# terms

id: GO:0032404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mismatch repair complex binding","termid":"GO:0032404"}


id: GO:1903216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein processing involved in protein targeting to mitochondrion.","definition_xrefs":["GOC:PARL","PMID:21370995","GOC:bf","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"protein processing involved in protein targeting to mitochondrion","termid":"GO:0006627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"regulation of protein processing involved in protein targeting to mitochondrion","synonyms":[{"name":"regulation of mitochondrial processing","type":"broad"},{"name":"regulation of mitochondrial protein processing during import","type":"related"}],"termid":"GO:1903216"}


id: GO:0010239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps involved in processing precursor RNAs arising from transcription of operons in the chloroplast genome into mature mRNAs.","definition_xrefs":["GOC:tb","PMID:9648738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"},{"relation_name":"is_a","term_name":"chloroplast RNA processing","termid":"GO:0031425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chloroplast mRNA processing","termid":"GO:0010239"}


id: PBO:0046951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 74 member A6","termid":"PBO:0046951"}


id: SO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operon whose transcription is coordinated on several mutually overlapping transcription units transcribed in the same direction and sharing at least one gene.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"operon","termid":"SO:0000178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_operon","synonyms":[{"name":"complex operon","type":"exact"}],"termid":"SO:0002299"}


id: GO:0006196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of AMP, adenosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate catabolic process","termid":"GO:0009169"},{"relation_name":"is_a","term_name":"AMP metabolic process","termid":"GO:0046033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"AMP catabolic process","synonyms":[{"name":"AMP breakdown","type":"exact"},{"name":"AMP catabolism","type":"exact"},{"name":"AMP degradation","type":"exact"}],"termid":"GO:0006196"}


id: PBO:0067407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 517, pseudogene","termid":"PBO:0067407"}


id: PBO:0005326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit Cgi121 (predicted)","termid":"PBO:0005326"}


id: PBO:0073686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signaling threshold regulating transmembrane adaptor 1","termid":"PBO:0073686"}


id: GO:0102297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: selenic acid + ATP + 2 H+ = adenylyl selenate + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:2.7.7.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"selenate adenylyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12720"],"termid":"GO:0102297"}


id: PBO:0065794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3HDM2 divergent transcript","termid":"PBO:0065794"}


id: PBO:0040396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E2","termid":"PBO:0040396"}


id: PBO:0083194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene GAS1/YMR307W","termid":"PBO:0083194"}


id: PBO:0015237
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAM1","termid":"PBO:0015237"}


id: PBO:0069915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1207, pseudogene","termid":"PBO:0069915"}


id: GO:0060415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of muscle tissue are generated and organized. Muscle tissue consists of a set of cells that are part of an organ and carry out a contractive function.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"muscle organ morphogenesis","termid":"GO:0048644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle tissue morphogenesis","termid":"GO:0060415"}


id: PBO:0111872
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein","termid":"PBO:0111872"}


id: PATO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wholeness quality inhering in a bearer by virtue of the bearer's lacks enough functionality.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sufficiency","termid":"PATO:0001626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insufficient","synonyms":[{"name":"inadequate ","type":"related"}],"termid":"PATO:0001628"}


id: GO:0070916
data:
  {"annotated_genes":["SJAG_03015","SJAG_00506"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91280,93643],"is_not":false,"summary":null,"term":"GO:0070916"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses inositol phosphoceramide synthase activity and contains a catalytic subunit and a regulatory subunit (Aur1p and Kei1p, respectively, in Saccharomyces).","definition_xrefs":["PMID:19726565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00506":null,"SJAG_03015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"inositol phosphoceramide synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IPC synthase complex","type":"exact"}],"termid":"GO:0070916","terms_by_termid":{"GO:0070916":null}}


id: RO:0002637
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of mesoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_mesoparasite","termid":"RO:0002637"}


id: PBO:0084480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maturase-like protein","termid":"PBO:0084480"}


id: PATO:0000905
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000905 f1 fertile (obsolete PATO:0000905)","termid":"PATO:0000905"}


id: PBO:0013064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ergothioneine biosynthesis protein Egt2","termid":"PBO:0013064"}


id: PBO:0005732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L22 (predicted)","termid":"PBO:0005732"}


id: PBO:0069597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 874, pseudogene","termid":"PBO:0069597"}


id: PBO:0055099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2517","termid":"PBO:0055099"}


id: PBO:0072536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 66","termid":"PBO:0072536"}


id: GO:0003173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventriculo bulbo valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventriculo bulbo valve development","termid":"GO:0003173"}


id: PBO:0082573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase I; requires activation from zymogenic form in order to catalyze the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for repairing the chitin septum during cytokinesis; transcription activated by mating factor","termid":"PBO:0082573"}


id: PBO:0044378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily A member 2","termid":"PBO:0044378"}


id: GO:0106160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of small RNA loading onto RISC.","definition_xrefs":["PMID:29775584","GOC:ha"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of small RNA loading onto RISC (obsolete GO:0106160)","termid":"GO:0106160"}


id: PR:Q9UT09
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP8A3.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT09"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.07c","synonyms":[{"name":"3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAHP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAP8A3.07c","type":"exact"},{"name":"phospho-2-keto-3-deoxyheptonate aldolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT09"}


id: PBO:0046198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A3 family member B, pseudogene","termid":"PBO:0046198"}


id: PR:O13974
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin thioesterase OTU1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13312:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin thioesterase otu1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.14","secondary_identifiers":["UniProtKB:O13974"],"synonyms":[{"name":"OTU domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC24C9.14","type":"related"},{"name":"Spom972h-YOD1","type":"exact"},{"name":"meiotically up-regulated gene 141 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mug141","type":"related"}],"termid":"PR:O13974"}


id: PBO:0059419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 5","termid":"PBO:0059419"}


id: PBO:0039122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allograft inflammatory factor 1 like","termid":"PBO:0039122"}


id: GO:0043733
data:
  {"annotated_genes":["SJAG_01971","SJAG_05257"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97711,73611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008725"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 3-methylbase + H2O = DNA with abasic site + 3-methylbase. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methylpurine or 3-methylpyrimidine base and the deoxyribose sugar to remove the methylated base, leaving an apurinic or apyrimidinic site.","definition_xrefs":["PMID:14517230","PMID:10777493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylbase DNA N-glycosylase activity","termid":"GO:0003905"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"DNA-3-methylbase glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA-3-methyladenine glycosylase III","type":"related"},{"name":"Mag III","type":"narrow"},{"name":"MagIII","type":"narrow"}],"termid":"GO:0043733","terms_by_termid":{"GO:0008725":null}}


id: PBO:0027852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_resection_during_replication_fork_processing","termid":"PBO:0027852"}


id: GO:0060260
data:
  {"annotated_genes":["SJAG_01952","SJAG_00909","SJAG_04705","SJAG_00297","SJAG_02551","SJAG_01403","SJAG_04820","SJAG_02849","SJAG_00342","SJAG_05203","SJAG_03573","SJAG_04099","SJAG_00150","SJAG_04647","SJAG_02391","SJAG_02494","SJAG_00904","SJAG_00766","SJAG_03061","SJAG_03590","SJAG_05341","SJAG_01771","SJAG_03622","SJAG_03421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85865,111315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[86518,102486,105166,111424,92004,104878,104851,115030,90478,91523,95159,99557,101810,110859,102354,102161,83625,90589,86827,94812,99818,98092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dph","GOC:tb","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription initiation","termid":"GO:2000142"},{"relation_name":"regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060260","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: PBO:0066634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIMS binding protein 2","termid":"PBO:0066634"}


id: PBO:0017780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial S-adenosylmethionine transmembrane transporter (predicted)","termid":"PBO:0017780"}


id: PBO:0084211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homocitrate synthase isozyme; catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, which is the first step in the lysine biosynthesis pathway; LYS21 has a paralog, LYS20, that arose from the whole genome duplication","termid":"PBO:0084211"}


id: RO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has phenotype","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenotype_of","termid":"RO:0002201"}


id: GO:2000216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"positively_regulates","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"positive regulation of proline metabolic process","synonyms":[{"name":"positive regulation of proline metabolism","type":"exact"}],"termid":"GO:2000216"}


id: GO:1903665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of asexual reproduction.","definition_xrefs":["GOC:TermGenie","PMID:24390142","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual reproduction","termid":"GO:1903664"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asexual reproduction","synonyms":[{"name":"down regulation of asexual reproduction","type":"exact"},{"name":"down-regulation of asexual reproduction","type":"exact"},{"name":"downregulation of asexual reproduction","type":"exact"},{"name":"inhibition of asexual reproduction","type":"narrow"}],"termid":"GO:1903665"}


id: GO:1905455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myeloid progenitor cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:27010503","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901534"},{"relation_name":"is_a","term_name":"regulation of myeloid progenitor cell differentiation","termid":"GO:1905453"},{"relation_name":"positively_regulates","term_name":"myeloid progenitor cell differentiation","termid":"GO:0002318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid progenitor cell differentiation","synonyms":[{"name":"activation of myeloid progenitor cell differentiation","type":"narrow"},{"name":"up regulation of myeloid progenitor cell differentiation","type":"exact"},{"name":"up-regulation of myeloid progenitor cell differentiation","type":"exact"},{"name":"upregulation of myeloid progenitor cell differentiation","type":"exact"}],"termid":"GO:1905455"}


id: PBO:0064186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIA","termid":"PBO:0064186"}


id: SO:1000060
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The amino acid change following from the codon change does not change the gross properties (size, charge, hydrophobicity) of the amino acid at that position.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000060 sequence_variant_causing_conservative_missense_codon_change_in_transcript (obsolete SO:1000060)","synonyms":[{"name":"mutation causing conservative missense codon change in transcript","type":"related"},{"name":"sequence variant causing conservative missense codon change in transcript","type":"exact"}],"termid":"SO:1000060"}


id: GO:0047300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxamine + pyruvate = L-alanine + pyridoxal.","definition_xrefs":["EC:2.6.1.30","RHEA:12841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyridoxamine-pyruvate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.30-RXN","KEGG_REACTION:R01712"],"synonyms":[{"name":"pyridoxamine--pyruvate aminotransferase activity","type":"related"},{"name":"pyridoxamine-pyruvate aminotransferase activity","type":"exact"},{"name":"pyridoxamine-pyruvic transaminase","type":"broad"},{"name":"pyridoxamine:pyruvate aminotransferase activity","type":"related"},{"name":"pyridoxamineu-pyruvic transaminase activity","type":"related"}],"termid":"GO:0047300"}


id: PBO:0068961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 205, pseudogene","termid":"PBO:0068961"}


id: PBO:0079088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-1","termid":"PBO:0079088"}


id: GO:0102927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-chaconine + UDP-L-rhamnose = H+ + alpha-chaconine + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"beta-chaconine rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8883"],"termid":"GO:0102927"}


id: PBO:0040469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase c subunit lysine N-methyltransferase","termid":"PBO:0040469"}


id: PBO:0075791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 10 pseudogene 2","termid":"PBO:0075791"}


id: GO:0035313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of an epidermal cell along or through a wound gap that contributes to the reestablishment of a continuous epidermis.","definition_xrefs":["GOC:bf","PMID:15269788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wound healing, spreading of cells","termid":"GO:0044319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}


id: GO:0007344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The merging of two pronuclei in a fertilized egg to fuse and produce a single zygotic genome.","definition_xrefs":["ISBN:087969307X","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronuclear fusion","termid":"GO:0007344"}


id: PBO:0056643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 4","termid":"PBO:0056643"}


id: FYPO:0007323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah","PMID:32071154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal stress granule assembly during vegetative growth","termid":"FYPO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal stress granule assembly during cellular response to heat","synonyms":[{"name":"normal cytoplasmic stress granule assembly during cellular response to heat","type":"exact"},{"name":"normal stress granule assembly during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal stress granule assembly during cellular response to heat during vegetative growth","type":"exact"},{"name":"normal stress granule assembly during cellular response to heat stress","type":"exact"},{"name":"normal stress granule formation during cellular response to heat","type":"exact"}],"termid":"FYPO:0007323"}


id: PBO:0078363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 8-1","termid":"PBO:0078363"}


id: GO:0046827
data:
  {"annotated_genes":["SJAG_04312","SJAG_01245","SJAG_01805","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89942,96575,97984,107141],"is_not":false,"summary":null,"term":"GO:0046827"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleocytoplasmic transport","termid":"GO:0046824"},{"relation_name":"is_a","term_name":"regulation of protein export from nucleus","termid":"GO:0046825"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"positively_regulates","term_name":"protein export from nucleus","termid":"GO:0006611"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein export from nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein export from nucleus","type":"narrow"},{"name":"positive regulation of protein export from cell nucleus","type":"exact"},{"name":"positive regulation of protein export out of nucleus","type":"exact"},{"name":"positive regulation of protein transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of protein-nucleus export","type":"exact"},{"name":"stimulation of protein export from nucleus","type":"narrow"},{"name":"up regulation of protein export from nucleus","type":"exact"},{"name":"up-regulation of protein export from nucleus","type":"exact"},{"name":"upregulation of protein export from nucleus","type":"exact"}],"termid":"GO:0046827","terms_by_termid":{"GO:0046827":null}}


id: PBO:0057862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3173","termid":"PBO:0057862"}


id: PBO:0012534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_morphogenesis_of","termid":"PBO:0012534"}


id: PBO:0056235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI2 antisense RNA 2","termid":"PBO:0056235"}


id: PBO:0069484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 751, pseudogene","termid":"PBO:0069484"}


id: FYPO:0000052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not proceed normally through a meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal meiotic cell cycle","synonyms":[{"name":"meiotic cell cycle defects","type":"exact"}],"termid":"FYPO:0000052"}


id: PBO:0039099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 3","termid":"PBO:0039099"}


id: PBO:0028635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cytochalasin_D","termid":"PBO:0028635"}


id: GO:0050951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of temperature stimulus","synonyms":[{"name":"sensory perception of thermal stimulus","type":"exact"}],"termid":"GO:0050951"}


id: PBO:0031550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_separation","termid":"PBO:0031550"}


id: PBO:0045542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 2","termid":"PBO:0045542"}


id: PBO:0083019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a discrete protein; YKL003W-A was added based on homology to closely related fungi, but was later withdrawn because it was completely contained within DID4/YKL002W","termid":"PBO:0083019"}


id: PR:A6X982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15D4.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.13c","synonyms":[{"name":"Spom972h-SPBC15D4.13c","type":"exact"}],"termid":"PR:A6X982"}


id: PBO:0072046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 16","termid":"PBO:0072046"}


id: GO:0046719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any virus-mediated process that modulates the levels of viral proteins in a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation by virus of viral protein levels in host cell","synonyms":[{"name":"regulation of viral protein levels","type":"exact"}],"termid":"GO:0046719"}


id: FYPO:0004859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more polysaccharides measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"},{"relation_name":"is_a","term_name":"altered level of substance in cell wall during vegetative growth","termid":"FYPO:0002627"},{"relation_name":"output_of","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002946"],"is_obsolete":false,"name":"increased cell wall polysaccharide level","synonyms":[{"name":"increased cell wall polysaccharide accumulation","type":"related"},{"name":"increased cell wall polysaccharide level during mitotic cell cycle","type":"related"},{"name":"increased cell wall polysaccharide level during vegetative growth","type":"exact"}],"termid":"FYPO:0004859"}


id: GO:1990870
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A polymer of proteins that form a fine fiber.","definition_xrefs":["PMID:12764608"],"gene_count":0,"genotype_count":0,"name":"obsolete protein fibril (obsolete GO:1990870)","termid":"GO:1990870"}


id: PBO:0091243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial D-glutamate cyclase Dgc1","termid":"PBO:0091243"}


id: PBO:0091628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid dehydrogenase, implicated in cellular detoxification","termid":"PBO:0091628"}


id: MOD:01958
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a two-iron two-sulfur cluster to bis-L-cysteinyl bisglutathion-S-yl diiron disulfide.","definition_xrefs":["PubMed:17121859","RESID:AA0603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis-L-cysteinyl bisglutathion-S-yl diiron disulfide","synonyms":[{"name":"bis-L-cysteinyl bisglutathion-S-yl diiron disulfide","type":"exact"},{"name":"di-mu-sulfido-bis(cysteinato)-1kappaS,2kappaS-bis(glutathionato)-1kappaS,2kappaS-diiron","type":"exact"},{"name":"mitochondrial glutaredoxin 2 dimer iron-sulfur cluster","type":"exact"},{"name":"plant glutaredoxin C1 dimer iron-sulfur cluster","type":"exact"}],"termid":"MOD:01958"}


id: PBO:0015706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein blinkin, Spc7","termid":"PBO:0015706"}


id: PBO:0084124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heterotrimeric nascent polypeptide-associated complex beta3 subunit; complex binds ribosomes via its beta-subunits in close proximity to nascent polypeptides; interacts with Caf130p of the CCR4-NOT complex; similar to human BTF3; BTT1 has a paralog, EGD1, that arose from the whole genome duplication","termid":"PBO:0084124"}


id: PBO:0046041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit gamma B","termid":"PBO:0046041"}


id: GO:0016234
data:
  {"annotated_genes":["SJAG_04055","SJAG_01408","SJAG_04768","SJAG_04140","SJAG_00302","SJAG_04601","SJAG_01374","SJAG_00178","SJAG_00082","SJAG_03543","SJAG_03161","SJAG_00335","SJAG_04187","SJAG_01837","SJAG_03300","SJAG_03745","SJAG_00471","SJAG_03048","SJAG_01805","SJAG_04855","SJAG_01186","SJAG_04645"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108176,87088,95170,101497,108726,112800,100430,89927,84905,84906,98410,98493,111018,85161,88368,83663,108727,111609,111610,107319,100341,108725,101860,86142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"A discrete intracellular part formed of aggregated molecules such as proteins or other biopolymers.","definition_xrefs":["PMID:11121744","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inclusion body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao120573470","Wikipedia:Inclusion_bodies"],"synonyms":[{"name":"cellular inclusion","type":"related"},{"name":"neuronal cytoplasmic inclusion","type":"narrow"}],"termid":"GO:0016234","terms_by_termid":{"GO:0140602":null}}


id: PR:Q09777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G-protein signaling 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.12c","synonyms":[{"name":"Spom972h-rgs1","type":"exact"}],"termid":"PR:Q09777"}


id: GO:0009379
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA helicase complex found at Holliday junctions where the helicase activity is involved in the migration of the junction branch point. The best-characterized example is the E. coli RuvAB complex, in which a hexamer of RuvB subunits possesses helicase activity that is modulated by association with RuvA.","definition_xrefs":["PMID:16935884","PMID:9442895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Holliday junction helicase complex","termid":"GO:0009379"}


id: GO:0007445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of embryonic cells to the imaginal disc founder populations, groups of cells that are committed to contribute to the formation of an imaginal disc compartment.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of imaginal disc primordium","termid":"GO:0007445"}


id: GO:0044748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule that contributes to forming distinct miRNA isoforms from a mature miRNA.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0004527","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing","synonyms":[{"name":"exonucleolytic trimming to generate 3' end of miRNA","type":"broad"}],"termid":"GO:0044748"}


id: GO:0009524
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The phragmoplast is a plant cell specific cytoplasmic structure composed of cytoskeletal polymers, membranes, and associated cytosolic proteins that functions as the focused secretory module for assembling the cell plate.","definition_xrefs":["PMID:28943203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"phragmoplast","secondary_identifiers":["Wikipedia:Phragmoplast"],"termid":"GO:0009524"}


id: GO:2000533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renal albumin absorption.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of renal albumin absorption","termid":"GO:2000532"},{"relation_name":"negatively_regulates","term_name":"renal albumin absorption","termid":"GO:0097018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal albumin absorption","termid":"GO:2000533"}


id: FYPO:0003980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}


id: PBO:0056914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC-induced long non-coding RNA","termid":"PBO:0056914"}


id: GO:0018080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-tryptophan, to form peptidyl-L-6'-bromotryptophan.","definition_xrefs":["RESID:AA0179"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan bromination (obsolete GO:0018080)","termid":"GO:0018080"}


id: GO:2000734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000733"},{"relation_name":"negatively_regulates","term_name":"glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"negative regulation of GDNF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell line-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000734"}


id: PR:Q9UTG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad2 gene.","definition_xrefs":["UniProtKB:Q9UTG8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.07c","synonyms":[{"name":"Spom972h-dad2","type":"exact"},{"name":"high osmolarity sensitivity protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"outer kinetochore protein dad2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTG8"}


id: PBO:0051965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intersectin 1","termid":"PBO:0051965"}


id: PBO:0040344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 1","termid":"PBO:0040344"}


id: FYPO:0003057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of an RNA in a cell is abnormal. An RNA may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"RNA localization phenotype","termid":"FYPO:0004853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal RNA localization","synonyms":[{"name":"abnormal RNA localisation","type":"exact"},{"name":"abnormal cellular RNA localisation","type":"exact"},{"name":"abnormal cellular RNA localization","type":"exact"}],"termid":"FYPO:0003057"}


id: PBO:0089784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shuttle craft like transcriptional repressor/ubiquitin-protein ligase E3","termid":"PBO:0089784"}


id: GO:0031389
data:
  {"annotated_genes":["SJAG_01010","SJAG_00729","SJAG_02563","SJAG_02182","SJAG_00272"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85277,85728,90097,91406,108406],"is_not":false,"summary":null,"term":"GO:0031389"}]},"cv_name":"cellular_component","definition":"A pentameric protein complex related to replication factor C, which loads a trimeric complex of checkpoint proteins (known as the checkpoint clamp or 9-1-1 complex) onto DNA at damage sites; functions in DNA damage cell cycle checkpoints. In Schizosaccharomyces pombe the subunits are known as Rad17, Rfc2, Rfc3, Rfc4, and Rfc5, while in Saccharomyces cerevisiae the subunits are known as Rad24p, Rfc2p, Rfc3p, Rfc4p, and Rfc5p.","definition_xrefs":["PMID:14614842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Rad17 RFC-like complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RFC (Rad17)","type":"exact"},{"name":"Rad17-RFC","type":"exact"},{"name":"Rad17-RLC","type":"exact"},{"name":"Rad24p RFC-like complex","type":"exact"}],"termid":"GO:0031389","terms_by_termid":{"GO:0031389":null}}


id: PBO:0070517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 16","termid":"PBO:0070517"}


id: PBO:0068050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 355","termid":"PBO:0068050"}


id: PATO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000810 touch value (obsolete PATO:0000810)","termid":"PATO:0000810"}


id: PBO:0044045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and serine rich nuclear protein 2","termid":"PBO:0044045"}


id: PBO:0018070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly protien Sdh8 (predicted)","termid":"PBO:0018070"}


id: PBO:0077857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 2","termid":"PBO:0077857"}


id: PBO:0064383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 5","termid":"PBO:0064383"}


id: GO:0070238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A T cell apoptotic process that occurs towards the end of the expansion phase following the initial activation of mature T cells by antigen via the accumulation of pro-apoptotic gene products and decrease in anti-apoptotic gene products.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"},{"relation_name":"part_of","term_name":"T cell homeostasis","termid":"GO:0043029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated T cell autonomous cell death","synonyms":[{"name":"ACAD","type":"broad"},{"name":"activated T cell apoptosis","type":"broad"},{"name":"activated T lymphocyte autonomous cell death","type":"exact"},{"name":"activated T-cell autonomous cell death","type":"exact"},{"name":"activated T-lymphocyte autonomous cell death","type":"exact"},{"name":"activated cell autonomous cell death","type":"broad"}],"termid":"GO:0070238"}


id: GO:0036027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and urokinase-type plasminogen activator (PLAU); formation of the complex inhibits the serine protease activity of urokinase-type plasminogen activator.","definition_xrefs":["PMID:3501295","GOC:ans","PMID:8536714","PMID:10340997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-PLAU complex","synonyms":[{"name":"PCI-PLAU complex","type":"exact"},{"name":"SERPINA5-PLAU complex","type":"exact"},{"name":"plasma serine protease inhibitor-PLAU complex","type":"exact"},{"name":"protein C inhibitor-U-plasminogen activator complex","type":"exact"},{"name":"protein C inhibitor-uPA complex","type":"exact"},{"name":"protein C inhibitor-urokinase-type plasminogen activator complex","type":"exact"},{"name":"serpin A5-PLAU complex","type":"exact"}],"termid":"GO:0036027"}


id: GO:0015761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which mannose is transported across a lipid bilayer, from one side of a membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"mannose transmembrane transport","synonyms":[{"name":"mannose transport","type":"related"}],"termid":"GO:0015761"}


id: PBO:0018219
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siderophore TRansporter","termid":"PBO:0018219"}


id: PBO:0068811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 48, pseudogene","termid":"PBO:0068811"}


id: PBO:0052397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member C3","termid":"PBO:0052397"}


id: SO:0001864
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif to which the S. pombe Sap1 protein binds. The consensus sequence is 5'-TARGCAGNTNYAACGMG-3'; it is found at the mating type locus, where it is important for mating type switching, and at replication fork barriers in rDNA repeats.","definition_xrefs":["PMID:16166653","PMID:7651412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sap1_recognition_motif","synonyms":[{"name":"Sap1 recognitions site","type":"exact"}],"termid":"SO:0001864"}


id: GO:0047716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1H-imidazole + acetyl-CoA = N-acetylimidazole + CoA.","definition_xrefs":["RHEA:15813","EC:2.3.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"imidazole N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03621","MetaCyc:IMIDAZOLE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:imidazole N-acetyltransferase activity","type":"related"},{"name":"imidazole acetylase activity","type":"related"},{"name":"imidazole acetyltransferase activity","type":"related"}],"termid":"GO:0047716"}


id: GO:0048520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli.","definition_xrefs":["GOC:jid","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of behavior","synonyms":[{"name":"upregulation of behavior","type":"exact"},{"name":"stimulation of behavior","type":"narrow"},{"name":"up regulation of behavior","type":"exact"},{"name":"up-regulation of behavior","type":"exact"},{"name":"activation of behavior","type":"narrow"}],"termid":"GO:0048520"}


id: GO:0018207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-phenylalanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-phenylalanine modification","termid":"GO:0018207"}


id: MOD:00602
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue amino or imino group with an methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated residue","synonyms":[{"name":"NMeRes","type":"exact"}],"termid":"MOD:00602"}


id: GO:0050571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-anhydro-D-glucitol + NADP+ = 1,5-anhydro-D-fructose + H+ + NADPH.","definition_xrefs":["EC:1.1.1.263","RHEA:20665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose reductase activity","secondary_identifiers":["MetaCyc:1.1.1.263-RXN","KEGG_REACTION:R05682"],"synonyms":[{"name":"1,5-anhydro-D-glucitol:NADP+ oxidoreductase activity","type":"related"},{"name":"AF reductase activity","type":"related"}],"termid":"GO:0050571"}


id: GO:0045634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of melanocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"melanocyte differentiation","termid":"GO:0030318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of melanocyte differentiation","synonyms":[{"name":"regulation of melanophore differentiation","type":"exact"}],"termid":"GO:0045634"}


id: PBO:0051128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2-5","termid":"PBO:0051128"}


id: GO:0043177
data:
  {"annotated_genes":["SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016594"}]},"cv_name":"molecular_function","definition":"Binding to an organic acid, any acidic compound containing carbon in covalent linkage.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"organic acid binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043177","terms_by_termid":{"GO:0016594":null}}


id: PBO:0068380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 181","termid":"PBO:0068380"}


id: GO:0014035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neural crest cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate determination","termid":"GO:0048867"},{"relation_name":"part_of","term_name":"neural crest cell fate commitment","termid":"GO:0014034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell fate determination","termid":"GO:0014035"}


id: GO:0033383
data:
  {"annotated_genes":["SJAG_03352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033384"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving geranyl diphosphate, the universal precursor of the monoterpenes.","definition_xrefs":["MetaCyc:PWY-5122","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"geranyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"geranyl diphosphate metabolism","type":"exact"},{"name":"geranyldiphosphate metabolic process","type":"exact"}],"termid":"GO:0033383","terms_by_termid":{"GO:0033384":null}}


id: PBO:0078197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-7 (non-functional)","termid":"PBO:0078197"}


id: PBO:0068948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 192, pseudogene","termid":"PBO:0068948"}


id: GO:0009454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to environmental oxygen.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerotaxis","synonyms":[{"name":"taxis in response to atmospheric oxygen","type":"exact"}],"termid":"GO:0009454"}


id: GO:0004285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of protein hormones, neuropeptides and renin from their precursors, generally by cleavage of -Lys-Arg-Xaa at the Arg-Xaa bond.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proprotein convertase 1 activity (obsolete GO:0004285)","synonyms":[{"name":"NEC 1 activity","type":"narrow"},{"name":"PC1 activity","type":"narrow"},{"name":"neuroendocrine convertase 1 activity","type":"narrow"},{"name":"prohormone convertase 3","type":"related"},{"name":"prohormone convertase I activity","type":"narrow"},{"name":"proprotein convertase 1 activity","type":"exact"}],"termid":"GO:0004285"}


id: PR:Q9P4W1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox8 gene.","definition_xrefs":["UniProtKB:Q9P4W1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase polypeptide VIII, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.16c","synonyms":[{"name":"Spom972h-cox8","type":"exact"}],"termid":"PR:Q9P4W1"}


id: FYPO:0003290
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of the glycan moiety of a glycoprotein differs from wild type.","definition_xrefs":["PMID:9125114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"output_of","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal glycoprotein glycan structure","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abnormal glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0003290","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0072397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 2","termid":"PBO:0072397"}


id: GO:0035322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a mesenchymal cell from one site to another that will contribute to the formation of a limb bud.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell migration","termid":"GO:0090497"},{"relation_name":"part_of","term_name":"mesenchyme migration involved in limb bud formation","termid":"GO:0090496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell migration involved in limb bud formation","termid":"GO:0035322"}


id: FYPO:0004909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that dots cannot be observed, and the protein is instead distributed throughout the nucleus.","definition_xrefs":["PomBase:mah","PMID:8937982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of punctate nuclear protein localization","termid":"FYPO:0005863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"loss of punctate nuclear protein localization, with protein distributed in nucleus","synonyms":[{"name":"abolished punctate nuclear protein localization, with protein distributed in nucleus","type":"exact"},{"name":"loss of punctate nuclear protein localisation, with protein distributed in nucleus","type":"exact"},{"name":"loss of punctate nuclear protein localization, with protein dispersed through nucleus","type":"exact"},{"name":"loss of punctate nuclear protein localization, with protein distributed in nucleus, during mitotic cell cycle","type":"related"},{"name":"loss of punctate nuclear protein localization, with protein distributed in nucleus, during vegetative growth","type":"exact"},{"name":"loss of punctate nuclear protein localization, with protein distributed throughout nucleus","type":"exact"}],"termid":"FYPO:0004909"}


id: GO:0099505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the potential difference across a presynaptic membrane.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of presynaptic membrane potential","synonyms":[{"name":"regulation of pre-synaptic membrane potential","type":"exact"}],"termid":"GO:0099505"}


id: FYPO:0001374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex of a spore is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex","termid":"FYPO:0001371"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex in spores","termid":"FYPO:0001372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to medial cortex in spores","synonyms":[{"name":"protein localisation to medial cortex abolished in spores","type":"exact"},{"name":"protein localization to medial cortex abolished in spores","type":"exact"},{"name":"protein localization to medial ring abolished in spores","type":"exact"}],"termid":"FYPO:0001374"}


id: PBO:0028606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_pyrithiamine","termid":"PBO:0028606"}


id: PBO:0059635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 1","termid":"PBO:0059635"}


id: PBO:0067654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 831, pseudogene","termid":"PBO:0067654"}


id: PBO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 interacting factor 3 (predicted)","termid":"PBO:0000282"}


id: PBO:0078905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 14-1","termid":"PBO:0078905"}


id: GO:0005872
data:
  {"annotated_genes":["SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95347],"is_not":false,"summary":null,"term":"GO:0005872"}]},"cv_name":"cellular_component","definition":"Any complex that includes a dimer of molecules from the kinesin superfamily and any associated proteins, and moves towards the minus end of a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"minus-end kinesin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005872","terms_by_termid":{"GO:0005872":null}}


id: PBO:0088848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex subunit","termid":"PBO:0088848"}


id: GO:0015903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fluconazole into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fluconazole is an antifungal drug used for oral candidiasis and cryptococcal meningitis; it is still under study for treatment of vaginal candidiasis and other fungal infections.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"fluconazole transport","termid":"GO:0015903"}


id: GO:1902530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein linear polyubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:21931591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein linear polyubiquitination","termid":"GO:1902528"},{"relation_name":"is_a","term_name":"positive regulation of protein polyubiquitination","termid":"GO:1902916"},{"relation_name":"positively_regulates","term_name":"protein linear polyubiquitination","termid":"GO:0097039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein linear polyubiquitination","synonyms":[{"name":"activation of M1 linkage","type":"narrow"},{"name":"activation of protein linear polyubiquitination","type":"narrow"},{"name":"positive regulation of M1 linkage","type":"narrow"},{"name":"up regulation of M1 linkage","type":"narrow"},{"name":"up regulation of protein linear polyubiquitination","type":"exact"},{"name":"up-regulation of M1 linkage","type":"narrow"},{"name":"up-regulation of protein linear polyubiquitination","type":"exact"},{"name":"upregulation of M1 linkage","type":"narrow"},{"name":"upregulation of protein linear polyubiquitination","type":"exact"}],"termid":"GO:1902530"}


id: PBO:0084181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone and assembly chaperone for Rps6a/b; involved in histone exchange, replacing histone H2A-H2B dimers or histone variant dimers from assembled nucleosomes; promotes solubility of Rps6a, and 40S ribosomal subunit biogenesis; role in transport of H2A and H2B histones to the nucleus; regulates microtubule dynamics during mitosis; interacts with mitotic cyclin Clb2p; controls bud morphogenesis; phosphorylated by CK2; protein abundance increases in response to DNA replication stress","termid":"PBO:0084181"}


id: GO:1903928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyanide stimulus.","definition_xrefs":["PMID:21854848","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to cyanide","termid":"GO:1903927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cyanide","termid":"GO:1903928"}


id: PBO:0088130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein kinase; negatively regulates membrane fusion; associates with vacuolar membrane through palmitoylation of one or more cysteines in consensus sequence; vacuolar membrane association is essential to its kinase activity; mutant shows defect in CPY processing; ortholog of human serine/threonine kinase 16 (STK16)","termid":"PBO:0088130"}


id: PBO:0039115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha hemoglobin stabilizing protein","termid":"PBO:0039115"}


id: PBO:0004878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC amino acid transporter (predicted)","termid":"PBO:0004878"}


id: GO:1900107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nodal signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activin receptor signaling pathway","termid":"GO:0032925"},{"relation_name":"regulates","term_name":"nodal signaling pathway","termid":"GO:0038092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nodal signaling pathway","synonyms":[{"name":"regulation of nodal signaling","type":"exact"},{"name":"regulation of nodal signalling pathway","type":"exact"}],"termid":"GO:1900107"}


id: GO:0098547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the Golgi membrane that faces the lumen.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"lumenal side of Golgi membrane","termid":"GO:0098547"}


id: PBO:0067965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 267","termid":"PBO:0067965"}


id: PBO:0055559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2995","termid":"PBO:0055559"}


id: FYPO:0003494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to L-azetidine-2-carboxylic acid. Cells stop growing (and may die) at a concentration of L-azetidine-2-carboxylic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to L-azetidine-2-carboxylic acid","synonyms":[{"name":"hypersensitive to L-azetidine-2-carboxylic acid","type":"exact"},{"name":"sensitive to (S)-azetidine-2-carboxylic acid","type":"exact"},{"name":"sensitive to AZC","type":"broad"},{"name":"sensitive to L-azetidine-2-carboxylic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to L-azetidine-2-carboxylic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0003494"}


id: SO:0001453
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A negatively charged, hydorophilic amino acid encoded by the codons GAT and GAC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic_acid","synonyms":[{"name":"Asp","type":"exact"},{"name":"D","type":"exact"},{"name":"aspartic acid","type":"exact"}],"termid":"SO:0001453"}


id: GO:0004353
data:
  {"annotated_genes":["SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004354"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + H2O + NAD(P)+ = 2-oxoglutarate + NH3 + NAD(P)H + H+.","definition_xrefs":["EC:1.4.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glutamate dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70600","MetaCyc:GLUTAMATE-DEHYDROGENASE-NADP+-RXN","Reactome:R-HSA-70589","MetaCyc:GLUTAMATE-SYN2-PWY"],"synonyms":[{"name":"L-glutamate:NAD(P)+ oxidoreductase (deaminating)","type":"related"},{"name":"glutamate biosynthesis, using glutamate dehydrogenase (NAD(P)+)","type":"related"},{"name":"glutamate biosynthetic process, using glutamate dehydrogenase (NAD(P)+)","type":"related"},{"name":"glutamic dehydrogenase activity","type":"broad"}],"termid":"GO:0004353","terms_by_termid":{"GO:0004354":null}}


id: PATO:0000252
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000252 suckling reflex (obsolete PATO:0000252)","termid":"PATO:0000252"}


id: GO:0001650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.","definition_xrefs":["PMID:10754561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005730","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"fibrillar center","synonyms":[{"name":"fibrillar centre","type":"exact"}],"termid":"GO:0001650"}


id: FYPO:0001058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased amino acid import","synonyms":[{"name":"decreased amino acid import across plasma membrane","type":"exact"},{"name":"decreased amino acid import into cell","type":"exact"},{"name":"decreased amino acid uptake","type":"exact"},{"name":"reduced amino acid import","type":"exact"}],"termid":"FYPO:0001058"}


id: PR:Q9HGP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mbx2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGP0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor pvg4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC317.01","synonyms":[{"name":"MADS-box transcription factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PvGal synthesis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mbx2","type":"exact"},{"name":"pyruvylated Gal-beta-1,3-epitope synthesis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGP0"}


id: FYPO:0000744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to actin cortical patch","synonyms":[{"name":"normal protein localisation to actin cortical patch","type":"exact"},{"name":"normal protein localization to F-actin patch","type":"exact"},{"name":"normal protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"normal protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"normal protein localization to actin patch","type":"exact"}],"termid":"FYPO:0000744"}


id: PBO:0046493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergosterol biosynthesis 28 homolog","termid":"PBO:0046493"}


id: SO:1000088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a change in primary translation product of a transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000088 sequence_variant_affecting_translational_product (obsolete SO:1000088)","synonyms":[{"name":"mutation affecting translational product","type":"related"},{"name":"mutation causing partially characterised change of translational product","type":"related"},{"name":"mutation causing uncharacterised change of translational product","type":"related"},{"name":"sequence variant affecting translational product","type":"exact"},{"name":"sequence variant causing partially characterised change of translational product","type":"exact"},{"name":"sequence variant causing uncharacterised change of translational product","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_change_of_translational_product","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_change_of_translational_product","type":"exact"}],"termid":"SO:1000088"}


id: GO:0051335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reformation of the nuclear membrane during meiosis II.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane reassembly","termid":"GO:0051333"},{"relation_name":"part_of","term_name":"meiosis II","termid":"GO:0007135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"meiosis II nuclear membrane reassembly","synonyms":[{"name":"meiosis II nuclear envelope reassembly","type":"related"}],"termid":"GO:0051335"}


id: GO:0075182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of its transcription as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of symbiont transcription in response to host (obsolete GO:0075182)","termid":"GO:0075182"}


id: GO:0102475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6C-beta-D-glucosyl-2-hydroxyeriodictyol = isoorientin + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyeriodictyol 6C-glucoside dehydratase activity","secondary_identifiers":["MetaCyc:RXN-14081"],"termid":"GO:0102475"}


id: GO:0031836
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuromedin K receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurokinin receptor binding","termid":"GO:0031834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neuromedin K receptor binding","synonyms":[{"name":"neurokinin-B receptor binding","type":"exact"},{"name":"neuromedin K receptor ligand","type":"narrow"}],"termid":"GO:0031836"}


id: PBO:0072693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX family transcription factor 3","termid":"PBO:0072693"}


id: GO:0033189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin A stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin A","synonyms":[{"name":"response to retinol","type":"narrow"}],"termid":"GO:0033189"}


id: SO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A heterochromatic region of the chromosome, adjacent to the telomere (on the centromeric side) that contains repetitive DNA and sometimes genes and it is transcribed.","definition_xrefs":["POMBE:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtelomere","termid":"SO:0001997"}


id: PBO:0075909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 1","termid":"PBO:0075909"}


id: MOD:01859
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form 4-amino-3-isothiazolidinone-L-phenylalanine.","definition_xrefs":["RESID:AA0562","PubMed:17502599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-3-isothiazolidinone-L-phenylalanine","synonyms":[{"name":"(2S)-2-[(4R)-4-amino-3-oxo-1,2-thiazolidin-2-yl]-3-phenylpropanoic acid","type":"exact"},{"name":"2-(4-amino-3-oxo-isothiazolidin-2-yl)-3-phenylpropanoic acid","type":"exact"},{"name":"4-amino-3-isothiazolidinone-L-phenylalanine","type":"exact"},{"name":"CROSSLNK N,N-(cysteine-1,S-diyl)phenylalanine (Cys-Phe)","type":"exact"},{"name":"N,N-(L-cysteine-1,S-diyl)-L-phenylalanine","type":"exact"},{"name":"cysteinyl phenylalanine sulfenamide","type":"exact"},{"name":"phenylalanine-cysteine sulfenyl amide cross-link","type":"exact"},{"name":"phenylalanine-cysteine sulphenyl amide cross-link","type":"exact"}],"termid":"MOD:01859"}


id: GO:0008429
data:
  {"annotated_genes":["SJAG_02414"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109787],"is_not":false,"summary":null,"term":"GO:0008429"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylethanolamine, a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"phosphatidylethanolamine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008429","terms_by_termid":{"GO:0008429":null}}


id: PBO:0058862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9500","termid":"PBO:0058862"}


id: PBO:0068978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 222, pseudogene","termid":"PBO:0068978"}


id: GO:0035614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a stem-loop in a small nuclear RNA (snRNA). An RNA stem-loop is a secondary RNA structure consisting of a double-stranded RNA (dsRNA) stem and a terminal loop.","definition_xrefs":["GOC:sart","PMID:20455544","PMID:16568238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"},{"relation_name":"is_a","term_name":"RNA stem-loop binding","termid":"GO:0035613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"snRNA stem-loop binding","synonyms":[{"name":"small nuclear RNA stem-loop binding","type":"exact"},{"name":"snRNA hairpin binding","type":"exact"},{"name":"snRNA hairpin loop binding","type":"exact"}],"termid":"GO:0035614"}


id: GO:0021810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Signaling by neurotransmitters and their receptors that results in the initiation of movement of cells as a component of the process of glial-mediated radial migration.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","PMID:12626695","GOC:dgh","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter signaling initiating cell movement, involved in cerebral cortex radial glia guided migration (obsolete GO:0021810)","synonyms":[{"name":"neurotransmitter signalling initiating cell movement, involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021810"}


id: PBO:0041277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1QTNF3-AMACR readthrough (NMD candidate)","termid":"PBO:0041277"}


id: GO:0006310
data:
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process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. 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id: GO:1990971
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Glycoprotein complex of the C1q/TNF superfamily found in the extracellular matrix (ECM) where it is an important component of the elastic fiber system. A homotrimer that will combine to form supramolecular EMILIN structures.","definition_xrefs":["GOC:bhm","PMID:10821830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"EMILIN complex","synonyms":[{"name":"EMILIN-1 complex","type":"narrow"},{"name":"EMILIN-2 complex","type":"narrow"},{"name":"Elastic microfibrillar interface 1 complex","type":"narrow"},{"name":"Elastic microfibrillar interface 2 complex","type":"narrow"}],"termid":"GO:1990971"}


id: PBO:0064269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G3","termid":"PBO:0064269"}


id: PBO:0065193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 4B","termid":"PBO:0065193"}


id: GO:0007528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction.","definition_xrefs":["GOC:mtg_OBO2OWL_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular junction development","synonyms":[{"name":"NMJ stability","type":"related"},{"name":"neuromuscular junction organization","type":"exact"},{"name":"neuromuscular junction stability","type":"related"}],"termid":"GO:0007528"}


id: GO:0060020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells of the neural tube give rise to Brgmann glial cells, specialized bipotential progenitors cells of the cerebellum. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","PMID:10375501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte differentiation","termid":"GO:0048708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Bergmann glial cell differentiation","termid":"GO:0060020"}


id: GO:0034646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid monolayer that surrounds and encloses an organelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"intracellular organelle","termid":"GO:0043229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"}


id: GO:0102607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta-hydroxy-12,15-cassadiene-11-one + NADPH + O2 + H+ = 2beta,3beta-dihydroxy-12,15-cassadiene-11-one + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3beta-hydroxy-12,15-cassadiene-11-one 2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-15433"],"termid":"GO:0102607"}


id: GO:1900160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which plastidial DNA and associated proteins organize into a compact, orderly structure.","definition_xrefs":["GOC:TermGenie","PMID:12081370","GOC:emb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plastid chromosome packaging","synonyms":[{"name":"DNA organisation in plastid","type":"exact"},{"name":"DNA organization in plastid","type":"exact"},{"name":"plastid DNA packaging","type":"exact"},{"name":"plastidial DNA packaging","type":"exact"}],"termid":"GO:1900160"}


id: PBO:0042040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 92","termid":"PBO:0042040"}


id: PBO:0080711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 11","termid":"PBO:0080711"}


id: GO:1903698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microvillus assembly.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:22797597","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microvillus assembly","termid":"GO:0032534"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"positively_regulates","term_name":"microvillus assembly","termid":"GO:0030033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of microvillus assembly","synonyms":[{"name":"activation of microvillus assembly","type":"narrow"},{"name":"activation of microvillus biogenesis","type":"related"},{"name":"positive regulation of microvillus biogenesis","type":"related"},{"name":"up regulation of microvillus assembly","type":"exact"},{"name":"up regulation of microvillus biogenesis","type":"related"},{"name":"up-regulation of microvillus assembly","type":"exact"},{"name":"up-regulation of microvillus biogenesis","type":"related"},{"name":"upregulation of microvillus assembly","type":"exact"},{"name":"upregulation of microvillus biogenesis","type":"related"}],"termid":"GO:1903698"}


id: SO:0001752
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL7 RNA leader sequence to the 5' end of an mRNA. SL7 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL7_acceptor_site","synonyms":[{"name":"SL37 acceptor site","type":"exact"}],"termid":"SO:0001752"}


id: GO:0043230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Organized structure of distinctive morphology and function, occurring outside the cell. Includes, for example, extracellular membrane vesicles (EMVs) and the cellulosomes of anaerobic bacteria and fungi.","definition_xrefs":["PMID:9914479","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle","termid":"GO:0043226"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extracellular organelle","termid":"GO:0043230"}


id: PBO:0036125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_processing_during_vegetative_growth","termid":"PBO:0036125"}


id: PBO:0065076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 3","termid":"PBO:0065076"}


id: PBO:0049247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRPEL2 pseudogene 1","termid":"PBO:0049247"}


id: GO:0009635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a herbicide stimulus. Herbicides are chemicals used to kill or control the growth of plants.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to herbicide","synonyms":[{"name":"herbicide susceptibility/resistance","type":"related"}],"termid":"GO:0009635"}


id: PBO:0002686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMR and DUF1771 domain protein (predicted)","termid":"PBO:0002686"}


id: FYPO:0004940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing chloroacetaldehyde.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on chloroacetaldehyde","synonyms":[{"name":"normal cell population growth in presence of chloroacetaldehyde","type":"exact"},{"name":"normal cell population growth on CAA","type":"exact"},{"name":"normal cell population growth on chloroacetaldehyde","type":"exact"},{"name":"normal cellular response to chloroacetaldehyde","type":"related"},{"name":"normal vegetative cell population growth on chloroacetaldehyde","type":"exact"}],"termid":"FYPO:0004940"}


id: MOD:00155
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to L-3',4'-dihydroxyphenylalanine.","definition_xrefs":["OMSSA:194","OMSSA:64","RESID:AA0146","ChEBI:141815","PubMed:1903612","PubMed:3734192","DeltaMass:0","PubMed:1610822","Unimod:35#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated tyrosine","termid":"MOD:00707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3',4'-dihydroxyphenylalanine","synonyms":[{"name":"(2S)-2-amino-3-(3,4-dihydroxyphenyl)propanoic acid","type":"exact"},{"name":"3,4-Dihydroxy-Phenylalanine (from Tyrosine) (DOPA)","type":"exact"},{"name":"3HyTyr","type":"exact"},{"name":"L-3',4'-dihydroxyphenylalanine","type":"exact"},{"name":"L-3'-hydroxytyrosine","type":"exact"},{"name":"L-DOPA","type":"exact"},{"name":"MOD_RES 3',4'-dihydroxyphenylalanine","type":"exact"},{"name":"hydroxylationy","type":"exact"},{"name":"levodopa","type":"exact"},{"name":"mod194","type":"exact"}],"termid":"MOD:00155"}


id: PBO:0085616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in early pre-mRNA splicing; component of the pre-mRNA-U1 snRNP complex, the commitment complex; interacts with Msl5p/BBP splicing factor and Sub2p; similar to metazoan splicing factor U2AF65","termid":"PBO:0085616"}


id: PBO:0079770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 pseudogene 3","termid":"PBO:0079770"}


id: GO:0071201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP6 associated with the channel via interaction with the Kv alpha subunit 4.3.","definition_xrefs":["PMID:15911355","PMID:12575952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Kv4.3-DPP6 channel complex","secondary_identifiers":["CORUM:599"],"synonyms":[{"name":"Kv4.3-DPPX channel complex","type":"exact"}],"termid":"GO:0071201"}


id: PBO:0048670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase beta 1","termid":"PBO:0048670"}


id: PBO:0061403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPR2 like, GATOR1 complex subunit","termid":"PBO:0061403"}


id: GO:0039692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication where the template is single-stranded RNA (ssRNA), and which proceeds via a double stranded DNA (dsDNA) intermediate molecule. Viral genomic RNA is first reverse transcribed into dsDNA, which integrates into the host chromosomal DNA, where it is transcribed by host RNA polymerase II.","definition_xrefs":["GOC:jl","VZ:1937","GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single stranded viral RNA replication via double stranded DNA intermediate","secondary_identifiers":["GO:0045090"],"synonyms":[{"name":"retroviral genome replication","type":"exact"},{"name":"viral ssRNA replication via dsDNA intermediate","type":"related"}],"termid":"GO:0039692"}


id: FYPO:0004153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of flocculation when the population is in stationary phase. Flocculation is the non-sexual aggregation of single cells.","definition_xrefs":["PMID:15047724","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"increased flocculation in stationary phase","termid":"FYPO:0004153"}


id: PBO:0065403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMA5 pseudogene 1","termid":"PBO:0065403"}


id: PBO:0073788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 8","termid":"PBO:0073788"}


id: FYPO:0004709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PMID:22064477","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci","synonyms":[{"name":"increased number of Rad22 foci","type":"exact"}],"termid":"FYPO:0004709"}


id: PBO:0039914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 12","termid":"PBO:0039914"}


id: PBO:0045898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic elongation factor 2 kinase","termid":"PBO:0045898"}


id: GO:0005147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oncostatin-M receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"oncostatin-M receptor binding","synonyms":[{"name":"oncostatin-M","type":"narrow"},{"name":"oncostatin-M receptor ligand","type":"narrow"}],"termid":"GO:0005147"}


id: PBO:0065955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD21 cohesin complex component like 1","termid":"PBO:0065955"}


id: PBO:0049305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 5 pseudogene 1","termid":"PBO:0049305"}


id: FYPO:0007500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy does not occur when the cell is subject to sulfur starvation.","definition_xrefs":["PomBase:mah","GO:0016236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished macroautophagy","termid":"FYPO:0000380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished macroautophagy during sulfur starvation","synonyms":[{"name":"abolished macroautophagy during cellular response to sulfur starvation","type":"exact"},{"name":"abolished macroautophagy during sulfur depletion","type":"exact"},{"name":"abolished macroautophagy during sulfur deprivation","type":"exact"},{"name":"abolished macroautophagy during sulphur starvation","type":"exact"},{"name":"macroautophagy abolished during sulfur starvation","type":"exact"}],"termid":"FYPO:0007500"}


id: PBO:0055584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3020","termid":"PBO:0055584"}


id: MOD:00620
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:7856876","Unimod:301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine monobromobimane derivative","synonyms":[{"name":"Bromobimane","type":"related"},{"name":"Monobromobimane derivative","type":"related"}],"termid":"MOD:00620"}


id: PBO:0058965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 8, pseudogene","termid":"PBO:0058965"}


id: PBO:0044749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 28","termid":"PBO:0044749"}


id: GO:0060682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the primary ureteric bud grows along its axis dorsally toward the metanephric blastema.","definition_xrefs":["PMID:16916378","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"ureteric bud elongation","termid":"GO:0060677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ureteric bud growth","termid":"GO:0060682"}


id: PBO:0033755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spindle_pole_body_organization","termid":"PBO:0033755"}


id: PBO:0071388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 11","termid":"PBO:0071388"}


id: PBO:0080076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP38 divergent transcript","termid":"PBO:0080076"}


id: PBO:0085761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of the bud neck involved in the septin checkpoint; associates with septin proteins, negatively regulates Swe1p by phosphorylation, shows structural homology to bud neck kinases Gin4p and Hsl1p; KCC4 has a paralog, GIN4, that arose from the whole genome duplication","termid":"PBO:0085761"}


id: PBO:0043449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 10","termid":"PBO:0043449"}


id: GO:0061130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the foregut region specified to become the pancreas forms a bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"is_a","term_name":"branching involved in pancreas morphogenesis","termid":"GO:0061114"},{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic bud formation","termid":"GO:0061130"}


id: SO:0001291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N4,2'-O-dimethylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4_2_prime_O_dimethylcytidine","secondary_identifiers":["RNAMOD:083"],"synonyms":[{"name":"N4 2 prime O dimethylcytidine","type":"exact"},{"name":"N4,2'-O-dimethylcytidine","type":"exact"},{"name":"m4Cm","type":"exact"}],"termid":"SO:0001291"}


id: GO:0030002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of monoatomic anions within a cell. Monatomic anions (also called simple anions) are anions consisting of exactly one atom.","definition_xrefs":["GOC:ceb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic ion homeostasis","termid":"GO:0006873"},{"relation_name":"is_a","term_name":"monoatomic anion homeostasis","termid":"GO:0055081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular monoatomic anion homeostasis","synonyms":[{"name":"cellular anion homeostasis","type":"broad"},{"name":"cellular monoatomic anion homeostasis","type":"exact"}],"termid":"GO:0030002"}


id: PBO:0073079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal cell derived factor 4","termid":"PBO:0073079"}


id: PBO:0026804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026804"}


id: GO:0034494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the microneme membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"microneme","termid":"GO:0020009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microneme lumen","termid":"GO:0034494"}


id: PBO:0042626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 2A","termid":"PBO:0042626"}


id: PBO:0085673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in phospholipid flippase function; null allele suppresses growth and membrane trafficking defects associated with all flippase null alleles; proposed function as a phospholipid scramblase that reduces membrane asymmetry; PQ loop family member; localizes to the endosome and trans-Golgi network; non-essential gene","termid":"PBO:0085673"}


id: FYPO:0006860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of DNA replication is decreased in ribosomal DNA repeats.","definition_xrefs":["PMID:30796050","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"decreased mitotic DNA replication at rDNA","synonyms":[{"name":"reduced mitotic DNA replication at rDNA","type":"exact"},{"name":"decreased DNA replication at rDNA during mitotic cell cycle","type":"related"},{"name":"decreased mitotic DNA replication at rDNA during vegetative growth","type":"exact"},{"name":"decreased mitotic DNA replication at ribosomal DNA","type":"exact"}],"termid":"FYPO:0006860"}


id: GO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates the transition from the initiation to the elongation phases of transcription by RNA polymerase III, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter clearance during DNA-templated transcription","termid":"GO:0001109"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"RNA polymerase III promoter clearance","synonyms":[{"name":"promoter clearance from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0001110"}


id: PBO:0049591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 9, pseudogene","termid":"PBO:0049591"}


id: PBO:0002276
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.2.14","termid":"PBO:0002276"}


id: PBO:0068336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 44","termid":"PBO:0068336"}


id: PBO:0045517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aminoacyl-tRNA deacylase 2","termid":"PBO:0045517"}


id: PBO:0069756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1039, pseudogene","termid":"PBO:0069756"}


id: GO:0019672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of ethanol and acetate to butyrate and caproate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P127-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"ethanol-acetate fermentation to butyrate and caproate","termid":"GO:0019672"}


id: GO:0150166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K4 acetylation.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K4 acetylation (obsolete GO:0150166)","termid":"GO:0150166"}


id: PBO:0054645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2050","termid":"PBO:0054645"}


id: GO:0043274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phospholipase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"phospholipase binding","termid":"GO:0043274"}


id: PBO:0056370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 7","termid":"PBO:0056370"}


id: PBO:0086636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR287C is not an essential gene","termid":"PBO:0086636"}


id: GO:1990929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the hydrolysis of terminal non-reducing alpha-sulfoquinovoside residues in alpha-sulfoquinovosyl diacylglycerides and alpha-sulfoquinovosyl glycerol, generating alpha-sulfoquinovose.","definition_xrefs":["GOC:imk","PMID:26878550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on glycosyl bonds","termid":"GO:0016798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"sulfoquinovosidase activity","termid":"GO:1990929"}


id: GO:0035571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The monomethylation of the N-terminal serine of proteins to form the derivative N-methylserine.","definition_xrefs":["PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-serine methylation","termid":"GO:0035570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine monomethylation","termid":"GO:0035571"}


id: PBO:0041953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil and C2 domain containing 1A","termid":"PBO:0041953"}


id: PBO:0041067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRI3 binding protein pseudogene 1","termid":"PBO:0041067"}


id: PBO:0067786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 88","termid":"PBO:0067786"}


id: PR:Q10191
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein LTV1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01197","PRO:DNx","PANTHER:PTHR21531:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein LTV1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.17","secondary_identifiers":["UniProtKB:Q10191"],"synonyms":[{"name":"Spom972h-LTV1","type":"exact"}],"termid":"PR:Q10191"}


id: PBO:0089603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase S6K family Sck1","termid":"PBO:0089603"}


id: PR:Q9UUA6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phospholipid phosphatase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol pyrophosphate phosphatase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.18","secondary_identifiers":["UniProtKB:Q9UUA6"],"synonyms":[{"name":"DGPP phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PLPP4","type":"exact"},{"name":"phosphatidate phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUA6"}


id: PBO:0049987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 1 pseudogene 1","termid":"PBO:0049987"}


id: PR:O94582
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp3 gene.","definition_xrefs":["UniProtKB:O94582","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.09","synonyms":[{"name":"Spom972h-trp3","type":"exact"},{"name":"anthranilate synthase component I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94582"}


id: PBO:0043320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP-Gly domain containing linker protein 2","termid":"PBO:0043320"}


id: PBO:0039317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALMS1 intronic transcript 1","termid":"PBO:0039317"}


id: GO:0061272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric connecting tubule over time, from its formation to the mature structure. The mesonephric connecting tubule is a tubular segment of the mesonephric nephron; it connects the distal tubule to the collecting duct in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"},{"relation_name":"is_a","term_name":"connecting tubule development","termid":"GO:0072027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric connecting tubule development","synonyms":[{"name":"mesonephric collecting tubule development","type":"exact"},{"name":"mesonephric connecting duct development","type":"related"}],"termid":"GO:0061272"}


id: PBO:0038335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activity_directly_regulates_activity_of","termid":"PBO:0038335"}


id: GO:1902757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bis(molybdopterin guanine dinucleotide)molybdenum.","definition_xrefs":["PMID:23201473","GO_REF:0000068","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolic process","synonyms":[{"name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolism","type":"exact"}],"termid":"GO:1902757"}


id: GO:0090103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cochlea is generated and organized.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"cochlea development","termid":"GO:0090102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cochlea morphogenesis","termid":"GO:0090103"}


id: GO:1904373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a kainic acid stimulus.","definition_xrefs":["PMID:17443789","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to kainic acid","termid":"GO:1904373"}


id: CHEBI:355715
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-nitrophenyl-beta-D-galactoside","termid":"CHEBI:355715"}


id: PBO:0077613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 4","termid":"PBO:0077613"}


id: PBO:0005412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit 1","termid":"PBO:0005412"}


id: GO:0019179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-4-amino-4,6-dideoxy-D-glucose + 2-oxoglutarate = dTDP-4-dehydro-6-deoxy-D-glucose + L-glutamate.","definition_xrefs":["EC:2.6.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"dTDP-4-amino-4,6-dideoxy-D-glucose transaminase activity","secondary_identifiers":["RHEA:19085","MetaCyc:2.6.1.33-RXN"],"synonyms":[{"name":"TDP-4-keto-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"TDP-4-oxo-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase activity","type":"exact"},{"name":"dTDP-4-amino-4,6-dideoxy-D-glucose:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"thymidine diphospho-4-amino-4,6-dideoxyglucose aminotransferase activity","type":"related"},{"name":"thymidine diphospho-4-amino-6-deoxyglucose aminotransferase activity","type":"related"},{"name":"thymidine diphospho-4-keto-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"thymidine diphospho-4-keto-6-deoxy-D-glucose-glutamic transaminase activity","type":"related"}],"termid":"GO:0019179"}


id: GO:0102251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10'-apo-beta-carotenal + O2 = 13-apo-beta-carotenone + 4-methylocta-2,4,6-trienedial.","definition_xrefs":["EC:1.13.11.70","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"all-trans-beta-apo-10'-carotenal cleavage oxygenase activity","secondary_identifiers":["MetaCyc:RXN-12393","RHEA:26401"],"termid":"GO:0102251"}


id: PR:O74326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) RNA polymerase cid11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.06","synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cid11","type":"exact"},{"name":"caffeine-induced death protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide adenylyltransferase cid11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74326"}


id: FYPO:0007009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which assembly of heterochromatin mediated by small RNA is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly by small RNA","termid":"FYPO:0000187"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased heterochromatin assembly by small RNA","synonyms":[{"name":"decreased RNAi-mediated chromatin silencing","type":"exact"},{"name":"decreased chromatin silencing by small RNA","type":"exact"},{"name":"decreased heterochromatin assembly by small RNA during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin assembly by small RNA during vegetative growth","type":"exact"},{"name":"reduced heterochromatin assembly by small RNA","type":"exact"}],"termid":"FYPO:0007009"}


id: PBO:0049403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 1B","termid":"PBO:0049403"}


id: MOD:01400
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to an L-lysyl-poly(ADP-ribose).","definition_xrefs":["PubMed:6772638","RESID:AA0477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysyl-poly(ADP-ribose)","synonyms":[{"name":"L-lysyl-poly(ADP-ribose)","type":"exact"},{"name":"MOD_RES Lysyl poly(ADP-ribose)","type":"exact"},{"name":"poly[2'-adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with 1alpha-D-ribofuranosyl] (2S)-2,6-diaminohexanoate","type":"exact"}],"termid":"MOD:01400"}


id: PBO:0071800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulation of nuclear pre-mRNA domain containing 1A","termid":"PBO:0071800"}


id: PBO:0077120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane domain containing 1","termid":"PBO:0077120"}


id: GO:0046890
data:
  {"annotated_genes":["SJAG_02044","SJAG_02104","SJAG_03130","SJAG_02380","SJAG_01187","SJAG_03940","SJAG_01906","SJAG_01307","SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[107389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[107499,111601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[108877,105861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[105981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[105982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[84735,84736,101956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"regulates","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01307":null,"SJAG_01906":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_03130":null,"SJAG_03940":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of lipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of lipid anabolism","type":"exact"},{"name":"regulation of lipid biosynthesis","type":"exact"},{"name":"regulation of lipid formation","type":"exact"},{"name":"regulation of lipid synthesis","type":"exact"},{"name":"regulation of lipogenesis","type":"exact"}],"termid":"GO:0046890","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0045717":null,"GO:0070452":null,"GO:0071072":null,"GO:2001211":null}}


id: FYPO:0000429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G0 to G1 transition begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G0 to G1 transition","termid":"FYPO:0002955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"delayed G0 to G1 transition","synonyms":[{"name":"delayed G0/G1 transition","type":"exact"},{"name":"delayed exit from G0","type":"exact"},{"name":"delayed exit from cell quiescence","type":"exact"},{"name":"slow cell population growth following nitrogen starvation","type":"related"}],"termid":"FYPO:0000429"}


id: PBO:0012550
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septum promoting GTPase","termid":"PBO:0012550"}


id: PBO:0043273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 2 member B","termid":"PBO:0043273"}


id: GO:0036514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemotaxis process that directs the migration of an axon growth cone of a dopaminergic neuron to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:21106844","PMID:23517308","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopaminergic neuron axon guidance","synonyms":[{"name":"DA axon guidance","type":"exact"},{"name":"dopaminergic axon guidance","type":"exact"},{"name":"mdDA axon guidance","type":"exact"}],"termid":"GO:0036514"}


id: PBO:0068241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal pseudogene 3","termid":"PBO:0068241"}


id: PATO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in three dimensions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-D extent","synonyms":[{"name":"3D size","type":"exact"}],"termid":"PATO:0001710"}


id: GO:0052006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its host resulting in the breakdown of substances. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of substance in host (obsolete GO:0052006)","synonyms":[{"name":"catabolism by organism of substance in host","type":"exact"}],"termid":"GO:0052006"}


id: PBO:0039110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor","termid":"PBO:0039110"}


id: PBO:0072267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 5","termid":"PBO:0072267"}


id: GO:2000298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rho-dependent protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Rho-dependent protein serine/threonine kinase activity","synonyms":[{"name":"regulation of ROCK kinase activity","type":"exact"},{"name":"regulation of Rho-associated protein kinase activity","type":"exact"}],"termid":"GO:2000298"}


id: FYPO:0002101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an 3'-5' DNA helicase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 3'-5' DNA helicase activity","termid":"FYPO:0002100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000652","FYPO:0000641"],"is_obsolete":false,"name":"abolished 3'-5' DNA helicase activity","synonyms":[{"name":"3'-5' DNA helicase activity abolished","type":"exact"}],"termid":"FYPO:0002101"}


id: GO:0003845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H+.","definition_xrefs":["PMID:15761036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"11-beta-hydroxysteroid dehydrogenase [NAD(P)+] activity","secondary_identifiers":["Reactome:R-HSA-194023","Wikipedia:11beta-hydroxysteroid_dehydrogenase","MetaCyc:11-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN"],"synonyms":[{"name":"11beta-hydroxy steroid dehydrogenase","type":"related"},{"name":"11beta-hydroxysteroid dehydrogenase","type":"related"},{"name":"beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"corticosteroid 11-reductase","type":"related"},{"name":"corticosteroid 11beta-dehydrogenase","type":"related"}],"termid":"GO:0003845"}


id: GO:0120186
data:
  {"annotated_genes":["SJAG_05978","SJAG_01716","SJAG_03591","SJAG_01825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102376,111460,102471,87873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to chromatin.","definition_xrefs":["PMID:29899453","PMID:20889714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to chromatin","termid":"GO:1905634"},{"relation_name":"negatively_regulates","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to chromatin","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of protein localisation to chromatin","type":"exact"}],"termid":"GO:0120186","terms_by_termid":{"GO:1905412":null}}


id: SO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA generally longer than 200 nucleotides that cannot be classified as any other ncRNA subtype. Similar to mRNAs, lncRNAs are mainly transcribed by RNA polymerase II, are often capped by 7-methyl guanosine at their 5' ends, polyadenylated at their 3' ends and may be spliced.","definition_xrefs":["HGNC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA","secondary_identifiers":["http://www.gencodegenes.org/gencode_biotypes.html"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:lncRNA","type":"exact"},{"name":"lncRNA_transcript","type":"exact"},{"name":"long non-coding RNA","type":"exact"}],"termid":"SO:0001877"}


id: PBO:0050146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 2","termid":"PBO:0050146"}


id: PBO:0073703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI proto-oncogene","termid":"PBO:0073703"}


id: GO:0071606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 4 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 4 production","synonyms":[{"name":"CCL4 production","type":"exact"},{"name":"MIP-1b production","type":"exact"},{"name":"macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071606"}


id: PBO:0050155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 11","termid":"PBO:0050155"}


id: PBO:0053866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1141","termid":"PBO:0053866"}


id: GO:0019107
data:
  {"annotated_genes":["SJAG_00102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004379"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a myristoyl (CH3-[CH2]12-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"myristoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-141367","Reactome:R-HSA-162914"],"termid":"GO:0019107","terms_by_termid":{"GO:0004379":null}}


id: GO:0016454
data:
  {"annotated_genes":["SJAG_02305","SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88911,101662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"},{"relation_name":"is_a","term_name":"palmitoyltransferase activity","termid":"GO:0016409"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02305":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"C-palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016454","terms_by_termid":{"GO:0004758":null}}


id: PBO:0069181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 435, pseudogene","termid":"PBO:0069181"}


id: PBO:0076969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 2 pseudogene 1","termid":"PBO:0076969"}


id: PR:O94502
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 41 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C12D12.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.05c","secondary_identifiers":["UniProtKB:O94502"],"synonyms":[{"name":"Spom972h-SLC25A41","type":"exact"}],"termid":"PR:O94502"}


id: GO:0009587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phototrophin mediated phototransduction (obsolete GO:0009587)","synonyms":[{"name":"phototrophin mediated phototransduction","type":"exact"}],"termid":"GO:0009587"}


id: PBO:0087499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Elongator complex; Elongator is required for modification of wobble nucleosides in tRNA; maintains structural integrity of Elongator; homolog of human IKAP, mutations in which cause familial dysautonomia (FD)","termid":"PBO:0087499"}


id: PBO:0028364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell","termid":"PBO:0028364"}


id: PBO:0029082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_spindle_pole_body","termid":"PBO:0029082"}


id: GO:0035339
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multiprotein complex at least composed of serine palmitoyltransferases and ORM proteins (known as ORMDL proteins in mammals and other higher vertebrates) that plays a key role in sphingolipid homeostasis.","definition_xrefs":["PMID:20182505"],"gene_count":0,"genotype_count":0,"name":"obsolete SPOTS complex (obsolete GO:0035339)","synonyms":[{"name":"serine palmitoyltransferase, Orm1/2, Tsc3 and Sac1 complex","type":"narrow"}],"termid":"GO:0035339"}


id: PBO:0077796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin 1A interacting protein 2","termid":"PBO:0077796"}


id: GO:0047621
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102902],"is_not":false,"summary":null,"term":"GO:0047621"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-acylpyruvate + H2O = a carboxylate + pyruvate.","definition_xrefs":["EC:3.7.1.5","MetaCyc:ACYLPYRUVATE-HYDROLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"acylpyruvate hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_reactionID:r1401","RHEA:19009"],"synonyms":[{"name":"3-acylpyruvate acylhydrolase activity","type":"related"}],"termid":"GO:0047621","terms_by_termid":{"GO:0047621":null}}


id: PBO:0003354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 associated cyclin","termid":"PBO:0003354"}


id: GO:0015313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + fluconazole(in) = H+(in) + fluconazole(out).","definition_xrefs":["TC:2.A.1.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluconazole transmembrane transporter activity","termid":"GO:0015244"},{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"fluconazole:proton antiporter activity","synonyms":[{"name":"fluconazole:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015313"}


id: GO:0015372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (glutamate or aspartate)(out) + Na+(out) = (glutamate or aspartate)(in) + Na+(in).","definition_xrefs":["TC:2.A.23.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate/aspartate:sodium symporter activity (obsolete GO:0015372)","synonyms":[{"name":"glutamate/aspartate:sodium symporter activity","type":"exact"}],"termid":"GO:0015372"}


id: PBO:0041843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 23","termid":"PBO:0041843"}


id: GO:0016093
data:
  {"annotated_genes":["SJAG_03656","SJAG_00394","SJAG_03764","SJAG_02903","SJAG_00554","SJAG_02163","SJAG_04821","SJAG_00334","SJAG_05219","SJAG_04952","SJAG_03774","SJAG_01950","SJAG_02102","SJAG_03311","SJAG_00831","SJAG_00924","SJAG_00437","SJAG_04954","SJAG_03056","SJAG_00747"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96140,93923,104141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[86525,94484,96141,94537,90033,87260,98436,102843,94817,99910,96124,105419,112874,99710,108687,107213,92564,101117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006488"},{"annotations":[60929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["PMID:11108713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00747":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01950":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02903":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_04821":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"polyprenol metabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyprenol metabolism","type":"exact"}],"termid":"GO:0016093","terms_by_termid":{"GO:0006488":null,"GO:0016095":null,"GO:0019408":null}}


id: PBO:0113395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pyridoxal kinase; a key enzyme involved in pyridoxal 5'-phosphate synthesis, the active form of vitamin B6; required for genome integrity; involved in bud-site selection; localizes to cytosol and peroxisomes; similarity to yeast BUD17 and human pyridoxal kinase (PDXK)","termid":"PBO:0113395"}


id: FYPO:0004651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a secondary septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased septum thickness","termid":"FYPO:0006900"},{"relation_name":"output_of","term_name":"abnormal secondary cell septum biogenesis","termid":"FYPO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased secondary cell septum thickness","synonyms":[{"name":"decreased secondary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased secondary cell septum thickness during vegetative growth","type":"exact"},{"name":"decreased secondary septum thickness","type":"exact"},{"name":"reduced secondary cell septum thickness","type":"exact"},{"name":"thin secondary septum","type":"exact"}],"termid":"FYPO:0004651"}


id: GO:0055061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent or trivalent inorganic anions within an organism or cell.","definition_xrefs":["GOC:ai","GOC:jid","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete di-, tri-valent inorganic anion homeostasis (obsolete GO:0055061)","synonyms":[{"name":"di-, tri-valent inorganic anion homeostasis","type":"exact"}],"termid":"GO:0055061"}


id: GO:0106037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region that lies just beneath the plasma membrane in the middle of the apical edge of a cell.","definition_xrefs":["PMID:28263180","PMID:23831726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical cortex","termid":"GO:0045179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"apicomedial cortex","synonyms":[{"name":"medioapical cortex","type":"exact"}],"termid":"GO:0106037"}


id: PBO:0057451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR570 host gene","termid":"PBO:0057451"}


id: PBO:0083155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF SYG1/YIL047C","termid":"PBO:0083155"}


id: PBO:0027270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues","termid":"PBO:0027270"}


id: GO:0033627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits.","definition_xrefs":["GOC:add","PMID:12213832","PMID:14754902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion mediated by integrin","synonyms":[{"name":"cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033627"}


id: PBO:0088799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein SF3B1","termid":"PBO:0088799"}


id: PBO:0003129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh4 (predicted)","termid":"PBO:0003129"}


id: PBO:0040528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-2-microglobulin","termid":"PBO:0040528"}


id: PBO:0054684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2092","termid":"PBO:0054684"}


id: PBO:0080673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP homolog associated with actin, golgi membranes and microtubules","termid":"PBO:0080673"}


id: PBO:0028852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_UV","termid":"PBO:0028852"}


id: GO:0010361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which blue light modulates the frequency, rate or extent of anion channel activity.","definition_xrefs":["GOC:dph","PMID:17319842","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anion channel activity","termid":"GO:0010359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of anion channel activity by blue light","synonyms":[{"name":"regulation by blue light of anion channel activity","type":"exact"}],"termid":"GO:0010361"}


id: GO:0060051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the glycosylation of one or more amino acid residues within a protein. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:pr","GOC:dms","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein glycosylation","termid":"GO:0060049"},{"relation_name":"negatively_regulates","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"negative regulation of protein glycosylation","synonyms":[{"name":"negative regulation of protein amino acid glycosylation","type":"exact"}],"termid":"GO:0060051"}


id: PBO:0069742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1023, pseudogene","termid":"PBO:0069742"}


id: PBO:0059064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 3C","termid":"PBO:0059064"}


id: FYPO:0005362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture is abnormal during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["GO:1990942","PMID:18256284","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0000337","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic metaphase chromosome recapture","synonyms":[{"name":"abnormal chromosome recapture during mitotic metaphase","type":"exact"},{"name":"abnormal kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"abnormal mitotic kinetochore retrieval","type":"exact"},{"name":"abnormal mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"abnormal mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"abnormal mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0005362"}


id: PBO:0090036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3844 family transmembrane protein, conserved in fungi","termid":"PBO:0090036"}


id: GO:0009978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 13(S)-hydroperoxylinolenate = 12,13(S)-epoxylinolenate + H2O.","definition_xrefs":["MetaCyc:RXN1F-19","PMID:9778849","EC:4.2.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"allene oxide synthase activity","secondary_identifiers":["GO:0047987","RHEA:25074"],"synonyms":[{"name":"(9Z,11E,14Z)-(13S)-hydroperoxyoctadeca-9,11,14-trienoate 12,13-hydro-lyase [(9Z)-(13S)-12,13-epoxyoctadeca-9,11-dienoate-forming]","type":"related"},{"name":"(9Z,11E,14Z)-(13S)-hydroperoxyoctadeca-9,11,14-trienoate 12,13-hydro-lyase activity","type":"related"},{"name":"HPI","type":"related"},{"name":"hydroperoxide dehydratase activity","type":"related"},{"name":"hydroperoxide isomerase activity","type":"related"},{"name":"linoleate hydroperoxide isomerase","type":"related"},{"name":"linoleic acid hydroperoxide isomerase","type":"related"}],"termid":"GO:0009978"}


id: GO:0000246
data:
  {"annotated_genes":["SJAG_03024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88672],"is_not":false,"summary":null,"term":"GO:0000246"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ergosterol + NADP+ = ergosta-5,7,22,24(24(1))-tetraen-3beta-ol + H+ + NADPH.","definition_xrefs":["EC:1.3.1.71","RHEA:18501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"delta24(24-1) sterol reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.3.1.71-RXN","KEGG_REACTION:R05641"],"synonyms":[{"name":"C-24(28) sterol reductase activity","type":"related"},{"name":"D24(24-1)-sterol reductase activity","type":"exact"},{"name":"delta24(241)-sterol reductase activity","type":"related"},{"name":"ergosterol:NADP+ delta24(241)-oxidoreductase activity","type":"related"},{"name":"sterol Delta(24(28))-methylene reductase activity","type":"related"},{"name":"sterol Delta(24(28))-reductase activity","type":"related"},{"name":"sterol delta-24(28) methylene reductase activity","type":"exact"},{"name":"sterol delta-24(28) reductase activity","type":"exact"},{"name":"sterol delta24(28)-methylene reductase activity","type":"related"},{"name":"sterol delta24(28)-reductase activity","type":"related"}],"termid":"GO:0000246","terms_by_termid":{"GO:0000246":null}}


id: GO:0018221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoyl group to an oxygen (O) atom in a serine residue to form peptidyl-O-palmitoyl-L-serine.","definition_xrefs":["RESID:AA0080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"protein palmitoylation","termid":"GO:0018345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine palmitoylation","synonyms":[{"name":"peptidyl-serine O-palmitoylation","type":"exact"}],"termid":"GO:0018221"}


id: GO:0045905
data:
  {"annotated_genes":["SJAG_02812","SJAG_05265","SJAG_02189"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65773,67495,90944],"is_not":false,"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translational termination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational termination","termid":"GO:0006449"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"positively_regulates","term_name":"translational termination","termid":"GO:0006415"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02812":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational termination","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of translational termination","type":"narrow"},{"name":"stimulation of translational termination","type":"narrow"},{"name":"up regulation of translational termination","type":"exact"},{"name":"up-regulation of translational termination","type":"exact"},{"name":"upregulation of translational termination","type":"exact"}],"termid":"GO:0045905","terms_by_termid":{"GO:0045905":null}}


id: GO:0048097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism, at the level of transcription or post-transcription, maintaining gene activation in the long-term.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete long-term maintenance of gene activation (obsolete GO:0048097)","termid":"GO:0048097"}


id: GO:0008410
data:
  {"annotated_genes":["SJAG_02769","SJAG_02985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87578,75613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008775"},{"annotations":[87580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008260"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a coenzyme A (CoA) group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"CoA-transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.8.3.-","Reactome:R-HSA-70713"],"termid":"GO:0008410","terms_by_termid":{"GO:0008260":null,"GO:0008775":null}}


id: PBO:0086464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative methyltransferase; may interact with ribosomes, based on co-purification experiments; predicted to be involved in ribosome biogenesis; null mutant is resistant to fluconazole; GFP-fusion protein localizes to the nucleolus; YGR283C has a paralog, YMR310C, that arose from the whole genome duplication","termid":"PBO:0086464"}


id: PBO:0048689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIPR1 like 1","termid":"PBO:0048689"}


id: SO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methylaminomethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylaminomethyluridine","secondary_identifiers":["RNAMOD:072"],"synonyms":[{"name":"5-methylaminomethyluridine","type":"exact"},{"name":"five methylaminomethyluridine","type":"exact"},{"name":"mnm5U","type":"exact"}],"termid":"SO:0001364"}


id: GO:2000713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000713)","synonyms":[{"name":"negative regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000713"}


id: PBO:0077122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMP metallopeptidase inhibitor 1","termid":"PBO:0077122"}


id: GO:0034034
data:
  {"annotated_genes":["SJAG_02247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a purine nucleoside bisphosphate, a compound consisting of a purine base linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate catabolic process","termid":"GO:0033869"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate metabolic process","termid":"GO:0034032"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside bisphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside bisphosphate breakdown","type":"exact"},{"name":"purine nucleoside bisphosphate catabolism","type":"exact"},{"name":"purine nucleoside bisphosphate degradation","type":"exact"}],"termid":"GO:0034034","terms_by_termid":{"GO:0015938":null}}


id: PBO:0069862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1149, pseudogene","termid":"PBO:0069862"}


id: GO:0052055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the function of a host protein via a direct interaction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host molecular function (obsolete GO:0052055)","synonyms":[{"name":"modification by symbiont of host molecular function","type":"exact"},{"name":"modification by symbiont of host protein function","type":"exact"}],"termid":"GO:0052055"}


id: PBO:0070701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 5","termid":"PBO:0070701"}


id: SO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a region from another species.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foreign","termid":"SO:0000784"}


id: PBO:0087110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal RNA processing element (RRPE)-binding protein; involved in the glucose-induced transition from quiescence to growth; restricted to nucleus in quiescent cells, released into cytoplasm after glucose repletion; binds Sin3p; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087110"}


id: GO:0061885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of mini excitatory postsynaptic potential. Mini excitatory postsynaptic potential is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell, induced by the spontaneous release of a single vesicle of an excitatory neurotransmitter into the synapse.","definition_xrefs":["PMID:20395454","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mini excitatory postsynaptic potential","termid":"GO:0061884"},{"relation_name":"is_a","term_name":"positive regulation of excitatory postsynaptic potential","termid":"GO:2000463"},{"relation_name":"positively_regulates","term_name":"mini excitatory postsynaptic potential","termid":"GO:0098816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mini excitatory postsynaptic potential","termid":"GO:0061885"}


id: GO:0006914
data:
  {"annotated_genes":["SJAG_03100","SJAG_02655","SJAG_03851","SJAG_01135","SJAG_04435","SJAG_04496","SJAG_01283","SJAG_05184","SJAG_00824","SJAG_00029","SJAG_00355","SJAG_04963","SJAG_01722","SJAG_02433","SJAG_05245","SJAG_01716","SJAG_04552","SJAG_06309","SJAG_01415","SJAG_04023","SJAG_04837","SJAG_04232","SJAG_01382","SJAG_04860","SJAG_05017","SJAG_01467","SJAG_00115","SJAG_00763","SJAG_01561","SJAG_02723","SJAG_01876","SJAG_04991","SJAG_04502","SJAG_00169","SJAG_02315","SJAG_00820","SJAG_05289","SJAG_00284","SJAG_00059","SJAG_02765","SJAG_03170","SJAG_03136","SJAG_02441","SJAG_04021","SJAG_02100","SJAG_01080","SJAG_03435","SJAG_00724","SJAG_02699","SJAG_00457","SJAG_03718","SJAG_00053","SJAG_04294","SJAG_03467","SJAG_00850","SJAG_01184","SJAG_04655","SJAG_01783","SJAG_03345","SJAG_02432","SJAG_05000","SJAG_02414","SJAG_00704","SJAG_00380","SJAG_02539","SJAG_05210","SJAG_00114","SJAG_01251","SJAG_03371","SJAG_01509","SJAG_01274","SJAG_02663","SJAG_04759","SJAG_02525","SJAG_02640","SJAG_05346","SJAG_05261","SJAG_04219","SJAG_00732","SJAG_00004","SJAG_00645","SJAG_04249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85769,88250,90455,91657,93776,103755,104688,113026],"is_not":false,"summary":null,"term":"GO:0006914"},{"annotations":[87749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035973"},{"annotations":[99726,105899,93732,94018,100723,84005,113925,89033,90952,96110,86233,109781,92778,109976,71657,87750,88749,107818,90765],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000045"},{"annotations":[86234,109782,85413],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097352"},{"annotations":[90766],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[99727,91584,105900,104776,94741,93747,86235,109783,96416,71658,107819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000422"},{"annotations":[93748,96417,104777,93733,96111,84006,94742,98266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030242"},{"annotations":[104778,86236,105901,96418,93749,94743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[94019,101080,104691,94744,87751,96419,105958,96112,98668,97255,106795,107645,101012,93735,90768,99728,90953,105938,88751,111289,86237,95244,113926,89662,89034,93750,84007,99877,105556,93460,109784,107820,106405,104780,98268,90054,105902,84838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016236"},{"annotations":[110642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016237"},{"annotations":[87752,94020,95830,96113,90769,84008,100948,111351,106796,91108,113927,85209,89035,88752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[105392,114470],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010507"},{"annotations":[102776],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0016242"},{"annotations":[94745,95533,93751,96420,104692,105903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044804"},{"annotations":[90385,87753,95831,99729,71656,96114,100949,94021,107821,90058,86238,84009,113928,104781,104333,112356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"},{"annotations":[104693,104782],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000786"},{"annotations":[93765],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[95577,105809,110707,90312,107087,103527,107974,95011],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010508"},{"annotations":[67926],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903599"},{"annotations":[102377,94151],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0016239"},{"annotations":[85674],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140501"},{"annotations":[71659,67577,94697,113929],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010506"},{"annotations":[111352,99730,113930,71665,86560,96115,100951,104783,106797,95534,95833,112732,100508,104694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061709"},{"annotations":[109680,96116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034517"}]},"cv_name":"biological_process","definition":"The cellular catabolic process in which cells digest cellular materials, such as organelles and other macromolecular constituents, or non-self materials such as intracellular pathogens. Autophagy serves to provide essential nutrients under conditions of cellular stress; or can remodel intracellular structures during cell differentiation.","definition_xrefs":["PMID:9412464","PMID:11099404","ISBN:0198547684","PMID:29455577","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"process utilizing autophagic mechanism","termid":"GO:0061919"}],"gene_count":82,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00029":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_00114":null,"SJAG_00115":null,"SJAG_00169":null,"SJAG_00284":null,"SJAG_00355":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00645":null,"SJAG_00704":null,"SJAG_00724":null,"SJAG_00732":null,"SJAG_00763":null,"SJAG_00820":null,"SJAG_00824":null,"SJAG_00850":null,"SJAG_01080":null,"SJAG_01135":null,"SJAG_01184":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01415":null,"SJAG_01467":null,"SJAG_01509":null,"SJAG_01561":null,"SJAG_01716":null,"SJAG_01722":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02100":null,"SJAG_02315":null,"SJAG_02414":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02441":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02663":null,"SJAG_02699":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03371":null,"SJAG_03435":null,"SJAG_03467":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04249":null,"SJAG_04294":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04655":null,"SJAG_04759":null,"SJAG_04837":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05000":null,"SJAG_05017":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05261":null,"SJAG_05289":null,"SJAG_05346":null,"SJAG_06309":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"autophagy","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016238","Wikipedia:Autophagy_(cellular)"],"termid":"GO:0006914","terms_by_termid":{"GO:0000045":null,"GO:0000422":null,"GO:0000423":null,"GO:0006914":null,"GO:0010506":null,"GO:0010507":null,"GO:0010508":null,"GO:0016236":null,"GO:0016237":null,"GO:0016239":null,"GO:0016240":null,"GO:0016242":null,"GO:0030242":null,"GO:0034517":null,"GO:0034727":null,"GO:0035973":null,"GO:0044804":null,"GO:0061709":null,"GO:0061723":null,"GO:0097352":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: GO:0050452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + glutathione + NADP+ = CoA-glutathione + NADPH + H+.","definition_xrefs":["RHEA:14617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"CoA-glutathione reductase (NADPH) activity","secondary_identifiers":["MetaCyc:COA-GLUTATHIONE-REDUCTASE-NADPH-RXN","EC:1.8.1.10"],"synonyms":[{"name":"CoA-glutathione reductase (NADP) activity","type":"exact"},{"name":"CoA-glutathione reductase activity","type":"broad"},{"name":"NADPH-dependent coenzyme A-SS-glutathione reductase activity","type":"exact"},{"name":"NADPH:CoA-glutathione oxidoreductase activity","type":"exact"},{"name":"coenzyme A disulfide-glutathione reductase activity","type":"broad"},{"name":"coenzyme A glutathione disulfide reductase activity","type":"broad"},{"name":"glutathione:NADP+ oxidoreductase (CoA-acylating)","type":"exact"}],"termid":"GO:0050452"}


id: PBO:0077603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11E","termid":"PBO:0077603"}


id: GO:0071074
data:
  {"annotated_genes":["SJAG_02390"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71041],"is_not":false,"summary":null,"term":"GO:0071074"}]},"cv_name":"molecular_function","definition":"Binding to eukaryotic initiation factor eIF2, a protein complex involved in the initiation of ribosome-mediated translation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation factor binding","termid":"GO:0031369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02390":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"eukaryotic initiation factor eIF2 binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071074","terms_by_termid":{"GO:0071074":null}}


id: PBO:0052078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 3","termid":"PBO:0052078"}


id: GO:1900388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of vesicle-mediated transport.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:18622392"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900388)","synonyms":[{"name":"regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900388"}


id: PBO:0059863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin 1","termid":"PBO:0059863"}


id: FYPO:0006913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ketoconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0000257","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on ketoconazole","synonyms":[{"name":"normal cell population growth in presence of ketoconazole","type":"exact"},{"name":"normal cell population growth on ketoconazole","type":"exact"},{"name":"normal cellular response to ketoconazole","type":"related"},{"name":"normal vegetative cell population growth on ketoconazole","type":"exact"}],"termid":"FYPO:0006913"}


id: GO:0034372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:mah","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle remodeling","termid":"GO:0034370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"very-low-density lipoprotein particle remodeling","synonyms":[{"name":"VDL formation","type":"related"},{"name":"VDL remodeling","type":"exact"},{"name":"VDL remodelling","type":"exact"},{"name":"very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0034372"}


id: GO:0046151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"},{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment catabolic process","synonyms":[{"name":"eye pigment breakdown","type":"exact"},{"name":"eye pigment catabolism","type":"exact"},{"name":"eye pigment degradation","type":"exact"}],"termid":"GO:0046151"}


id: GO:0044693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: trehalose(out) + H+(out) = trehalose(in) + H+(in).","definition_xrefs":["PMID:11136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"trehalose:proton symporter activity","synonyms":[{"name":"trehalose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0044693"}


id: GO:0004364
data:
  {"annotated_genes":["SJAG_00179","SJAG_05181","SJAG_03863"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95410,106724,110009,112252,114844],"is_not":false,"summary":null,"term":"GO:0004364"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.","definition_xrefs":["EC:2.5.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00179":null,"SJAG_03863":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"glutathione transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-176059","Reactome:R-HSA-9026901","MetaCyc:GSHTRAN-RXN","Reactome:R-HSA-9026777","Reactome:R-HSA-9753280","Reactome:R-HSA-5423653","Reactome:R-HSA-3301943","Reactome:R-HSA-9026911","Reactome:R-HSA-176054","Reactome:R-HSA-9026780","Reactome:R-HSA-9748996"],"synonyms":[{"name":"RX:glutathione R-transferase activity","type":"related"},{"name":"S-(hydroxyalkyl)glutathione lyase activity","type":"related"},{"name":"glutathione S-alkyl transferase activity","type":"related"},{"name":"glutathione S-alkyltransferase activity","type":"related"},{"name":"glutathione S-aralkyltransferase activity","type":"related"},{"name":"glutathione S-aryltransferase activity","type":"related"},{"name":"glutathione S-transferase activity","type":"related"},{"name":"glutathione conjugation reaction","type":"exact"}],"termid":"GO:0004364","terms_by_termid":{"GO:0004364":null}}


id: PR:O60093
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ber1 gene.","definition_xrefs":["UniProtKB:O60093","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.13","synonyms":[{"name":"Spom972h-ber1","type":"exact"}],"termid":"PR:O60093"}


id: GO:0030834
data:
  {"annotated_genes":["SJAG_01894","SJAG_00279","SJAG_02700","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95031,110450,88454,84429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of actin filaments by the removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin polymerization or depolymerization","termid":"GO:0008064"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"regulation of actin filament depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin depolymerization","type":"exact"}],"termid":"GO:0030834","terms_by_termid":{"GO:0051016":null}}


id: PBO:0049374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 4","termid":"PBO:0049374"}


id: PBO:0059925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 11","termid":"PBO:0059925"}


id: GO:0052120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in host environment (obsolete GO:0052120)","synonyms":[{"name":"positive aerotaxis in response to host environment","type":"exact"}],"termid":"GO:0052120"}


id: GO:1990410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular adrenomedullin combining with a dimeric adrenomedullin receptor on the surface of the target cell.","definition_xrefs":["GOC:bhm","PMID:10882736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor signaling pathway","termid":"GO:0097646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adrenomedullin receptor signaling pathway","synonyms":[{"name":"AM receptor signaling pathway","type":"exact"}],"termid":"GO:1990410"}


id: PBO:0028215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_arsenate_reductase_activity","termid":"PBO:0028215"}


id: PBO:0088463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sororin, WAPL antagonist Sor1","termid":"PBO:0088463"}


id: PBO:0003072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-1,6-bisphosphatase Fbp1","termid":"PBO:0003072"}


id: GO:0035161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and/or maintenance of a lineage boundary between compartments in an imaginal disc that cells cannot cross, thus separating the populations of cells in each compartment.","definition_xrefs":["PMID:10625531","PMID:9374402","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"imaginal disc pattern formation","termid":"GO:0007447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc lineage restriction","termid":"GO:0035161"}


id: GO:0097358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-leucyl-tRNA(Leu) = D-leucine + tRNA(Leu). Hydrolysis of the removal of D-leucine from residues in charged tRNA(Leu).","definition_xrefs":["PMID:10918062","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-aminoacyl-tRNA deacylase activity","termid":"GO:0051499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0016788","GO:0003824","GO:0016787","GO:0140101"],"is_obsolete":false,"name":"D-leucyl-tRNA(Leu) deacylase activity","termid":"GO:0097358"}


id: FYPO:0001118
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115579,115567,115561],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001122"},{"annotations":[115508],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[115190,115588,115191,115194],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0000648"},{"annotations":[115339,115302,115307,115313],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"},{"annotations":[115193,115199,115192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[115197,115198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A 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aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vegetative cell morphology","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_03453","SJAG_04522","SJAG_01794","SJAG_03048","SJAG_02013","SJAG_02592","SJAG_04332","SJAG_00514","SJAG_04280","SJAG_02819","SJAG_00028","SJAG_00266","SJAG_03581","SJAG_04312"],"single_locus_genotype_uniquenames":["wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","ras1delta","sty1delta","pka1delta","scd1delta","rga6delta","rga4delta","atf1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","pyp1delta","efc25delta","scd2delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","gef1delta"],"synonyms":[{"name":"abnormal cell morphology during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001118","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0044958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHRS4 antisense RNA 1","termid":"PBO:0044958"}


id: GO:0102191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-carboxy-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) = 5alpha-cholesta-7,24-dien-3-one + NADH(2-) + carbon dioxide.","definition_xrefs":["GOC:pz","RHEA:59016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4alpha-carboxy-5alpha-cholesta-7,24-dien-3beta-ol dehydrogenase/C4-decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-11959","EC:1.1.1.418"],"termid":"GO:0102191"}


id: PBO:0041961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen and calcium binding EGF domains 1","termid":"PBO:0041961"}


id: PBO:0027563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_during_meiosis","termid":"PBO:0027563"}


id: PBO:0065538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine synthase 2","termid":"PBO:0065538"}


id: PBO:0086195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that activates Rub1p (NEDD8) before neddylation; acts together with Uba3p; may play a role in protein degradation","termid":"PBO:0086195"}


id: PBO:0061318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member A3","termid":"PBO:0061318"}


id: PBO:0051141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-19 (pseudogene)","termid":"PBO:0051141"}


id: GO:0014878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus. This process occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus involved in regulation of muscle adaptation","termid":"GO:0014874"},{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to electrical stimulus involved in regulation of muscle adaptation","synonyms":[{"name":"response to electrical stimulus involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014878"}


id: PBO:0047147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 181 member A","termid":"PBO:0047147"}


id: PBO:0011118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A regulator, PTPA family Ypa2","termid":"PBO:0011118"}


id: GO:0006204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of IMP, inosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate catabolic process","termid":"GO:0009169"},{"relation_name":"is_a","term_name":"IMP metabolic process","termid":"GO:0046040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"IMP catabolic process","synonyms":[{"name":"IMP breakdown","type":"exact"},{"name":"IMP catabolism","type":"exact"},{"name":"IMP degradation","type":"exact"}],"termid":"GO:0006204"}


id: PATO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's containing excess lipid.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty","termid":"PATO:0002114"}


id: GO:0080093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of photorespiration. Photorespiration is a light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"photorespiration","termid":"GO:0009853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photorespiration","termid":"GO:0080093"}


id: PBO:0075851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2B","termid":"PBO:0075851"}


id: GO:1904961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the quiescent center. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:TermGenie","PMID:21233333","GO_REF:0000084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quiescent center organization","synonyms":[{"name":"quiescent center structural organization","type":"exact"}],"termid":"GO:1904961"}


id: PBO:0087819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (40 kDa); involved in RNA polymerase II transcription initiation, similar to histone H3 with atypical histone fold motif of Spt3-like transcription factors","termid":"PBO:0087819"}


id: GO:1905433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:19448629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"regulation of retrograde trans-synaptic signaling by neuropeptide","termid":"GO:1905432"},{"relation_name":"negatively_regulates","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of retrograde trans-synaptic signaling by neuropeptide","synonyms":[{"name":"down regulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"down-regulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"downregulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"inhibition of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"},{"name":"inhibition of retrograde trans-synaptic signaling by neuropeptide","type":"narrow"},{"name":"negative regulation of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"}],"termid":"GO:1905433"}


id: PBO:0087318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methylmethionine-homocysteine methyltransferase; functions along with Sam4p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio","termid":"PBO:0087318"}


id: PBO:0045293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 45","termid":"PBO:0045293"}


id: PBO:0005589
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates genes involved in nitrogen metabolism","termid":"PBO:0005589"}


id: PBO:0110159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNAse Z, nuclear 3'-tRNA processing endonuclease Trz1","termid":"PBO:0110159"}


id: PBO:0070893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 1","termid":"PBO:0070893"}


id: GO:1902525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein monoubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:21931591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"regulates","term_name":"protein monoubiquitination","termid":"GO:0006513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein monoubiquitination","synonyms":[{"name":"regulation of protein monoubiquitinylation","type":"exact"},{"name":"regulation of protein monoubiquitylation","type":"exact"}],"termid":"GO:1902525"}


id: PBO:0041002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BORA aurora kinase A activator","termid":"PBO:0041002"}


id: PBO:0068156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 463","termid":"PBO:0068156"}


id: PBO:0064005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 39","termid":"PBO:0064005"}


id: PBO:0003103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle transcriptional repressor Whi5 (predicted)","termid":"PBO:0003103"}


id: PBO:0068182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 489","termid":"PBO:0068182"}


id: PBO:0002128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein phosphatase (predicted)","termid":"PBO:0002128"}


id: GO:1902266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of abscisic acid within a cell.","definition_xrefs":["PMID:23252460","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"abscisic acid homeostasis","termid":"GO:1902265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular abscisic acid homeostasis","synonyms":[{"name":"cellular 2-cis-abscisate homeostasis","type":"exact"},{"name":"cellular ABA homeostasis","type":"related"}],"termid":"GO:1902266"}


id: PBO:0078784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 9-1","termid":"PBO:0078784"}


id: GO:0032095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to a food stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"response to food","termid":"GO:0032094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to food","termid":"GO:0032095"}


id: GO:0120211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of proacrosomal vesicle with the membrane of another proacrosomal vesicle to form the acrosome.","definition_xrefs":["GOC:krc","PMID:29991750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"acrosome assembly","termid":"GO:0001675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0016192","GO:0006810","GO:0044085"],"is_obsolete":false,"name":"proacrosomal vesicle fusion","termid":"GO:0120211"}


id: GO:0050582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xylitol + O2 = xylose + H2O2.","definition_xrefs":["EC:1.1.3.41","MetaCyc:1.1.3.41-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"xylitol oxidase activity","synonyms":[{"name":"xylitol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050582"}


id: PBO:0083866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box component of an SCF ubiquitin protein ligase complex; associates with and is required for Fzo1p ubiquitination and for mitochondria fusion; stimulates nuclear export of specific mRNAs; promotes ubiquitin-mediated degradation of Gal4p in some strains","termid":"PBO:0083866"}


id: PBO:0043382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clusterin like 1","termid":"PBO:0043382"}


id: GO:0052375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism avoids the effects of nitric oxide produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance by organism of symbiont-produced nitric oxide (obsolete GO:0052375)","synonyms":[{"name":"evasion or tolerance by organism of symbiont NO","type":"exact"},{"name":"evasion or tolerance by organism of symbiont nitric oxide","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced NO","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced nitric oxide","type":"exact"},{"name":"evasion or tolerance of NO produced by symbiont in response to organism","type":"exact"},{"name":"evasion or tolerance of nitric oxide produced by symbiont in response to organism","type":"exact"}],"termid":"GO:0052375"}


id: GO:0005596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XIV) chains; type XIV collagen triple helices may link sheet-forming or fibrillar collagens to other structures.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"},{"relation_name":"is_a","term_name":"anchoring collagen complex","termid":"GO:0030934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XIV trimer","termid":"GO:0005596"}


id: GO:0030626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U12 small nuclear RNA (U12 snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"U12 snRNA binding","termid":"GO:0030626"}


id: GO:0006584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catecholamine metabolic process","synonyms":[{"name":"catecholamine metabolism","type":"exact"}],"termid":"GO:0006584"}


id: GO:0090192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:dph","GOC:yaf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"regulates","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glomerulus development","termid":"GO:0090192"}


id: PBO:0072707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 2A","termid":"PBO:0072707"}


id: PBO:0080558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 2 pseudogene 1","termid":"PBO:0080558"}


id: PBO:0065698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 3","termid":"PBO:0065698"}


id: GO:0080167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a karrikin stimulus. Karrikins are signaling molecules in smoke from burning vegetation that trigger seed germination for many angiosperms (flowering plants).","definition_xrefs":["PMID:20351290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to karrikin","termid":"GO:0080167"}


id: PBO:0090364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GAP Hba1","termid":"PBO:0090364"}


id: PBO:0000159
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.6.99.1","termid":"PBO:0000159"}


id: PR:Q10072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H1.06c gene.","definition_xrefs":["UniProtKB:Q10072","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C3H1.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.06c","synonyms":[{"name":"Spom972h-SPAC3H1.06c","type":"exact"}],"termid":"PR:Q10072"}


id: GO:1903316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nitrogen cycle metabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"positively_regulates","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0071941","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitrogen cycle metabolic process","synonyms":[{"name":"activation of nitrogen cycle metabolic process","type":"narrow"},{"name":"up regulation of nitrogen cycle metabolic process","type":"exact"},{"name":"up-regulation of nitrogen cycle metabolic process","type":"exact"},{"name":"upregulation of nitrogen cycle metabolic process","type":"exact"}],"termid":"GO:1903316"}


id: PBO:0075969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 9","termid":"PBO:0075969"}


id: PBO:0040538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 5","termid":"PBO:0040538"}


id: PBO:0011462
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.958","termid":"PBO:0011462"}


id: GO:0050665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"reactive oxygen species biosynthetic process","termid":"GO:1903409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide biosynthetic process","synonyms":[{"name":"H2O2 biosynthetic process","type":"exact"},{"name":"hydrogen peroxide anabolism","type":"exact"},{"name":"hydrogen peroxide biosynthesis","type":"exact"},{"name":"hydrogen peroxide formation","type":"exact"},{"name":"hydrogen peroxide generation","type":"exact"},{"name":"hydrogen peroxide synthesis","type":"exact"}],"termid":"GO:0050665"}


id: GO:0106093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant complex involved in basal disease resistance and resistance (R) gene-mediated effector triggered immunity (ETI). Regulates accumulation of the hormone salicylic acid (SA) which is a necessary component of systemic immunity. Involved in responds to bacteria, viruses and oomycetes.","definition_xrefs":["GOC:bhm","PMID:16040633","PMID:11574472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"EDS1 disease-resistance complex","synonyms":[{"name":"EDS1-PAD4 complex","type":"narrow"},{"name":"EDS1-PAD4-SAG101 complex","type":"narrow"},{"name":"EDS1-SAG101 complex","type":"narrow"}],"termid":"GO:0106093"}


id: PBO:0042522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 2","termid":"PBO:0042522"}


id: PBO:0004065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR33","termid":"PBO:0004065"}


id: PBO:0042431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC37L1 divergent transcript","termid":"PBO:0042431"}


id: PBO:0041311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 50","termid":"PBO:0041311"}


id: PBO:0054669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2075","termid":"PBO:0054669"}


id: GO:0061094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of turning behavior involved in mating. Turning behavior is the sharp ventral turn performed by the male as he approaches either the hermaphrodite head or tail, whilst trying to locate his partner's vulva. Turning occurs via a sharp ventral coil of the male's tail.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of male mating behavior","termid":"GO:1902435"},{"relation_name":"regulates","term_name":"turning behavior involved in mating","termid":"GO:0034607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of turning behavior involved in mating","termid":"GO:0061094"}


id: PBO:0049597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 15","termid":"PBO:0049597"}


id: PBO:0046384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EOLA1 divergent transcript","termid":"PBO:0046384"}


id: PATO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's being interrupted of its normal course.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted","termid":"PATO:0001507"}


id: GO:0050533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol hexakisphosphate + H2O = 1D-myo-inositol 1,2,3,4,6-pentakisphosphate + phosphate.","definition_xrefs":["RHEA:13001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-phytase activity","secondary_identifiers":["MetaCyc:3.1.3.72-RXN","EC:3.1.3.72"],"synonyms":[{"name":"myo-inositol-hexakisphosphate 5-phosphohydrolase activity","type":"related"}],"termid":"GO:0050533"}


id: GO:0015243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cycloheximide from one side of a membrane to the other. Cycloheximide is an antibiotic produced by Streptomyces which interferes with protein synthesis in eukaryotes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"cycloheximide transmembrane transporter activity","synonyms":[{"name":"cycloheximide transporter activity","type":"related"}],"termid":"GO:0015243"}


id: MOD:00396
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen atom on an oxygen with a carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-glycosylated residue","synonyms":[{"name":"OGlycoRes","type":"exact"}],"termid":"MOD:00396"}


id: PBO:0058086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4303","termid":"PBO:0058086"}


id: GO:1903158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any L-glutamate transmembrane transporter activity that is involved in L-glutamate import into cell.","definition_xrefs":["GOC:TermGenie","ISBN:0-8249-3695-6","GO_REF:0000061","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete L-glutamate transmembrane transporter activity involved in L-glutamate import into cell (obsolete GO:1903158)","synonyms":[{"name":"L-glutamate transmembrane transporter activity involved in L-glutamate import into cell","type":"exact"},{"name":"glutamate/aspartate porter activity involved in L-glutamate import into cell","type":"narrow"},{"name":"glutamate/aspartate:sodium symporter activity involved in L-glutamate import into cell","type":"narrow"}],"termid":"GO:1903158"}


id: PBO:0030302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_activation_of_bipolar_cell_growth","termid":"PBO:0030302"}


id: PBO:0066255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 3","termid":"PBO:0066255"}


id: GO:0004479
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87138],"is_not":false,"summary":null,"term":"GO:0004479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA.","definition_xrefs":["EC:2.1.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0140098","GO:0003824","GO:0016740","GO:0140101"],"is_obsolete":false,"name":"methionyl-tRNA formyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070128","GO:0001718","Reactome:R-HSA-5389841","MetaCyc:METHIONYL-TRNA-FORMYLTRANSFERASE-RXN","RHEA:24380"],"synonyms":[{"name":"10-formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase activity","type":"related"},{"name":"N(10)-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"N-terminal peptidyl-methionine N-formylation","type":"related"},{"name":"N10-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"conversion of met-tRNAf to fmet-tRNA","type":"related"},{"name":"conversion of mitochondrial met-tRNAf to fmet-tRNA","type":"related"},{"name":"formylmethionyl-transfer ribonucleic synthetase activity","type":"related"},{"name":"methionyl ribonucleic formyltransferase activity","type":"related"},{"name":"methionyl-tRNA Met formyltransferase activity","type":"related"},{"name":"methionyl-tRNA transformylase activity","type":"related"},{"name":"methionyl-transfer RNA transformylase activity","type":"related"},{"name":"methionyl-transfer ribonucleate methyltransferase activity","type":"related"},{"name":"methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"mitochondrial N-terminal peptidyl-methionine N-formylation","type":"related"}],"termid":"GO:0004479","terms_by_termid":{"GO:0004479":null}}


id: GO:0048514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of blood vessels are generated and organized. The blood vessel is the vasculature carrying blood.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel morphogenesis","termid":"GO:0048514"}


id: PBO:0073002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 3","termid":"PBO:0073002"}


id: PBO:0040246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4A cysteine peptidase pseudogene 1","termid":"PBO:0040246"}


id: PBO:0017063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug46","termid":"PBO:0017063"}


id: PBO:0078013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 3","termid":"PBO:0078013"}


id: GO:0140368
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex that recognizes, binds and sequesters a specific receptor ligand to prevent it from binding to its regular receptor. May be soluble or membrane bound.","definition_xrefs":["PMID:9168977","PMID:30621730","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"decoy receptor complex","synonyms":[{"name":"osteoclastogenesis inhibitory factor","type":"narrow"},{"name":"osteoprotegerin complex","type":"narrow"}],"termid":"GO:0140368"}


id: PBO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses frp1","termid":"PBO:0000367"}


id: PBO:0077531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 244","termid":"PBO:0077531"}


id: PBO:0088044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme involved in ERAD; located at the cytosolic side of the ER membrane; tail region contains a transmembrane segment at the C-terminus; substrate of the ubiquitin-proteasome pathway; ER-associated protein degradation is also known as ERAD","termid":"PBO:0088044"}


id: GO:0021896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an astrocyte residing in the forebrain. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GOC:jid","PMID:16226447","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte differentiation","termid":"GO:0048708"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain astrocyte differentiation","termid":"GO:0021896"}


id: GO:0019448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"cysteine catabolic process","termid":"GO:0009093"},{"relation_name":"is_a","term_name":"L-cysteine metabolic process","termid":"GO:0046439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"L-cysteine catabolic process","synonyms":[{"name":"L-cysteine breakdown","type":"exact"},{"name":"L-cysteine catabolism","type":"exact"},{"name":"L-cysteine degradation","type":"exact"}],"termid":"GO:0019448"}


id: PBO:0059349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S15","termid":"PBO:0059349"}


id: PBO:0066856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 156","termid":"PBO:0066856"}


id: PBO:0091859
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the S. japonicus gene is about 500 amino acids longer...possibly a gene merge in S. japonicus as this does not splice to adjacent gene","termid":"PBO:0091859"}


id: GO:0060185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The opening and spreading out of the outer ear.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"outer ear morphogenesis","termid":"GO:0042473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer ear unfolding","termid":"GO:0060185"}


id: PBO:0085502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein co-chaperone with a zinc finger motif; essential for protein import into mitochondria; may act with Pam18p to facilitate recognition and folding of imported proteins by Ssc1p (mtHSP70) in the mitochondrial matrix; required for the maintenance of Ssc1p solubility and assists in the functional interaction of Ssc1p with substrate proteins","termid":"PBO:0085502"}


id: FYPO:0003729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nuclear periphery is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to nuclear periphery","synonyms":[{"name":"ectopic protein localization to nuclear periphery","type":"exact"},{"name":"protein mislocalised to nuclear periphery","type":"exact"},{"name":"protein mislocalised to nuclear periphery during vegetative growth","type":"exact"},{"name":"protein mislocalized to nuclear periphery during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003729"}


id: SO:0001484
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An X element combinatorial repeat is a repeat region located between the X element and the telomere or adjacent Y' element.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"telomere","termid":"SO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X_element_combinatorial_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:x_element_combinatorial_repeat","type":"exact"},{"name":"X element combinatorial repeat","type":"exact"}],"termid":"SO:0001484"}


id: GO:0021974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in spinal cord towards target cells in the thalamus. This axonal process is a member of those that make up the trigeminothalamic tract, one of the major routes of nociceptive and temperature signaling from the face.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021","GOC:cls","ISBN:0878937420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminothalamic tract morphogenesis","termid":"GO:0021974"}


id: PATO:0000567
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000567 absolute height value (obsolete PATO:0000567)","termid":"PATO:0000567"}


id: FYPO:0005903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins, but stops before the ring completely constricts and is disassembled.","definition_xrefs":["PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0000631"],"is_obsolete":false,"name":"incomplete actomyosin contractile ring contraction","synonyms":[{"name":"incomplete actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"incomplete actomyosin contractile ring contraction during vegetative growth","type":"exact"}],"termid":"FYPO:0005903"}


id: PBO:0056144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate receptor, cation dependent","termid":"PBO:0056144"}


id: PBO:0056484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATR3 pseudogene 1","termid":"PBO:0056484"}


id: GO:1904311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gold(3+) stimulus.","definition_xrefs":["GOC:TermGenie","PMID:16206274","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gold(3+)","termid":"GO:1904311"}


id: PBO:0091210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large subunit ribosomal RNA","termid":"PBO:0091210"}


id: PBO:0083975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-repressible alcohol dehydrogenase II; catalyzes the conversion of ethanol to acetaldehyde; involved in the production of certain carboxylate esters; regulated by ADR1","termid":"PBO:0083975"}


id: PBO:0065744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYD and CARD domain containing","termid":"PBO:0065744"}


id: GO:0047714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + 2 H2O = 3-beta-D-galactosyl-sn-glycerol + 2 carboxylates.","definition_xrefs":["EC:3.1.1.26","MetaCyc:GALACTOLIPASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"galactolipase activity","secondary_identifiers":["RHEA:13189"],"synonyms":[{"name":"1,2-diacyl-3-beta-D-galactosyl-sn-glycerol acylhydrolase activity","type":"related"},{"name":"galactolipid acylhydrolase activity","type":"related"},{"name":"galactolipid lipase activity","type":"related"},{"name":"polygalactolipase activity","type":"related"}],"termid":"GO:0047714"}


id: SO:1000159
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby the segment between the first two breaks listed is removed and inserted at the third break; the insertion is in cytologically the same orientation as its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"direct","termid":"SO:0001514"},{"relation_name":"is_a","term_name":"intrachromosomal_transposition","termid":"SO:1000041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninverted_intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)eTp","type":"related"},{"name":"uninverted intrachromosomal transposition","type":"exact"}],"termid":"SO:1000159"}


id: GO:0060950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac glial cell differentiation","termid":"GO:0060950"}


id: PBO:0082476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; role in nutrient-stimulated growth via Ras-cAMP signaling; inhibited by regulatory subunit Bcy1p in cAMPs absence; phosphorylates and inhibits Whi3p to promote G1/S phase passage; phosphorylates Nej1p to regulate nonhomologous end joining (NHEJ); impairs mitochondrial import of pre-Tom40p via phosphorylation under non-respiratory conditions; partially redundant with Tpk2p and Tpk3p; human homolog PRKACB regulates NHEJ via NHEJ1 phosphorylation","termid":"PBO:0082476"}


id: MOD:01356
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3 hydrogen atom of a serine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["PubMed:7856876","Unimod:149#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc1 glycosylated residue","termid":"MOD:00517"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1 O-glycosylated serine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"}],"termid":"MOD:01356"}


id: PBO:0027748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_translation_gene_mRNA_during_nitrogen_starvation","termid":"PBO:0027748"}


id: RO:0002339
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from a an initial location to some destination l.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_transport_to_from_or_in","termid":"RO:0002344"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_target_end_location","termid":"RO:0002339"}


id: PBO:0060766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 10","termid":"PBO:0060766"}


id: GO:2000650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transport","termid":"GO:1902306"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"negative regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000650"}


id: GO:0047824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-iditol + NAD+ = D-sorbose + NADH.","definition_xrefs":["RHEA:12725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"},{"relation_name":"is_a","term_name":"hexitol dehydrogenase activity","termid":"GO:0031320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-iditol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:D-IDITOL-2-DEHYDROGENASE-RXN","EC:1.1.1.15"],"termid":"GO:0047824"}


id: PBO:0018050
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pcn1 does not bind directly to Cdc6","termid":"PBO:0018050"}


id: PBO:0027001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_prospore_membrane","termid":"PBO:0027001"}


id: PR:Q9HDU4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dTDP-D-glucose 4,6-dehydratase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04142","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB2B2.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.11","secondary_identifiers":["UniProtKB:Q9HDU4"],"synonyms":[{"name":"Spom972h-TGDS","type":"exact"}],"termid":"PR:Q9HDU4"}


id: PR:Q65ZA5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19D5.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q65ZA5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19D5.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.10c","synonyms":[{"name":"Spom972h-SPAC19D5.10c","type":"exact"}],"termid":"PR:Q65ZA5"}


id: FYPO:0002322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-farnesyl diphosphate (FPP) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular FPP level","synonyms":[{"name":"decreased cellular 2-trans,6-trans-farnesyl diphosphate level","type":"exact"},{"name":"decreased cellular FPP accumulation","type":"related"},{"name":"decreased cellular FPP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular FPP level during vegetative growth","type":"exact"},{"name":"decreased cellular farnesyl diphosphate level","type":"broad"},{"name":"decreased cellular farnesyl pyrophosphate level","type":"broad"},{"name":"reduced cellular FPP level","type":"exact"}],"termid":"FYPO:0002322"}


id: PBO:0030182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_population","termid":"PBO:0030182"}


id: GO:0031832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 6 serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 6 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 6 receptor binding","type":"exact"},{"name":"type 6 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031832"}


id: GO:0070186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of growth hormone, a peptide hormone that is secreted by the anterior pituitary or the placenta into the circulation, and binds to membrane receptors in target tissues to stimulate body growth.","definition_xrefs":["GOC:BHF","PMID:11445442","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"growth hormone activity","synonyms":[{"name":"GH activity","type":"exact"},{"name":"pituitary growth hormone activity","type":"narrow"},{"name":"placental growth hormone activity","type":"narrow"}],"termid":"GO:0070186"}


id: PBO:0112694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyldihydroxybenzoate methyltransferase Coq3","termid":"PBO:0112694"}


id: GO:1903981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to enterobactin.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","GOC:mr","PMID:21951132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide binding","termid":"GO:0005527"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"enterobactin binding","synonyms":[{"name":"enterochelin binding","type":"exact"},{"name":"siderophore binding","type":"broad"}],"termid":"GO:1903981"}


id: PBO:0061900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid receptor delta 1","termid":"PBO:0061900"}


id: GO:0061513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose 6-phosphate(out) + phosphate(in) = glucose 6-phosphate(in) + phosphate(out).","definition_xrefs":["GOC:dph","PMID:18337460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose-6-phosphate transmembrane transporter activity","termid":"GO:0015152"},{"relation_name":"is_a","term_name":"hexose-phosphate:phosphate antiporter activity","termid":"GO:0015526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glucose 6-phosphate:phosphate antiporter activity","secondary_identifiers":["Reactome:R-HSA-198513","Reactome:R-HSA-3229118","Reactome:R-HSA-3257122","GO:0008524","MetaCyc:TRANS-RXN-33","RHEA:71535"],"synonyms":[{"name":"glucose 6-phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0061513"}


id: PR:O14139
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chromodomain-helicase-DNA-binding protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02234","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase hrp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.01","secondary_identifiers":["UniProtKB:O14139"],"synonyms":[{"name":"ATP-dependent helicase hrp3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CHD2","type":"exact"}],"termid":"PR:O14139"}


id: FYPO:0003429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer, and shorter, cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"},{"relation_name":"is_a","term_name":"short interphase microtubules","termid":"FYPO:0006103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"short interphase microtubules present in decreased numbers","synonyms":[{"name":"short cytoplasmic microtubules present in decreased numbers during interphase of mitotic cell cycle","type":"exact"},{"name":"short cytoplasmic microtubules present in decreased numbers during mitotic interphase","type":"exact"},{"name":"short interphase cytoplasmic microtubules present in decreased numbers","type":"exact"},{"name":"short interphase microtubules present in decreased numbers during vegetative growth","type":"exact"},{"name":"short interphase microtubules present in reduced numbers","type":"exact"}],"termid":"FYPO:0003429"}


id: GO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of the siderochrome enterochelin, a cyclic trimer of 2, 3 dihydroxybenzoylserine from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"enterobactin transmembrane transporter activity","synonyms":[{"name":"enterobactin transporter activity","type":"related"},{"name":"enterochelin transporter activity","type":"exact"}],"termid":"GO:0042931"}


id: GO:0051934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake of catecholamine neurotransmitters by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.","definition_xrefs":["ISBN:0123668387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine uptake","termid":"GO:0090493"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"catecholamine neurotransmitter import into glial cell","type":"narrow"},{"name":"catecholamine neurotransmitter import into neuron","type":"narrow"},{"name":"catecholamine neurotransmitter recycling","type":"broad"},{"name":"catecholamine neurotransmitter reuptake","type":"exact"},{"name":"catecholamine reuptake during transmission of nerve impulse","type":"related"},{"name":"catecholamine uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051934"}


id: PBO:0085866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has similarity to Torpedo californica tCTL1p, which is postulated to be a choline transporter, neither null mutation nor overexpression affects choline transport","termid":"PBO:0085866"}


id: PBO:0077827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member F","termid":"PBO:0077827"}


id: PR:O42930
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps10 gene.","definition_xrefs":["UniProtKB:O42930","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting/targeting protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.06","synonyms":[{"name":"CPY receptor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-vps10","type":"exact"},{"name":"carboxypeptidase Y receptor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sortilin vps10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar carboxypeptidase sorting receptor vps10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42930"}


id: GO:2000914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of galactoglucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of galactoglucomannan catabolic process","termid":"GO:2000912"},{"relation_name":"positively_regulates","term_name":"galactoglucomannan catabolic process","termid":"GO:2000885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of galactoglucomannan catabolic process","synonyms":[{"name":"positive regulation of galactoglucomannan catabolism","type":"exact"}],"termid":"GO:2000914"}


id: FYPO:0007648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is abnormal.","definition_xrefs":["GO:1902682","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin","termid":"FYPO:0004718"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to pericentric heterochromatin","synonyms":[{"name":"abnormal protein localization to centromeric heterochromatin","type":"exact"},{"name":"abnormal protein localization to nuclear centromeric heterochromatin","type":"exact"}],"termid":"FYPO:0007648"}


id: PBO:0063960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 1","termid":"PBO:0063960"}


id: PBO:0031582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_rate","termid":"PBO:0031582"}


id: GO:0050740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine.","definition_xrefs":["RESID:AA0349"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine (obsolete GO:0050740)","termid":"GO:0050740"}


id: PBO:0061693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210 pseudogene 1","termid":"PBO:0061693"}


id: PBO:0076221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT4 homolog, DSIF elongation factor subunit","termid":"PBO:0076221"}


id: PBO:0053804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1061","termid":"PBO:0053804"}


id: PBO:0081231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 11","termid":"PBO:0081231"}


id: GO:1990799
data:
  {"annotated_genes":["SJAG_00358","SJAG_04113"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90404,113087],"is_not":false,"summary":null,"term":"GO:1990799"}]},"cv_name":"biological_process","definition":"The process in which a uridine residue at position 34 in the anticodon of a mitochondrial tRNA is post-transcriptionally thiolated at the C2 position. This process involves transfer of a sulfur from cysteine to position C2 by several steps.","definition_xrefs":["PMID:15509579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble position uridine thiolation","termid":"GO:0002143"},{"relation_name":"is_a","term_name":"mitochondrial tRNA wobble uridine modification","termid":"GO:0070899"},{"relation_name":"is_a","term_name":"mitochondrial tRNA thio-modification","termid":"GO:0070903"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_04113":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0140053","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA wobble position uridine thiolation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990799","terms_by_termid":{"GO:1990799":null}}


id: PBO:0077093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell immunoreceptor with Ig and ITIM domains","termid":"PBO:0077093"}


id: PBO:0086545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR102C is not an essential gene; homozygous diploid deletion strain exhibits high budding index","termid":"PBO:0086545"}


id: GO:0045713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of low-density lipoprotein receptors, cell surface proteins that mediate the endocytosis of low-density lipoprotein particles by cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045713)","synonyms":[{"name":"LDLr biosynthesis","type":"exact"},{"name":"LDLr biosynthetic process","type":"exact"},{"name":"low-density lipoprotein receptor anabolism","type":"exact"},{"name":"low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"low-density lipoprotein receptor formation","type":"exact"},{"name":"low-density lipoprotein receptor synthesis","type":"exact"}],"termid":"GO:0045713"}


id: CHEBI:30351
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,2'-bipyridine","synonyms":[{"name":"2,2-dipyridyl","type":"exact"}],"termid":"CHEBI:30351"}


id: GO:0048883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cluster of a relatively undifferentiated cell originating at specific cephalic placodes and depositing proneuromasts along a developing lateral line, from which the neuromasts will develop.","definition_xrefs":["PMID:15018940","PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"lateral line development","termid":"GO:0048882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast primordium migration","synonyms":[{"name":"lateral line primordium migration","type":"exact"}],"termid":"GO:0048883"}


id: PBO:0005251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brefeldin A efflux transporter Bfr1","termid":"PBO:0005251"}


id: GO:0050206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(hydroxyimino)propanoate + acetone = acetone oxime + pyruvate.","definition_xrefs":["RHEA:11624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"oximinotransferase activity","secondary_identifiers":["KEGG_REACTION:R03796","EC:2.6.3.1","MetaCyc:OXIMINOTRANSFERASE-RXN","GO:0016770"],"synonyms":[{"name":"oximase activity","type":"related"},{"name":"oximinotransaminase activity","type":"related"},{"name":"pyruvate-acetone oximinotransferase activity","type":"related"},{"name":"transoximase activity","type":"related"},{"name":"transoximinase activity","type":"related"}],"termid":"GO:0050206"}


id: PBO:0078854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 2","termid":"PBO:0078854"}


id: PBO:0062516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily K member 2 pseudogene","termid":"PBO:0062516"}


id: PBO:0001812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1749 family protein","termid":"PBO:0001812"}


id: PBO:0083071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroxyacetone kinase; required for detoxification of dihydroxyacetone (DHA); involved in stress adaptation","termid":"PBO:0083071"}


id: GO:0051223
data:
  {"annotated_genes":["SJAG_04343","SJAG_04509","SJAG_01805","SJAG_03048","SJAG_04464","SJAG_01311","SJAG_02592","SJAG_03970","SJAG_01245","SJAG_04312","SJAG_03453","SJAG_00906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[101928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[104861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[96575,89942,97984,107141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[86991,90511,98524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[88151,84074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03970":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051223","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0046827":null,"GO:0070863":null}}


id: PBO:0005752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer zeta subunit (predicted)","termid":"PBO:0005752"}


id: PBO:0063950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINX1 divergent transcript","termid":"PBO:0063950"}


id: PBO:0046849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 12","termid":"PBO:0046849"}


id: PBO:0078942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 9-1","termid":"PBO:0078942"}


id: PBO:0042864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP95 divergent transcript","termid":"PBO:0042864"}


id: PBO:0050316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 18","termid":"PBO:0050316"}


id: GO:0038083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own tyrosine amino acid residues, or a tyrosine residue on an identical protein.","definition_xrefs":["PMID:10068444","PMID:10940390","PMID:10037737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine autophosphorylation","synonyms":[{"name":"RTK autophosphorylation","type":"narrow"},{"name":"receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"tyrosine autophosphorylation","type":"exact"}],"termid":"GO:0038083"}


id: PBO:0070712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 17","termid":"PBO:0070712"}


id: GO:0051538
data:
  {"annotated_genes":["SJAG_00260","SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84985,97663],"is_not":false,"summary":null,"term":"GO:0051538"}]},"cv_name":"molecular_function","definition":"Binding to a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing.","definition_xrefs":["Wikipedia:Iron-sulfur_cluster","PMID:15952888","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"3 iron, 4 sulfur cluster binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3 Fe 4 S cluster binding","type":"exact"},{"name":"3 iron, 4 sulphur cluster binding","type":"exact"},{"name":"3Fe-4S cluster binding","type":"exact"},{"name":"iron-sulfur cluster 3Fe-4S binding","type":"exact"},{"name":"iron-sulphur cluster 3Fe-4S binding","type":"exact"},{"name":"triiron tetrasulfide cluster binding","type":"exact"},{"name":"triiron tetrasulphide cluster binding","type":"exact"}],"termid":"GO:0051538","terms_by_termid":{"GO:0051538":null}}


id: PBO:0086657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; has some characteristics of a transcriptional activator; may be a target of Dbf2p-Mob1p kinase; GFP-fusion protein co-localizes with clathrin-coated vesicles; YML037C is not an essential gene","termid":"PBO:0086657"}


id: PBO:0066161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2-type and C3HC4-type zinc finger containing 1","termid":"PBO:0066161"}


id: PBO:0061961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 25","termid":"PBO:0061961"}


id: PBO:0082123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acidic protein of the mitochondrial matrix; binds unassembled large subunit proteins during ribosome assembly; subunit of a complex containing Mrx6p, Pim1p, and Pet20p that may regulate mtDNA replication; related to the human complement receptor gC1q-R","termid":"PBO:0082123"}


id: PBO:0081522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 431","termid":"PBO:0081522"}


id: PBO:0088754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase","termid":"PBO:0088754"}


id: PBO:0087155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase in the DEAD-box family; necessary for prespliceosome formation, bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA","termid":"PBO:0087155"}


id: PBO:0038578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abraxas 2, BRISC complex subunit","termid":"PBO:0038578"}


id: PBO:0016994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR3","termid":"PBO:0016994"}


id: GO:0018144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between RNA and a protein.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid-protein covalent cross-linking","termid":"GO:0018143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA-protein covalent cross-linking","termid":"GO:0018144"}


id: PBO:0091465
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamine substrate KM 800 uM, 2-oxoglutarate substrate KM 9 uM, NADH substrate KM 11 uM, pH optimum 6.4","termid":"PBO:0091465"}


id: PBO:0063315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain containing 2","termid":"PBO:0063315"}


id: PBO:0063778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 5","termid":"PBO:0063778"}


id: PBO:0061733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoredoxin","termid":"PBO:0061733"}


id: PBO:0050202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 19","termid":"PBO:0050202"}


id: PBO:0044342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 26","termid":"PBO:0044342"}


id: PBO:0000249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase Shk2","termid":"PBO:0000249"}


id: GO:0015969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"guanosine tetraphosphate metabolic process","secondary_identifiers":["MetaCyc:PPGPPMET-PWY"],"synonyms":[{"name":"guanosine tetraphosphate (5'-ppGpp-3') metabolic process","type":"exact"},{"name":"guanosine tetraphosphate (5'-ppGpp-3') metabolism","type":"exact"},{"name":"guanosine tetraphosphate metabolism","type":"exact"}],"termid":"GO:0015969"}


id: PBO:0013438
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe FLocculin","termid":"PBO:0013438"}


id: GO:0016032
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64917],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0075523"}]},"cv_name":"biological_process","definition":"A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.","definition_xrefs":["GOC:bf","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral process","references_by_uniquename":{"GO_REF:0000043":null},"secondary_identifiers":["GO:0022415","Wikipedia:Viral_life_cycle"],"synonyms":[{"name":"viral infection","type":"related"},{"name":"virulence","type":"related"},{"name":"virus process","type":"exact"}],"termid":"GO:0016032","terms_by_termid":{"GO:0075523":null}}


id: PBO:0071071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 73","termid":"PBO:0071071"}


id: GO:1900843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of monodictyphenone biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"monodictyphenone biosynthetic process","termid":"GO:1900815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of monodictyphenone biosynthetic process","synonyms":[{"name":"regulation of monodictyphenone anabolism","type":"exact"},{"name":"regulation of monodictyphenone biosynthesis","type":"exact"},{"name":"regulation of monodictyphenone formation","type":"exact"},{"name":"regulation of monodictyphenone synthesis","type":"exact"}],"termid":"GO:1900843"}


id: PR:O14126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 6A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23073:SF7","OMA:SCHPO01437","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 6A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.12c","secondary_identifiers":["UniProtKB:O14126"],"synonyms":[{"name":"Spom972h-PSMC3","type":"exact"}],"termid":"PR:O14126"}


id: GO:0021550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the medulla oblongata over time, from its formation to the mature structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:dph","ISBN:0838580343","GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata development","synonyms":[{"name":"medulla development","type":"related"},{"name":"myelencephalon development","type":"related"}],"termid":"GO:0021550"}


id: PBO:0050429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPK antisense RNA 1","termid":"PBO:0050429"}


id: PBO:0080121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAC14 antisense RNA 1","termid":"PBO:0080121"}


id: PR:Q9Y709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- skp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of kinetochore protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.05","synonyms":[{"name":"P19/Skp1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-skp1","type":"exact"}],"termid":"PR:Q9Y709"}


id: SO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An absolute reference to the strand. When a chromosome has p and q arms, the Watson strand is the strand whose 5'-end is on the short arm of the chromosome. Of note, the term 'plus strand' is typically based on a reference sequence where it's preferred for the plus strand to be the Watson strand, but might not be and 'plus strand' is therefore not an exact synonym.","definition_xrefs":["PMID:21303550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Watson_strand","synonyms":[{"name":"Forward strand","type":"exact"},{"name":"Plus strand","type":"broad"},{"name":"Top strand","type":"exact"},{"name":"Watson strand","type":"exact"}],"termid":"SO:0002262"}


id: GO:0097122
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin A2 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin A2-CDK1 complex","termid":"GO:0097122"}


id: PBO:0042133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calicin","termid":"PBO:0042133"}


id: FYPO:0000357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the mating projection is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal shmoo morphology","synonyms":[{"name":"abnormal conjugation tube morphology","type":"exact"},{"name":"abnormal mating projection morphology","type":"exact"},{"name":"mating projection morphology: abnormal","type":"related"}],"termid":"FYPO:0000357"}


id: PBO:0049013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6A","termid":"PBO:0049013"}


id: GO:0031567
data:
  {"annotated_genes":["SJAG_01401","SJAG_04332","SJAG_00071","SJAG_03048","SJAG_01210","SJAG_02392","SJAG_03602","SJAG_03681","SJAG_04280"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98499,97754,85109,105017,112030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[112136,90678,91990,94573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint during mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02392":null,"SJAG_03048":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052","GO:0044772"],"is_obsolete":false,"name":"mitotic cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072471"],"synonyms":[{"name":"mitotic cell cycle cell size control checkpoint","type":"related"},{"name":"mitotic cell size control checkpoint","type":"related"},{"name":"signal transduction involved in cell size control checkpoint","type":"related"}],"termid":"GO:0031567","terms_by_termid":{"GO:0031568":null,"GO:0031569":null}}


id: PBO:0086698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to the membrane fraction; possible Zap1p-regulated target gene induced by zinc deficiency; YJL132W is a non-essential gene","termid":"PBO:0086698"}


id: GO:0043614
data:
  {"annotated_genes":["SJAG_02628","SJAG_05003"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92723,101436],"is_not":false,"summary":null,"term":"GO:0043614"}]},"cv_name":"cellular_component","definition":"A multifactor complex composed of multiple translation initiation factors and the initiatior tRNAiMet, which is ready to bind to the small (40S) ribosome to form the 43S preinitiation complex. In S. cerevisiae, this complex is composed of eIF1, eIF2, eIF3, and eIF5.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02628":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"multi-eIF complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"multifactor translation initiation factor (eIF) complex","type":"exact"}],"termid":"GO:0043614","terms_by_termid":{"GO:0043614":null}}


id: FYPO:0005533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 at the IRC1L boundary element occurs to a lower extent than normal.","definition_xrefs":["PMID:25972440","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone acetylation during vegetative growth","termid":"FYPO:0000331"},{"relation_name":"is_a","term_name":"abnormal histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0005532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H4-K16 acetylation at boundary element IRC1L during vegetative growth","synonyms":[{"name":"decreased histone H4-K16 acetylation at boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"decreased histone H4K16 acetylation at centromeric boundary element IRC1L during vegetative growth","type":"exact"},{"name":"reduced histone H4-K16 acetylation at boundary element IRC1L during vegetative growth","type":"exact"}],"termid":"FYPO:0005533"}


id: PBO:0063149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAT1 homolog 2","termid":"PBO:0063149"}


id: GO:0018805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fumarate + toluene = 2-benzylsuccinate.","definition_xrefs":["RHEA:10416","EC:4.1.99.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"benzylsuccinate synthase activity","secondary_identifiers":["MetaCyc:RXN-863","KEGG_REACTION:R05598","UM-BBD_enzymeID:e0259"],"synonyms":[{"name":"benzylsuccinate fumarate-lyase (toluene-forming)","type":"related"},{"name":"benzylsuccinate fumarate-lyase activity","type":"related"}],"termid":"GO:0018805"}


id: GO:0021826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where neuronal precursors migrate tangentially in the telencephalon, primarily guided by interactions that do not require cell-cell contact.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-independent telencephalic tangential migration","termid":"GO:0021826"}


id: PBO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog2 (predicted)","termid":"PBO:0003362"}


id: PBO:0056166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic arrest deficient 2 like 1 pseudogene 1","termid":"PBO:0056166"}


id: PBO:0081421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 277","termid":"PBO:0081421"}


id: PBO:0048157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 3","termid":"PBO:0048157"}


id: PBO:0034104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_and_ends_during","termid":"PBO:0034104"}


id: PBO:0078507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLR4 interactor with leucine rich repeats","termid":"PBO:0078507"}


id: GO:0045820
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72047,75036],"is_not":false,"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glycolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycolytic process","termid":"GO:0006110"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide catabolic process","termid":"GO:0033122"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of ATP metabolic process","termid":"GO:1903579"},{"relation_name":"negatively_regulates","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0055086","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glycolytic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of glycolysis","type":"exact"},{"name":"down-regulation of glycolysis","type":"exact"},{"name":"downregulation of glycolysis","type":"exact"},{"name":"inhibition of glycolysis","type":"narrow"}],"termid":"GO:0045820","terms_by_termid":{"GO:0045820":null}}


id: FYPO:0001587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to cell tip during vegetative growth","synonyms":[{"name":"normal protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"normal protein localization to cell end during vegetative growth","type":"exact"},{"name":"normal protein localization to cell tip during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001587"}


id: PBO:0078175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-6","termid":"PBO:0078175"}


id: PBO:0068608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 59, pseudogene","termid":"PBO:0068608"}


id: PBO:0070655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 26","termid":"PBO:0070655"}


id: PBO:0069695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 974, pseudogene","termid":"PBO:0069695"}


id: GO:2001283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any Roundabout signaling pathway that is involved in the directed movement of a muscle cell towards a tendon cell in response to an external stimulus.","definition_xrefs":["GOC:obol","GOC:sart","PMID:19793885","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Roundabout signaling pathway","termid":"GO:0035385"},{"relation_name":"part_of","term_name":"muscle cell chemotaxis toward tendon cell","termid":"GO:0036061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Roundabout signaling pathway involved in muscle cell chemotaxis toward tendon cell","synonyms":[{"name":"ROBO signaling pathway involved in muscle cell attraction","type":"related"},{"name":"ROBO signaling pathway involved in muscle cell chemotaxis toward tendon cell","type":"exact"},{"name":"ROBO signaling pathway involved in muscle cell chemotaxis towards tendon cell","type":"exact"},{"name":"ROBO/SLIT signaling pathway involved in muscle cell attraction","type":"related"},{"name":"ROBO/SLIT signaling pathway involved in muscle cell chemotaxis toward tendon cell","type":"exact"},{"name":"ROBO/SLIT signaling pathway involved in muscle cell chemotaxis towards tendon cell","type":"exact"},{"name":"Roundabout signaling pathway involved in muscle cell attraction","type":"related"},{"name":"Roundabout signaling pathway involved in muscle cell chemotaxis towards tendon cell","type":"exact"},{"name":"Roundabout signalling pathway involved in muscle cell attraction","type":"related"},{"name":"Roundabout signalling pathway involved in muscle cell chemotaxis toward tendon cell","type":"exact"},{"name":"Roundabout signalling pathway involved in muscle cell chemotaxis towards tendon cell","type":"exact"}],"termid":"GO:2001283"}


id: PR:O42860
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic checkpoint protein BUB3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:KER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic checkpoint protein BUB3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.08c","secondary_identifiers":["UniProtKB:O42860","PR:000035571"],"synonyms":[{"name":"SPAC23H3.08c","type":"related"},{"name":"Spom972h-BUB3","type":"exact"}],"termid":"PR:O42860"}


id: PBO:0058273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-2","termid":"PBO:0058273"}


id: PBO:0002982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class-III, unknown specificity","termid":"PBO:0002982"}


id: PBO:0040108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase 2B","termid":"PBO:0040108"}


id: GO:0016102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diterpenoid compounds, terpenoids with four isoprene units.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"diterpenoid biosynthetic process","synonyms":[{"name":"diterpene biosynthesis","type":"narrow"},{"name":"diterpene biosynthetic process","type":"narrow"},{"name":"diterpenoid anabolism","type":"exact"},{"name":"diterpenoid biosynthesis","type":"exact"},{"name":"diterpenoid formation","type":"exact"},{"name":"diterpenoid synthesis","type":"exact"}],"termid":"GO:0016102"}


id: PBO:0057533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 649","termid":"PBO:0057533"}


id: PBO:0064334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 4","termid":"PBO:0064334"}


id: PR:G2TRS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP35G2.17 gene.","definition_xrefs":["UniProtKB:G2TRS6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P35G2.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.17","synonyms":[{"name":"Spom972h-SPBP35G2.17","type":"exact"}],"termid":"PR:G2TRS6"}


id: PBO:0058641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6770-3","termid":"PBO:0058641"}


id: PR:O74526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light chain kinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase C70.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.05c","secondary_identifiers":["UniProtKB:O74526"],"synonyms":[{"name":"Spom972h-MYLK3","type":"exact"}],"termid":"PR:O74526"}


id: PBO:0052983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte activating 3","termid":"PBO:0052983"}


id: PBO:0058259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4637","termid":"PBO:0058259"}


id: PBO:0078009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF-type zinc finger domain containing 1","termid":"PBO:0078009"}


id: PBO:0072585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 7 homolog B, pseudogene","termid":"PBO:0072585"}


id: PBO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.9","termid":"PBO:0001509"}


id: FYPO:0004205
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115433],"is_not":false,"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature siRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased siRNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"decreased mature siRNA level","type":"exact"},{"name":"decreased siRNA accumulation","type":"related"},{"name":"decreased siRNA level during mitotic cell cycle","type":"related"},{"name":"decreased siRNA level during vegetative growth","type":"exact"},{"name":"decreased siRNA transcript level","type":"exact"},{"name":"decreased small interfering RNA level","type":"exact"},{"name":"reduced siRNA level","type":"exact"}],"termid":"FYPO:0004205","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: GO:0009293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of horizontal gene transfer in which genetic material is introduced into a cell mediated by a virus.","definition_xrefs":["PMID:33597173","PMID:18265289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gene transfer","termid":"GO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transduction","secondary_identifiers":["Wikipedia:Transduction_(genetics)"],"termid":"GO:0009293"}


id: GO:0021899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh","PMID:16226447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in forebrain neuron fate commitment","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0021899"}


id: GO:0070582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA-dependent DNA replication process in which a double-stranded DNA molecule is synthesized from a circular duplex template.","definition_xrefs":["GOC:mah","ISBN:0198506732","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"theta DNA replication","synonyms":[{"name":"theta replication","type":"exact"}],"termid":"GO:0070582"}


id: PBO:0059436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A6A","termid":"PBO:0059436"}


id: GO:0032782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of bile acid, composed of any of a group of steroid carboxylic acids occurring in bile, by a cell or a tissue.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"bile acid secretion","termid":"GO:0032782"}


id: PBO:0075623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBF pathway regulator in golgi 1","termid":"PBO:0075623"}


id: PBO:0043683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fate and sterol metabolism associated divergent transcript of MOCOS","termid":"PBO:0043683"}


id: PBO:0065110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C epsilon","termid":"PBO:0065110"}


id: PBO:0079877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3B regulator of nonsense mediated mRNA decay","termid":"PBO:0079877"}


id: PBO:0060462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium leak channel, non-selective","termid":"PBO:0060462"}


id: FYPO:0001158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular pH","synonyms":[{"name":"normal cellular pH during mitotic cell cycle","type":"related"},{"name":"normal cellular pH during vegetative growth","type":"exact"},{"name":"normal cellular pH level","type":"exact"}],"termid":"FYPO:0001158"}


id: GO:0021587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellum is generated and organized. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.","definition_xrefs":["GOC:dph","GOC:dgh","GO_REF:0000021","ISBN:0838580343","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum morphogenesis","termid":"GO:0021587"}


id: PBO:0025464
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this protein is shorter than the S. cerevisiae ortholog and missing the enoyl-CoA hydratase domain. Other genes for fatty acid beta-oxidation are also absent","termid":"PBO:0025464"}


id: PBO:0009107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I core factor complex subunit Rrn7","termid":"PBO:0009107"}


id: PBO:0066279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member C, pseudogene","termid":"PBO:0066279"}


id: GO:0016857
data:
  {"annotated_genes":["SJAG_00501","SJAG_02951","SJAG_03818","SJAG_01784"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109858,109859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004034"},{"annotations":[92505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004750"},{"annotations":[105728,109862,109863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003978"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00501":null,"SJAG_01784":null,"SJAG_02951":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"racemase and epimerase activity, acting on carbohydrates and derivatives","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.1.3.-","Reactome:R-HSA-6787677"],"termid":"GO:0016857","terms_by_termid":{"GO:0003978":null,"GO:0004034":null,"GO:0004750":null}}


id: MOD:00361
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an S-adenosylmethionine and a four-iron four-sulfur cluster to tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide.","definition_xrefs":["PubMed:14704425","PubMed:11222759","RESID:AA0356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S-S-AdoMet)","type":"exact"},{"name":"tetra-mu3-sulfido(S-adenosylmethion-N,O-diyliron)tris(S-cysteinyliron)","type":"exact"},{"name":"tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00361"}


id: PBO:0061144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 family member 7","termid":"PBO:0061144"}


id: PBO:0055091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2509","termid":"PBO:0055091"}


id: PBO:0062003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 2","termid":"PBO:0062003"}


id: PBO:0061723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2H, pseudogene","termid":"PBO:0061723"}


id: GO:1902988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a neurofibrillary tangle.","definition_xrefs":["GO_REF:0000079","PMID:22986780","PMID:24154541","GOC:TermGenie","GOC:sjp","PMID:15897157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"neurofibrillary tangle assembly","synonyms":[{"name":"flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"neurofibrillary tangle formation","type":"exact"},{"name":"star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902988"}


id: GO:0035872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a nucleotide-binding domain, leucine rich repeat containing receptor (NLR), and ending with the regulation of a downstream cellular process. NLRs are cytoplasmic receptors defined by their tripartite domain architecture that contains: a variable C-terminus, a middle nucleotide-binding domain, and a LRR domain that is variable in the repeats composition and number.","definition_xrefs":["PMID:32838963","PMID:36973360","PMID:18280719","GOC:sj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","synonyms":[{"name":"NLR signaling pathway","type":"exact"},{"name":"NOD-like receptor signaling pathway","type":"related"},{"name":"nucleotide-binding domain leucine-rich repeat containing receptor signaling pathway","type":"exact"},{"name":"nucleotide-binding domain, leucine rich repeat containing receptor signal transduction","type":"exact"},{"name":"nucleotide-binding domain, leucine rich repeat containing receptor signal transduction pathway","type":"exact"},{"name":"nucleotide-binding domain, leucine rich repeat containing receptor signalling pathway","type":"exact"}],"termid":"GO:0035872"}


id: PBO:0073592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shortage in chiasmata 1","termid":"PBO:0073592"}


id: GO:0043718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(hydroxymethyl)glutarate + NAD+ = 2-formylglutarate + H+ + NADH.","definition_xrefs":["EC:1.1.1.291","RHEA:15505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxymethylglutarate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.291-RXN","KEGG_REACTION:R07985","Wikipedia:2-hydroxymethylglutarate_dehydrogenase"],"synonyms":[{"name":"(S)-2-hydroxymethylglutarate:NAD+ oxidoreductase activity","type":"related"},{"name":"HgD","type":"exact"}],"termid":"GO:0043718"}


id: GO:0030501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone mineralization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone mineralization","termid":"GO:0030500"},{"relation_name":"is_a","term_name":"positive regulation of ossification","termid":"GO:0045778"},{"relation_name":"is_a","term_name":"positive regulation of biomineral tissue development","termid":"GO:0070169"},{"relation_name":"positively_regulates","term_name":"bone mineralization","termid":"GO:0030282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone mineralization","synonyms":[{"name":"activation of bone mineralization","type":"narrow"},{"name":"stimulation of bone mineralization","type":"narrow"},{"name":"up regulation of bone mineralization","type":"exact"},{"name":"up-regulation of bone mineralization","type":"exact"},{"name":"upregulation of bone mineralization","type":"exact"}],"termid":"GO:0030501"}


id: GO:0070859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of bile acid biosynthetic process","termid":"GO:0070857"},{"relation_name":"is_a","term_name":"positive regulation of bile acid metabolic process","termid":"GO:1904253"},{"relation_name":"positively_regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of bile acid biosynthetic process","synonyms":[{"name":"activation of bile acid biosynthetic process","type":"narrow"},{"name":"positive regulation of bile acid anabolism","type":"exact"},{"name":"positive regulation of bile acid biosynthesis","type":"exact"},{"name":"positive regulation of bile acid formation","type":"exact"},{"name":"positive regulation of bile acid synthesis","type":"exact"},{"name":"stimulation of bile acid biosynthetic process","type":"narrow"},{"name":"up regulation of bile acid biosynthetic process","type":"exact"},{"name":"up-regulation of bile acid biosynthetic process","type":"exact"},{"name":"upregulation of bile acid biosynthetic process","type":"exact"}],"termid":"GO:0070859"}


