028"],"termid":"_global:gene_product_of"}


id: PR:Q9P371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sst2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMSH-like protease sst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.10","synonyms":[{"name":"Spom972h-sst2","type":"exact"},{"name":"suppressor of ste12 deletion protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P371"}


id: GO:1901750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene D4.","definition_xrefs":["UniPathway:UPA00880","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"leukotriene D4 metabolic process","termid":"GO:1901748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"leukotriene D4 biosynthetic process","synonyms":[{"name":"leukotriene D4 anabolism","type":"exact"},{"name":"leukotriene D4 biosynthesis","type":"exact"},{"name":"leukotriene D4 formation","type":"exact"},{"name":"leukotriene D4 synthesis","type":"exact"}],"termid":"GO:1901750"}


id: PBO:0078621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 69","termid":"PBO:0078621"}


id: PBO:0071416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 22","termid":"PBO:0071416"}


id: PBO:0079811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glycosyltransferase 8","termid":"PBO:0079811"}


id: SO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of sequence surrounding a transposable element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanking_region","termid":"SO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_flanking_region","synonyms":[{"name":"transposable element flanking region","type":"exact"}],"termid":"SO:0000364"}


id: PBO:0073007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 7","termid":"PBO:0073007"}


id: GO:0036275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 5-fluorouracil stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 5-fluorouracil","synonyms":[{"name":"response to 5-fluoropyrimidine-2,4(1H,3H)-dione","type":"exact"},{"name":"response to fluorouracil","type":"exact"}],"termid":"GO:0036275"}


id: PBO:0064965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 18","termid":"PBO:0064965"}


id: PBO:0078717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 2-1","termid":"PBO:0078717"}


id: FYPO:0009065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased resistance to a combination of X-rays and ramapycin.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"},{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to X-rays and rapamycin during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth when treated with rapamycin and X-rays","type":"exact"},{"name":"resistant to X-rays and rapamycin during vegetative growth","type":"exact"}],"termid":"FYPO:0009065"}


id: GO:0000404
data:
  {"annotated_genes":["SJAG_01419","SJAG_01262","SJAG_02226"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96718,102061,102194],"is_not":false,"summary":null,"term":"GO:0000404"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment containing a loop. A loop occurs when DNA contains a large insertion or deletion that causes a region of unpaired single-stranded DNA to loop out, while the rest of the DNA is in a paired double-stranded configuration.","definition_xrefs":["PMID:16781730","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"},{"relation_name":"is_a","term_name":"DNA insertion or deletion binding","termid":"GO:0032135"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01262":null,"SJAG_01419":null,"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"heteroduplex DNA loop binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"loop DNA binding","type":"related"}],"termid":"GO:0000404","terms_by_termid":{"GO:0000404":null}}


id: PBO:0065634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 3","termid":"PBO:0065634"}


id: PBO:0088171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xanthine-guanine phosphoribosyl transferase; required for xanthine utilization and for optimal utilization of guanine","termid":"PBO:0088171"}


id: PBO:0057635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1225","termid":"PBO:0057635"}


id: FYPO:0002701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to torin1. Cells stop growing (and may die) at a concentration of torin1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to torin1","synonyms":[{"name":"hypersensitive to torin1","type":"exact"},{"name":"sensitive to torin 1","type":"exact"},{"name":"sensitive to torin1 during mitotic cell cycle","type":"related"},{"name":"sensitive to torin1 during vegetative growth","type":"exact"}],"termid":"FYPO:0002701"}


id: GO:1900930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-tyrosine import into the cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-tyrosine import across plasma membrane","termid":"GO:1900929"},{"relation_name":"negatively_regulates","term_name":"L-tyrosine import across plasma membrane","termid":"GO:1903808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-tyrosine import across plasma membrane","synonyms":[{"name":"down regulation of L-tyrosine import","type":"exact"},{"name":"down regulation of L-tyrosine uptake","type":"related"},{"name":"down-regulation of L-tyrosine import","type":"exact"},{"name":"down-regulation of L-tyrosine uptake","type":"related"},{"name":"downregulation of L-tyrosine import","type":"exact"},{"name":"downregulation of L-tyrosine uptake","type":"related"},{"name":"inhibition of L-tyrosine import","type":"narrow"},{"name":"inhibition of L-tyrosine uptake","type":"related"},{"name":"negative regulation of L-tyrosine import","type":"broad"},{"name":"negative regulation of L-tyrosine uptake","type":"related"}],"termid":"GO:1900930"}


id: SO:0000207
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"SSLP are a kind of sequence alteration where the number of repeated sequences in intergenic regions may differ.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_alteration","termid":"SO:0000248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simple_sequence_length_variation","secondary_identifiers":["http://en.wikipedia.org/wiki/Simple_sequence_length_polymorphism"],"synonyms":[{"name":"SSLP","type":"related"},{"name":"simple sequence length polymorphism","type":"related"},{"name":"simple sequence length variation","type":"exact"}],"termid":"SO:0000207"}


id: PBO:0089393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic60","termid":"PBO:0089393"}


id: MOD:00195
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-alanine residue and a glycine residue to form L-alanine 5-imidazolinone glycine.","definition_xrefs":["PubMed:10220322","RESID:AA0187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-alanine residue","termid":"MOD:02040"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1-aminoethyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[1-aminoethyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"4-methylidene-imidazole-5-one active site","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Ala-Gly)","type":"exact"},{"name":"L-alanine 5-imidazolinone glycine","type":"exact"},{"name":"XLNK-1Ala-NGly(Imidazole)","type":"exact"},{"name":"alanyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00195"}


id: GO:0102349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetracosanoyl-CoA + NADP = trans-2-tetracosenoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-lignocero-2-enoyl-CoA reductase activity (obsolete GO:0102349)","termid":"GO:0102349"}


id: PATO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter X.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"x-shaped","termid":"PATO:0002429"}


id: PBO:0064055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 89","termid":"PBO:0064055"}


id: GO:0170038
data:
  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id: FYPO:0007421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal in telomeric regions during G0 phase. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"},{"relation_name":"is_a","term_name":"abnormal transcription at telomere","termid":"FYPO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription at telomere during G0","synonyms":[{"name":"increased telomeric transcription during G0","type":"exact"},{"name":"increased transcription at telomere during cell quiescence","type":"exact"},{"name":"increased transcription at telomere during quiescence","type":"exact"},{"name":"increased transcription from telomere during G0","type":"exact"}],"termid":"FYPO:0007421"}


id: GO:0033922
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing N-acetylmuramic residues.","definition_xrefs":["EC:3.2.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptidoglycan beta-N-acetylmuramidase activity","secondary_identifiers":["MetaCyc:3.2.1.92-RXN"],"synonyms":[{"name":"beta-2-acetamido-3-O-(D-1-carboxyethyl)-2-deoxy-D-glucoside acetamidodeoxyglucohydrolase activity","type":"related"},{"name":"exo-beta-N-acetylmuramidase activity","type":"related"},{"name":"exo-beta-acetylmuramidase activity","type":"related"},{"name":"peptidoglycan beta-N-acetylmuramoylexohydrolase activity","type":"related"}],"termid":"GO:0033922"}


id: SO:1000025
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from adenine to thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_to_pyrimidine_transversion","termid":"SO:1000023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_to_T_transversion","synonyms":[{"name":"A to T transversion","type":"exact"}],"termid":"SO:1000025"}


id: PBO:0031421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_morphology","termid":"PBO:0031421"}


id: PBO:0075428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 17","termid":"PBO:0075428"}


id: PBO:0079254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 24","termid":"PBO:0079254"}


id: PBO:0109916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase I Gls1","termid":"PBO:0109916"}


id: PBO:0078018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 8","termid":"PBO:0078018"}


id: SO:0000321
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with a plus 1 frameshift.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"plus_1_frameshift","termid":"SO:0000868"},{"relation_name":"is_a","term_name":"mRNA_with_frameshift","termid":"SO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_plus_1_frameshift","synonyms":[{"name":"mRNA with plus 1 frameshift","type":"exact"}],"termid":"SO:0000321"}


id: PBO:0061963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 42","termid":"PBO:0061963"}


id: PBO:0052275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5C","termid":"PBO:0052275"}


id: GO:0060036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of a vacuole within a cell of the notochord.","definition_xrefs":["PMID:10964477","GOC:cb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"},{"relation_name":"part_of","term_name":"notochord cell development","termid":"GO:0060035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord cell vacuolation","termid":"GO:0060036"}


id: PBO:0075954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducing adaptor molecule 2","termid":"PBO:0075954"}


id: PBO:0048218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric cancer associated transcript 2","termid":"PBO:0048218"}


id: PBO:0051692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit B","termid":"PBO:0051692"}


id: GO:0140211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: folic acid(out) + H+(out) = folic acid(in) + H+(in). The main folic acid symporter is the Proton-Coupled Folate Transporter (PCFT/SLC46A1), which has similar affinity for transport of reduced folates (5-methyl THF, 5-formyl THF) and folic acid.","definition_xrefs":["PMID:24745983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"folic acid:proton symporter activity","secondary_identifiers":["TC:2.A.1.50.1"],"termid":"GO:0140211"}


id: GO:1990626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The membrane organization process that joins two mitochondrial outer membranes to form a single membrane.","definition_xrefs":["PMID:21385840","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane organization","termid":"GO:0007008"},{"relation_name":"part_of","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"mitochondrial outer membrane fusion","synonyms":[{"name":"mitochondrion outer membrane fusion","type":"exact"}],"termid":"GO:1990626"}


id: GO:1904002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sebum secreting cell proliferation.","definition_xrefs":["PMID:16901790","GO_REF:0000058","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"sebum secreting cell proliferation","termid":"GO:1990654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sebum secreting cell proliferation","synonyms":[{"name":"regulation of sebocyte proliferation","type":"related"}],"termid":"GO:1904002"}


id: PBO:0028823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology","termid":"PBO:0028823"}


id: PBO:0027898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_siRNA_level","termid":"PBO:0027898"}


id: GO:0090014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a leaflet from unspecified parts. A leaflet is one of the ultimate segments of a compound leaf.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaflet formation","termid":"GO:0090014"}


id: GO:1900158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bone mineralization involved in bone maturation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of bone mineralization","termid":"GO:0030502"},{"relation_name":"is_a","term_name":"regulation of bone mineralization involved in bone maturation","termid":"GO:1900157"},{"relation_name":"negatively_regulates","term_name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone mineralization involved in bone maturation","synonyms":[{"name":"down regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"down-regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"downregulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"inhibition of bone mineralization involved in bone maturation","type":"narrow"}],"termid":"GO:1900158"}


id: PBO:0075085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 135","termid":"PBO:0075085"}


id: PBO:0067156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 208, pseudogene","termid":"PBO:0067156"}


id: PBO:0057052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 138-1","termid":"PBO:0057052"}


id: FYPO:0004170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in centromeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0007886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"abolished centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 dimethylation at centromeric region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at centromere during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0004170"}


id: GO:0045872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of rhodopsin gene expression.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of rhodopsin gene expression (obsolete GO:0045872)","synonyms":[{"name":"activation of rhodopsin gene activity","type":"narrow"},{"name":"positive regulation of rhodopsin gene activity","type":"exact"},{"name":"stimulation of rhodopsin gene activity","type":"narrow"},{"name":"up regulation of rhodopsin gene activity","type":"exact"},{"name":"up-regulation of rhodopsin gene activity","type":"exact"},{"name":"upregulation of rhodopsin gene activity","type":"exact"}],"termid":"GO:0045872"}


id: PBO:0000527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G-protein signaling Rgs1","termid":"PBO:0000527"}


id: FYPO:0002768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination during vegetative growth","termid":"FYPO:0000905"},{"relation_name":"is_a","term_name":"decreased protein ubiquitination","termid":"FYPO:0007946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein ubiquitination during vegetative growth","synonyms":[{"name":"decreased protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"decreased protein ubiquitinylation during vegetative growth","type":"exact"},{"name":"decreased protein ubiquitylation during vegetative growth","type":"exact"},{"name":"reduced protein ubiquitination during vegetative growth","type":"exact"}],"termid":"FYPO:0002768"}


id: GO:0070012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a peptide bond in an oligopeptide, i.e. a molecule containing a small number (2 to 20) of amino acid residues connected by peptide bonds.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0008233","GO:0003824","GO:0016787","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"oligopeptidase activity","termid":"GO:0070012"}


id: PR:P78827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ilv5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketol-acid reductoisomerase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.12","synonyms":[{"name":"Spom972h-ilv5","type":"exact"},{"name":"acetohydroxy-acid reductoisomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-keto-beta-hydroxylacyl reductoisomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78827"}


id: GO:0005575
data:
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