# terms

id: PBO:0084552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric regions; induced during alcoholic fermentation; induced by low temperature and also by anaerobic conditions; negatively regulated by oxygen and repressed by heme","termid":"PBO:0084552"}


id: PBO:0075340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase","termid":"PBO:0075340"}


id: PBO:0089232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I general transcription inititation factor subunit Rrn3","termid":"PBO:0089232"}


id: PBO:0079489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 9","termid":"PBO:0079489"}


id: PBO:0056687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 8","termid":"PBO:0056687"}


id: PBO:0028881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K36_methylation","termid":"PBO:0028881"}


id: PBO:0039927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF28 pseudogene 1","termid":"PBO:0039927"}


id: PBO:0045578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUT antisense RNA 1","termid":"PBO:0045578"}


id: PBO:0069682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 959, pseudogene","termid":"PBO:0069682"}


id: PR:Q9UT30
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- brr6 gene.","definition_xrefs":["UniProtKB:Q9UT30","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleus export protein brr6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.06","synonyms":[{"name":"Spom972h-brr6","type":"exact"}],"termid":"PR:Q9UT30"}


id: FYPO:0005144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of proteasome regulatory particle binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:16096059","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"decreased proteasome regulatory particle binding","synonyms":[{"name":"reduced proteasome regulatory particle binding","type":"exact"}],"termid":"FYPO:0005144"}


id: PBO:0045856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 46","termid":"PBO:0045856"}


id: GO:0046736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intentional, virally-encoded stimulation of a host humoral defense response to viral infection.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of humoral immune response in host by virus (obsolete GO:0046736)","synonyms":[{"name":"active induction of humoral immune response in host by virus","type":"related"},{"name":"active viral induction of humoral immune response in host","type":"exact"}],"termid":"GO:0046736"}


id: PBO:0113335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may have been brought into S. cerevisiae genome via horizontal transfer mediated by Ty1 retrotransposition","termid":"PBO:0113335"}


id: PBO:0028464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitotic_interphase","termid":"PBO:0028464"}


id: GO:0072429
data:
  {"annotated_genes":["SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100293],"is_not":false,"summary":null,"term":"GO:0072429"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of intra-S DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to intra-S DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intra-S DNA damage checkpoint effector process","type":"exact"},{"name":"response to signal involved in intra-S DNA damage checkpoint","type":"exact"}],"termid":"GO:0072429","terms_by_termid":{"GO:0072429":null}}


id: PR:Q09921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F7.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F7.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.10","synonyms":[{"name":"Spom972h-SPAC1F7.10","type":"exact"}],"termid":"PR:Q09921"}


id: PBO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein","termid":"PBO:0002380"}


id: PBO:0003833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsd90 protein","termid":"PBO:0003833"}


id: GO:0072705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mercaptoethanol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mercaptoethanol","termid":"GO:0072704"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mercaptoethanol","synonyms":[{"name":"cellular response to 2-sulfanylethanol","type":"exact"}],"termid":"GO:0072705"}


id: GO:0090066
data:
  {"annotated_genes":["SJAG_02532","SJAG_02566","SJAG_02019","SJAG_04100","SJAG_03401","SJAG_04668","SJAG_04332","SJAG_04982","SJAG_02700","SJAG_00409","SJAG_01805","SJAG_01993","SJAG_03086","SJAG_04479","SJAG_00279","SJAG_01894","SJAG_00521"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88454,110450,84429,95031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[101815,110060,91827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006884"},{"annotations":[88534,102618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"},{"annotations":[89936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045793"},{"annotations":[86824,101282,97885,85984,98876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[90683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008361"},{"annotations":[93869,110453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that modulates the size of an anatomical structure.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00409":null,"SJAG_00521":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03401":null,"SJAG_04100":null,"SJAG_04332":null,"SJAG_04479":null,"SJAG_04668":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anatomical structure size","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090066","terms_by_termid":{"GO:0006884":null,"GO:0008361":null,"GO:0009992":null,"GO:0030833":null,"GO:0042989":null,"GO:0045793":null,"GO:0051016":null}}


id: PBO:0085022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinic acid mononucleotide adenylyltransferase; catalyzes the transfer of the adenylyl moiety of ATP to nicotinamide mononucleotide to form NAD; involved in pathways of NAD biosynthesis, including the de novo, NAD(+) salvage, and nicotinamide riboside salvage pathways; homolog of human NMNAT; NMA1 has a paralog, NMA2, that arose from the whole genome duplication","termid":"PBO:0085022"}


id: PR:O74850
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diacylglycerol O-acyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.15","secondary_identifiers":["UniProtKB:O74850"],"synonyms":[{"name":"SPCC1235.15","type":"related"},{"name":"Spom972h-DGAT2","type":"exact"},{"name":"diglyceride acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74850"}


id: GO:1903929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a primary palate over time, from its formation to the mature structure.","definition_xrefs":["GOC:mgi_curators","GOC:TermGenie","PMID:25504820","PMID:24644145","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roof of mouth development","termid":"GO:0060021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary palate development","synonyms":[{"name":"palatum primarium development","type":"related"},{"name":"primary palate process development","type":"exact"},{"name":"primitive palate development","type":"related"},{"name":"processus palatinus medianus development","type":"related"}],"termid":"GO:1903929"}


id: GO:0021880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["PMID:16226447","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"gene_count":0,"genotype_count":0,"name":"obsolete Notch signaling pathway involved in forebrain neuron fate commitment (obsolete GO:0021880)","synonyms":[{"name":"Notch signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0021880"}


id: PBO:0063225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 10","termid":"PBO:0063225"}


id: PBO:0058913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12131","termid":"PBO:0058913"}


id: PBO:0029973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_gamma_radiation","termid":"PBO:0029973"}


id: GO:2001200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte differentiation","termid":"GO:1902107"},{"relation_name":"is_a","term_name":"regulation of dendritic cell differentiation","termid":"GO:2001198"},{"relation_name":"positively_regulates","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell differentiation","termid":"GO:2001200"}


id: FYPO:0001621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-arginine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular arginine level","synonyms":[{"name":"decreased cellular L-arginine level","type":"exact"},{"name":"decreased cellular arginine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular arginine level during vegetative growth","type":"exact"},{"name":"decreased level of arginine in cell","type":"exact"},{"name":"reduced cellular arginine level","type":"exact"},{"name":"reduced level of arginine in cell","type":"exact"}],"termid":"FYPO:0001621"}


id: PBO:0113352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear retention of unspliced pre-mRNAs; required along with Mlp1p and Pml1p; anchored to the nuclear pore complex through an interaction between its bimodular nuclear basket-interaction domain (NuBaID) and Mlp1p and Mlp2p; localizes to the nuclear basket enables linkage between subpopulations of Mlp1p; associates with the subset of nuclear pores farthest from the nucleolus; homologous to human ZC3HC1, a NuBaID containing protein","termid":"PBO:0113352"}


id: GO:0031729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR4 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"CCR4 chemokine receptor binding","synonyms":[{"name":"CCR4 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031729"}


id: FYPO:0001929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to hydroxyurea is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to hydroxyurea","termid":"FYPO:0001926"},{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to hydroxyurea","synonyms":[{"name":"normal cell cycle arrest in response to HU","type":"narrow"},{"name":"normal cell cycle delay following hydroxyurea exposure","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to HU","type":"exact"},{"name":"normal cell cycle regulation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to hydroxyurea","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0001929"}


id: PBO:0086690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by cell wall perturbation","termid":"PBO:0086690"}


id: PBO:0004132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopolin-like complex subunit Mde4","termid":"PBO:0004132"}


id: GO:0047853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + bis-D-fructose 2',1:2,1'-dianhydride = inulobiose.","definition_xrefs":["MetaCyc:DIFRUCTOSE-ANHYDRIDE-SYNTHASE-RXN","RHEA:15041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"difructose-anhydride synthase activity","secondary_identifiers":["EC:4.2.1.179"],"synonyms":[{"name":"bis-D-fructose 2',1:2,1'-dianhydride fructohydrolase activity","type":"related"},{"name":"inulobiose hydrolase activity","type":"related"}],"termid":"GO:0047853"}


id: GO:0010799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-threonine phosphorylation","termid":"GO:0010799"}


id: _global:edited_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edited_to","termid":"_global:edited_to"}


id: PBO:0069362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 622, pseudogene","termid":"PBO:0069362"}


id: FYPO:0004676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of purine-specific mismatch base pair DNA N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal purine-specific mismatch base pair DNA N-glycosylase activity","termid":"FYPO:0004676"}


id: PBO:0053849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1118","termid":"PBO:0053849"}


id: GO:0072345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when nicotinic acid adenine dinucleotide phosphate (NAADP) has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:19387438","PMID:19557428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"NAADP-sensitive calcium-release channel activity","secondary_identifiers":["Reactome:R-HSA-2685505"],"termid":"GO:0072345"}


id: GO:1901756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving butirosin.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butirosin metabolic process","synonyms":[{"name":"butirosin metabolism","type":"exact"}],"termid":"GO:1901756"}


id: GO:0015408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Fe3+(out) = ADP + phosphate + Fe3+(in).","definition_xrefs":["RHEA:12332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type ferric iron transporter activity","secondary_identifiers":["MetaCyc:3.6.3.30-RXN","EC:7.2.2.7"],"synonyms":[{"name":"ABC-type Fe3+ transporter","type":"exact"},{"name":"ATPase-coupled ferric iron transmembrane transporter activity","type":"related"},{"name":"Fe3+-transporting ATPase activity","type":"related"},{"name":"ferric ABC transporter","type":"exact"},{"name":"ferric transporting ATPase activity","type":"related"},{"name":"ferric-transporting ATPase activity","type":"related"}],"termid":"GO:0015408"}


id: GO:0097091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in grouping synaptic vesicles in presynaptic structures.","definition_xrefs":["GOC:ans","PMID:19900895","PMID:7568108","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle localization","termid":"GO:0097479"},{"relation_name":"part_of","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"synaptic vesicle clustering","termid":"GO:0097091"}


id: PR:Q10990
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdt2 gene.","definition_xrefs":["UniProtKB:Q10990","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle protein cdt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.19c","synonyms":[{"name":"Spom972h-cdt2","type":"exact"}],"termid":"PR:Q10990"}


id: GO:0045602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of endothelial cell differentiation","termid":"GO:0045601"},{"relation_name":"negatively_regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell differentiation","synonyms":[{"name":"down regulation of endothelial cell differentiation","type":"exact"},{"name":"down-regulation of endothelial cell differentiation","type":"exact"},{"name":"downregulation of endothelial cell differentiation","type":"exact"},{"name":"inhibition of endothelial cell differentiation","type":"narrow"}],"termid":"GO:0045602"}


id: PBO:0077101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8B pseudogene 2","termid":"PBO:0077101"}


id: GO:0045938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the duration or quality of sleep, a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of circadian rhythm","termid":"GO:0042753"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"positively_regulates","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circadian sleep/wake cycle, sleep","synonyms":[{"name":"activation of circadian sleep/wake cycle, sleep","type":"narrow"},{"name":"positive regulation of sleep","type":"exact"},{"name":"stimulation of circadian sleep/wake cycle, sleep","type":"narrow"},{"name":"up regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"up-regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"upregulation of circadian sleep/wake cycle, sleep","type":"exact"}],"termid":"GO:0045938"}


id: PBO:0027360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_1,3-beta-D-glucan_synthase_activity_during_vegetative_growth","termid":"PBO:0027360"}


id: PBO:0069506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 774, pseudogene","termid":"PBO:0069506"}


id: PBO:0071584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a like","termid":"PBO:0071584"}


id: GO:0042162
data:
  {"annotated_genes":["SJAG_01777","SJAG_05979","SJAG_01698","SJAG_01378","SJAG_04863","SJAG_05372","SJAG_04245","SJAG_02194","SJAG_04372","SJAG_02362","SJAG_02212","SJAG_03092","SJAG_00939","SJAG_03855","SJAG_05214","SJAG_01677","SJAG_00112"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85928,93709,95857,101224,104067,107081,107688,110422,111650],"is_not":false,"summary":null,"term":"GO:0042162"},{"annotations":[85926,102261,85336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003691"},{"annotations":[91232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[85338,91233,107686,92209,106500,110738,104250,107661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to a telomere, a specific structure at the end of a linear chromosome required for the integrity and maintenance of the end.","definition_xrefs":["SO:0000624","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific DNA binding","termid":"GO:0043565"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01777":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02362":null,"SJAG_03092":null,"SJAG_03855":null,"SJAG_04245":null,"SJAG_04372":null,"SJAG_04863":null,"SJAG_05214":null,"SJAG_05372":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"telomeric DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"telomere binding","type":"exact"},{"name":"telomeric repeat binding","type":"exact"}],"termid":"GO:0042162","terms_by_termid":{"GO:0003691":null,"GO:0042162":null,"GO:0043047":null,"GO:0098505":null}}


id: PR:O60181
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3,4-dihydroxy-2-butanone 4-phosphate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03883","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,4-dihydroxy-2-butanone 4-phosphate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.06c","secondary_identifiers":["UniProtKB:O60181"],"synonyms":[{"name":"DHBP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ribB","type":"exact"}],"termid":"PR:O60181"}


id: PBO:0002783
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively regulates sexual differentiation in nutrient rich conditions by repression of Ste11","termid":"PBO:0002783"}


id: PBO:0031127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_proline_nitrogen_source","termid":"PBO:0031127"}


id: GO:0035458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-beta stimulus. Interferon-beta is a type I interferon.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interferon-beta","termid":"GO:0035456"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interferon-beta","synonyms":[{"name":"cellular response to beta-1 interferon","type":"related"},{"name":"cellular response to fiblaferon","type":"exact"},{"name":"cellular response to fibroblast interferon","type":"exact"}],"termid":"GO:0035458"}


id: PBO:0084630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase; catalyzes the transfer of a methyl group from S-adenosylmethionine to the GpppN terminus of capped mRNA; nuclear protein that relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084630"}


id: GO:0015883
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035350"},{"annotations":[103691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"}]},"cv_name":"biological_process","definition":"The directed movement of flavin-adenine dinucleotide (FAD) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. FAD forms the coenzyme of the prosthetic group of various flavoprotein oxidoreductase enzymes, in which it functions as an electron acceptor by being reversibly converted to its reduced form.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"FAD transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"flavin adenine dinucleotide transport","type":"exact"},{"name":"flavin-adenine dinucleotide transport","type":"exact"}],"termid":"GO:0015883","terms_by_termid":{"GO:0035350":null,"GO:1990548":null}}


id: PBO:0052669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 37","termid":"PBO:0052669"}


id: GO:0015340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (Zn2+ or Cd2+)(out) = (Zn2+ or Cd2+)(in). The activity is driven by proton motive force, possibly by proton symport.","definition_xrefs":["TC:2.A.4.2.2"],"gene_count":0,"genotype_count":0,"name":"obsolete zinc, cadmium uptake permease activity (obsolete GO:0015340)","synonyms":[{"name":"zinc, cadmium uptake permease activity","type":"exact"}],"termid":"GO:0015340"}


id: PBO:0036260
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADEnine requiring","termid":"PBO:0036260"}


id: GO:0034739
data:
  {"annotated_genes":["SJAG_00581","SJAG_03627","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93368,100333,105604],"is_not":false,"summary":null,"term":"GO:0034739"},{"annotations":[100336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.","definition_xrefs":["PMID:28450737","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K deacetylase activity","termid":"GO:0141051"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_03627":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0033558","GO:0019213","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H4K16 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H4-K16 deacetylase activity","type":"exact"},{"name":"histone deacetylase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0034739","terms_by_termid":{"GO:0034739":null,"GO:0046970":null}}


id: PBO:0089362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase","termid":"PBO:0089362"}


id: GO:0015774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of polysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transport","termid":"GO:0008643"},{"relation_name":"part_of","term_name":"polysaccharide localization","termid":"GO:0033037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"polysaccharide transport","termid":"GO:0015774"}


id: PBO:0079505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 3","termid":"PBO:0079505"}


id: PBO:0063871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C","termid":"PBO:0063871"}


id: GO:0008740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnose = L-rhamnulose.","definition_xrefs":["RHEA:23160","EC:5.3.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"L-rhamnose isomerase activity","secondary_identifiers":["MetaCyc:RHAMNISOM-RXN","KEGG_REACTION:R02437"],"synonyms":[{"name":"L-rhamnose aldose-ketose-isomerase activity","type":"related"},{"name":"L-rhamnose ketol-isomerase activity","type":"related"},{"name":"rhamnose isomerase activity","type":"related"}],"termid":"GO:0008740"}


id: PBO:0110469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 184","termid":"PBO:0110469"}


id: _global:has_severity
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and its observed severity in a cell. Can also be used to capture expressivity, i.e. the extent to which a phenotype is expressed in an individual.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_severity","synonyms":[{"name":"has_expressivity","type":"exact"}],"termid":"_global:has_severity"}


id: PBO:0076355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 2","termid":"PBO:0076355"}


id: PBO:0039230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT3 intronic transcript 1","termid":"PBO:0039230"}


id: PBO:0028691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_organization","termid":"PBO:0028691"}


id: PBO:0027880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_monomethylation","termid":"PBO:0027880"}


id: GO:1902809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle fiber differentiation.","definition_xrefs":["GOC:mr","GO_REF:0000058","GOC:TermGenie","PMID:17879321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell differentiation","termid":"GO:2001014"},{"relation_name":"regulates","term_name":"skeletal muscle fiber differentiation","termid":"GO:0098528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle fiber differentiation","termid":"GO:1902809"}


id: GO:0046713
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"},{"annotations":[57095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035445"}]},"cv_name":"biological_process","definition":"The directed movement of borate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Borate is the anion (BO3)3-; boron is a group 13 element, with properties which are borderline between metals and non-metals.","definition_xrefs":["PMID:21710975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"borate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"boron transport","type":"related"}],"termid":"GO:0046713","terms_by_termid":{"GO:0035445":null,"GO:0140159":null}}


id: PBO:0049653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 7","termid":"PBO:0049653"}


id: GO:1990781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus given while being held immobile.","definition_xrefs":["PMID:17008368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to immobilization stress","termid":"GO:0035902"},{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to immobilization stress combined with electrical stimulus","termid":"GO:1990781"}


id: PBO:0065660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRJ antisense RNA 1","termid":"PBO:0065660"}


id: PBO:0064706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 42","termid":"PBO:0064706"}


id: GO:0075225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium germination","termid":"GO:0075223"},{"relation_name":"is_a","term_name":"negative regulation of sporangium development","termid":"GO:0075312"},{"relation_name":"negatively_regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangium germination","synonyms":[{"name":"negative regulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075225"}


id: PBO:0040643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated X, apoptosis regulator","termid":"PBO:0040643"}


id: FYPO:0009086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of lithium chloride and sodium dodecyl sulfate. Cells stop growing (and may die) at concentrations of lithium chloride and sodium dodecyl sulfate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to lithium chloride and sodium dodecyl sulfate","synonyms":[{"name":"hypersensitive to lithium chloride and SDS","type":"exact"},{"name":"hypersensitive to lithium chloride and sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to lithium chloride and SDS","type":"exact"},{"name":"sensitive to lithium chloride and SDS during vegetative growth","type":"exact"},{"name":"sensitive to lithium chloride and SDS in combination","type":"exact"},{"name":"sensitive to lithium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to lithium chloride and sodium dodecyl sulfate in combination","type":"exact"}],"termid":"FYPO:0009086"}


id: GO:0033217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of iron ions.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to iron ion starvation (obsolete GO:0033217)","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter in response to iron deficiency","type":"exact"}],"termid":"GO:0033217"}


id: PBO:0057352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548a-1","termid":"PBO:0057352"}


id: GO:0036020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endolysosome. An endolysosome is a transient hybrid organelle formed by fusion of a late endosome with a lysosome.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"endolysosome","termid":"GO:0036019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575","GO:0005773","GO:0005768"],"is_obsolete":false,"name":"endolysosome membrane","synonyms":[{"name":"endolysosomal membrane","type":"exact"}],"termid":"GO:0036020"}


id: GO:0034497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the phagophore assembly site (PAS).","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0051179","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein localization to phagophore assembly site","synonyms":[{"name":"protein localisation to phagophore assembly site","type":"exact"},{"name":"protein localization to PAS","type":"exact"},{"name":"protein localization to pre-autophagosomal structure","type":"narrow"}],"termid":"GO:0034497"}


id: GO:0061141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lung ciliated cell. A lung ciliated cell is a specialized lung epithelial cell that contains cilia for moving substances released from lung secretory cells.","definition_xrefs":["GOC:cilia","GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelial cell differentiation","termid":"GO:0060487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung ciliated cell differentiation","termid":"GO:0061141"}


id: FYPO:0001559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methionine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal methionine import","synonyms":[{"name":"normal L-methionine import","type":"exact"},{"name":"normal L-methionine import across plasma membrane","type":"exact"},{"name":"normal methionine import during mitotic cell cycle","type":"related"},{"name":"normal methionine import during vegetative growth","type":"exact"},{"name":"normal methionine import into cell","type":"exact"},{"name":"normal methionine uptake","type":"exact"}],"termid":"FYPO:0001559"}


id: PBO:0034199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intracellular_endoparasite_of","termid":"PBO:0034199"}


id: PATO:0001599
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's being relocated around an axis.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rotated","synonyms":[{"name":"rotation","type":"exact"}],"termid":"PATO:0001599"}


id: GO:0031549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling via the brain-derived neurotrophic factor receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031548"},{"relation_name":"negatively_regulates","term_name":"brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of brain-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"down regulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"downregulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"inhibition of brain-derived neurotrophic factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of BDNF receptor signaling pathway","type":"exact"},{"name":"negative regulation of BDNF receptor signalling pathway","type":"exact"},{"name":"negative regulation of brain-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0031549"}


id: GO:0022810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the active transport of a solute across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uniporter activity","termid":"GO:0015292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"membrane potential driven uniporter activity","synonyms":[{"name":"porter","type":"broad"}],"termid":"GO:0022810"}


id: PBO:0048342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 53","termid":"PBO:0048342"}


id: GO:0015176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall of bacteria, where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded, these enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some catalyze export of nucleases.","definition_xrefs":["TC:1.A.38.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete holin (obsolete GO:0015176)","synonyms":[{"name":"holin","type":"exact"}],"termid":"GO:0015176"}


id: PBO:0052905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-2","termid":"PBO:0052905"}


id: PBO:0013123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, localizing to double strand breaks Dbl1","termid":"PBO:0013123"}


id: PBO:0001487
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telomere-associated in Yarrowia lipolytica","termid":"PBO:0001487"}


id: GO:0071293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tellurium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tellurium ion","termid":"GO:0046690"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tellurium ion","synonyms":[{"name":"cellular response to tellurium","type":"exact"}],"termid":"GO:0071293"}


id: PBO:0079915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein like","termid":"PBO:0079915"}


id: PBO:0075733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 1","termid":"PBO:0075733"}


id: PR:Q9P7P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hop1 gene.","definition_xrefs":["UniProtKB:Q9P7P2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific protein hop1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.02","synonyms":[{"name":"Spom972h-hop1","type":"exact"},{"name":"linear element-associated protein hop1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7P2"}


id: PBO:0084918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Molecular chaperone involved in protein folding in ER; mutation causes defects in cell wall synthesis and lysis of autophagic bodies, suppresses tor2 mutations, and is synthetically lethal with kar2-1 and with rot2 mutations; involved in N-linked glycosylation and O-mannosylation; transmembrane helix Ser250 is essential for Rot1p to interact with other membrane components and exert its functional role, avoiding exposure of Ser H-bonding group at lipid-exposed surface","termid":"PBO:0084918"}


id: GO:0097504
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Nuclear bodies frequently found near or associated with Cajal bodies (also called coiled bodies or CBs). Gemini of coiled bodies, or 'gems', are similar in size and shape to CBs, and often indistinguishable under the microscope. Unlike CBs, gems do not contain small nuclear ribonucleoproteins (snRNPs); they contain a protein called survivor of motor neurons (SMN) whose function relates to snRNP biogenesis. Gems are believed to assist CBs in snRNP biogenesis, and to play a role in the etiology of spinal muscular atrophy (SMA).","definition_xrefs":["GOC:pr","PMID:9683623","PMID:11031238","Wikipedia:Cell_nucleus#Cajal_bodies_and_gems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"Gemini of coiled bodies","synonyms":[{"name":"Gems","type":"exact"}],"termid":"GO:0097504"}


id: PBO:0078139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 18","termid":"PBO:0078139"}


id: GO:0044051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released via cytolysis of symbiont cells. Cytolysis is the rupture of cell membranes and the loss of cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released by symbiont cytolysis (obsolete GO:0044051)","synonyms":[{"name":"interaction with host via substance released by cytolysis of symbiont","type":"exact"}],"termid":"GO:0044051"}


id: PBO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycerol dehydrogenase Gld1","termid":"PBO:0001392"}


id: PBO:0040631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated RING domain 1","termid":"PBO:0040631"}


id: GO:1900354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methanofuran metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of methanofuran metabolic process","synonyms":[{"name":"regulation of methanofuran metabolism","type":"exact"}],"termid":"GO:1900354"}


id: PBO:0051578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor B","termid":"PBO:0051578"}


id: PBO:0056405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 3","termid":"PBO:0056405"}


id: PBO:0087556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of SEACAT, a subcomplex of the SEA complex; Mtc1p, along with Rtc1p and Sea4p, redundantly inhibit the TORC1 inhibitory role of the Iml1p/SEACIT (Iml1p-Npr2p-Npr3p) subcomplex, a GAP for GTPase Gtr1p (EGOC subunit) in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; relative distribution to the vacuolar membrane decreases upon DNA replication stress","termid":"PBO:0087556"}


id: PBO:0064118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 5","termid":"PBO:0064118"}


id: GO:0051504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A branched pathway that produces the precursors to four structurally distinct types of polycyclic diterpenes. The pathway starts with the cyclization of geranylgeranyl diphosphate into ent-copalyl diphosphate and syn-copalyl diphosphate. The catalytic conversion by diterpene cyclases of these two compounds produces the four diterpene hydrocarbons which are precursors to the four structurally distinct classes of diterpene phytoalexins.","definition_xrefs":["MetaCyc:PWY-2981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"part_of","term_name":"diterpene phytoalexin biosynthetic process","termid":"GO:0051502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"diterpene phytoalexin precursor biosynthetic process pathway","synonyms":[{"name":"diterpene phytoalexin precursor anabolism pathway","type":"exact"},{"name":"diterpene phytoalexin precursor formation pathway","type":"exact"},{"name":"diterpene phytoalexin precursor synthesis pathway","type":"exact"}],"termid":"GO:0051504"}


id: PBO:0027086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_midzone_during_anaphase","termid":"PBO:0027086"}


id: GO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C3d product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"complement component C3d receptor activity","termid":"GO:0001860"}


id: GO:0015468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Plasmid-encoded bacteriocins which are produced by enteric bacteria. Exert a lethal effect on other bacteria including E. coli strains that lack the Col plasmid. Bind to a cell surface receptor and are transported into the periplasm via an energy-dependent process involving a TonB- or TolA-dependent hetero-oligomeric protein complex. Some colicins kill their target cell by inserting into the cytoplasmic membrane where they form voltage-sensitive (trans-negative) channels that depolarize and deenergize the cell, and thereby kill it.","definition_xrefs":["TC:1.C.1.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete colicin (obsolete GO:0015468)","synonyms":[{"name":"colicin","type":"exact"}],"termid":"GO:0015468"}


id: PBO:0079775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UGDH antisense RNA 1","termid":"PBO:0079775"}


id: PBO:0005041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 interacting factor 1","termid":"PBO:0005041"}


id: PBO:0082034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory particle lid subcomplex component; role in Ub-dependent proteolysis and proteasome stability; involved in TREX-2 mediated mRNA export, and in the prevention of transcription-associated genome instability; ubiquitinated by Nedd4-like E3-ligase, Rsp5p; human ortholog DSS1, a BRCA1 binding protein implicated in cancer, complements the yeast null; drives trinucleotide repeat expansion; protein abundance increases in response to DNA replication stress","termid":"PBO:0082034"}


id: GO:0039683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A rolling circle viral DNA replication that begins with a double-stranded viral DNA genome.","definition_xrefs":["GOC:bf","GOC:jl","VZ:2676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rolling circle viral DNA replication","termid":"GO:0039682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"rolling circle double-stranded viral DNA replication","synonyms":[{"name":"dsDNA rolling circle replication","type":"exact"}],"termid":"GO:0039683"}


id: PBO:0091051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane calcium ion import channel Cch1","termid":"PBO:0091051"}


id: GO:0097394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of telomeric repeat-containing RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II promoter.","definition_xrefs":["PMID:22139915","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete telomeric repeat-containing RNA transcription by RNA polymerase II (obsolete GO:0097394)","synonyms":[{"name":"TERRA RNA transcription from RNA pol II promoter","type":"related"},{"name":"telomeric RNA transcription from Pol II promoter","type":"related"},{"name":"telomeric repeat-containing RNA transcription from RNA pol II promoter","type":"exact"}],"termid":"GO:0097394"}


id: SO:0001648
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon that is disrupted by the insertion of another element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_transposon","synonyms":[{"name":"nested transposon","type":"exact"}],"termid":"SO:0001648"}


id: GO:1901481
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99972],"is_not":false,"summary":null,"term":"GO:1901481"}]},"cv_name":"biological_process","definition":"Any L-glutamate import that is involved in cellular response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate import","termid":"GO:0051938"},{"relation_name":"part_of","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"L-glutamate import involved in cellular response to nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-glutamate uptake involved in cellular response to nitrogen starvation","type":"exact"}],"termid":"GO:1901481","terms_by_termid":{"GO:1901481":null}}


id: GO:0034524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyisophthalic acid = salicylate + CO2.","definition_xrefs":["UM-BBD_reactionID:r0776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyisophthalate decarboxylase activity","termid":"GO:0034524"}


id: PBO:0002487
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.101","termid":"PBO:0002487"}


id: PBO:0068582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 33, pseudogene","termid":"PBO:0068582"}


id: MOD:01315
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(2)H-labeled N6-succinyl-L-lysine.","definition_xrefs":["PubMed:11857757","PubMed:15189151","PubMed:11344537","Unimod:65#K","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"4x(2)H labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4H2), N-term & K","type":"related"},{"name":"Succinyl:2H(4)","type":"related"}],"termid":"MOD:01315"}


id: MOD:01931
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-phospho-L-lysine.","definition_xrefs":["PubMed:20144148","RESID:AA0585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"N-phosphorylated residue","termid":"MOD:01456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"N6-phospho-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(phosphonoamino)hexanoic acid","type":"exact"},{"name":"(2S)-2-azanyl-6-(phosphonoamino)hexanoic acid","type":"exact"},{"name":"6-phospholysine","type":"exact"},{"name":"N(6)-phosphonolysine","type":"exact"},{"name":"N(epsilon)-phospholysine","type":"exact"},{"name":"N(epsilon)-phosphonolysine","type":"exact"},{"name":"N(epsilon)-phosphonyllysine","type":"exact"},{"name":"N(epsilon)-phosphoryllysine","type":"exact"},{"name":"N6-phospho-L-lysine","type":"exact"}],"termid":"MOD:01931"}


id: GO:0004216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Has a broad proteolytic activity. With small-molecule substrates and inhibitors, the major determinant of specificity is P2, which is preferably Leu, Met > Phe, and not Arg.","definition_xrefs":["EC:3.4.22.38"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin K activity (obsolete GO:0004216)","synonyms":[{"name":"cathepsin K activity","type":"exact"},{"name":"cathepsin O activity","type":"related"},{"name":"cathepsin O2 activity","type":"related"},{"name":"cathepsin X activity","type":"related"}],"termid":"GO:0004216"}


id: PBO:0052255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDEL endoplasmic reticulum protein retention receptor 2","termid":"PBO:0052255"}


id: GO:0046595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the directed movement of mRNA to the oocyte pole plasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of RNA localization","termid":"GO:0051236"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0051179"],"is_obsolete":false,"name":"establishment of pole plasm mRNA localization","secondary_identifiers":["GO:0048121"],"synonyms":[{"name":"establishment of oocyte pole plasm mRNA localization","type":"exact"},{"name":"establishment of pole plasm mRNA localisation","type":"exact"}],"termid":"GO:0046595"}


id: GO:0102693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + kinetin = H+ + kinetin-7-N-glucoside + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"UDP-glucose:kinetin 7-N-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4731"],"termid":"GO:0102693"}


id: GO:0000221
data:
  {"annotated_genes":["SJAG_01471","SJAG_01817","SJAG_00212","SJAG_00136","SJAG_04015","SJAG_01447","SJAG_01397","SJAG_04955"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84207,92752,95047,96145,97769,98802,106001,114827],"is_not":false,"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"The V1 domain of a proton-transporting V-type ATPase found in the vacuolar membrane.","definition_xrefs":["GOC:mah","PMID:16449553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase, V1 domain","termid":"GO:0033180"},{"relation_name":"part_of","term_name":"vacuolar proton-transporting V-type ATPase complex","termid":"GO:0016471"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase, V1 domain","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar hydrogen ion-transporting ATPase V1 domain","type":"exact"}],"termid":"GO:0000221","terms_by_termid":{"GO:0000221":null}}


id: PBO:0041658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 3","termid":"PBO:0041658"}


id: PBO:0080798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 4","termid":"PBO:0080798"}


id: SO:0001173
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of seven nucleotide bases in tRNA which contains the anticodon. It has the sequence 5'-pyrimidine-purine-anticodon-modified purine-any base-3.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anticodon_loop","synonyms":[{"name":"anti-codon loop","type":"exact"},{"name":"anticodon loop","type":"exact"}],"termid":"SO:0001173"}


id: PBO:0111332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L7-like protein involved in ribosome biogenesis","termid":"PBO:0111332"}


id: PBO:0068386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF186 antisense RNA 1","termid":"PBO:0068386"}


id: PBO:0054678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2086","termid":"PBO:0054678"}


id: GO:0019086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transcription of the final group of viral genes of the viral life cycle, following middle transcription, or where middle transcription doesn't occur, following early transcription. Involves the transcription of genes encoding structural proteins.","definition_xrefs":["GOC:jh2","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"late viral transcription","synonyms":[{"name":"late viral mRNA transcription","type":"related"}],"termid":"GO:0019086"}


id: PBO:0089055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Adn2","termid":"PBO:0089055"}


id: GO:0033780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taurochenodeoxycholate + O2 + reduced [NADPH--hemoprotein reductase] +  = taurohyocholate H+ + H2O + oxidized [NADPH--hemoprotein reductase]. Acts on taurochenodeoxycholate, taurodeoxycholate and less readily on lithocholate and chenodeoxycholate.","definition_xrefs":["EC:1.14.14.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"taurochenodeoxycholate 6alpha-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-7977"],"synonyms":[{"name":"CYP3A4","type":"related"},{"name":"CYP4A21","type":"related"},{"name":"taurochenodeoxycholate 6alpha-monooxygenase activity","type":"related"},{"name":"taurochenodeoxycholate,NADPH:oxygen oxidoreductase (6alpha-hydroxylating) activity","type":"related"}],"termid":"GO:0033780"}


id: PBO:0077479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200B","termid":"PBO:0077479"}


id: PBO:0044103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A11","termid":"PBO:0044103"}


id: GO:0045828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving isoprenoid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"positively_regulates","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of isoprenoid metabolic process","synonyms":[{"name":"activation of isoprenoid metabolic process","type":"narrow"},{"name":"positive regulation of isoprenoid metabolism","type":"exact"},{"name":"stimulation of isoprenoid metabolic process","type":"narrow"},{"name":"up regulation of isoprenoid metabolic process","type":"exact"},{"name":"up-regulation of isoprenoid metabolic process","type":"exact"},{"name":"upregulation of isoprenoid metabolic process","type":"exact"}],"termid":"GO:0045828"}


id: PBO:0068040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 345","termid":"PBO:0068040"}


id: PR:Q9UUC2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- crs103 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUC2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C365.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.01","synonyms":[{"name":"Spom972h-crs103","type":"exact"}],"termid":"PR:Q9UUC2"}


id: GO:0030023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A component of the extracellular matrix that enables the matrix to recoil after transient stretching.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"},{"relation_name":"is_a","term_name":"structural molecule activity conferring elasticity","termid":"GO:0097493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"extracellular matrix constituent conferring elasticity","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"},{"name":"elastin","type":"related"}],"termid":"GO:0030023"}


id: PBO:0067987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 289","termid":"PBO:0067987"}


id: GO:0090542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ELYC protein domain. The ELYC domain is an approximately 150 amino acid sequence which contains a highly conserved tetrapeptide sequence, ELYC.","definition_xrefs":["PMID:18032582","PMID:19525971","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"ELYC domain binding","termid":"GO:0090542"}


id: GO:0018595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-pinene + O2 + 2 H+ + 2 e- = H2O + pinocarveol.","definition_xrefs":["UM-BBD_reactionID:r0716"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-pinene monooxygenase activity (obsolete GO:0018595)","termid":"GO:0018595"}


id: PBO:0089106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tryptophan-tRNA ligase Wrs1","termid":"PBO:0089106"}


id: GO:0033250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a penicillin + H2O = a substituted beta-amino acid derivative of the penicillin.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactamase activity","termid":"GO:0008800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"penicillinase activity","secondary_identifiers":["MetaCyc:BETA-LACTAMASE-RXN"],"termid":"GO:0033250"}


id: PBO:0040597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG1 pseudogene 1","termid":"PBO:0040597"}


id: PBO:0061165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Leu (TAA) 3-1","termid":"PBO:0061165"}


id: PBO:0087494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of DUBm module of SAGA and SLIK; has roles in anchoring deubiquitination module (DUBm) into SAGA and SLIK complexes, maintaining organization and ubiquitin-binding conformation of Ubp8p, thereby contributing to overall DUBm activity; involved in preinitiation complex assembly at promoters; relocalizes to cytosol under hypoxia; human homolog ATXN7 implicated in spinocerebellar ataxia, and can complement yeast null mutant","termid":"PBO:0087494"}


id: PBO:0031108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_DNA_damage","termid":"PBO:0031108"}


id: GO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["GOC:add","PMID:12905029","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of erythrocyte clearance","termid":"GO:0034106"},{"relation_name":"negatively_regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte clearance","synonyms":[{"name":"negative regulation of RBC clearance","type":"exact"},{"name":"negative regulation of neocytolysis","type":"narrow"},{"name":"negative regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034107"}


id: PBO:0082068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methylbutanal reductase and NADPH-dependent methylglyoxal reductase; stress induced (osmotic, ionic, oxidative, heat shock and heavy metals); regulated by the HOG pathway; restores resistance to glycolaldehyde by coupling reduction of glycolaldehyde to ethylene glycol and oxidation of NADPH to NADP+; protein abundance increases in response to DNA replication stress; methylglyoxal reductase (NADPH-dependent) is also known as D-lactaldehyde dehydrogenase","termid":"PBO:0082068"}


id: FYPO:0004472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is abolished, and the protein is instead present in the nucleolus, during a cellular response to latrunculin B.","definition_xrefs":["PMID:18951025","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B","synonyms":[{"name":"abolished protein localisation to cytoplasm with protein mislocalised to nucleolus during cellular response to latrunculin B","type":"exact"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to LatB","type":"exact"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B during vegetative growth","type":"exact"},{"name":"protein localization to cytoplasm abolished with protein mislocalized to nucleolus during cellular response to latrunculin B","type":"exact"}],"termid":"FYPO:0004472"}


id: PBO:0052134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNH1 intronic transcript 1","termid":"PBO:0052134"}


id: PR:Q09776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snu23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6.U5 small nuclear ribonucleoprotein component snu23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.11c","synonyms":[{"name":"Spom972h-snu23","type":"exact"}],"termid":"PR:Q09776"}


id: FYPO:0002371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of spores, undivided germinated spores, and germinated spores that go on to divide once or twice. Some germinated spores remain septated and do not complete cell division.","definition_xrefs":["PomBase:jh","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, undivided germinated spores and divided germinated spores (obsolete FYPO:0002371)","synonyms":[{"name":"inviable mixed population including spores and undivided and divided germinated spores","type":"exact"}],"termid":"FYPO:0002371"}


id: FYPO:0003796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from an RNA polymerase II promoter does not occur. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PMID:16874521","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription during vegetative growth","termid":"FYPO:0001443"},{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abolished transcription from RNA polymerase II promoter","synonyms":[{"name":"abolished transcription from RNA polymerase II promoter during mitotic cell cycle","type":"related"},{"name":"abolished transcription from RNA polymerase II promoter during vegetative growth","type":"exact"},{"name":"transcription from RNA polymerase II promoter abolished","type":"exact"}],"termid":"FYPO:0003796"}


id: GO:0014703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within oscillatory skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Oscillatory muscle contraction occurs in insect wing muscles and is characterized by asynchrony between action potential and contraction and by stretch activation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oscillatory muscle contraction","termid":"GO:0014703"}


id: GO:1901558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metformin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to metformin","termid":"GO:1901558"}


id: GO:0051736
data:
  {"annotated_genes":["SJAG_01791"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89600],"is_not":false,"summary":null,"term":"GO:0051736"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5'-dephospho-RNA = ADP + 5'-phospho-RNA.","definition_xrefs":["RHEA:54580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051734"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent RNA kinase activity","type":"exact"},{"name":"ATP-dependent polyribonucleotide kinase activity","type":"exact"},{"name":"polyribonucleotide 5'-hydroxyl-kinase activity","type":"broad"}],"termid":"GO:0051736","terms_by_termid":{"GO:0051736":null}}


id: PBO:0052604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte proline rich protein","termid":"PBO:0052604"}


id: GO:0047580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hydroxy-L-proline = cis-4-hydroxy-D-proline.","definition_xrefs":["EC:5.1.1.8","RHEA:21152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"4-hydroxyproline epimerase activity","secondary_identifiers":["MetaCyc:4-HYDROXYPROLINE-EPIMERASE-RXN","KEGG_REACTION:R03296"],"synonyms":[{"name":"4-hydroxyproline 2-epimerase activity","type":"related"},{"name":"L-hydroxyproline epimerase activity","type":"related"},{"name":"hydroxyproline 2-epimerase activity","type":"related"},{"name":"hydroxyproline epimerase activity","type":"related"}],"termid":"GO:0047580"}


id: PBO:0090033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/mRNA dihydrouridine synthase Dus2","termid":"PBO:0090033"}


id: GO:0005883
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter.","definition_xrefs":["ISBN:0815316194","ISBN:0198506732","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"neurofilament","secondary_identifiers":["Wikipedia:Neurofilament","NIF_Subcellular:sao1316272517"],"synonyms":[{"name":"type IV intermediate filament","type":"exact"}],"termid":"GO:0005883"}


id: PR:O13951
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iwr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II nuclear localization protein iwr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.08","synonyms":[{"name":"Spom972h-iwr1","type":"exact"}],"termid":"PR:O13951"}


id: PBO:0086211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds eIF4G and has a role in repression of translation; has an RGG motif; found in cytoplasmic P bodies; binds to mRNAs under glucose starvation stress, most often in the 5' UTR; found associated with small nucleolar RNAs snR10 and snR11; SBP1 has a paralog, RNP1, that arose from the whole genome duplication","termid":"PBO:0086211"}


id: PBO:0016924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS protein complex associated ATPase Bud32 (predicted)","termid":"PBO:0016924"}


id: GO:0018910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzene, C6H6, a volatile, very inflammable liquid, contained in the naphtha produced by the destructive distillation of coal, from which it is separated by fractional distillation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene metabolic process","synonyms":[{"name":"benzene metabolism","type":"exact"}],"termid":"GO:0018910"}


id: GO:0006744
data:
  {"annotated_genes":["SJAG_00459","SJAG_01668","SJAG_01866","SJAG_04568","SJAG_04642","SJAG_06603","SJAG_01672","SJAG_01043","SJAG_01865","SJAG_00721","SJAG_00933","SJAG_04000","SJAG_01820"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83881,85790,87957,87962,94531,99378,104295,105407,109883,110998,111988,113216,115693,115694],"is_not":false,"summary":null,"term":"GO:0006744"},{"annotations":[85347],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[104296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032194"},{"annotations":[111989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901006"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone metabolic process","termid":"GO:0006743"},{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_04000":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:29191091":null},"secondary_identifiers":["MetaCyc:UBISYN-PWY"],"synonyms":[{"name":"coenzyme Q biosynthesis","type":"exact"},{"name":"coenzyme Q biosynthetic process","type":"exact"},{"name":"coenzyme Q10 biosynthesis","type":"narrow"},{"name":"coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"coenzyme Q6 biosynthesis","type":"narrow"},{"name":"coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"coenzyme Q8 biosynthesis","type":"narrow"},{"name":"coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"coenzyme Q9 biosynthesis","type":"narrow"},{"name":"coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"ubiquinone anabolism","type":"exact"},{"name":"ubiquinone biosynthesis","type":"exact"},{"name":"ubiquinone formation","type":"exact"},{"name":"ubiquinone synthesis","type":"exact"}],"termid":"GO:0006744","terms_by_termid":{"GO:0006744":null,"GO:0032194":null,"GO:1901006":null,"GO:1904775":null}}


id: GO:0021981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of cells in the developing subpallium in which cells move from the ventricular and/or subventricular zone toward the surface of the brain.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell migration","termid":"GO:0021980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium radially oriented migration","termid":"GO:0021981"}


id: GO:2000248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment or maintenance of neuroblast polarity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity","termid":"GO:0032878"},{"relation_name":"is_a","term_name":"negative regulation of asymmetric cell division","termid":"GO:0045769"},{"relation_name":"negatively_regulates","term_name":"establishment or maintenance of neuroblast polarity","termid":"GO:0045196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"negatively_regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"negative regulation of establishment or maintenance of neuroblast polarity","synonyms":[{"name":"negative regulation of establishment and/or maintenance of neuroblast cell polarity","type":"exact"}],"termid":"GO:2000248"}


id: GO:0003913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA.","definition_xrefs":["PMID:11124949","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA photolyase activity","secondary_identifiers":["MetaCyc:DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN"],"termid":"GO:0003913"}


id: GO:0030471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The dynamics of the spindle pole body and microtubule cytoskeleton during the cell cycle. Includes spindle pole body duplication and separation and formation and elongation of the mitotic spindle. As in, but not restricted to, the fungi (Fungi, ncbi_taxonomy_id:4751).","definition_xrefs":["ISBN:0879693649"],"gene_count":0,"genotype_count":0,"name":"obsolete spindle pole body and microtubule cycle (sensu Fungi) (obsolete GO:0030471)","synonyms":[{"name":"spindle pole body and microtubule cycle (sensu Fungi)","type":"exact"},{"name":"spindle pole body and microtubule cycle (sensu Saccharomyces)","type":"narrow"}],"termid":"GO:0030471"}


id: PBO:0081052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 10","termid":"PBO:0081052"}


id: PATO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A life span which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"life span","termid":"PATO:0000050"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased life span","synonyms":[{"name":"high life span","type":"exact"}],"termid":"PATO:0001603"}


id: GO:0033377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is maintained in a secretory granule in a T cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"},{"relation_name":"part_of","term_name":"protein localization to T cell secretory granule","termid":"GO:0033374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in T cell secretory granule","synonyms":[{"name":"maintenance of protein localization in T cell secretory granule","type":"related"},{"name":"maintenance of protein localization in T lymphocyte secretory granule","type":"exact"},{"name":"maintenance of protein localization in T-cell secretory granule","type":"exact"},{"name":"maintenance of protein localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033377"}


id: PBO:0089633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase inhibitor and disassembly protein in response to oxidative stress Oxr1","termid":"PBO:0089633"}


id: GO:0002441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a cell as part of an inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion","termid":"GO:0001821"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"part_of","term_name":"histamine production involved in inflammatory response","termid":"GO:0002349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"histamine secretion involved in inflammatory response","synonyms":[{"name":"histamine secretion involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002441"}


id: PBO:0065806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB2B, member RAS oncogene family","termid":"PBO:0065806"}


id: PBO:0045743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein-Barr virus induced 3","termid":"PBO:0045743"}


id: PBO:0085285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal protein; identification as a delta(3,5)-delta(2,4)-dienoyl-CoA isomerase involved in fatty acid metabolism is disputed; DCI1 has a paralog, ECI1, that arose from the whole genome duplication","termid":"PBO:0085285"}


id: PBO:0003043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase family 3 (predicted)","termid":"PBO:0003043"}


id: PR:O94235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RAF proto-oncogene serine/threonine-protein kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02427","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase mph1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.01","secondary_identifiers":["UniProtKB:O94235"],"synonyms":[{"name":"Spom972h-RAF1","type":"exact"}],"termid":"PR:O94235"}


id: FYPO:0007753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains more than one meiotic spindle during the first meiotic nuclear division.","definition_xrefs":["PomBae:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple meiotic spindles","termid":"FYPO:0006390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0000120"],"is_obsolete":false,"name":"multiple spindles during meiosis I","synonyms":[{"name":"additional spindles present during meiosis I","type":"exact"},{"name":"extra spindles during meiosis I","type":"exact"},{"name":"increased number of spindles during meiosis I","type":"exact"},{"name":"multiple meiotic spindles during first meiotic nuclear division","type":"exact"},{"name":"multiple meiotic spindles during meiosis I","type":"exact"},{"name":"spindles present in greater numbers during meiosis I","type":"exact"}],"termid":"FYPO:0007753"}


id: PBO:0041756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP1 pseudogene 1","termid":"PBO:0041756"}


id: GO:0045023
data:
  {"annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112112,114195,95693],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0070317"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle phase transition whose occurrence commits the cell from the G0 quiescent state to the G1 phase. Under certain conditions, cells exit the cell cycle during G1 and remain in the G0 state as nongrowing, non-dividing (quiescent) cells. Appropriate stimulation of such cells induces them to return to G1 and resume growth and division. The G0 to G1 transition is accompanied by many changes in the program of gene expression.","definition_xrefs":["GOC:mtg_cell_cycle","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"G0 to G1 transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045023","terms_by_termid":{"GO:0070317":null}}


id: PATO:0001291
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality that inheres in an bearer by virtue of how that bearer interacts with electromagnetic radiation.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Electromagnetic_radiation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation quality","termid":"PATO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}


id: GO:0045451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0044085"],"is_obsolete":false,"name":"pole plasm oskar mRNA localization","synonyms":[{"name":"establishment and maintenance of oskar mRNA localization in pole plasm","type":"exact"},{"name":"establishment and maintenance of pole plasm oskar mRNA localization","type":"exact"},{"name":"oocyte pole plasm oskar mRNA localization","type":"exact"},{"name":"pole plasm oskar mRNA localisation","type":"exact"}],"termid":"GO:0045451"}


id: PBO:0086125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for function of the Sit4p protein phosphatase; forms a complex with Sit4p; member of a family of similar proteins including Sap4p, Sap185p, and Sap190p; protein abundance increases in response to DNA replication stress; SAP155 has a paralog, SAP4, that arose from the whole genome duplication","termid":"PBO:0086125"}


id: PBO:0049476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.0 linker histone","termid":"PBO:0049476"}


id: GO:0018952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving parathion, a highly toxic organophosphate compound formerly used as a broad spectrum insecticide, acaricide, fumigant and nematocide. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition.","definition_xrefs":["UM-BBD_pathwayID:pthn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"parathion metabolic process","synonyms":[{"name":"parathion metabolism","type":"exact"}],"termid":"GO:0018952"}


id: PBO:0076910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor A, mitochondrial pseudogene 2","termid":"PBO:0076910"}


id: PBO:0028552
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_mitosis","termid":"PBO:0028552"}


id: PBO:0085408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane pyridoxine (vitamin B6) transporter; member of the purine-cytosine permease subfamily within the major facilitator superfamily; proton symporter with similarity to Fcy21p, Fcy2p, and Fcy22p","termid":"PBO:0085408"}


id: FYPO:0003958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of diacylglycerol O-acyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal diacylglycerol O-acyltransferase activity","synonyms":[{"name":"abnormal DGAT activity","type":"exact"},{"name":"abnormal diacylglycerol acyltransferase activity","type":"broad"}],"termid":"FYPO:0003958"}


id: PBO:0056061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 1","termid":"PBO:0056061"}


id: FYPO:0006617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable, elongated, and has a greater diameter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable vegetative cell with increased cell diameter","termid":"FYPO:0006616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"viable elongated vegetative cell with increased cell diameter","synonyms":[{"name":"viable elongated cell with increased cell diameter during vegetative growth","type":"exact"},{"name":"viable elongated vegetative cell with increased cell diameter during mitotic cell cycle","type":"related"},{"name":"viable elongated vegetative cell with increased cell thickness","type":"exact"},{"name":"viable elongated vegetative cell with increased cell width","type":"exact"}],"termid":"FYPO:0006617"}


id: RO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between c and p if and only if c is capable of some activity a, and a positively regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_regulating","termid":"RO:0002596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_positively_regulating","termid":"RO:0002598"}


id: PBO:0072028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S9 pseudogene 4","termid":"PBO:0072028"}


id: GO:0002647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of central tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of central tolerance induction","termid":"GO:0002646"},{"relation_name":"negatively_regulates","term_name":"central tolerance induction","termid":"GO:0002508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of central tolerance induction","synonyms":[{"name":"down regulation of central tolerance induction","type":"exact"},{"name":"down-regulation of central tolerance induction","type":"exact"},{"name":"downregulation of central tolerance induction","type":"exact"},{"name":"inhibition of central tolerance induction","type":"narrow"}],"termid":"GO:0002647"}


id: PATO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's spatial positioning with respect to an additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"has_part","term_name":"orientation","termid":"PATO:0000133"},{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alignment","termid":"PATO:0001652"}


id: PR:P0CT75
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps23 gene.","definition_xrefs":["UniProtKB:P0CT75","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.02c","synonyms":[{"name":"Spom972h-rps23","type":"exact"}],"termid":"PR:P0CT75"}


id: PBO:0049003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 1 like","termid":"PBO:0049003"}


id: GO:0021957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a pyramidal cell, that carries efferent (outgoing) action potentials from the cell body in cerebral cortex layer V towards target cells in the gray matter of the spinal cord. This axonal process is a member of those that make up the corticospinal tract.","definition_xrefs":["GOC:jid","GO_REF:0000021","PMID:9878731","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal tract morphogenesis","synonyms":[{"name":"CST axonogenesis","type":"exact"},{"name":"corticospinal tract axonogenesis","type":"exact"}],"termid":"GO:0021957"}


id: PBO:0070291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 32","termid":"PBO:0070291"}


id: PBO:0049193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor AMPA type subunit 4","termid":"PBO:0049193"}


id: PBO:0052770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 62","termid":"PBO:0052770"}


id: PR:Q9C1W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mim1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1W7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.08","synonyms":[{"name":"Spom972h-mim1","type":"exact"}],"termid":"PR:Q9C1W7"}


id: GO:1902594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A nuclear import which involves another organism.","definition_xrefs":["GO_REF:0000089","GOC:TermGenie","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism nuclear import (obsolete GO:1902594)","synonyms":[{"name":"multi organism nuclear import","type":"exact"}],"termid":"GO:1902594"}


id: GO:0071749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two, three, or four monomeric IgA immunoglobulin complexes linked through both direct disulfide bonds and through disulfide binded monomers of J chain acting as a bridge. Each IgA monomer consists of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds. Dimeric IgA is sometimes complexed additionally with secretory component, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","PMID:16362985","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgA immunoglobulin complex, circulating","termid":"GO:0071746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"polymeric IgA immunoglobulin complex","synonyms":[{"name":"pIgA antibody","type":"exact"},{"name":"pIgA1 antibody","type":"narrow"},{"name":"polymeric IgA antibody","type":"exact"},{"name":"polymeric IgA1 antibody","type":"narrow"}],"termid":"GO:0071749"}


id: FYECO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A temperature at which a conditional (heat- or cold-sensitive) mutant does not grow.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restrictive temperature","synonyms":[{"name":"non-permissive temperature","type":"exact"},{"name":"nonpermissive temperature","type":"exact"}],"termid":"FYECO:0000229"}


id: GO:0015406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ABC-type uptake permease activity (obsolete GO:0015406)","synonyms":[{"name":"ABC-type uptake permease activity","type":"exact"}],"termid":"GO:0015406"}


id: PATO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000925 absolute enzyme function (obsolete PATO:0000925)","termid":"PATO:0000925"}


id: PBO:0003306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiskott-Aldrich syndrome homolog binding protein Lsb1 (predicted)","termid":"PBO:0003306"}


id: PBO:0055934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 40","termid":"PBO:0055934"}


id: FYPO:0000201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone deacetylation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"},{"relation_name":"is_a","term_name":"abnormal protein deacetylation during vegetative growth","termid":"FYPO:0004485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abnormal histone deacetylation during vegetative growth","synonyms":[{"name":"abnormal histone deacetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000201"}


id: PBO:0055521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2955","termid":"PBO:0055521"}


id: PBO:0043849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 (Knops blood group)","termid":"PBO:0043849"}


id: PBO:0071062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 64","termid":"PBO:0071062"}


id: RO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x lumen_of y iff x is the space or substance that is part of y and does not cross any of the inner membranes or boundaries of y that is maximal with respect to the volume of the convex hull.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumen_of","termid":"RO:0002571"}


id: PBO:0046452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor receptor pathway substrate 8","termid":"PBO:0046452"}


id: PBO:0041977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 18","termid":"PBO:0041977"}


id: PBO:0043162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing DFFA like effector b","termid":"PBO:0043162"}


id: PBO:0071133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 135","termid":"PBO:0071133"}


id: PBO:0051261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-67-3 (pseudogene)","termid":"PBO:0051261"}


id: PBO:0083095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage-dependent checkpoint protein; required for cell-cycle arrest in G1/S, intra-S, and G2/M, plays a role in postreplication repair (PRR) pathway; transmits checkpoint signal by activating Rad53p and Chk1p; protects double-strand breaks from premature resection; multiple cyclin dependent kinase consensus sites and the C-terminal BRCT domain contribute to DNA damage checkpoint activation; Rad9p Chk1 Activating Domain (CAD) is phosphorylated at multiple sites by Cdc28p/Clb2p","termid":"PBO:0083095"}


id: PR:O74537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC74.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C74.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.04","synonyms":[{"name":"Spom972h-SPCC74.04","type":"exact"}],"termid":"PR:O74537"}


id: PR:Q9USP7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mto2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C902.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.06","synonyms":[{"name":"Spom972h-mto2","type":"exact"}],"termid":"PR:Q9USP7"}


id: GO:0010824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of centrosome duplication. Centrosome duplication is the replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome cycle","termid":"GO:0046605"},{"relation_name":"regulates","term_name":"centrosome duplication","termid":"GO:0051298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of centrosome duplication","termid":"GO:0010824"}


id: GO:1904189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transformation of host cell by virus.","definition_xrefs":["GOC:TermGenie","PMID:12200142","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"},{"relation_name":"is_a","term_name":"regulation of transformation of host cell by virus","termid":"GO:1904187"},{"relation_name":"positively_regulates","term_name":"transformation of host cell by virus","termid":"GO:0019087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transformation of host cell by virus","synonyms":[{"name":"activation of transformation of host cell by virus","type":"narrow"},{"name":"activation of viral transformation","type":"narrow"},{"name":"activation of viral transformation of host cell","type":"narrow"},{"name":"positive regulation of viral transformation","type":"exact"},{"name":"positive regulation of viral transformation of host cell","type":"exact"},{"name":"up regulation of transformation of host cell by virus","type":"exact"},{"name":"up regulation of viral transformation","type":"exact"},{"name":"up regulation of viral transformation of host cell","type":"exact"},{"name":"up-regulation of transformation of host cell by virus","type":"exact"},{"name":"up-regulation of viral transformation","type":"exact"},{"name":"up-regulation of viral transformation of host cell","type":"exact"},{"name":"upregulation of transformation of host cell by virus","type":"exact"},{"name":"upregulation of viral transformation","type":"exact"},{"name":"upregulation of viral transformation of host cell","type":"exact"}],"termid":"GO:1904189"}


id: PBO:0084362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Linker nucleoporin component of the nuclear pore complex (NPC); also part of the NPC nuclear basket; contributes to nucleocytoplasmic transport and NPC biogenesis; forms stable associations with three FG-nucleoporins (Nsp1p, Nup57p, and Nup49p)","termid":"PBO:0084362"}


id: GO:0015945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methanol, CH3-OH, a colorless, flammable, mobile, poisonous liquid, widely used as a solvent.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methanol metabolic process","synonyms":[{"name":"methanol metabolism","type":"exact"}],"termid":"GO:0015945"}


id: PBO:0080172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 7","termid":"PBO:0080172"}


id: GO:0042549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the photosystem II protein complex, resulting from the phosphorylation of its structural protein subunits, in a cell actively involved in photosynthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosystem II stabilization","termid":"GO:0042549"}


id: GO:0075705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell that begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicles containing the virus. The vesicle then delivers its viral content to early endosomes, and the process ends when the viral nucleic acid is released into the host cytoplasm by its injection through the endosome membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane (obsolete GO:0075705)","synonyms":[{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane","type":"exact"},{"name":"viral penetration via endocytosis followed by genetic injection through the endosome membrane","type":"exact"}],"termid":"GO:0075705"}


id: PR:Q9P7B5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC521.02 gene.","definition_xrefs":["UniProtKB:Q9P7B5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent metalloprotease WSS1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC521.02","synonyms":[{"name":"DNA damage response protein WSS1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC521.02","type":"exact"}],"termid":"PR:Q9P7B5"}


id: GO:0030846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA polymerase II transcription termination process in which cleavage and polyadenylylation of the mRNA 3' end are coupled to transcription termination.","definition_xrefs":["PMID:18679429","PMID:27371117","GOC:txnOH","PMID:12944462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"termination of RNA polymerase II transcription, poly(A)-coupled","synonyms":[{"name":"termination of RNA polymerase II transcription, polyadenylation-coupled","type":"related"},{"name":"transcription termination from Pol II promoter, RNA polymerase(A) coupled","type":"related"},{"name":"transcription termination from Pol II promoter, poly(A) coupled","type":"related"}],"termid":"GO:0030846"}


id: PBO:0047007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A10","termid":"PBO:0047007"}


id: GO:0047778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [citrate (pro-3S)-lyase](acetyl form) + H2O = [citrate (pro-3S)-lyase](thiol form) + acetate.","definition_xrefs":["EC:3.1.2.16","MetaCyc:CITRATE-PRO-3S-LYASE-THIOLESTERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"[citrate-(pro-3S)-lyase] thiolesterase activity","secondary_identifiers":["RHEA:13657"],"synonyms":[{"name":"[citrate-(pro-3S)-lyase] thioesterase activity","type":"related"},{"name":"citrate (pro-3S)-lyase thiolesterase activity","type":"exact"},{"name":"citrate lyase deacetylase activity","type":"related"},{"name":"citrate-(pro-3S)-lyase thioesterase activity","type":"related"},{"name":"citrate-(pro-3S)-lyase thiolesterase activity","type":"related"},{"name":"citrate-(pro-3S)-lyase(acetyl-form) hydrolase activity","type":"related"}],"termid":"GO:0047778"}


id: PBO:0012539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_acquisition_of_features_of","termid":"PBO:0012539"}


id: GO:0035367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of thymine transport","termid":"GO:0035365"},{"relation_name":"positively_regulates","term_name":"thymine transport","termid":"GO:0035364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of thymine transport","synonyms":[{"name":"positive regulation of 5-methyluracil transport","type":"exact"}],"termid":"GO:0035367"}


id: RO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"transports","termid":"RO:0002020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exports","termid":"RO:0002345"}


id: PBO:0071197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 38","termid":"PBO:0071197"}


id: GO:0042479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eye photoreceptor development.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of eye photoreceptor cell development","termid":"GO:0042478"},{"relation_name":"is_a","term_name":"positive regulation of photoreceptor cell differentiation","termid":"GO:0046534"},{"relation_name":"positively_regulates","term_name":"eye photoreceptor cell development","termid":"GO:0042462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eye photoreceptor cell development","synonyms":[{"name":"activation of eye photoreceptor cell development","type":"narrow"},{"name":"positive regulation of eye photoreceptor development","type":"exact"},{"name":"stimulation of eye photoreceptor cell development","type":"narrow"},{"name":"up regulation of eye photoreceptor cell development","type":"exact"},{"name":"up-regulation of eye photoreceptor cell development","type":"exact"},{"name":"upregulation of eye photoreceptor cell development","type":"exact"}],"termid":"GO:0042479"}


id: PBO:0051795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCJ-SCHIP1 readthrough antisense RNA 1","termid":"PBO:0051795"}


id: GO:0097356
data:
  {"annotated_genes":["SJAG_03789"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114662],"is_not":false,"summary":null,"term":"GO:0097356"}]},"cv_name":"cellular_component","definition":"The perinucleolar compartment (PNC) is a subnuclear structure associated with, but structurally distinct from, the nucleolus. The PNC contains large amounts of the heterogeneous nuclear ribonucleoprotein complex (hnRNP) called hnRNP 1 (PTB). Many RNA binding proteins as well as RNA polymerase III transcripts are highly enriched in this compartment. PTB and pol III transcripts are required for the integrity of the PNC.","definition_xrefs":["PMID:21385875","Wikipedia:Perinucleolar_compartment","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear lumen","termid":"GO:0031981"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"perinucleolar compartment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perinucleolar region","type":"exact"}],"termid":"GO:0097356","terms_by_termid":{"GO:0097356":null}}


id: GO:1990045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sclerotium over time, from its formation to the mature structure. A sclerotium is a mycelial resting body, resistant to adverse environmental conditions.","definition_xrefs":["PMID:21148914","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sclerotium development","termid":"GO:1990045"}


id: PBO:0079539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase 1 like 1","termid":"PBO:0079539"}


id: GO:0044523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, damaging the extracellular matrix of muscle cells and ultimately resulting in muscle necrosis in the bitten organism.","definition_xrefs":["GOC:fj","PMID:21150580","PMID:33460638","GOC:jl","PMID:20398688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in muscle damage in another organism","termid":"GO:0044521"},{"relation_name":"is_a","term_name":"disruption of extracellular matrix of another organism","termid":"GO:0141041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in damage of muscle extracellular matrix in another organism","synonyms":[{"name":"envenomation resulting in damage of muscle extracellular matrix causing muscle necrosis in other organism","type":"exact"},{"name":"envenomation resulting in damage of muscle extracellular matrix in other organism","type":"exact"}],"termid":"GO:0044523"}


id: PBO:0056588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDC1 antisense RNA 1","termid":"PBO:0056588"}


id: PBO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup146","termid":"PBO:0002481"}


id: PBO:0064420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partner of NOB1 homolog","termid":"PBO:0064420"}


id: GO:2000500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of induction of apoptosis in response to chemical stimulus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of induction of apoptosis in response to chemical stimulus (obsolete GO:2000500)","synonyms":[{"name":"positive regulation of induction of apoptosis in response to chemical stimulus","type":"exact"},{"name":"positive regulation of induction of apoptosis in response to chemical substance","type":"exact"}],"termid":"GO:2000500"}


id: GO:0046294
data:
  {"annotated_genes":["SJAG_01457","SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91678,99617],"is_not":false,"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of formaldehyde (methanal, H2C=O), the simplest aldehyde.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"},{"relation_name":"is_a","term_name":"cellular detoxification of aldehyde","termid":"GO:0110095"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0098754","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formaldehyde catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"formaldehyde breakdown","type":"exact"},{"name":"formaldehyde catabolism","type":"exact"},{"name":"formaldehyde degradation","type":"exact"},{"name":"methanal catabolic process","type":"exact"},{"name":"methanal catabolism","type":"exact"}],"termid":"GO:0046294","terms_by_termid":{"GO:0046294":null}}


id: PBO:0012857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal 3'-5' exoribonuclease, PH-like Mtr3","termid":"PBO:0012857"}


id: PR:O13647
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8D2.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8D2.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.11","synonyms":[{"name":"Spom972h-SPBC8D2.11","type":"exact"}],"termid":"PR:O13647"}


id: GO:0061405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hydrostatic pressure stimulus. Hydrostatic pressure is the force acting on an object in a system where the fluid is at rest (as opposed to moving). The weight of the fluid above the object creates pressure on it.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to hydrostatic pressure (obsolete GO:0061405)","termid":"GO:0061405"}


id: PBO:0062002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 1","termid":"PBO:0062002"}


id: PBO:0044270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 10","termid":"PBO:0044270"}


id: PBO:0070788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 18","termid":"PBO:0070788"}


id: PBO:0073312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small EDRK-rich factor 1A pseudogene 1","termid":"PBO:0073312"}


id: GO:0030826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cGMP biosynthetic process (obsolete GO:0030826)","synonyms":[{"name":"regulation of cGMP anabolism","type":"exact"},{"name":"regulation of cGMP biosynthesis","type":"exact"},{"name":"regulation of cGMP formation","type":"exact"},{"name":"regulation of cGMP synthesis","type":"exact"}],"termid":"GO:0030826"}


id: PBO:0087335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific assembly chaperone for ribosomal protein Rpl3p; co-translationally associates with nascent Rpl3p, preventing aggregation, and facilitating nuclear import; required for biogenesis of preribosomal particles; essential gene; contains five WD-repeat motifs","termid":"PBO:0087335"}


id: GO:1990215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts vesicle-mediated transport in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30893609","PMID:24248335","PMID:22319451","PMID:31492901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host intracellular transport","termid":"GO:0052038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host vesicle-mediated transport","synonyms":[{"name":"negative regulation by symbiont of host intracellular transport","type":"broad"},{"name":"symbiont-mediated perturbation of host endosomal trafficking","type":"related"}],"termid":"GO:1990215"}


id: PBO:0084163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved iron-sulfur cluster binding protein; localized in the cytoplasm; forms a complex with Nbp35p that is involved in iron-sulfur protein assembly in the cytosol","termid":"PBO:0084163"}


id: PBO:0057631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1206","termid":"PBO:0057631"}


id: GO:1990615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that regulates actin cable formation, polarized cell growth, and cytokinesis in a formin-dependent manner. In S. cerevisiae the complex is composed of Bud14p and two Kelch family proteins, Kel1p and Kel2p.","definition_xrefs":["PMID:24828508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Kelch-containing formin regulatory complex","synonyms":[{"name":"Bud14-Kel1-Kel2 complex","type":"narrow"},{"name":"KFRC complex","type":"exact"}],"termid":"GO:1990615"}


id: PBO:0015213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate transmembrane transporter Mpc2 (predicted)","termid":"PBO:0015213"}


id: GO:0000933
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell septum whose formation is independent of nuclear division.","definition_xrefs":["GOC:clt","ISBN:0471940526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell septum","termid":"GO:0030428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"adventitious septum","termid":"GO:0000933"}


id: GO:1901206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901206)","synonyms":[{"name":"activation of adrenergic receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"activation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"positive regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up-regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"upregulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901206"}


id: GO:0006618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the signal peptide from a nascent protein during cotranslational membrane targeting.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal peptide processing","termid":"GO:0006465"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604","GO:0006605"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, signal sequence processing","synonyms":[{"name":"SRP-dependent cotranslational membrane targeting, signal sequence processing","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, signal sequence processing","type":"exact"},{"name":"signal sequence processing during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006618"}


id: PBO:0027022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_punctate_nuclear_protein_localization","termid":"PBO:0027022"}


id: PBO:0085684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; PalA/AIP1/Alix family member; interaction with the ESCRT-III subunit Snf7p suggests a relationship between pH response and multivesicular body formation","termid":"PBO:0085684"}


id: MOD:01039
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00036. Remap to MOD:00036.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01039 hydroxy aspartyl (obsolete MOD:01039)","termid":"MOD:01039"}


id: PR:O94255
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nce103 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.05c","synonyms":[{"name":"Spom972h-nce103","type":"exact"},{"name":"carbonate dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94255"}


id: PBO:0071809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 4","termid":"PBO:0071809"}


id: GO:0080051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cutin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cutin, which consists of C16-18 fatty acids, is the major component of the cuticle that covers the plant surface.","definition_xrefs":["PMID:17951461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cutin transport","termid":"GO:0080051"}


id: GO:0019345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cysteine, via the intermediate S-sulfo-L-cysteine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine biosynthetic process","termid":"GO:0019344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"cysteine biosynthetic process via S-sulfo-L-cysteine","synonyms":[{"name":"cysteine anabolism via S-sulfo-L-cysteine","type":"exact"},{"name":"cysteine biosynthesis via S-sulpho-L-cysteine","type":"exact"},{"name":"cysteine biosynthetic process via S-sulpho-L-cysteine","type":"exact"},{"name":"cysteine formation via S-sulfo-L-cysteine","type":"exact"},{"name":"cysteine synthesis via S-sulfo-L-cysteine","type":"exact"}],"termid":"GO:0019345"}


id: PBO:0036180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K20_trimethylation_during_vegetative_growth","termid":"PBO:0036180"}


id: GO:0002758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by a ligand binding to its receptor that lead to the activation or perpetuation of an innate immune response.","definition_xrefs":["PMID:11418339","GOC:jy","GOC:mah","PMID:28105028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of innate immune response","termid":"GO:0002218"},{"relation_name":"is_a","term_name":"immune response-activating signaling pathway","termid":"GO:0002757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"innate immune response-activating signaling pathway","secondary_identifiers":["GO:0010204","GO:0009870"],"synonyms":[{"name":"defence response signaling pathway, resistance gene-dependent","type":"related"},{"name":"defence response signaling pathway, resistance gene-independent","type":"related"},{"name":"defence response signalling pathway, resistance gene-dependent","type":"related"},{"name":"defence response signalling pathway, resistance gene-independent","type":"related"},{"name":"defense response signaling pathway, resistance gene-dependent","type":"related"},{"name":"defense response signaling pathway, resistance gene-independent","type":"related"},{"name":"defense response signalling pathway, resistance gene-dependent","type":"related"},{"name":"effector triggered immunity","type":"broad"},{"name":"effector-triggered immune signaling","type":"related"},{"name":"effector-triggered immunity","type":"broad"}],"termid":"GO:0002758"}


id: PBO:0062567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AF member 1 pseudogene","termid":"PBO:0062567"}


id: PATO:0001349
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mating type that indicates that the F plasmid has integrated into the chromosome.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"F minus mating type","termid":"PATO:0001348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high frequency recombinant","synonyms":[{"name":"Hfr","type":"exact"}],"termid":"PATO:0001349"}


id: PBO:0011987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family recombinase Rad51/Rhp51","termid":"PBO:0011987"}


id: GO:1903606
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103603,90577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903607"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytochrome c.","definition_xrefs":["GOC:TermGenie","PMID:19721088","GOC:dph","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome metabolic process","termid":"GO:1903604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytochrome c metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome c metabolism","type":"exact"}],"termid":"GO:1903606","terms_by_termid":{"GO:1903607":null}}


id: PBO:0074927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 95","termid":"PBO:0074927"}


id: PATO:0000014
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composite chromatic quality composed of hue, saturation and intensity parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"color","secondary_identifiers":["PATO:0000020"],"synonyms":[{"name":"colour","type":"exact"},{"name":"relative color","type":"exact"}],"termid":"PATO:0000014"}


id: GO:0070075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of the aqueous layer of the tear film from the lacrimal glands. Tears are the liquid product of a process of lacrimation to clean and lubricate the eyes. Tear fluid contains water, mucin, lipids, lysozyme, lactoferrin, lipocalin, lacritin, immunoglobulins, glucose, urea, sodium, and potassium.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"tear secretion","termid":"GO:0070075"}


id: PBO:0075238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX9 antisense RNA 1","termid":"PBO:0075238"}


id: PBO:0080586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 11","termid":"PBO:0080586"}


id: RO:0002573
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between an attribute or a qualifier and another attribute.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_modifier","termid":"RO:0002573"}


id: PBO:0089328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Pan3","termid":"PBO:0089328"}


id: PBO:0089902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily","termid":"PBO:0089902"}


id: GO:0032156
data:
  {"annotated_genes":["SJAG_03688","SJAG_03374","SJAG_00663","SJAG_01658","SJAG_02645","SJAG_03703","SJAG_04703","SJAG_04375","SJAG_01277","SJAG_04566","SJAG_01769","SJAG_00118","SJAG_04470"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90637,96240,112095,102124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032175"},{"annotations":[94037,97089,97901,93961,104080,113981,114739,96241,108904,100054],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0036391"},{"annotations":[90638,112096,102125,96242],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032152"},{"annotations":[100057,94040,97092,96245],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032151"},{"annotations":[90641,102128,112098,96247],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0032169"},{"annotations":[97093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005940"},{"annotations":[97902,97094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032176"}]},"cv_name":"cellular_component","definition":"The part of the cytoskeleton (the internal framework of a cell) composed of septins and associated proteins. Includes septin cytoskeleton-associated complexes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00663":null,"SJAG_01277":null,"SJAG_01658":null,"SJAG_01769":null,"SJAG_02645":null,"SJAG_03374":null,"SJAG_03688":null,"SJAG_03703":null,"SJAG_04375":null,"SJAG_04470":null,"SJAG_04566":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin cytoskeleton","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032156","terms_by_termid":{"GO:0005940":null,"GO:0032151":null,"GO:0032152":null,"GO:0032169":null,"GO:0032175":null,"GO:0032176":null,"GO:0036391":null}}


id: PATO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence quality inhering in a bearer by virtue of emitting light during exposure to radiation from an external source.","definition_xrefs":["web:www.thefreedictionary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescence","termid":"PATO:0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescent","termid":"PATO:0001290"}


id: GO:0061280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to mesonephric proximal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in mesonephric nephron tubule morphogenesis","termid":"GO:0061278"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in proximal tubule morphogenesis","termid":"GO:0072159"},{"relation_name":"part_of","term_name":"mesonephric proximal tubule morphogenesis","termid":"GO:0061276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in mesonephric proximal tubule morphogenesis","termid":"GO:0061280"}


id: PBO:0063428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 2","termid":"PBO:0063428"}


id: PBO:0026983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_elongated_oscillating_nucleus","termid":"PBO:0026983"}


id: GO:0090053
data:
  {"annotated_genes":["SJAG_04574","SJAG_01601","SJAG_03844","SJAG_00142"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87319,87320,95264,106616,108239],"is_not":false,"summary":null,"term":"GO:0090053"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of pericentric heterochromatin formation.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterochromatin formation","termid":"GO:0031453"},{"relation_name":"is_a","term_name":"regulation of pericentric heterochromatin formation","termid":"GO:0090052"},{"relation_name":"positively_regulates","term_name":"pericentric heterochromatin formation","termid":"GO:0031508"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01601":null,"SJAG_03844":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"positive regulation of pericentric heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of chromatin silencing at centromere","type":"exact"},{"name":"positive regulation of pericentric heterochromatin assembly","type":"exact"}],"termid":"GO:0090053","terms_by_termid":{"GO:0090053":null}}


id: PR:Q9HE11
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 43 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.01","secondary_identifiers":["UniProtKB:Q9HE11"],"synonyms":[{"name":"Spom972h-WDR43","type":"exact"},{"name":"U3 protein 5 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE11"}


id: PBO:0088845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit V","termid":"PBO:0088845"}


id: PBO:0081969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRANB2 antisense RNA 1","termid":"PBO:0081969"}


id: PBO:0030596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cytosol","termid":"PBO:0030596"}


id: PBO:0088759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase Pcy1","termid":"PBO:0088759"}


id: PBO:0049651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 5","termid":"PBO:0049651"}


id: GO:0090262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-excision repair","termid":"GO:2000819"},{"relation_name":"regulates","term_name":"transcription-coupled nucleotide-excision repair","termid":"GO:0006283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"regulation of transcription-coupled nucleotide-excision repair","termid":"GO:0090262"}


id: PBO:0058132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4433a","termid":"PBO:0058132"}


id: PBO:0091559
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"social distancing gene","termid":"PBO:0091559"}


id: PBO:0043045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHORDC1 pseudogene 1","termid":"PBO:0043045"}


id: PR:P87123
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit RPB11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.07","secondary_identifiers":["UniProtKB:P87123"],"synonyms":[{"name":"DNA-directed RNA polymerase II 14.1 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-Polr2j","type":"exact"}],"termid":"PR:P87123"}


id: PBO:0087590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; mutation is functionally complemented by human ARPC4","termid":"PBO:0087590"}


id: MOD:01237
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-cysteine residue with 4-hydroxynonenal.","definition_xrefs":["PubMed:15133838","PubMed:9629898","Unimod:53#C","PubMed:11327326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine 4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:01237"}


id: PBO:0084231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydrophilin essential in desiccation-rehydration process; cell wall protein; contains a putative GPI-attachment site","termid":"PBO:0084231"}


id: PBO:0113583
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"White-Collar for Neurospora homologS","termid":"PBO:0113583"}


id: PBO:0084973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent glycerol-3-phosphate dehydrogenase; key enzyme of glycerol synthesis, essential for growth under osmotic stress; expression regulated by high-osmolarity glycerol response pathway; protein abundance increases in response to DNA replication stress; constitutively inactivated via phosphorylation by the protein kinases Ypk1p and Ypk2p, dephosphorylation increases catalytic activity; forms a heterodimer with Pnc1p to facilitate its peroxisomal import","termid":"PBO:0084973"}


id: PBO:0004836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur ATPase involved in ribosome biogenesis Rli1 (predicted)","termid":"PBO:0004836"}


id: PBO:0039044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL4 intronic transcript 1","termid":"PBO:0039044"}


id: PBO:0028715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septation_index_in_stationary_phase","termid":"PBO:0028715"}


id: PBO:0061516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 6","termid":"PBO:0061516"}


id: PBO:0056760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL14 divergent transcript","termid":"PBO:0056760"}


id: GO:0031824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1E serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1E serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 1E receptor binding","type":"exact"},{"name":"type 1E serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031824"}


id: PBO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal tubular acidosis","termid":"PBO:0002089"}


id: PBO:0060538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase pseudogene","termid":"PBO:0060538"}


id: PBO:0051584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18 binding protein","termid":"PBO:0051584"}


id: PBO:0050688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 15","termid":"PBO:0050688"}


id: GO:0102790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 5-O-beta-D-glucoside + UDP-alpha-D-glucose = cyanin betaine + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyanidin 5,3-O-glycosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8006"],"termid":"GO:0102790"}


id: PBO:0086222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap190p; SAP185 has a paralog, SAP190, that arose from the whole genome duplication","termid":"PBO:0086222"}


id: PBO:0043035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 5","termid":"PBO:0043035"}


id: FYPO:0003545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of mitotic cell cycle arrest or delay due to regulation by the DNA replication checkpoint is greater than normal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0000173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle DNA replication checkpoint","synonyms":[{"name":"increased duration of DNA replication checkpoint","type":"broad"},{"name":"increased duration of mitotic cell cycle DNA replication checkpoint activation","type":"exact"},{"name":"mitotic cell cycle DNA replication checkpoint activated","type":"related"},{"name":"prolonged mitotic cell cycle DNA replication checkpoint","type":"exact"}],"termid":"FYPO:0003545"}


id: GO:0006750
data:
  {"annotated_genes":["SJAG_00988","SJAG_03494","SJAG_01351","SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89433,93159,104559,114281],"is_not":false,"summary":null,"term":"GO:0006750"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins.","definition_xrefs":["GOC:ai","ISBN:0198506732","GOC:al","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione metabolic process","termid":"GO:0006749"},{"relation_name":"is_a","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUTATHIONESYN-PWY"],"synonyms":[{"name":"glutathione anabolism","type":"exact"},{"name":"glutathione biosynthesis","type":"exact"},{"name":"glutathione formation","type":"exact"},{"name":"glutathione synthesis","type":"exact"}],"termid":"GO:0006750","terms_by_termid":{"GO:0006750":null}}


id: PBO:0060149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor 1 like","termid":"PBO:0060149"}


id: PBO:0066434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated endocrine specific protein 18","termid":"PBO:0066434"}


id: PBO:0084464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase of the HOG signaling pathway; activated under severe osmotic stress; mitophagy-specific regulator; plays a role in regulating Ty1 transposition","termid":"PBO:0084464"}


id: PBO:0029222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_malate_dehydrogenase_(decarboxylating)_(NAD+)_activity","termid":"PBO:0029222"}


id: PBO:0070706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 11","termid":"PBO:0070706"}


id: PBO:0086164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for rRNA maturation and ribosomal subunit biogenesis; required for 18S rRNA maturation; also required for small ribosomal subunit biogenesis; cosediments with pre-ribosomal particles; mutation decreases efficiency of +1 Ty1 frameshifting and transposition, and affects budding pattern","termid":"PBO:0086164"}


id: FYPO:0001536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of copper ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular copper level","synonyms":[{"name":"normal cellular copper accumulation","type":"related"},{"name":"normal cellular copper ion level","type":"exact"},{"name":"normal cellular copper level during mitotic cell cycle","type":"related"},{"name":"normal cellular copper level during vegetative growth","type":"exact"}],"termid":"FYPO:0001536"}


id: FYPO:0004973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere localization, a process in which a telomere is transported to, and/or maintained in, a specific location, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere localization","synonyms":[{"name":"normal telomere localisation","type":"exact"}],"termid":"FYPO:0004973"}


id: GO:0071217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external biotic stimulus, an external stimulus caused by, or produced by living things.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external biotic stimulus","termid":"GO:0043207"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"},{"relation_name":"is_a","term_name":"cellular response to external stimulus","termid":"GO:0071496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to external biotic stimulus","termid":"GO:0071217"}


id: PBO:0028822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology_during_mating","termid":"PBO:0028822"}


id: PBO:0031259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_telomere_clustering","termid":"PBO:0031259"}


id: GO:0010167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrate","termid":"GO:0010167"}


id: PBO:0051335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-36 (pseudogene)","termid":"PBO:0051335"}


id: PBO:0108966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 1C","termid":"PBO:0108966"}


id: GO:2000528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myeloid dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dendritic cell chemotaxis","termid":"GO:2000509"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell chemotaxis","termid":"GO:2000527"},{"relation_name":"negatively_regulates","term_name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid dendritic cell chemotaxis","termid":"GO:2000528"}


id: PBO:0036218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_threonine_phosphorylation_at_Thr-Pro_site_during_vegetative_growth","termid":"PBO:0036218"}


id: GO:0044554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of heart contraction of another organism.","definition_xrefs":["GOC:jl","PMID:20923766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"modulation of biological quality in another organism","termid":"GO:0044553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of heart rate in another organism","synonyms":[{"name":"modulation of heart rate in other organism","type":"exact"},{"name":"regulation of heart rate in other organism","type":"exact"}],"termid":"GO:0044554"}


id: GO:2000726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"is_a","term_name":"negative regulation of cardiocyte differentiation","termid":"GO:1905208"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell differentiation","termid":"GO:2000725"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell differentiation","synonyms":[{"name":"negative regulation of cardiomyocyte differentiation","type":"exact"},{"name":"negative regulation of heart muscle cell differentiation","type":"related"}],"termid":"GO:2000726"}


id: GO:0060243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell growth in response to increased cell density.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"part_of","term_name":"contact inhibition","termid":"GO:0060242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell growth involved in contact inhibition","termid":"GO:0060243"}


id: GO:1900839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ergot alkaloid biosynthetic process","termid":"GO:1900824"},{"relation_name":"is_a","term_name":"regulation of fumigaclavine C biosynthetic process","termid":"GO:1900837"},{"relation_name":"positively_regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"up regulation of fumigaclavine C biosynthetic process","type":"exact"},{"name":"up-regulation of fumigaclavine C biosynthetic process","type":"exact"},{"name":"upregulation of fumigaclavine C biosynthetic process","type":"exact"}],"termid":"GO:1900839"}


id: SO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 4th residue (a lysine), from the start of the H4 protein is tri-methylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K4_trimethylation_site","synonyms":[{"name":" H4K4me3","type":"exact"},{"name":"H4K4 trimethylation site","type":"exact"}],"termid":"SO:0001950"}


id: GO:0102412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = valerena-4,7(11)-diene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.139","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"valerena-4,7(11)-diene synthase activity","secondary_identifiers":["MetaCyc:RXN-13769","RHEA:34467"],"termid":"GO:0102412"}


id: GO:0015843
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072489"}]},"cv_name":"biological_process","definition":"The directed movement of methylammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amine transport","termid":"GO:0015837"},{"relation_name":"is_a","term_name":"one-carbon compound transport","termid":"GO:0019755"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"methylammonium transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015843","terms_by_termid":{"GO:0072489":null}}


id: PBO:0054794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2208","termid":"PBO:0054794"}


id: GO:1902148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to cytokinesis checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to cell cycle checkpoint signaling","termid":"GO:1902146"},{"relation_name":"is_a","term_name":"regulation of response to cytokinesis checkpoint signaling","termid":"GO:1902147"},{"relation_name":"positively_regulates","term_name":"response to cytokinesis checkpoint signaling","termid":"GO:0072399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to cytokinesis checkpoint signaling","secondary_identifiers":["GO:1902150"],"synonyms":[{"name":"activation of cytokinesis checkpoint effector process","type":"exact"},{"name":"activation of response to cytokinesis checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in cytokinesis checkpoint","type":"exact"},{"name":"positive regulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"positive regulation of response to signal involved in cytokinesis checkpoint","type":"exact"},{"name":"up regulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"up regulation of response to cytokinesis checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in cytokinesis checkpoint","type":"exact"},{"name":"up-regulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"up-regulation of response to cytokinesis checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in cytokinesis checkpoint","type":"exact"},{"name":"upregulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"upregulation of response to cytokinesis checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in cytokinesis checkpoint","type":"exact"}],"termid":"GO:1902148"}


id: PBO:0085256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein required for autophagy and CVT; required for cytoplasm-to-vacuole targeting (Cvt) pathway and efficient macroautophagy; cycles between the phagophore assembly site (PAS) and non-PAS locations; forms a complex with Atg9p and Atg27p","termid":"PBO:0085256"}


id: PBO:0085335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylserine synthase; functions in phospholipid biosynthesis; transcriptionally repressed by myo-inositol and choline","termid":"PBO:0085335"}


id: PR:O60104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.08","synonyms":[{"name":"Spom972h-med7","type":"exact"},{"name":"mediator complex subunit 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60104"}


id: GO:0018096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of (S,Z)-S-(2-aminovinyl)cysteine forming an intra-polypeptide cross-link between serine and cysteine.","definition_xrefs":["RESID:AA0204"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-(2-aminovinyl)-D-cysteine (obsolete GO:0018096)","termid":"GO:0018096"}


id: PBO:0011487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional dihydropteroatesynthase/2-amino-4-hydroxy-6-hydro xymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase (predicted)","termid":"PBO:0011487"}


id: SO:0000468
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One of the pieces of sequence that make up a golden path.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"golden_path","termid":"SO:0000688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golden_path_fragment","synonyms":[{"name":"golden path fragment","type":"exact"}],"termid":"SO:0000468"}


id: FYPO:0003645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein serine phosphorylation during vegetative growth (obsolete FYPO:0003645)","synonyms":[{"name":"normal peptidyl-serine phosphorylation during vegetative growth","type":"exact"},{"name":"normal protein serine phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003645"}


id: GO:1990876
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the nuclear pore complex (NPC) that faces the cytoplasm.","definition_xrefs":["PMID:8422679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005643","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic side of nuclear pore","synonyms":[{"name":"cytoplasmic side of NPC","type":"exact"},{"name":"cytoplasmic side of nuclear pore complex","type":"exact"},{"name":"cytoplasmic side of nucleopore","type":"exact"}],"termid":"GO:1990876"}


id: PBO:0040080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase B","termid":"PBO:0040080"}


id: FYPO:0003539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) over the entire length of the chromosomes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased global homologous chromosome pairing","synonyms":[{"name":"decreased generalised homologous chromosome pairing","type":"exact"},{"name":"decreased global homologous chromosome pairing at meiosis","type":"exact"},{"name":"decreased global synapsis","type":"exact"},{"name":"globally decreased homologous chromosome pairing","type":"exact"},{"name":"reduced global homologous chromosome pairing","type":"exact"}],"termid":"FYPO:0003539"}


id: GO:0003912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).","definition_xrefs":["EC:2.7.7.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140097","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"DNA nucleotidylexotransferase activity","secondary_identifiers":["MetaCyc:DNA-NUCLEOTIDYLEXOTRANSFERASE-RXN"],"synonyms":[{"name":"TdT","type":"related"},{"name":"addase activity","type":"related"},{"name":"deoxynucleotidyl terminal transferase activity","type":"related"},{"name":"deoxyribonucleic acid nucleotidyltransferase activity","type":"related"},{"name":"deoxyribonucleic nucleotidyltransferase activity","type":"related"},{"name":"nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"related"},{"name":"terminal addition enzyme activity","type":"related"},{"name":"terminal deoxynucleotide transferase activity","type":"related"},{"name":"terminal deoxynucleotidyltransferase activity","type":"related"},{"name":"terminal deoxyribonucleotidyltransferase activity","type":"related"},{"name":"terminal transferase activity","type":"related"}],"termid":"GO:0003912"}


id: GO:0044692
data:
  {"annotated_genes":["SJAG_04682","SJAG_00686"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85857,101033],"is_not":false,"summary":null,"term":"GO:0044692"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an exoribonuclease.","definition_xrefs":["PMID:22570495","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease activator activity","termid":"GO:0170054"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"exoribonuclease activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044692","terms_by_termid":{"GO:0044692":null}}


id: FYPO:0009087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of magnesium chloride and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to magnesium chloride and sodium dodecyl sulfate","synonyms":[{"name":"resistance to magnesium chloride and SDS","type":"exact"},{"name":"resistance to magnesium chloride and SDS during vegetative growth","type":"exact"},{"name":"resistance to magnesium chloride and SDS in combination","type":"exact"},{"name":"resistance to magnesium chloride and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to magnesium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to magnesium chloride and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to magnesium chloride and SDS","type":"exact"},{"name":"resistant to magnesium chloride and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009087"}


id: PR:P07799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- top1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P07799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.14c","synonyms":[{"name":"DNA topoisomerase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-top1","type":"exact"}],"termid":"PR:P07799"}


id: PBO:0050150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 6","termid":"PBO:0050150"}


id: GO:0140575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Oxidation of monodehydroascorbate outside of a membrane coupled to the reduction of L-ascorbate to monodehydro-L-ascorbate radical on the inner side of a membrane. Electrons get transferred across the membrane during the reaction.","definition_xrefs":["PMID:1623014","RHEA:66524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"transmembrane monodehydroascorbate reductase activity","termid":"GO:0140575"}


id: PBO:0080270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 33 pseudogene","termid":"PBO:0080270"}


id: PBO:0074422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 21","termid":"PBO:0074422"}


id: PBO:0091912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf8 (frameshifted)","termid":"PBO:0091912"}


id: PBO:0045005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damage induced long noncoding RNA","termid":"PBO:0045005"}


id: PBO:0040936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 7","termid":"PBO:0040936"}


id: PBO:0004197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Aps2 (predicted)","termid":"PBO:0004197"}


id: PBO:0080672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wolframin ER transmembrane glycoprotein","termid":"PBO:0080672"}


id: PBO:0060343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IXA","termid":"PBO:0060343"}


id: GO:0030805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide catabolic process","termid":"GO:0030811"},{"relation_name":"regulates","term_name":"cyclic nucleotide catabolic process","termid":"GO:0009214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"regulation of cyclic nucleotide catabolic process","synonyms":[{"name":"regulation of cyclic nucleotide breakdown","type":"exact"},{"name":"regulation of cyclic nucleotide catabolism","type":"exact"},{"name":"regulation of cyclic nucleotide degradation","type":"exact"}],"termid":"GO:0030805"}


id: GO:2001006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan biosynthetic process","termid":"GO:0032951"},{"relation_name":"regulates","term_name":"cellulose biosynthetic process","termid":"GO:0030244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cellulose biosynthetic process","synonyms":[{"name":"regulation of cellulose anabolism","type":"exact"},{"name":"regulation of cellulose biosynthesis","type":"exact"},{"name":"regulation of cellulose formation","type":"exact"},{"name":"regulation of cellulose synthesis","type":"exact"}],"termid":"GO:2001006"}


id: GO:0015272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by an inwardly-rectifying voltage-gated channel, where the inward rectification is due to a voltage-dependent block of the channel pore by ATP. An inwardly rectifying current-voltage relation is one where at any given driving force the inward flow of K+ ions exceeds the outward flow for the opposite driving force.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inward rectifier potassium channel activity","termid":"GO:0005242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ATP-activated inward rectifier potassium channel activity","secondary_identifiers":["Reactome:R-HSA-5683209"],"termid":"GO:0015272"}


id: PBO:0048589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain family member 3","termid":"PBO:0048589"}


id: PBO:0071507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 10","termid":"PBO:0071507"}


id: SO:1000108
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000108 mutaton_causing_inframe_polypeptide_C_terminal_elongation (obsolete SO:1000108)","synonyms":[{"name":"inframe_polypeptide C-terminal elongation","type":"exact"},{"name":"mutaton causing inframe polypeptide C terminal elongation","type":"exact"}],"termid":"SO:1000108"}


id: PBO:0088477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RagA/B GTPase Gtr1","termid":"PBO:0088477"}


id: GO:0000750
data:
  {"annotated_genes":["SJAG_03340","SJAG_01978","SJAG_01718","SJAG_02923","SJAG_01345","SJAG_02233","SJAG_00993","SJAG_00990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84313,103262],"is_not":false,"summary":null,"term":"GO:0000750"},{"annotations":[89448],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[88318,102393,93190,89449,85387,92519],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"}]},"cv_name":"biological_process","definition":"A signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation with cellular fusion. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"},{"relation_name":"part_of","term_name":"response to pheromone triggering conjugation with cellular fusion","termid":"GO:0000749"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02233":null,"SJAG_02923":null,"SJAG_03340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"pheromone-dependent signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030454","GO:0007330"],"synonyms":[{"name":"transduction of mating signal","type":"broad"}],"termid":"GO:0000750","terms_by_termid":{"GO:0000750":null,"GO:0071507":null,"GO:0090029":null}}


id: GO:0047832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5D-5-O-methyl-chiro-inositol + NADP+ = 2D-5-O-methyl-2,3,5/4,6-pentahydroxycyclohexanone + H+ + NADPH.","definition_xrefs":["RHEA:20437","EC:1.1.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-pinitol dehydrogenase activity","secondary_identifiers":["MetaCyc:D-PINITOL-DEHYDROGENASE-RXN","KEGG_REACTION:R03498"],"synonyms":[{"name":"1D-3-O-methyl-chiro-inositol:NADP+ oxidoreductase activity","type":"related"},{"name":"5D-5-O-methyl-chiro-inositol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047832"}


id: GO:0120303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism changes its pigmentation (lightening in response to a brighter environment or darkening in response to a dimmer environment) in response to a change in light intensity detected by melanopsin-expressing eye cells.","definition_xrefs":["GOC:krc","PMID:29239123","PMID:32898924","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"background adaptation","termid":"GO:0120302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visually-mediated background adaptation","termid":"GO:0120303"}


id: PATO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having a shape that resembles a many-lobed \\\"berry,\\\" such as a raspberry.","definition_xrefs":["wikipedia:https://en.wikipedia.org/wiki/Acinus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lobed","termid":"PATO:0001979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acinus","termid":"PATO:0002378"}


id: PBO:0081972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2","termid":"PBO:0081972"}


id: SO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a cyanelle, a photosynthetic plastid found in algae.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_sequence","synonyms":[{"name":"cyanelle sequence","type":"exact"}],"termid":"SO:0000746"}


id: PBO:0075542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E22, pseudogene","termid":"PBO:0075542"}


id: FYPO:0002983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, does not occur during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation during cellular response to DNA damage (obsolete FYPO:0002983)","synonyms":[{"name":"abolished protein serine phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein serine phosphorylation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0002983"}


id: GO:0044441
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:cilia","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ciliary part (obsolete GO:0044441)","synonyms":[{"name":"flagellar part","type":"narrow"},{"name":"flagellum component","type":"narrow"},{"name":"cilial part","type":"exact"},{"name":"cilium part","type":"exact"},{"name":"flagellum part","type":"narrow"},{"name":"microtubule-based flagellum part","type":"exact"}],"termid":"GO:0044441"}


id: PBO:0029718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_processing","termid":"PBO:0029718"}


id: PBO:0080068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 33","termid":"PBO:0080068"}


id: PBO:0041696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 2","termid":"PBO:0041696"}


id: SO:0000888
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is maternally_imprinted.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"maternally_imprinted","termid":"SO:0000135"},{"relation_name":"is_a","term_name":"epigenetically_modified_gene","termid":"SO:0000898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally_imprinted_gene","synonyms":[{"name":"maternally imprinted gene","type":"exact"}],"termid":"SO:0000888"}


id: PBO:0087739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Snt2C complex; physically associates with Snt2p and Rpd3p; along with Snt2p, recruits Rpd3p to a small number of promoters; also colocalizes with Snt2p, independently of Rpd3p, to promoters of stress response genes in response to oxidative stress; contains ATP/GTP-binding site motif A; null mutant exhibits increased cellular volume, large drooping buds with elongated necks; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087739"}


id: PBO:0048729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycolipid transfer protein pseudogene 1","termid":"PBO:0048729"}


id: PBO:0004562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Snx3 (predicted)","termid":"PBO:0004562"}


id: PBO:0046026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B subunit gamma","termid":"PBO:0046026"}


id: PBO:0070062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 19, pseudogene","termid":"PBO:0070062"}


id: PBO:0041532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 96","termid":"PBO:0041532"}


id: PBO:0090201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone N-acetyltransferase Naa40/NatD","termid":"PBO:0090201"}


id: GO:0017074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the N-propeptide of collagen chain alpha-1(I) at Pro-Gln and of alpha-1(II) and alpha-2(I) chains at Ala-Gln.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete procollagen N-endopeptidase activity (obsolete GO:0017074)","synonyms":[{"name":"aminoprocollagen peptidase activity","type":"related"},{"name":"aminoterminal procollagen peptidase activity","type":"related"},{"name":"procollagen N-endopeptidase activity","type":"exact"},{"name":"procollagen N-proteinase activity","type":"related"},{"name":"procollagen N-terminal peptidase activity","type":"related"},{"name":"procollagen N-terminal proteinase activity","type":"related"},{"name":"procollagen aminopeptidase activity","type":"related"},{"name":"procollagen aminoterminal protease activity","type":"related"},{"name":"type I/II procollagen N-proteinase activity","type":"related"},{"name":"type III procollagen","type":"related"}],"termid":"GO:0017074"}


id: PBO:0047145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 180 member A","termid":"PBO:0047145"}


id: GO:0036306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth that results in the increase in length of the embryonic heart tube. The embryonic heart tube is an epithelial tube that will give rise to the mature heart.","definition_xrefs":["PMID:15901664","GOC:BHF","GOC:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube elongation","termid":"GO:0036306"}


id: GO:0140988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ADP from one side of a membrane to the other according to the reaction: ADP(out) + phosphate(in) = ADP(in) + phosphate(out).","definition_xrefs":["PMID:15123600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP transmembrane transporter activity","termid":"GO:0015217"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ADP:phosphate antiporter activity","secondary_identifiers":["RHEA:65844"],"synonyms":[{"name":"ADP:inorganic phosphate antiporter activity","type":"exact"},{"name":"inorganic phosphate:ADP antiporter activity","type":"exact"}],"termid":"GO:0140988"}


id: GO:0019828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of aspartic-type endopeptidases.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0004857","GO:0098772","GO:0030234","GO:0140678"],"is_obsolete":false,"name":"aspartic-type endopeptidase inhibitor activity","synonyms":[{"name":"aspartic protease inhibitor activity","type":"narrow"}],"termid":"GO:0019828"}


id: GO:0010919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of inositol phosphate biosynthetic process","synonyms":[{"name":"regulation of inositol phosphate biosynthesis","type":"exact"}],"termid":"GO:0010919"}


id: PBO:0041933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 1","termid":"PBO:0041933"}


id: PBO:0074772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3E","termid":"PBO:0074772"}


id: PBO:0083280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the essential gene UGP1 gene and uncharacterized ORF YKL037W","termid":"PBO:0083280"}


id: PBO:0069608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 885, pseudogene","termid":"PBO:0069608"}


id: PBO:0061270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase 1","termid":"PBO:0061270"}


id: GO:0030039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA unwinding factor (obsolete GO:0030039)","synonyms":[{"name":"DNA unwinding factor","type":"exact"}],"termid":"GO:0030039"}


id: PR:P04910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:21516229","PMID:15226425","PomBase:MAH","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2","termid":"PR:000027545"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.06c","secondary_identifiers":["PR:000027546","UniProtKB:P04910"],"synonyms":[{"name":"SPAC19G12.06C","type":"related"},{"name":"Spom972h-HTA2","type":"exact"}],"termid":"PR:P04910"}


id: PBO:0017724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spa2 interacting protein Pos1","termid":"PBO:0017724"}


id: PBO:0065533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre T cell antigen receptor alpha","termid":"PBO:0065533"}


id: PBO:0016980
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this is not NADH complex associated in yeast, which do not have the other 40 subunits that are present in that complex in mammals, see associated refs for more info on the human protein","termid":"PBO:0016980"}


id: GO:2000145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell motility.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell motility","synonyms":[{"name":"regulation of cell locomotion","type":"exact"},{"name":"regulation of cell movement","type":"related"},{"name":"regulation of movement of a cell","type":"exact"}],"termid":"GO:2000145"}


id: FYPO:0001805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which adenine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal adenine import","synonyms":[{"name":"normal adenine import across plasma membrane","type":"exact"},{"name":"normal adenine import during mitotic cell cycle","type":"related"},{"name":"normal adenine import during vegetative growth","type":"exact"},{"name":"normal adenine import into cell","type":"exact"},{"name":"normal adenine uptake","type":"exact"}],"termid":"FYPO:0001805"}


id: GO:0008198
data:
  {"annotated_genes":["SJAG_00532","SJAG_03862","SJAG_03225","SJAG_01418","SJAG_00221"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89086,96705,97356,100864,110017],"is_not":false,"summary":null,"term":"GO:0008198"}]},"cv_name":"molecular_function","definition":"Binding to a ferrous iron ion, Fe(II).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion binding","termid":"GO:0005506"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00532":null,"SJAG_01418":null,"SJAG_03225":null,"SJAG_03862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ferrous iron binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008198","terms_by_termid":{"GO:0008198":null}}


id: GO:0062151
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that is capable of catalase activity.","definition_xrefs":["PMID:10656833","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"catalase complex","termid":"GO:0062151"}


id: GO:1905067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in heart development.","definition_xrefs":["GO_REF:0000058","PMID:25034767","GOC:bc","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in heart development (obsolete GO:1905067)","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt signaling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt-activated signaling pathway involved in heart development","type":"narrow"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:1905067"}


id: PBO:0083450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene COX20/YDR231C","termid":"PBO:0083450"}


id: PBO:0074162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F5","termid":"PBO:0074162"}


id: PBO:0070403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP9 pre-mRNA splicing factor","termid":"PBO:0070403"}


id: PBO:0056137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper transcription factor like 1","termid":"PBO:0056137"}


id: PBO:0042651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y like 2","termid":"PBO:0042651"}


id: PBO:0017442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_activity_of","termid":"PBO:0017442"}


id: GO:0140681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri- or a dimethyl-lysine residue at position 36 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:21914792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K36 demethylase activity","termid":"GO:0051864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0032452","GO:0140096","GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"histone H3K36me2/H3K36me3 demethylase activity","secondary_identifiers":["EC:1.14.11.69","RHEA:60236","MetaCyc:RXN-20643"],"synonyms":[{"name":"histone H3-tri/dimethyl-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3K36me2 demethylase activity","type":"broad"},{"name":"histone H3K36me3 demethylase activity","type":"related"}],"termid":"GO:0140681"}


id: GO:0010341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a gibberellin = S-adenosyl-L-homocysteine + a gibberellin methyl ester.","definition_xrefs":["PMID:17220201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl-O-methyltransferase activity","termid":"GO:0010340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gibberellin carboxyl-O-methyltransferase activity","termid":"GO:0010341"}


id: PBO:0049549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 12","termid":"PBO:0049549"}


id: GO:0008281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with sulfonylurea, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"sulfonylurea receptor activity","synonyms":[{"name":"sulphonylurea receptor activity","type":"exact"}],"termid":"GO:0008281"}


id: PBO:0044879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 6A","termid":"PBO:0044879"}


id: FYPO:0005577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during meiotic cell cycle","termid":"FYPO:0006765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein phosphorylation during meiotic cell cycle","synonyms":[{"name":"reduced protein phosphorylation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005577"}


id: FYPO:0005115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated and has an abnormal shape featuring a constriction at the center of the cell, corresponding to the cell division site. In some such cells, the diameter at the ends is much greater than in wild-type cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"elongated vegetative cell with central constriction","synonyms":[{"name":"cell morphology, elongated dumbbell","type":"related"},{"name":"cell morphology, long dumbbell","type":"related"},{"name":"elongated cell with central constriction during mitotic cell cycle","type":"related"},{"name":"elongated cell with central constriction during vegetative growth","type":"exact"},{"name":"elongated dumbbell morphology","type":"related"},{"name":"elongated dumbbell-shaped vegetative cell","type":"related"},{"name":"elongated swollen vegetative cell with constricted region at cell division site","type":"exact"}],"termid":"FYPO:0005115"}


id: GO:0048284
data:
  {"annotated_genes":["SJAG_01697","SJAG_00430","SJAG_03386","SJAG_01324","SJAG_00826","SJAG_01379","SJAG_03889","SJAG_00031","SJAG_02595","SJAG_05194","SJAG_01633","SJAG_00810","SJAG_03403","SJAG_00557","SJAG_03536","SJAG_04739","SJAG_04023","SJAG_00029","SJAG_01772","SJAG_04966","SJAG_02241","SJAG_02587","SJAG_04978","SJAG_01357","SJAG_00171","SJAG_04513","SJAG_01080","SJAG_00855","SJAG_03005","SJAG_03915","SJAG_02286","SJAG_01613","SJAG_00204","SJAG_01072","SJAG_03670","SJAG_03347","SJAG_00304","SJAG_02656","SJAG_03137","SJAG_04936","SJAG_01598","SJAG_02045","SJAG_02737","SJAG_00330","SJAG_02384","SJAG_00380","SJAG_02315","SJAG_04909","SJAG_05184","SJAG_03011","SJAG_03848","SJAG_01299","SJAG_01370","SJAG_02433","SJAG_03072","SJAG_03552","SJAG_02265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85875,114539],"is_not":false,"summary":null,"term":"GO:0048284"},{"annotations":[88994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[86330,95845,113027,97252,95642,90456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[92090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[113073,87524,83933,87134,84697,95354,107591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000742"},{"annotations":[88071,92236,101018,100775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008053"},{"annotations":[101019],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990627"},{"annotations":[102569,98180],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010637"},{"annotations":[97582],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061192"},{"annotations":[84698],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0048288"},{"annotations":[93766,106396],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061191"},{"annotations":[93536],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032889"},{"annotations":[101830],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[95645,113664,90459,112319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097576"},{"annotations":[112961,105558,96388,87306,97257,106398,96093,96447,100757,110645,96886,87433,104407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042144"},{"annotations":[103516,97217,96034,105791,86725,94244,113627,108817,96984,104814,113666,114644,96349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006906"},{"annotations":[105941,91699,104156,113737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The creation of a single organelle from two or more organelles.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00031":null,"SJAG_00171":null,"SJAG_00204":null,"SJAG_00304":null,"SJAG_00330":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00810":null,"SJAG_00826":null,"SJAG_00855":null,"SJAG_01072":null,"SJAG_01080":null,"SJAG_01299":null,"SJAG_01324":null,"SJAG_01357":null,"SJAG_01370":null,"SJAG_01379":null,"SJAG_01598":null,"SJAG_01613":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_02045":null,"SJAG_02241":null,"SJAG_02265":null,"SJAG_02286":null,"SJAG_02315":null,"SJAG_02384":null,"SJAG_02433":null,"SJAG_02587":null,"SJAG_02595":null,"SJAG_02656":null,"SJAG_02737":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03347":null,"SJAG_03386":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_03915":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04909":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_05184":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organelle fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048284","terms_by_termid":{"GO:0000742":null,"GO:0006906":null,"GO:0008053":null,"GO:0010637":null,"GO:0016320":null,"GO:0032889":null,"GO:0034058":null,"GO:0035493":null,"GO:0042144":null,"GO:0048210":null,"GO:0048280":null,"GO:0048284":null,"GO:0048288":null,"GO:0061191":null,"GO:0061192":null,"GO:0097576":null,"GO:1990627":null}}


id: PBO:0030237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus","termid":"PBO:0030237"}


id: PBO:0058237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4525","termid":"PBO:0058237"}


id: PBO:0002195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36/L42","termid":"PBO:0002195"}


id: PBO:0053359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 265-2, pseudogene","termid":"PBO:0053359"}


id: SO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A partially_duplicated_transcript where the 5' end of the transcript is duplicated.","direct_ancestors":[{"relation_name":"is_a","term_name":"partially_duplicated_transcript","termid":"SO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_duplicated_transcript","synonyms":[{"name":"5' duplicated transcript","type":"exact"},{"name":"five prime duplicated transcript","type":"exact"},{"name":"five prime partially duplicated transcript","type":"exact"}],"termid":"SO:0002245"}


id: GO:0036287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iloperidone stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to monoamine","termid":"GO:0071867"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iloperidone","termid":"GO:0036287"}


id: PBO:0054717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2126","termid":"PBO:0054717"}


id: PBO:0033754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proteolysis_during_vegetative_growth","termid":"PBO:0033754"}


id: GO:0045227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular polysaccharide biosynthetic process","termid":"GO:0045226"},{"relation_name":"is_a","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"capsule polysaccharide biosynthetic process","synonyms":[{"name":"capsular polysaccharide biosynthesis","type":"exact"},{"name":"capsular polysaccharide biosynthetic process","type":"exact"},{"name":"capsule polysaccharide anabolism","type":"exact"},{"name":"capsule polysaccharide biosynthesis","type":"exact"},{"name":"capsule polysaccharide formation","type":"exact"},{"name":"capsule polysaccharide synthesis","type":"exact"}],"termid":"GO:0045227"}


id: PBO:0031042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_organization","termid":"PBO:0031042"}


id: PBO:0030793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spore_morphology","termid":"PBO:0030793"}


id: PBO:0071468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 9","termid":"PBO:0071468"}


id: PBO:0069889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1178, pseudogene","termid":"PBO:0069889"}


id: PBO:0049324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIA subunit 1 like","termid":"PBO:0049324"}


id: PBO:0034609
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_elongated_germ_tube_and_fragmented_nucleus","termid":"PBO:0034609"}


id: PBO:0080071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 35","termid":"PBO:0080071"}


id: PBO:0071000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 2","termid":"PBO:0071000"}


id: GO:0098597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Learning that occurs through observing the behavior of others.","definition_xrefs":["Wikipedia:Observational_learning&oldid=603524137","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning","termid":"GO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"observational learning","secondary_identifiers":["Wikipedia:Observational_learning"],"termid":"GO:0098597"}


id: GO:0102896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (10E,12Z,15Z)-9-hydroperoxyoctadeca-10,12,15-trienoate = colnelenate + H2O.","definition_xrefs":["EC:4.2.1.121","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"colnelenate synthase activity","secondary_identifiers":["RHEA:28178","MetaCyc:RXN-8498"],"termid":"GO:0102896"}


id: GO:0001223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription coactivator, a protein involved in positive regulation of transcription via protein-protein interactions with transcription factors and other proteins that positively regulate transcription. Transcription coactivators do not bind DNA directly, but rather mediate protein-protein interactions between activating transcription factors and the basal transcription machinery.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coregulator binding","termid":"GO:0001221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"transcription coactivator binding","secondary_identifiers":["GO:0001225"],"synonyms":[{"name":"RNA polymerase II transcription coactivator binding","type":"related"}],"termid":"GO:0001223"}


id: PBO:0038823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 29","termid":"PBO:0038823"}


id: PBO:0044023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 alpha 2","termid":"PBO:0044023"}


id: PBO:0067399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 505, pseudogene","termid":"PBO:0067399"}


id: GO:0045467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R7 photoreceptor over time, from its formation to the mature structure. The R7 photoreceptor is the last photoreceptor to develop in the ommatidium.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R7 cell development","termid":"GO:0045467"}


id: PBO:0086809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YHR022C is not an essential gene","termid":"PBO:0086809"}


id: PBO:0056045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTO1 maturation factor of ABCE1","termid":"PBO:0056045"}


id: GO:1901950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement a dense core granule within a cell.","definition_xrefs":["PMID:23358451","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"},{"relation_name":"is_a","term_name":"dense core granule localization","termid":"GO:0032253"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"dense core granule transport","synonyms":[{"name":"dense core vesicle transport","type":"exact"}],"termid":"GO:1901950"}


id: FYPO:0001515
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007770"},{"annotations":[115381,115380,115382,115384],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"},{"relation_name":"is_a","term_name":"abnormal telomere localization","termid":"FYPO:0007418"},{"relation_name":"is_a","term_name":"abnormal heterochromatin tethering at nuclear periphery","termid":"FYPO:0007768"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null,"SJAG_03892":null},"genotype_count":5,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomere tethering at nuclear periphery during vegetative growth","references_by_uniquename":{"PMID:24184107":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892","SJAG_03449","SJAG_01834"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pom152delta","vps4delta","man1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal mitotic telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"abnormal telomere anchoring at nuclear periphery during vegetative growth","type":"exact"},{"name":"abnormal telomere tethering at nuclear periphery during mitotic cell cycle","type":"related"},{"name":"abnormal telomere tethering to NE during vegetative growth","type":"exact"}],"termid":"FYPO:0001515","terms_by_termid":{"FYPO:0004890":null,"FYPO:0007770":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0045963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"egl-9 family hypoxia inducible factor 2","termid":"PBO:0045963"}


id: GO:0070423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing (NOD) protein receptor, and ending with regulation of a downstream cellular process.","definition_xrefs":["PMID:17944960","PMID:18585455","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-binding oligomerization domain containing signaling pathway (obsolete GO:0070423)","synonyms":[{"name":"NOD signaling pathway","type":"exact"},{"name":"nucleotide-binding oligomerization domain containing signalling pathway","type":"exact"}],"termid":"GO:0070423"}


id: GO:0106431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction N6-methyl-(d)ATP + H2O = N6-methyl-(d)AMP + diphosphate + H+.","definition_xrefs":["PMID:32144205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N6-methyl-(d)ATP hydrolase activity","termid":"GO:0106431"}


id: FYPO:0005127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from late meiotic genes measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth). Late meiotic genes are normally transcribed during spore maturation.","definition_xrefs":["PMID:17927811","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased level of late meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of late meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of late meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of late meiotic gene mRNA during vegetative growth during mitotic cell cycle","type":"related"},{"name":"increased level of late meiotic gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005127"}


id: PBO:0059928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 14","termid":"PBO:0059928"}


id: FYPO:0007050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular stress response to zinc ions is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during cellular response to zinc ion","termid":"FYPO:0005291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA level during stress response to zinc ion","synonyms":[{"name":"increased RNA accumulation during stress response to zinc ion","type":"related"},{"name":"increased RNA level during cellular response to excess zinc","type":"exact"},{"name":"increased RNA level during cellular response to high zinc level","type":"exact"},{"name":"increased RNA level during cellular response to replete zinc","type":"related"},{"name":"increased RNA level during cellular stress response to zinc ion","type":"exact"},{"name":"increased RNA level during response to zinc ion stress","type":"exact"},{"name":"increased RNA level during response to zinc toxicity","type":"related"},{"name":"increased RNA level during stress response to zinc","type":"exact"},{"name":"increased RNA level during stress response to zinc ion during mitotic cell cycle","type":"related"},{"name":"increased RNA level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"increased mRNA level during stress response to zinc ion","type":"narrow"},{"name":"increased transcript level during stress response to zinc ion","type":"exact"}],"termid":"FYPO:0007050"}


id: GO:0050283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine O-sulfate + H2O = pyruvate + NH3 + sulfate.","definition_xrefs":["EC:4.3.1.10","MetaCyc:SERINE-SULFATE-AMMONIA-LYASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"serine-sulfate ammonia-lyase activity","secondary_identifiers":["RHEA:15605"],"synonyms":[{"name":"(L-SOS)lyase activity","type":"related"},{"name":"L-serine-O-sulfate ammonia-lyase (pyruvate-forming)","type":"related"},{"name":"serine-sulphate ammonia-lyase activity","type":"exact"}],"termid":"GO:0050283"}


id: PBO:0030323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_oleoyl-CoA_ligase_activity","termid":"PBO:0030323"}


id: GO:0008196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving vitellogenin, and delivering vitellogenin into the cell via endocytosis.","definition_xrefs":["GOC:bf","PMID:12429745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"vitellogenin receptor activity","termid":"GO:0008196"}


id: GO:0140550
data:
  {"annotated_genes":["SJAG_02657"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115075],"is_not":false,"summary":null,"term":"GO:0140550"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of phosphatidylinositol-4,5-bisphosphate.","definition_xrefs":["PMID:33172987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid sensor activity","termid":"GO:0106254"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0003674","GO:0140299"],"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylinositol-4,5-bisphosphate sensing activity","type":"exact"}],"termid":"GO:0140550","terms_by_termid":{"GO:0140550":null}}


id: GO:0052789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->3)-beta-D-mannosidic linkages in mannans, releasing mannose.","definition_xrefs":["GOC:mengo_curators","EC:3.2.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidase activity","termid":"GO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"mannan 1,3-beta-mannosidase activity","synonyms":[{"name":"1,3-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"beta-1,3-mannan 3-mannanohydrolase activity","type":"related"},{"name":"exo-1,3-beta-mannanase activity","type":"related"},{"name":"exo-1,3-mannanase activity","type":"related"},{"name":"exo-beta-1,3-mannase activity","type":"related"}],"termid":"GO:0052789"}


id: PBO:0003149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-AN1 type zinc finger protein","termid":"PBO:0003149"}


id: PBO:0027497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_FR901464","termid":"PBO:0027497"}


id: SO:0000671
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence eliminated from the genome of ciliates during nuclear differentiation.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_rearrangement_feature","termid":"SO:0000669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_eliminated_sequence","synonyms":[{"name":"internal eliminated sequence","type":"exact"}],"termid":"SO:0000671"}


id: PATO:0000875
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000875 irritable (obsolete PATO:0000875)","termid":"PATO:0000875"}


id: GO:0009030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thiamine phosphate = ADP + H+ + thiamine diphosphate.","definition_xrefs":["RHEA:15913","EC:2.7.4.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"thiamine-phosphate kinase activity","secondary_identifiers":["KEGG_REACTION:R00617","MetaCyc:THI-P-KIN-RXN"],"synonyms":[{"name":"ATP:thiamine-phosphate phosphotransferase activity","type":"related"},{"name":"thiamin monophosphatase activity","type":"related"},{"name":"thiamin monophosphokinase activity","type":"related"},{"name":"thiamin phosphate kinase activity","type":"exact"},{"name":"thiamin-monophosphate kinase activity","type":"related"},{"name":"thiamin-phosphate kinase activity","type":"exact"},{"name":"thiamine-monophosphate kinase activity","type":"related"}],"termid":"GO:0009030"}


id: PBO:0027934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_in_stationary_phase","termid":"PBO:0027934"}


id: GO:0006775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"fat-soluble vitamin metabolic process","synonyms":[{"name":"fat-soluble vitamin metabolism","type":"exact"}],"termid":"GO:0006775"}


id: PBO:0078881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 4","termid":"PBO:0078881"}


id: PBO:0059067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB4 pseudogene 2","termid":"PBO:0059067"}


id: GO:0036485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of trunk neural crest cells from the neural tube, travelling dorso-laterally into the ectoderm and continuing toward the ventral midline of the belly. These migrating trunk neural crest cells become melanocytes, the melanin-forming pigment cells.","definition_xrefs":["GOC:mat","GOC:PARL","GOC:bf","PMID:2387238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trunk neural crest cell migration","termid":"GO:0036484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsolateral trunk neural crest cell migration","synonyms":[{"name":"dorsolateral trunk NCC migration","type":"exact"}],"termid":"GO:0036485"}


id: PBO:0058380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4752","termid":"PBO:0058380"}


id: PBO:0076206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 16","termid":"PBO:0076206"}


id: PBO:0053594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 621","termid":"PBO:0053594"}


id: PR:Q9USQ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC577.11 gene.","definition_xrefs":["UniProtKB:Q9USQ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C577.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.11","synonyms":[{"name":"Spom972h-SPBC577.11","type":"exact"}],"termid":"PR:Q9USQ8"}


id: GO:0046058
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"cyclic purine nucleotide metabolic process","termid":"GO:0052652"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"cAMP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3',5' cAMP metabolic process","type":"exact"},{"name":"3',5' cAMP metabolism","type":"exact"},{"name":"3',5'-cAMP metabolic process","type":"exact"},{"name":"3',5'-cAMP metabolism","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate metabolic process","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate metabolism","type":"exact"},{"name":"cAMP generating peptide activity","type":"related"},{"name":"cAMP metabolism","type":"exact"},{"name":"cyclic AMP metabolic process","type":"exact"},{"name":"cyclic AMP metabolism","type":"exact"}],"termid":"GO:0046058","terms_by_termid":{"GO:0006198":null}}


id: PBO:0066269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member C","termid":"PBO:0066269"}


id: PBO:0066176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB transcriptional corepressor like 2","termid":"PBO:0066176"}


id: FYPO:0007226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at one or more heterochromatin islands is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal chromatin silencing at heterochromatin island","synonyms":[{"name":"normal chromatin silencing at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0007226"}


id: GO:0090253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the wing epithelium narrows along one axis and lengthens in a perpendicular axis that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090253"}


id: PBO:0064401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase","termid":"PBO:0064401"}


id: PBO:0068605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 56, pseudogene","termid":"PBO:0068605"}


id: RO:0002572
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"s is luminal space of x iff s is lumen_of x and s is an immaterial entity","direct_ancestors":[{"relation_name":"is_a","term_name":"lumen_of","termid":"RO:0002571"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"luminal_space_of","termid":"RO:0002572"}


id: GO:0007342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a sperm, with the plasma membrane of the oocyte as part of the process of single fertilization. In sperm with flagella, binding occurs at the posterior (post-acrosomal) region of the sperm head.","definition_xrefs":["GOC:jl","PMID:17644969","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"plasma membrane fusion","termid":"GO:0045026"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"fusion of sperm to egg plasma membrane involved in single fertilization","synonyms":[{"name":"sperm-oocyte fusion","type":"narrow"}],"termid":"GO:0007342"}


id: PBO:0074191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 1","termid":"PBO:0074191"}


id: FYPO:0006348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mechlorethamine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on mechlorethamine","synonyms":[{"name":"normal cell population growth in presence of mechlorethamine","type":"exact"},{"name":"normal cell population growth on mechlorethamine","type":"exact"},{"name":"normal growth on 2-chloro-N-(2-chloroethyl)-N-methylethanamine","type":"exact"},{"name":"normal growth on HN2","type":"exact"},{"name":"normal growth on bis(2-chloroethyl)methylamine","type":"exact"},{"name":"normal vegetative cell population growth on mechlorethamine","type":"exact"}],"termid":"FYPO:0006348"}


id: FYPO:0000796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glycerol dehydrogenase activity","termid":"FYPO:0000793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased glycerol dehydrogenase activity","termid":"FYPO:0000796"}


id: PBO:0046729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"envoplakin like","termid":"PBO:0046729"}


id: PBO:0002637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation release factor eRF1","termid":"PBO:0002637"}


id: GO:0016476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the surface configuration of an embryonic cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic cell shape","synonyms":[{"name":"shape changes of embryonic cells","type":"related"}],"termid":"GO:0016476"}


id: SO:0001493
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A centromere DNA Element I (CDEI) is a conserved region, part of the centromere, consisting of a consensus region composed of 8-11bp which enables binding by the centromere binding factor 1(Cbf1p).","definition_xrefs":["PMID:11222754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"point_centromere","termid":"SO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere_DNA_Element_I","synonyms":[{"name":"CDEI","type":"exact"},{"name":"Centromere DNA Element I","type":"exact"}],"termid":"SO:0001493"}


id: GO:0004964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with luteinizing hormone (also called lutropin) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732","PMID:1922095","PMID:18848524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"luteinizing hormone receptor activity","secondary_identifiers":["GO:0004976"],"synonyms":[{"name":"LH receptor","type":"exact"},{"name":"LHR","type":"exact"},{"name":"lutropin receptor","type":"exact"},{"name":"lutropin-choriogonadotropic hormone receptor","type":"related"}],"termid":"GO:0004964"}


id: GO:0043906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ala-tRNA(Pro).","definition_xrefs":["PMID:14663147","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140098","GO:0140101","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"Ala-tRNA(Pro) hydrolase activity","synonyms":[{"name":"Ala-tRNAPro hydrolase activity","type":"exact"}],"termid":"GO:0043906"}


id: PBO:0043277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 3 member B","termid":"PBO:0043277"}


id: SO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence is representative of a class of similar sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar","termid":"SO:0000864"}


id: PBO:0066192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM12B antisense RNA 1","termid":"PBO:0066192"}


id: PBO:0087421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 9 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; required for electron transfer at the ubiquinol oxidase site of the complex","termid":"PBO:0087421"}


id: PBO:0082111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetolactate synthase; catalyses the first common step in isoleucine and valine biosynthesis and is the target of several classes of inhibitors, localizes to the mitochondria; expression of the gene is under general amino acid control","termid":"PBO:0082111"}


id: PBO:0078306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-11","termid":"PBO:0078306"}


id: PBO:0069741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1022, pseudogene","termid":"PBO:0069741"}


id: PR:P87146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim22 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14110:SF0","PRO:DNx","OMA:SCHPO03639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.04c","secondary_identifiers":["UniProtKB:P87146"],"synonyms":[{"name":"Spom972h-TIMM22","type":"exact"}],"termid":"PR:P87146"}


id: PBO:0071354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 13","termid":"PBO:0071354"}


id: PBO:0054826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2239","termid":"PBO:0054826"}


id: PBO:0035728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_subtelomeric_heterochromatin_during_vegetative_growth","termid":"PBO:0035728"}


id: PBO:0069294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 550, pseudogene","termid":"PBO:0069294"}


id: PBO:0086212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds Sin3p in a two-hybrid assay; STB6 has a paralog, STB2, that arose from the whole genome duplication","termid":"PBO:0086212"}


id: PR:G2TRU6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC188.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C188.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.14","synonyms":[{"name":"Spom972h-SPCC188.14","type":"exact"}],"termid":"PR:G2TRU6"}


id: _global:enables_subfunction
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Holds between an entity and an process P where the entity enables some larger compound process, and that larger process has-part P.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enables_subfunction","secondary_identifiers":["RO:0004031"],"termid":"_global:enables_subfunction"}


id: GO:0018868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-aminobenzenesulfonate, aniline-o-sulfonic acid, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines.","definition_xrefs":["UM-BBD_pathwayID:abs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"2-aminobenzenesulfonate metabolic process","synonyms":[{"name":"2-aminobenzenesulfonate metabolism","type":"exact"},{"name":"2-aminobenzenesulphonate metabolic process","type":"exact"},{"name":"2-aminobenzenesulphonate metabolism","type":"exact"}],"termid":"GO:0018868"}


id: PBO:0051480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (V)-66 (pseudogene)","termid":"PBO:0051480"}


id: FYPO:0005997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any small nuclear RNA (snRNA) primary transcript, snRNA precursor or processing intermediate, or mature snRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered snRNA or precursor level","synonyms":[{"name":"abnormal snRNA or precursor level","type":"exact"},{"name":"altered snRNA or precursor accumulation","type":"related"},{"name":"altered snRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered snRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered snRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005997"}


id: GO:0018138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl serine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0242"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-serine thiazolecarboxylic acid (obsolete GO:0018138)","termid":"GO:0018138"}


id: GO:0015900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of benomyl into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Benomyl, methyl 1-(butylcarbamoyl)-2-benzimidazolecarbamate, is a systemic agricultural fungicide used for control of certain fungal diseases of stone fruit.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benomyl transport (obsolete GO:0015900)","termid":"GO:0015900"}


id: PBO:0059046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylmalonyl-CoA mutase","termid":"PBO:0059046"}


id: PBO:0077382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 123","termid":"PBO:0077382"}


id: GO:1905013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 'de novo' NAD biosynthetic process from tryptophan.","definition_xrefs":["PMID:12140278","GOC:TermGenie","PMID:19843166","GOC:bf","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"negative regulation of NAD metabolic process","termid":"GO:1902689"},{"relation_name":"is_a","term_name":"regulation of 'de novo' NAD biosynthetic process from tryptophan","termid":"GO:1905012"},{"relation_name":"negatively_regulates","term_name":"'de novo' NAD biosynthetic process from tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"negative regulation of 'de novo' NAD biosynthetic process from tryptophan","synonyms":[{"name":"down regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"down regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"down-regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"down-regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"downregulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"downregulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"inhibition of 'de novo' NAD biosynthetic process from tryptophan","type":"narrow"},{"name":"inhibition of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"negative regulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905013"}


id: GO:0050520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-diacylglycerol + choline = 1,2-diacyl-sn-glycero-3-phosphocholine + CMP + H+.","definition_xrefs":["EC:2.7.8.24","RHEA:14597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"phosphatidylcholine synthase activity","secondary_identifiers":["MetaCyc:2.7.8.24-RXN","KEGG_REACTION:R05794"],"synonyms":[{"name":"CDP-diacylglycerol:choline O-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diglyceride-choline O-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiglyceride-choline O-phosphatidyltransferase activity","type":"related"},{"name":"PC synthase activity","type":"related"}],"termid":"GO:0050520"}


id: GO:0043493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of a large and small subunit which catalyze the packaging of DNA into viral heads. Note that not all viral terminases have this structure, some exist as single polypeptides.","definition_xrefs":["GOC:bf","GOC:mlg","GOC:jl","GOC:bm","PMID:18687036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral terminase complex","synonyms":[{"name":"phage terminase complex","type":"narrow"},{"name":"virus terminase complex","type":"exact"}],"termid":"GO:0043493"}


id: RO:0002593
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence starts at point y if and only if the time point at which x starts is equivalent to the time point at which y ends.","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_at_point","termid":"RO:0002593"}


id: PBO:0081171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 9 pseudogene 1","termid":"PBO:0081171"}


id: SO:0001088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The covalent bond between sulfur atoms that binds two peptide chains or different parts of one peptide chain and is a structural determinant in many protein molecules.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001088 disulfide_bond (obsolete SO:0001088)","synonyms":[{"name":"disulfid","type":"related"},{"name":"disulfide","type":"related"},{"name":"disulfide bond","type":"related"},{"name":"disulphide","type":"exact"},{"name":"disulphide bond","type":"related"}],"termid":"SO:0001088"}


id: PBO:0084476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone alpha-factor, made by alpha cells; interacts with mating type a cells to induce cell cycle arrest and other responses leading to mating; also encoded by MF(ALPHA)1, which is more highly expressed; binds copper(II) ions","termid":"PBO:0084476"}


id: GO:0034633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of retinol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Retinol is vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:mah","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"retinol transport","synonyms":[{"name":"vitamin A1 transport","type":"exact"}],"termid":"GO:0034633"}


id: PBO:0028159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5.8S_rRNA_level","termid":"PBO:0028159"}


id: GO:0018327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-histidine to form 1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine).","definition_xrefs":["RESID:AA0035"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 1'-phospho-L-histidine (obsolete GO:0018327)","termid":"GO:0018327"}


id: GO:0010209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vacuolar sorting signal, a specific peptide sequence that acts as a signal to localize the protein within the vacuole.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005048"],"is_obsolete":false,"name":"vacuolar sorting signal binding","termid":"GO:0010209"}


id: GO:0050638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + taxa-4(20),11-dien-5alpha-ol = CoA + taxa-4(20),11-dien-5alpha-yl acetate.","definition_xrefs":["RHEA:22028","EC:2.3.1.162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"taxadien-5-alpha-ol O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06307","MetaCyc:2.3.1.162-RXN"],"synonyms":[{"name":"acetyl coenzyme A: taxa-4(20),11(12)-dien-5alpha-ol O-acetyl transferase activity","type":"related"},{"name":"acetyl coenzyme A:taxa-4(20),11(12)-dien-5-alpha-ol O-acetyl transferase activity","type":"related"},{"name":"acetyl-CoA:taxa-4(20),11-dien-5alpha-ol O-acetyltransferase activity","type":"related"},{"name":"taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase activity","type":"related"},{"name":"taxadien-5a-ol O-acetyltransferase activity","type":"exact"},{"name":"taxadien-5alpha-ol O-acetyltransferase activity","type":"related"},{"name":"taxadienol acetyltransferase activity","type":"related"}],"termid":"GO:0050638"}


id: PR:Q10163
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- smb1 gene.","definition_xrefs":["UniProtKB:Q10163","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein-associated protein B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.08","synonyms":[{"name":"Sm protein B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Sm-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SmB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-smb1","type":"exact"},{"name":"snRNP-B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10163"}


id: GO:1900529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of cell shape that is involved in cellular response to glucose starvation.","definition_xrefs":["GOC:TermGenie","PMID:9135147","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape involved in cellular response to glucose starvation (obsolete GO:1900529)","synonyms":[{"name":"regulation of cell shape involved in cellular response to glucose starvation","type":"exact"}],"termid":"GO:1900529"}


id: PR:O74915
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C757.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.04","synonyms":[{"name":"Spom972h-SPCC757.04","type":"exact"}],"termid":"PR:O74915"}


id: PBO:0090432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH kinase Pos5","termid":"PBO:0090432"}


id: PBO:0078398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 8-1","termid":"PBO:0078398"}


id: PBO:0067684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 1","termid":"PBO:0067684"}


id: FYPO:0007206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic rDNA repeat spacer does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at rDNA repeats","termid":"FYPO:0003089"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished replication fork arrest at rDNA repeats","synonyms":[{"name":"abolished replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"abolished replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"abolished replication fork arrest at ribosomal DNA repeats","type":"exact"},{"name":"replication fork arrest at rDNA repeats abolished","type":"exact"}],"termid":"FYPO:0007206"}


id: PBO:0053312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA, p53 induced transcript","termid":"PBO:0053312"}


id: PBO:0064451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POF1B actin binding protein","termid":"PBO:0064451"}


id: PBO:0065043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 2","termid":"PBO:0065043"}


id: GO:0099529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Neurotransmitter receptor activity occurring in the postsynaptic membrane that is involved in regulating postsynaptic membrane potential, either directly (ionotropic receptors) or indirectly (e.g. via GPCR activation of an ion channel).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099529"}


id: GO:0042898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fosmidomycin, a phosphonic acid derivative with potent activity against Gram-negative organisms, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","PMID:12543685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"fosmidomycin transmembrane transporter activity","synonyms":[{"name":"fosmidomycin transporter activity","type":"related"}],"termid":"GO:0042898"}


id: GO:0072338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lactam metabolic process","synonyms":[{"name":"cellular lactam metabolic process","type":"exact"},{"name":"cellular lactam metabolism","type":"exact"}],"termid":"GO:0072338"}


id: PBO:0030385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cortex_morphology_during_nitrogen_starvation","termid":"PBO:0030385"}


id: GO:0061462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a lysosome.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to vacuole","termid":"GO:0072665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to lysosome","termid":"GO:0061462"}


id: PATO:0000507
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000507 disease sensitivity value (obsolete PATO:0000507)","termid":"PATO:0000507"}


id: PR:Q9Y811
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pth3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized peptide chain release factor-like protein C1105.18c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.18c","synonyms":[{"name":"Spom972h-pth3","type":"exact"}],"termid":"PR:Q9Y811"}


id: PBO:0052063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 5","termid":"PBO:0052063"}


id: PBO:0092025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S3","termid":"PBO:0092025"}


id: GO:0061438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renal system vasculature is generated and organized. Morphogenesis pertains to the creation of form.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:11891195","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"renal system vasculature development","termid":"GO:0061437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature morphogenesis","termid":"GO:0061438"}


id: PBO:0034028
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_curator_role","termid":"PBO:0034028"}


id: PBO:0078601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 14","termid":"PBO:0078601"}


id: FYPO:0001401
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[115513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003946"}],"single_locus_phenotype":[{"annotations":[115535,115536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115506,115518,115507,115514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_02392","SJAG_01143"],"name":"abnormal protein localization to cell division site","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta"],"synonyms":[{"name":"abnormal protein localisation to cell division site","type":"exact"},{"name":"abnormal protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0001401","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0003946":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: PBO:0036464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, possibly DNA damage related nuclease (predicted)","termid":"PBO:0036464"}


id: GO:1904645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a amyloid-beta stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23555824","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amyloid-beta","synonyms":[{"name":"response to beta-amyloid","type":"exact"},{"name":"response to beta-amyloids","type":"related"}],"termid":"GO:1904645"}


id: PBO:0028761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-post-anaphase_array_absent_from_cell","termid":"PBO:0028761"}


id: PBO:0060068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 15","termid":"PBO:0060068"}


id: PBO:0066222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 26","termid":"PBO:0066222"}


id: PBO:0075839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 homolog, RNA polymerase II CTD phosphatase","termid":"PBO:0075839"}


id: GO:0085000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type V secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type V secretion system (obsolete GO:0085000)","termid":"GO:0085000"}


id: PR:G2TRN5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.20 gene.","definition_xrefs":["UniProtKB:G2TRN5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C25B8.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.20","synonyms":[{"name":"Spom972h-SPAC25B8.20","type":"exact"}],"termid":"PR:G2TRN5"}


id: PBO:0048190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type B receptor subunit 2","termid":"PBO:0048190"}


id: PBO:0071891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 29","termid":"PBO:0071891"}


id: FYPO:0005458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell during a cellular response to non-ionic osmotic stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular glycerol level during cellular response to osmotic stress","termid":"FYPO:0005457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular glycerol level during cellular response to non-ionic osmotic stress","synonyms":[{"name":"decreased cellular glycerol level during cellular response to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular glycerol level during cellular response to non-ionic osmotic stress during vegetative growth","type":"exact"},{"name":"decreased cellular glycerol level during cellular response to sorbitol","type":"related"},{"name":"decreased glycerol accumulation during cellular response to non-ionic osmotic stress","type":"related"},{"name":"reduced cellular glycerol level during cellular response to non-ionic osmotic stress","type":"exact"}],"termid":"FYPO:0005458"}


id: PBO:0073264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 8","termid":"PBO:0073264"}


id: PBO:0027675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_metaphase_with_abnormal_spindle","termid":"PBO:0027675"}


id: PBO:0065447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 4","termid":"PBO:0065447"}


id: PBO:0064744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 80","termid":"PBO:0064744"}


id: PBO:0074357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 4","termid":"PBO:0074357"}


id: PBO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates sdh41","termid":"PBO:0001370"}


id: PBO:0051708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase K","termid":"PBO:0051708"}


id: PBO:0090350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2","termid":"PBO:0090350"}


id: PBO:0075270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 23","termid":"PBO:0075270"}


id: GO:0010845
data:
  {"annotated_genes":["SJAG_00266","SJAG_03438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85223],"is_not":false,"summary":null,"term":"GO:0010845"},{"annotations":[104094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reciprocal meiotic recombination","termid":"GO:0010520"},{"relation_name":"is_a","term_name":"positive regulation of meiotic nuclear division","termid":"GO:0045836"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"positively_regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_03438":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0007049","GO:0140013","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of meiotic recombination","type":"related"}],"termid":"GO:0010845","terms_by_termid":{"GO:0010845":null,"GO:0010846":null}}


id: GO:0033131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of hexokinase activity","termid":"GO:1903299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of glucokinase activity","synonyms":[{"name":"glucokinase regulator","type":"narrow"}],"termid":"GO:0033131"}


id: GO:0061172
data:
  {"annotated_genes":["SJAG_00845","SJAG_04522","SJAG_01373","SJAG_00317"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[108606,99839,103740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of bipolar cell polarity. Bipolar organization is the organization that is a mirror image along an axis from a plane.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity","termid":"GO:2000114"},{"relation_name":"regulates","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00317":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061172","terms_by_termid":{"GO:0061173":null,"GO:1904846":null}}


id: GO:0004135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the (1->6) glycosidic linkages present.","definition_xrefs":["EC:3.2.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"amylo-alpha-1,6-glucosidase activity","secondary_identifiers":["Reactome:R-HSA-71593","MetaCyc:3.2.1.33-RXN"],"synonyms":[{"name":"amylo-1,6-glucosidase activity","type":"exact"},{"name":"amylopectin 1,6-glucosidase activity","type":"related"},{"name":"dextrin 6-alpha-D-glucosidase activity","type":"related"},{"name":"dextrin-1,6-glucosidase activity","type":"related"},{"name":"glycogen phosphorylase-limit dextrin alpha-1,6-glucohydrolase activity","type":"related"}],"termid":"GO:0004135"}


id: GO:0009898
data:
  {"annotated_genes":["SJAG_00368","SJAG_05207","SJAG_04666","SJAG_02392","SJAG_01114","SJAG_01242","SJAG_01738","SJAG_04509","SJAG_01774","SJAG_02605","SJAG_02444","SJAG_02233","SJAG_04077","SJAG_04026","SJAG_03081","SJAG_03596"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84054,84124,85883,88539,88704,98558,99862,102709,103163,106991],"is_not":false,"summary":null,"term":"GO:0009898"},{"annotations":[91982,102710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[106669],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[90363,102609,103257,105141],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The leaflet the plasma membrane that faces the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_01114":null,"SJAG_01242":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_02444":null,"SJAG_02605":null,"SJAG_03081":null,"SJAG_03596":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cytoplasmic side of plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"internal leaflet of plasma membrane","type":"exact"},{"name":"internal side of plasma membrane","type":"exact"},{"name":"juxtamembrane","type":"broad"}],"termid":"GO:0009898","terms_by_termid":{"GO:0005834":null,"GO:0009898":null,"GO:0031234":null,"GO:0106186":null}}


id: PBO:0002989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transporter Cat1","termid":"PBO:0002989"}


id: FYPO:0005490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to vacuole","synonyms":[{"name":"abnormal protein localisation to vacuole","type":"exact"},{"name":"abnormal protein localization in vacuole","type":"exact"},{"name":"abnormal protein localization to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0005490"}


id: GO:0070276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any halogen, elements of Group VII; includes metabolism of halogen-containing compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"halogen metabolic process","synonyms":[{"name":"halogen metabolism","type":"exact"}],"termid":"GO:0070276"}


id: GO:0035818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the amount of urine excreted over a unit of time, as a result of pressure natriuresis.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pressure natriuresis","termid":"GO:0003095"},{"relation_name":"is_a","term_name":"positive regulation of urine volume","termid":"GO:0035810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urine volume by pressure natriuresis","synonyms":[{"name":"diuresis resulting from pressure natriuresis","type":"related"}],"termid":"GO:0035818"}


id: PBO:0031000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_degradation_during_vegetative_growth","termid":"PBO:0031000"}


id: PBO:0087107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein P1 beta; component of the ribosomal stalk, which is involved in interaction of translational elongation factors with ribosome; free (non-ribosomal) P1 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; accumulation is regulated by phosphorylation and interaction with the P2 stalk component","termid":"PBO:0087107"}


id: PBO:0089948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA repair protein","termid":"PBO:0089948"}


id: PBO:0090335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' DNA helicase Pif1/Pfh1","termid":"PBO:0090335"}


id: PBO:0076434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 10","termid":"PBO:0076434"}


id: PBO:0059191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRGPRF antisense RNA 1","termid":"PBO:0059191"}


id: GO:0032866
data:
  {"annotated_genes":["SJAG_03958","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91896,97314],"is_not":false,"summary":null,"term":"GO:0032866"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylitol + NADP+ = D-xylose + NADPH + H+.","definition_xrefs":["PMID:12724380","PMID:15184173","RHEA:27445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldose reductase (NADPH) activity","termid":"GO:0004032"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-xylose reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-8773"],"synonyms":[{"name":"D-xylose reductase activity","type":"broad"},{"name":"D-xylose:NADP reductase activity","type":"exact"},{"name":"xylose reductase activity","type":"broad"}],"termid":"GO:0032866","terms_by_termid":{"GO:0032866":null}}


id: PBO:0003117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-uridine preferring nucleoside hydrolase (predicted)","termid":"PBO:0003117"}


id: GO:0009324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses D-amino-acid dehydrogenase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"D-amino-acid dehydrogenase complex","termid":"GO:0009324"}


id: PBO:0051473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-59 (pseudogene)","termid":"PBO:0051473"}


id: PBO:0031680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_in_response_to_pheromone","termid":"PBO:0031680"}


id: PBO:0000160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD binding oxidoreductase (predicted)","termid":"PBO:0000160"}


id: PBO:0064156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IB","termid":"PBO:0064156"}


id: PR:O59735
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ceramide synthase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase lac1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.15c","secondary_identifiers":["UniProtKB:O59735"],"synonyms":[{"name":"SPBC3E7.15c","type":"related"},{"name":"Spom972h-CERS2","type":"exact"},{"name":"meiotically up-regulated gene 83 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mug83","type":"related"}],"termid":"PR:O59735"}


id: GO:0072078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a nephron tubule are generated and organized. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubule morphogenesis","termid":"GO:0061333"},{"relation_name":"is_a","term_name":"nephron epithelium morphogenesis","termid":"GO:0072088"},{"relation_name":"part_of","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron tubule morphogenesis","termid":"GO:0072078"}


id: FYPO:0004064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of RNA from one or more DNA templates is abnormal.","definition_xrefs":["GO:0006351","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype during vegetative growth","termid":"FYPO:0000290"},{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal transcription during vegetative growth","synonyms":[{"name":"abnormal DNA-dependent transcription during vegetative growth","type":"exact"},{"name":"abnormal transcription during mitotic cell cycle","type":"related"},{"name":"abnormal transcription, DNA-templated, during vegetative growth","type":"exact"}],"termid":"FYPO:0004064"}


id: PBO:0053873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1149","termid":"PBO:0053873"}


id: PBO:0029725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis,_with_abnormal_nuclear_division","termid":"PBO:0029725"}


id: FYPO:0008036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at the CENP-A boundary. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:36200823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nucleosome occupancy","termid":"FYPO:0007655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"increased nucleosome occupancy at CENP-A boundary","termid":"FYPO:0008036"}


id: PBO:0003536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotate phosphoribosyltransferase Ura5","termid":"PBO:0003536"}


id: PBO:0051864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly enzyme pseudogene 1","termid":"PBO:0051864"}


id: PBO:0052031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jrk helix-turn-helix protein","termid":"PBO:0052031"}


id: PBO:0109398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 25, pseudogene","termid":"PBO:0109398"}


id: PBO:0089541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S16","termid":"PBO:0089541"}


id: PBO:0028572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase_without_septation","termid":"PBO:0028572"}


id: PBO:0034071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_apparent_orthology_relationship_with","termid":"PBO:0034071"}


id: PBO:0035892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_neddylation","termid":"PBO:0035892"}


id: PBO:0040478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 1 like","termid":"PBO:0040478"}


id: PBO:0051127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR21-1 (non-functional)","termid":"PBO:0051127"}


id: FYPO:0003694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 18S ribosomal RNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature rRNA level","termid":"FYPO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased mature 18S rRNA level","synonyms":[{"name":"decreased 18S rRNA level","type":"broad"},{"name":"decreased mature 18S rRNA accumulation","type":"related"},{"name":"decreased mature 18S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature 18S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 18S rRNA transcript level","type":"exact"},{"name":"reduced mature 18S rRNA level","type":"exact"}],"termid":"FYPO:0003694"}


id: PR:O60149
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps38 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.19","synonyms":[{"name":"Spom972h-vps38","type":"exact"}],"termid":"PR:O60149"}


id: PBO:0060419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylated alpha-linked acidic dipeptidase 2","termid":"PBO:0060419"}


id: GO:0098721
data:
  {"annotated_genes":["SJAG_04714","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84617,91681],"is_not":false,"summary":null,"term":"GO:0098721"},{"annotations":[84262],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"The directed movement of uracil from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"uracil transmembrane transport","termid":"GO:1903791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"uracil import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902431"],"synonyms":[{"name":"uracil import into cell","type":"exact"}],"termid":"GO:0098721","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: GO:0060639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that induces the formation of the salivary gland field by means of the secretion of a signal by a mesenchymal cell and its reception and interpretation by an epithelial cell resulting in it adopting the identity of a salivary gland bud cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"positively_regulates","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of salivary gland formation by mesenchymal-epithelial signaling","synonyms":[{"name":"positive regulation of salivary gland formation by mesenchymal-epithelial signalling","type":"exact"}],"termid":"GO:0060639"}


id: PBO:0042678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein alpha","termid":"PBO:0042678"}


id: GO:0016627
data:
  {"annotated_genes":["SJAG_01786","SJAG_00197","SJAG_01671","SJAG_02717","SJAG_01362","SJAG_04107","SJAG_03240","SJAG_02291","SJAG_00260","SJAG_02007","SJAG_03236","SJAG_02151","SJAG_03024","SJAG_04944","SJAG_04810","SJAG_04954","SJAG_00203","SJAG_00174","SJAG_02876","SJAG_01041","SJAG_04652"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96142,96797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003865"},{"annotations":[88975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004109"},{"annotations":[100587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050613"},{"annotations":[88672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000246"},{"annotations":[94639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"},{"annotations":[94640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004152"},{"annotations":[96878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004318"},{"annotations":[91150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141148"},{"annotations":[86324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016156"},{"annotations":[85613,100813,105768,114527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106414"},{"annotations":[97718,97717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016628"},{"annotations":[88474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004729"},{"annotations":[96143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102389"},{"annotations":[93943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043115"},{"annotations":[110937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008977"},{"annotations":[110938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004665"},{"annotations":[84988,85345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"},{"annotations":[107451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019166"},{"annotations":[105769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102262"},{"annotations":[105770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102263"},{"annotations":[100814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102264"},{"annotations":[114528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102266"},{"annotations":[114529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102267"},{"annotations":[85614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_00197":null,"SJAG_00203":null,"SJAG_00260":null,"SJAG_01041":null,"SJAG_01362":null,"SJAG_01671":null,"SJAG_01786":null,"SJAG_02007":null,"SJAG_02151":null,"SJAG_02291":null,"SJAG_02717":null,"SJAG_02876":null,"SJAG_03024":null,"SJAG_03236":null,"SJAG_03240":null,"SJAG_04107":null,"SJAG_04652":null,"SJAG_04810":null,"SJAG_04944":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2995334","Reactome:R-HSA-9661710"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-CH group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016627","terms_by_termid":{"GO:0000246":null,"GO:0003865":null,"GO:0004109":null,"GO:0004152":null,"GO:0004318":null,"GO:0004665":null,"GO:0004729":null,"GO:0008177":null,"GO:0008977":null,"GO:0016156":null,"GO:0016628":null,"GO:0019166":null,"GO:0043115":null,"GO:0050613":null,"GO:0102262":null,"GO:0102263":null,"GO:0102264":null,"GO:0102265":null,"GO:0102266":null,"GO:0102267":null,"GO:0102389":null,"GO:0106414":null,"GO:0106430":null,"GO:0141148":null}}


id: PBO:0054946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2360","termid":"PBO:0054946"}


id: GO:0015475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of adhesin from the periplasm to the external milieu; the adhesin and the porin are the N- and C-terminal regions of the same protein, respectively.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autotransporter activity","termid":"GO:0015474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"adhesin autotransporter activity","termid":"GO:0015475"}


id: PBO:0091424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class II alpha-mannosidase, subtype C, Ams1","termid":"PBO:0091424"}


id: PBO:0058364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4736","termid":"PBO:0058364"}


id: SO:0000332
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Coding region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_conserved_region","synonyms":[{"name":"coding conserved region","type":"exact"}],"termid":"SO:0000332"}


id: GO:0102893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + betanidin = H+ + gomphrenin I + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"betanidin 6-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8480"],"termid":"GO:0102893"}


