# terms

id: GO:0032890
data:
  {"annotated_genes":["SJAG_03591","SJAG_02605","SJAG_04920","SJAG_05346","SJAG_00991","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[86082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[87874,89455,95012,106671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[89456,87875,95013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[89457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"organic acid transport","termid":"GO:0015849"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of organic acid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032890","terms_by_termid":{"GO:0035432":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:0035766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell in response to the presence of fibroblast growth factor (FGF).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"part_of","term_name":"cellular response to fibroblast growth factor stimulus","termid":"GO:0044344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"}


id: PBO:0069540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 810, pseudogene","termid":"PBO:0069540"}


id: PBO:0038614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACD shelterin complex subunit and telomerase recruitment factor","termid":"PBO:0038614"}


id: GO:0015932
data:
  {"annotated_genes":["SJAG_03503","SJAG_00339","SJAG_00612","SJAG_02050","SJAG_00154","SJAG_04328","SJAG_04162","SJAG_01960","SJAG_03334","SJAG_00760","SJAG_01177","SJAG_00434","SJAG_03452","SJAG_04325","SJAG_04697"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[97490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[102826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[107027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[86974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[103692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015230"},{"annotations":[89466,59041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[85143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[111278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001409"},{"annotations":[89029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"},{"annotations":[95433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015218"},{"annotations":[84541,108507,111689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[108508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[101098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[101099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of nucleobases, nucleosides, nucleotides and nucleic acids from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04328":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"nucleobase-containing compound transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity","type":"related"}],"termid":"GO:0015932","terms_by_termid":{"GO:0001409":null,"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0008521":null,"GO:0015218":null,"GO:0015228":null,"GO:0015230":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: GO:0015256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete monocarboxylate channel activity (obsolete GO:0015256)","synonyms":[{"name":"monocarboxylate channel activity","type":"exact"}],"termid":"GO:0015256"}


id: PBO:0057933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3659 host gene","termid":"PBO:0057933"}


id: GO:0060173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. Examples include legs, arms or some types of fin.","definition_xrefs":["GOC:dgh","PMID:11487378","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb development","secondary_identifiers":["Wikipedia:Limb_development"],"synonyms":[{"name":"limb bud development","type":"narrow"},{"name":"paired limb/fin development","type":"exact"}],"termid":"GO:0060173"}


id: GO:1904346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastric mucosal blood circulation.","definition_xrefs":["GOC:TermGenie","PMID:10807413","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood circulation","termid":"GO:1903524"},{"relation_name":"is_a","term_name":"regulation of gastric mucosal blood circulation","termid":"GO:1904344"},{"relation_name":"positively_regulates","term_name":"gastric mucosal blood circulation","termid":"GO:1990768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastric mucosal blood circulation","synonyms":[{"name":"activation of gastric mucosal blood circulation","type":"narrow"},{"name":"activation of stomach mucosal blood circulation","type":"narrow"},{"name":"positive regulation of stomach mucosal blood circulation","type":"exact"},{"name":"up regulation of gastric mucosal blood circulation","type":"exact"},{"name":"up regulation of stomach mucosal blood circulation","type":"exact"},{"name":"up-regulation of gastric mucosal blood circulation","type":"exact"},{"name":"up-regulation of stomach mucosal blood circulation","type":"exact"},{"name":"upregulation of gastric mucosal blood circulation","type":"exact"},{"name":"upregulation of stomach mucosal blood circulation","type":"exact"}],"termid":"GO:1904346"}


id: PBO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6","termid":"PBO:0000187"}


id: PBO:0002344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of rudimentary homolog","termid":"PBO:0002344"}


id: PBO:0066050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap1 GTPase-GDP dissociation stimulator 1","termid":"PBO:0066050"}


id: PBO:0070118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 32 pseudogene","termid":"PBO:0070118"}


id: GO:0016742
data:
  {"annotated_genes":["SJAG_02901","SJAG_03914","SJAG_01368","SJAG_05200","SJAG_01766","SJAG_04681","SJAG_01814","SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003864"},{"annotations":[92547,109165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004047"},{"annotations":[87439,90626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004372"},{"annotations":[87138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004479"},{"annotations":[115081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004643"},{"annotations":[113475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004644"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxymethyl- or formyl group from one compound (donor) to another (acceptor).","definition_xrefs":["EC:2.1.2.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring one-carbon groups","termid":"GO:0016741"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01368":null,"SJAG_01766":null,"SJAG_01814":null,"SJAG_02901":null,"SJAG_03641":null,"SJAG_03914":null,"SJAG_04681":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"hydroxymethyl-, formyl- and related transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016742","terms_by_termid":{"GO:0003864":null,"GO:0004047":null,"GO:0004372":null,"GO:0004479":null,"GO:0004643":null,"GO:0004644":null}}


id: PBO:0109142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic, EGF-CFC family member 1B","termid":"PBO:0109142"}


id: FYPO:0007980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain interphase microtubule bundles with microtubule overlaps longer than normal.","definition_xrefs":["PomBase:mlr","PMID:15837798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"Increased microtubule overlap length in bundles during mitotic interphase:","termid":"FYPO:0007980"}


id: PBO:0040114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 1","termid":"PBO:0040114"}


id: PBO:0040193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 6","termid":"PBO:0040193"}


id: PBO:0048125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 6","termid":"PBO:0048125"}


id: PBO:0048725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyltransferase 8 domain containing 1","termid":"PBO:0048725"}


id: PBO:0111869
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A","termid":"PBO:0111869"}


id: FYPO:0003779
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115290,115378,115383,115385],"is_not":false,"summary":null,"term":"FYPO:0003779"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03449":null},"genotype_count":4,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002403","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear envelope morphology during mitosis","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_01745","SJAG_03449"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","lem2delta","man1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal nuclear envelope morphology during mitotic M phase","type":"related"},{"name":"abnormal nuclear envelope morphology during mitotic nuclear division","type":"exact"},{"name":"abnormal nuclear membrane morphology during mitosis","type":"narrow"}],"termid":"FYPO:0003779","terms_by_termid":{"FYECO:0000162":null,"FYPO:0003779":null,"FYPO_EXT:0000001":null}}


id: PBO:0049825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparin binding growth factor","termid":"PBO:0049825"}


id: FYPO:0002270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutamate-ammonia ligase activity","termid":"FYPO:0002267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"increased glutamate-ammonia ligase activity","synonyms":[{"name":"increased GS activity","type":"exact"},{"name":"increased glutamine synthetase activity","type":"exact"},{"name":"increased glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"FYPO:0002270"}


id: PBO:0064708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 44","termid":"PBO:0064708"}


id: GO:0070519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to membrane protein CD63, a member of the tetraspan family.","definition_xrefs":["PMID:8757325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD63 complex","synonyms":[{"name":"ITGA4-ITGB1-CD63 complex","type":"narrow"}],"termid":"GO:0070519"}


id: GO:0048849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to neurohypophysis. This process pertains to the initial formation of a structure from unspecified parts. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neurohypophysis morphogenesis","termid":"GO:0048848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurohypophysis formation","synonyms":[{"name":"neurophysis biosynthesis","type":"exact"},{"name":"neurophysis formation","type":"exact"},{"name":"posterior pituitary biosynthesis","type":"exact"},{"name":"posterior pituitary formation","type":"exact"},{"name":"posterior pituitary gland biosynthesis","type":"exact"},{"name":"posterior pituitary gland formation","type":"exact"}],"termid":"GO:0048849"}


id: GO:0044205
data:
  {"annotated_genes":["SJAG_00444","SJAG_00694","SJAG_03164","SJAG_00964","SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85605,89546,94638,108045,112854],"is_not":false,"summary":null,"term":"GO:0044205"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD+ or oxygen.","definition_xrefs":["GOC:jl","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP biosynthetic process","termid":"GO:0006222"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"'de novo' UMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"'de novo' UMP biosynthesis","type":"exact"}],"termid":"GO:0044205","terms_by_termid":{"GO:0044205":null}}


id: PR:Q10109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lem2 gene.","definition_xrefs":["UniProtKB:Q10109","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lap-Emerin-Man domain protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.10","synonyms":[{"name":"LEM domain protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lem2","type":"exact"}],"termid":"PR:Q10109"}


id: GO:0052878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + linoleate = (8R,9Z,12Z)-8-hydroperoxyoctadeca-9,12-dienoate.","definition_xrefs":["RHEA:25395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"linoleate 8R-lipoxygenase activity","secondary_identifiers":["EC:1.13.11.60","MetaCyc:RXN-12756","KEGG_REACTION:R07061"],"synonyms":[{"name":"5,8-LDS (bifunctional enzyme) activity","type":"related"},{"name":"5,8-linoleate diol synthase (bifunctional enzyme) activity","type":"related"},{"name":"7,8-LDS (bifunctional enzyme) activity","type":"related"},{"name":"7,8-linoleate diol synthase (bifunctional enzyme) activity","type":"related"},{"name":"linoleate diol synthase activity","type":"related"}],"termid":"GO:0052878"}


id: PBO:0076083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin 3","termid":"PBO:0076083"}


id: GO:0102436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-O-methylmyricetin + S-adenosyl-L-methionine = 7,4'-dimethylmyricetin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"7-methylmyricetin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13911"],"termid":"GO:0102436"}


id: PBO:0035717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcriptional_repression_at_centromere_central_core","termid":"PBO:0035717"}


id: PBO:0054941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2355","termid":"PBO:0054941"}


id: PBO:0054853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2267","termid":"PBO:0054853"}


id: PBO:0030055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_adenylyl_cyclase_activity","termid":"PBO:0030055"}


id: GO:0010425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group, to C-5 or N-4, of a cytosine located within a CNG sequence in a DNA molecule. N stands for any nucleotide.","definition_xrefs":["PMID:17239600","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation on cytosine within a CNG sequence (obsolete GO:0010425)","synonyms":[{"name":"cytosine methylation within a CNG sequence","type":"exact"}],"termid":"GO:0010425"}


id: GO:1902822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of late endosome to lysosome transport.","definition_xrefs":["GOC:pad","GOC:PARL","GO_REF:0000058","GOC:TermGenie","PMID:23949442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"regulates","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of late endosome to lysosome transport","synonyms":[{"name":"regulation of prevacuolar compartment to lysosome transport","type":"broad"}],"termid":"GO:1902822"}


id: PBO:0053789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1040","termid":"PBO:0053789"}


id: FYPO:0007427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of the old spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the nucleus. The old SPB may be transiently inserted into the nuclear envelope but does not remain in place as normal.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:19487457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","termid":"FYPO:0003568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal old mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","synonyms":[{"name":"abnormal establishment of old mitotic spindle pole body localization to nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal old mitotic SPB insertion into nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal old mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal old mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0007427"}


id: PBO:0072468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 32","termid":"PBO:0072468"}


id: GO:1903292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a Golgi membrane.","definition_xrefs":["PMID:11378902","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to Golgi membrane","synonyms":[{"name":"protein localisation in Golgi membrane","type":"exact"},{"name":"protein localisation to Golgi membrane","type":"exact"},{"name":"protein localization in Golgi membrane","type":"exact"}],"termid":"GO:1903292"}


id: PBO:0051426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-4 (pseudogene)","termid":"PBO:0051426"}


id: PBO:0077684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 13b","termid":"PBO:0077684"}


id: GO:0032634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-5 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-5 production","secondary_identifiers":["GO:0072603","GO:0042225"],"synonyms":[{"name":"IL-5 production","type":"exact"},{"name":"interleukin-5 biosynthetic process","type":"narrow"},{"name":"interleukin-5 secretion","type":"narrow"}],"termid":"GO:0032634"}


id: GO:0035837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an ergot alkaloid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid biosynthetic process","termid":"GO:0009709"},{"relation_name":"is_a","term_name":"ergot alkaloid metabolic process","termid":"GO:0035836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ergot alkaloid biosynthetic process","synonyms":[{"name":"ergot alkaloid anabolism","type":"exact"},{"name":"ergot alkaloid biosynthesis","type":"exact"},{"name":"ergot alkaloid formation","type":"exact"},{"name":"ergot alkaloid synthesis","type":"exact"}],"termid":"GO:0035837"}


id: PBO:0075417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 4","termid":"PBO:0075417"}


id: PBO:0069562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 834, pseudogene","termid":"PBO:0069562"}


id: SO:0000955
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"double","termid":"SO:0000985"},{"relation_name":"is_a","term_name":"DNA_chromosome","termid":"SO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double_stranded_DNA_chromosome","synonyms":[{"name":"double stranded DNA chromosome","type":"exact"}],"termid":"SO:0000955"}


id: GO:0031216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of pullulan to panose (6-alpha-D-glucosylmaltose).","definition_xrefs":["GOC:mlg","EC:3.2.1.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"neopullulanase activity","secondary_identifiers":["MetaCyc:3.2.1.135-RXN"],"synonyms":[{"name":"pullulan 4-D-glucanohydrolase (panose-forming)","type":"related"},{"name":"pullulanase II activity","type":"exact"}],"termid":"GO:0031216"}


id: PBO:0048022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor substrate 3","termid":"PBO:0048022"}


id: PBO:0082162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenylate cyclase; required for cAMP production and cAMP-dependent protein kinase signaling; scaffold protein for Ras2-Ira interaction; the cAMP pathway controls a variety of cellular processes, including metabolism, cell cycle, stress response, stationary phase, and sporulation","termid":"PBO:0082162"}


id: GO:0006379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cleavage (obsolete GO:0006379)","synonyms":[{"name":"cleavage stimulation factor activity","type":"related"}],"termid":"GO:0006379"}


id: PBO:0040852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S5-TXNDC5 readthrough (NMD candidate)","termid":"PBO:0040852"}


id: FYPO:0003249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured at centromeric dh repeat regions is lower than normal.","definition_xrefs":["PMID:22291963","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of histone H3 in cell","termid":"FYPO:0004578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of histone H3 at dh repeat","synonyms":[{"name":"decreased level of histone H3 at dh repeat during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H3 at dh repeat during vegetative growth","type":"exact"},{"name":"reduced level of histone H3 at dh repeat","type":"exact"}],"termid":"FYPO:0003249"}


id: GO:0070748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-35 receptor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-35 receptor binding","synonyms":[{"name":"IL-35","type":"narrow"},{"name":"interleukin-35 receptor ligand","type":"narrow"}],"termid":"GO:0070748"}


id: PBO:0072621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 6 homolog A","termid":"PBO:0072621"}


id: PBO:0059623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 4","termid":"PBO:0059623"}


id: GO:0052580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-menthone + NADP+ = (+)-pulegone + NADPH + H+.","definition_xrefs":["MetaCyc:RXN-5163","EC:1.3.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(+)-pulegone reductase, (-)-menthone as substrate, activity","secondary_identifiers":["MetaCyc:RXN-5164"],"synonyms":[{"name":"(-)-menthone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052580"}


id: PBO:0043497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTN4 antisense RNA 2","termid":"PBO:0043497"}


id: PBO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex subunit Swc4","termid":"PBO:0001277"}


id: PBO:0110425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2D3 pseudogene 5","termid":"PBO:0110425"}


id: GO:0046783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that interferes with and inhibits the assembly and function of polysomes.","definition_xrefs":["PMID:10438802"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by virus of host polysomes (obsolete GO:0046783)","synonyms":[{"name":"viral perturbation of polysomes","type":"exact"}],"termid":"GO:0046783"}


id: FYPO:0005078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of canavanine and rapamycin. Cells stop growing (and may die) at concentrations of canavanine and rapamycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:17179073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to canavanine and rapamycin","synonyms":[{"name":"hypersensitive to canavanine and rapamycin","type":"exact"},{"name":"sensitive to canavanine and rapamycin during mitotic cell cycle","type":"related"},{"name":"sensitive to canavanine and rapamycin during vegetative growth","type":"exact"},{"name":"sensitive to canavanine and rapamycin in combination","type":"exact"}],"termid":"FYPO:0005078"}


id: GO:0015833
data:
  {"annotated_genes":["SJAG_01983","SJAG_00922","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91669,99146,104110],"is_not":false,"summary":null,"term":"GO:0015833"}]},"cv_name":"biological_process","definition":"The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01660":null,"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"peptide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015833","terms_by_termid":{"GO:0015833":null}}


id: GO:1900177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aflatoxin biosynthetic process.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"aflatoxin biosynthetic process","termid":"GO:0045122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of aflatoxin biosynthetic process","synonyms":[{"name":"regulation of aflatoxin anabolism","type":"exact"},{"name":"regulation of aflatoxin biosynthesis","type":"exact"},{"name":"regulation of aflatoxin formation","type":"exact"},{"name":"regulation of aflatoxin synthesis","type":"exact"}],"termid":"GO:1900177"}


id: PR:Q9UTG6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionyl-tRNA formyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11138:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl-tRNA formyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.09c","secondary_identifiers":["UniProtKB:Q9UTG6"],"synonyms":[{"name":"SPAC1805.09c","type":"related"},{"name":"Spom972h-MTFMT","type":"exact"}],"termid":"PR:Q9UTG6"}


id: GO:0006226
data:
  {"annotated_genes":["SJAG_03771","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95121,104506],"is_not":false,"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dUMP, deoxyuridine monophosphate (2'-deoxyuridine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009177"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dUMP metabolic process","termid":"GO:0046078"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dUMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dUMP anabolism","type":"exact"},{"name":"dUMP biosynthesis","type":"exact"},{"name":"dUMP formation","type":"exact"},{"name":"dUMP synthesis","type":"exact"}],"termid":"GO:0006226","terms_by_termid":{"GO:0006226":null}}


id: GO:0035046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the male and female pronuclei towards each other prior to their fusion.","definition_xrefs":["PMID:9199363","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pronuclear migration","termid":"GO:0035046"}


id: PBO:0061025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 8","termid":"PBO:0061025"}


id: FYPO:0002018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain a detectable mitotic spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0000120","FYPO:0001320","FYPO:0005447","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"mitotic spindle absent from cell","synonyms":[{"name":"absent mitotic spindle","type":"exact"},{"name":"mitotic spindle absent from cell during vegetative growth","type":"exact"},{"name":"spindle absent from cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002018"}


id: GO:1901678
data:
  {"annotated_genes":["SJAG_02457","SJAG_02735","SJAG_02834","SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[61620,106912,61336,106913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"},{"annotations":[108928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015891"},{"annotations":[61335,106914,106915,61619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"The directed movement of an iron coordination entity into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02457":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"iron coordination entity transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1901678","terms_by_termid":{"GO:0015891":null,"GO:0033214":null,"GO:0044718":null,"GO:0140466":null}}


id: SO:0000376
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small (184-nt in E. coli) RNA that forms a hairpin type structure. 6S RNA associates with RNA polymerase in a highly specific manner. 6S RNA represses expression from a sigma70-dependent promoter during stationary phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_6S","secondary_identifiers":["http://en.wikipedia.org/wiki/6S_RNA"],"synonyms":[{"name":"6S RNA","type":"exact"},{"name":"RNA 6S","type":"exact"}],"termid":"SO:0000376"}


id: SO:0001094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with calcium ions.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_calcium_ion_contact_site","secondary_identifiers":["BS:00186"],"synonyms":[{"name":"Ca_contact_site","type":"exact"},{"name":"ca bind","type":"related"},{"name":"ca_bind","type":"exact"},{"name":"polypeptide calcium ion contact site","type":"exact"}],"termid":"SO:0001094"}


id: FYPO:0005817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or both ends end of a microtubule does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during mitotic interphase","termid":"FYPO:0005441"},{"relation_name":"is_a","term_name":"abolished protein localization to microtubule plus-end","termid":"FYPO:0005814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to microtubule plus-end during mitotic interphase","synonyms":[{"name":"abolished protein localisation to microtubule plus-end during mitotic interphase","type":"exact"},{"name":"abolished protein localization to microtubule plus end during mitotic interphase","type":"exact"},{"name":"abolished protein localization to microtubule plus-end during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to microtubule plus-end during interphase of mitotic cell cycle","type":"exact"},{"name":"protein localization to microtubule plus-end abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0005817"}


id: GO:0030936
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any collagen trimer that passes through a lipid bilayer membrane.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"transmembrane collagen trimer","synonyms":[{"name":"MACIT","type":"exact"}],"termid":"GO:0030936"}


id: PBO:0074670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 56","termid":"PBO:0074670"}


id: PBO:0077515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 231","termid":"PBO:0077515"}


id: GO:0031640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell killing","termid":"GO:0001906"},{"relation_name":"is_a","term_name":"disruption of cell in another organism","termid":"GO:0141061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"killing of cells of another organism","secondary_identifiers":["GO:0001908"],"synonyms":[{"name":"killing of cells of other organism","type":"exact"}],"termid":"GO:0031640"}


id: PBO:0051467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-42 (pseudogene)","termid":"PBO:0051467"}


id: PBO:0113256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pbp1p binding protein; interacts strongly with Pab1p-binding protein 1 (Pbp1p) in the yeast two-hybrid system; also interacts with Lsm12p in a copurification assay; relative distribution to the nucleus increases upon DNA replication stress; also detected in peroxisomes","termid":"PBO:0113256"}


id: PBO:0069489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 756, pseudogene","termid":"PBO:0069489"}


id: PBO:0085719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in targeting mitochondrial membrane protein precursors to mitochondrial translocation system; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO); YIL029C has a paralog, YPR071W, that arose from a single-locus duplication","termid":"PBO:0085719"}


id: PBO:0078867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 2","termid":"PBO:0078867"}


id: PBO:0067815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 117","termid":"PBO:0067815"}


id: FYPO:0007158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3 binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:31584934","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone binding","termid":"FYPO:0007157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased histone H3 binding","synonyms":[{"name":"decreased protein-histone H3 interaction","type":"exact"},{"name":"reduced histone H3 binding","type":"exact"}],"termid":"FYPO:0007158"}


id: FYPO:0001532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of S phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic S phase progression","termid":"FYPO:0003246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal duration of mitotic S phase","termid":"FYPO:0001532"}


id: PR:P87317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC31F10.16 gene.","definition_xrefs":["UniProtKB:P87317","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C31F10.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.16","synonyms":[{"name":"Spom972h-SPBC31F10.16","type":"exact"}],"termid":"PR:P87317"}


id: PBO:0065690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentraxin 4","termid":"PBO:0065690"}


id: PBO:0079851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog A","termid":"PBO:0079851"}


id: PBO:0027168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation","termid":"PBO:0027168"}


id: PBO:0077238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 3","termid":"PBO:0077238"}


id: PBO:0004904
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dominent ataxia SCA28","termid":"PBO:0004904"}


id: GO:1905073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tight junction disassembly.","definition_xrefs":["PMID:18718461","GO_REF:0000058","GOC:rl","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tight junction disassembly","synonyms":[{"name":"regulation of occluding cell junction disassembly","type":"exact"},{"name":"regulation of occluding junction disassembly","type":"exact"}],"termid":"GO:1905073"}


id: PBO:0052348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 3A pseudogene 1","termid":"PBO:0052348"}


id: GO:0061124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of a chlorinated alkylphenone. An alkylphenone is an aromatic polyketide with methyl and chlorine substitutions.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"},{"relation_name":"is_a","term_name":"positive regulation of positive chemotaxis to cAMP","termid":"GO:0061122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061124"}


id: PBO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.4","termid":"PBO:0002084"}


id: FYPO:0009042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sorbitol than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to sorbitol","synonyms":[{"name":"resistance to sorbitol during mitotic cell cycle","type":"related"},{"name":"resistance to sorbitol during vegetative growth","type":"exact"},{"name":"resistant to sorbitol","type":"exact"}],"termid":"FYPO:0009042"}


id: PBO:0075570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin 1","termid":"PBO:0075570"}


id: GO:0010072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the meristem which will give rise to all post-embryonic above-ground structures of the plant as well as the non-root below-ground structures, such as rhizomes and tubers.","definition_xrefs":["GOC:tair_curators","GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"embryonic meristem initiation","termid":"GO:0090421"},{"relation_name":"part_of","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"part_of","term_name":"embryonic meristem development","termid":"GO:0048508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary shoot apical meristem specification","synonyms":[{"name":"embryo shoot apical meristem specification","type":"exact"}],"termid":"GO:0010072"}


id: GO:0009579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.","definition_xrefs":["GOC:ds","GOC:mtg_sensu","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"thylakoid","secondary_identifiers":["Wikipedia:Thylakoid"],"synonyms":[{"name":"photosynthetic membrane","type":"related"}],"termid":"GO:0009579"}


id: GO:0047564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxycyclohexanone + A = AH(2) + cyclohexane-1,3-dione.","definition_xrefs":["RHEA:15905","EC:1.1.99.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-hydroxycyclohexanone dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03212","MetaCyc:3-HYDROXYCYCLOHEXANONE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"3-hydroxycyclohexanone:acceptor 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047564"}


id: PATO:0002243
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a fluid (liquid or gas) by virtue of the amount of fluid which passes through a given surface per unit time.","direct_ancestors":[{"relation_name":"is_a","term_name":"flow rate","termid":"PATO:0001574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluid flow rate","synonyms":[{"name":"volume flow rate","type":"exact"},{"name":"volumetric flow rate","type":"exact"}],"termid":"PATO:0002243"}


id: GO:0042011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-16.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-16 binding","synonyms":[{"name":"IL-16 binding","type":"exact"}],"termid":"GO:0042011"}


id: PBO:0089672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Rrp5","termid":"PBO:0089672"}


id: PBO:0046388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1A binding protein p300","termid":"PBO:0046388"}


id: GO:0045597
data:
  {"annotated_genes":["SJAG_00514","SJAG_03581","SJAG_04853","SJAG_02392","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91987,90716,86020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[98427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell differentiation","type":"narrow"},{"name":"stimulation of cell differentiation","type":"narrow"},{"name":"up regulation of cell differentiation","type":"exact"},{"name":"up-regulation of cell differentiation","type":"exact"},{"name":"upregulation of cell differentiation","type":"exact"}],"termid":"GO:0045597","terms_by_termid":{"GO:0051519":null,"GO:0075296":null,"GO:1903024":null}}


id: GO:0044446
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular organelle part (obsolete GO:0044446)","termid":"GO:0044446"}


id: PBO:0060324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IC","termid":"PBO:0060324"}


id: PBO:0040439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8B1","termid":"PBO:0040439"}


id: PBO:0028963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_meiotic_interphase_before_premeiotic_DNA_replication","termid":"PBO:0028963"}


id: GO:0048695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of collateral sprouting of an injured axon.","definition_xrefs":["GOC:lm","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of collateral sprouting","termid":"GO:0048671"},{"relation_name":"is_a","term_name":"negative regulation of sprouting of injured axon","termid":"GO:0048688"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting of injured axon","termid":"GO:0048693"},{"relation_name":"negatively_regulates","term_name":"collateral sprouting of injured axon","termid":"GO:0048674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collateral sprouting of injured axon","synonyms":[{"name":"down regulation of collateral sprouting of injured axon","type":"exact"},{"name":"down-regulation of collateral sprouting of injured axon","type":"exact"},{"name":"downregulation of collateral sprouting of injured axon","type":"exact"},{"name":"inhibition of collateral sprouting of injured axon","type":"narrow"}],"termid":"GO:0048695"}


id: GO:1902022
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029","SJAG_03400","SJAG_03256","SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[98939,99975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[93507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[99976,106154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of a L-lysine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:22822152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-lysine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902022","terms_by_termid":{"GO:0089707":null,"GO:0090517":null,"GO:0097639":null,"GO:1901482":null}}


id: GO:0003241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Developmental growth that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"heart growth","termid":"GO:0060419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth involved in heart morphogenesis","termid":"GO:0003241"}


id: GO:1905932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell differentiation involved in phenotypic switching.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:BHF_miRNA","PMID:25089138","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905065"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905917"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905930"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","synonyms":[{"name":"activation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"activation of VSMC differentiation involved in phenotypic switching","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"activation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"activation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"activation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"positive regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"positive regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"positive regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"positive regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"up regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up-regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up-regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up-regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"upregulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"upregulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"upregulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905932"}


id: PBO:0064053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 87","termid":"PBO:0064053"}


id: PBO:0005627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central kinetochore associated family protein (predicted)","termid":"PBO:0005627"}


id: PBO:0070988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 12","termid":"PBO:0070988"}


id: GO:1900206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pronephric nephron tubule development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"pronephric nephron tubule development","termid":"GO:0039020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pronephric nephron tubule development","termid":"GO:1900206"}


id: GO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 4 isopentenyl diphosphate = 4 diphosphate + all-trans-heptaprenyl diphosphate.","definition_xrefs":["PMID:9708911","RHEA:27794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"heptaprenyl diphosphate synthase activity","secondary_identifiers":["MetaCyc:TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN","EC:2.5.1.30","GO:0036422"],"synonyms":[{"name":"HepPP synthase activity","type":"related"},{"name":"all-trans-heptaprenyl-diphosphate synthase activity","type":"exact"},{"name":"heptaprenyl pyrophosphate synthase activity","type":"related"},{"name":"heptaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"trans-hexaprenyltranstransferase activity","type":"exact"}],"termid":"GO:0000010"}


id: GO:0071294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to zinc ion","termid":"GO:0010043"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to zinc ion","synonyms":[{"name":"cellular response to zinc","type":"exact"}],"termid":"GO:0071294"}


id: GO:1990815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein localization to cell division site involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25411334"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein localization to cell division site after cytokinesis (obsolete GO:1990815)","termid":"GO:1990815"}


id: PBO:0065000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM6 antisense RNA 1","termid":"PBO:0065000"}


id: GO:0044200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround the host nucleus and form the nuclear envelope; excludes the intermembrane space.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell nuclear envelope","termid":"GO:0044199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear membrane","termid":"GO:0044200"}


id: PBO:0051806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQSEC3 antisense RNA 2","termid":"PBO:0051806"}


id: PBO:0065858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB15, member RAS oncogene family","termid":"PBO:0065858"}


id: GO:1904253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"positively_regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of bile acid metabolic process","synonyms":[{"name":"activation of bile acid metabolic process","type":"narrow"},{"name":"activation of bile acid metabolism","type":"narrow"},{"name":"positive regulation of bile acid metabolism","type":"exact"},{"name":"up regulation of bile acid metabolic process","type":"exact"},{"name":"up regulation of bile acid metabolism","type":"exact"},{"name":"up-regulation of bile acid metabolic process","type":"exact"},{"name":"up-regulation of bile acid metabolism","type":"exact"},{"name":"upregulation of bile acid metabolic process","type":"exact"},{"name":"upregulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904253"}


id: GO:0102506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-feruloyl-beta-D-glucose = cyanin betaine + ferulate + H+.","definition_xrefs":["EC:2.4.1.299","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose dependent) activity","secondary_identifiers":["MetaCyc:RXN-14432"],"termid":"GO:0102506"}


id: GO:0019767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"IgE receptor activity","termid":"GO:0019767"}


id: PBO:0044819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109B","termid":"PBO:0044819"}


id: FYPO:0007579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in the medial membrane band is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0032178","PMID:15517003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal plasma membrane sterol distribution","termid":"FYPO:0004963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal medial membrane band sterol distribution","synonyms":[{"name":"normal medial membrane band sterol distribution during mitotic cell cycle","type":"related"},{"name":"normal medial membrane band sterol distribution during vegetative growth","type":"exact"},{"name":"normal medial membrane domain sterol distribution","type":"exact"}],"termid":"FYPO:0007579"}


id: PR:Q9P7A1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PITH domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02656","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITH domain-containing protein P35G2.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.02","secondary_identifiers":["UniProtKB:Q9P7A1"],"synonyms":[{"name":"Spom972h-PITHD1","type":"exact"}],"termid":"PR:Q9P7A1"}


id: PBO:0078774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-6","termid":"PBO:0078774"}


id: PBO:0017681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transmembrane transporter Amt3","termid":"PBO:0017681"}


id: PATO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's exhibiting repetition of placement of its parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatial pattern","secondary_identifiers":["PATO:0000132","PATO:0001565"],"synonyms":[{"name":"distribution","type":"exact"},{"name":"pattern","type":"related"}],"termid":"PATO:0000060"}


id: GO:0003023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an increase in diameter of an artery is detected and converted to a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"baroreceptor detection of arterial stretch","termid":"GO:0001981"},{"relation_name":"part_of","term_name":"baroreceptor response to increased systemic arterial blood pressure","termid":"GO:0001983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor detection of increased arterial stretch","termid":"GO:0003023"}


id: PBO:0047334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillarin like 1","termid":"PBO:0047334"}


id: GO:0008112
data:
  {"annotated_genes":["SJAG_01425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96746],"is_not":false,"summary":null,"term":"GO:0008112"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + nicotinamide = 1-methylnicotinamide + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:23884","EC:2.1.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nicotinamide N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:NICOTINAMIDE-N-METHYLTRANSFERASE-RXN","KEGG_REACTION:R01269","Reactome:R-HSA-5359451"],"synonyms":[{"name":"S-adenosyl-L-methionine:nicotinamide N-methyltransferase activity","type":"related"},{"name":"nicotinamide methyltransferase activity","type":"related"}],"termid":"GO:0008112","terms_by_termid":{"GO:0008112":null}}


id: PBO:0060133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 34","termid":"PBO:0060133"}


id: SO:0000108
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with a frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"frameshift","termid":"SO:0000865"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_frameshift","synonyms":[{"name":"frameshifted mRNA","type":"exact"},{"name":"mRNA with frameshift","type":"exact"}],"termid":"SO:0000108"}


id: GO:0051858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process, either constitutive or induced, by which an organism evades, minimizes, or suppresses the effects of its symbiont organism's defense(s). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete avoidance of symbiont defenses (obsolete GO:0051858)","termid":"GO:0051858"}


id: GO:0004535
data:
  {"annotated_genes":["SJAG_02540","SJAG_00966","SJAG_04519","SJAG_04407","SJAG_01836"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89539,103915,109054,111786,112742],"is_not":false,"summary":null,"term":"GO:0004535"}]},"cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of poly(A) to 5'-AMP.","definition_xrefs":["EC:3.1.13.4","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00966":null,"SJAG_01836":null,"SJAG_02540":null,"SJAG_04407":null,"SJAG_04519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0016788","GO:0016787","GO:0004527"],"is_obsolete":false,"name":"poly(A)-specific ribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9822335","MetaCyc:3.1.13.4-RXN","Reactome:R-HSA-430021","Reactome:R-HSA-9822311","Reactome:R-HSA-429955","Reactome:R-HSA-429992"],"synonyms":[{"name":"2',3'-exoribonuclease activity","type":"related"},{"name":"3'-exoribonuclease activity","type":"related"},{"name":"poly(A)-specific RNase activity","type":"exact"}],"termid":"GO:0004535","terms_by_termid":{"GO:0004535":null}}


id: PBO:0071376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30","termid":"PBO:0071376"}


id: GO:1901650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actomyosin contractile ring localization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actomyosin contractile ring localization (obsolete GO:1901650)","termid":"GO:1901650"}


id: PBO:0063375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCYT1B antisense RNA 1","termid":"PBO:0063375"}


id: PBO:0076682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 1","termid":"PBO:0076682"}


id: PATO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's decomposition into component parts.","definition_xrefs":["Medical-dictionary:Medical-dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decayed","termid":"PATO:0001432"}


id: GO:0030463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell aging (sensu Fungi) (obsolete GO:0030463)","synonyms":[{"name":"cell aging (sensu Fungi)","type":"exact"}],"termid":"GO:0030463"}


id: GO:1901270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipooligosaccharide.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide catabolic process","synonyms":[{"name":"lipooligosaccharide breakdown","type":"exact"},{"name":"lipooligosaccharide catabolism","type":"exact"},{"name":"lipooligosaccharide degradation","type":"exact"}],"termid":"GO:1901270"}


id: PR:000028992
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An sre1-type sterol regulatory element-binding protein 1 cleaved 1 in Schizosaccharomyces pombe. This form is the N-terminal domain of the membrane protein sre1 that is cleaved off upon activation (e.g. by hypoxia). UniProtKB:Q9UUD1-1, 1-440.","definition_xrefs":["PomBase:AL","PMID:22017871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sre1/Clv:(1-440)","pombase_gene_id":"SPBC19C2.09","synonyms":[{"name":"PomBase_original_PRO_term_name: Sre1N (Schizosaccharomyces pombe)","type":"exact"},{"name":"sre1/Clv:(1-440)","type":"exact"}],"termid":"PR:000028992"}


id: PBO:0046768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 8","termid":"PBO:0046768"}


id: PBO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-like transcription factor and archael histone family protein","termid":"PBO:0001505"}


id: GO:1990682
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a macrophage colony-stimulating factor (CSF1, also called M-CSF) dimer bound to a dimerized receptor (CSF1R, also called FMS). Receptor dimerization requires the presence of the ligand.","definition_xrefs":["GOC:nc","GOC:bf","GOC:BHF","PMID:19017797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CSF1-CSF1R complex","synonyms":[{"name":"CSF1:C-FMS complex","type":"exact"},{"name":"M-CSF:C-FMS complex","type":"related"},{"name":"M-CSF:CSF1R complex","type":"related"},{"name":"M-CSF:FMS complex","type":"exact"},{"name":"macrophage colony-stimulating factor:receptor complex","type":"exact"}],"termid":"GO:1990682"}


id: PBO:0067046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 66, pseudogene","termid":"PBO:0067046"}


id: FYPO:0002724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and undergoes one or two rounds of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, abnormal cell shape","termid":"FYPO:0002421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, elongated cell","synonyms":[{"name":"inviable following spore germination, single or double cell division, elongated cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, elongated cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, elongated cell","type":"exact"}],"termid":"FYPO:0002724"}


id: PBO:0055563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2999","termid":"PBO:0055563"}


id: PBO:0073678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 1","termid":"PBO:0073678"}


id: GO:0019844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of any microbial toxin that cannot be easily separated from the structure of the cell.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete endotoxin activity (obsolete GO:0019844)","synonyms":[{"name":"endotoxin activity","type":"exact"}],"termid":"GO:0019844"}


id: FYPO:0001706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ionizing radiation. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"},{"relation_name":"is_a","term_name":"normal cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0001927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"normal DNA damage checkpoint during cellular response to ionizing radiation during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation during cellular response to ionizing radiation","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to gamma radiation","type":"narrow"},{"name":"normal mitotic DNA damage checkpoint during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during gamma irradiation","type":"narrow"}],"termid":"FYPO:0001706"}


id: PBO:0057543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 659","termid":"PBO:0057543"}


id: PBO:0063137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvin beta","termid":"PBO:0063137"}


id: GO:0021882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","PMID:16226447"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment (obsolete GO:0021882)","termid":"GO:0021882"}


id: PBO:0075253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 5","termid":"PBO:0075253"}


id: PATO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces east.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left","termid":"PATO:0000366"}


id: PBO:0073355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family C member 1","termid":"PBO:0073355"}


id: GO:0016911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SAP kinase 4 activity (obsolete GO:0016911)","synonyms":[{"name":"SAP kinase 4 activity","type":"exact"},{"name":"SAPK4","type":"exact"}],"termid":"GO:0016911"}


id: GO:0005965
data:
  {"annotated_genes":["SJAG_04923","SJAG_02583"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86696,97527],"is_not":false,"summary":null,"term":"GO:0005965"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses protein farnesyltransferase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyl diphosphate synthase complex","termid":"GO:0032476"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein farnesyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005965","terms_by_termid":{"GO:0005965":null}}


id: PBO:0085595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern, and bud at the proximal pole; BUD8 has a paralog, BUD9, that arose from the whole genome duplication","termid":"PBO:0085595"}


id: PBO:0064624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C like domain containing 1","termid":"PBO:0064624"}


id: GO:0031667
data:
  {"annotated_genes":["SJAG_04054","SJAG_04873","SJAG_03266","SJAG_03048","SJAG_03911","SJAG_00209","SJAG_04743","SJAG_01509","SJAG_02496","SJAG_01162","SJAG_00457","SJAG_01970","SJAG_03256","SJAG_04637","SJAG_00169","SJAG_02973","SJAG_04677","SJAG_00233","SJAG_02699","SJAG_00380","SJAG_04268","SJAG_04031","SJAG_01245","SJAG_02424","SJAG_01184","SJAG_03519","SJAG_03486","SJAG_03473","SJAG_04067","SJAG_00359","SJAG_02380","SJAG_02026","SJAG_04032","SJAG_04725","SJAG_03309","SJAG_03319","SJAG_03371","SJAG_00534","SJAG_00781","SJAG_00256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97661,113846,90411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[102369,71044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"},{"annotations":[87442,85575,90816,105802,91361,107085,84193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[112616,96573,89100,107498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042149"},{"annotations":[90241,90249,88581,99926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010106"},{"annotations":[101338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[109473,103705,109472,111916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016036"},{"annotations":[114469,90767,105391,97251,94695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009267"},{"annotations":[111706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[99972],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901481"},{"annotations":[98939,99975],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901482"},{"annotations":[97345,110878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019740"},{"annotations":[84026,97516],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"},{"annotations":[98527],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"},{"annotations":[85010,109970],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00233":null,"SJAG_00256":null,"SJAG_00359":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00534":null,"SJAG_00781":null,"SJAG_01162":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01509":null,"SJAG_01970":null,"SJAG_02026":null,"SJAG_02380":null,"SJAG_02424":null,"SJAG_02496":null,"SJAG_02699":null,"SJAG_02973":null,"SJAG_03048":null,"SJAG_03256":null,"SJAG_03266":null,"SJAG_03309":null,"SJAG_03319":null,"SJAG_03371":null,"SJAG_03473":null,"SJAG_03486":null,"SJAG_03519":null,"SJAG_03911":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04054":null,"SJAG_04067":null,"SJAG_04268":null,"SJAG_04637":null,"SJAG_04677":null,"SJAG_04725":null,"SJAG_04743":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nutrient levels","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031667","terms_by_termid":{"GO:0000433":null,"GO:0006808":null,"GO:0009267":null,"GO:0010106":null,"GO:0016036":null,"GO:0019676":null,"GO:0019740":null,"GO:0031142":null,"GO:0034198":null,"GO:0036245":null,"GO:0042149":null,"GO:1901481":null,"GO:1901482":null,"GO:1904547":null,"GO:1905287":null}}


id: GO:0098637
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is capable of carrying out some part of the process of cell-matrix adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell adhesion","termid":"GO:0098636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"}


id: PBO:0028586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_filament_bundle_assembly","termid":"PBO:0028586"}


id: FYPO:0001110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology (i.e. size, shape, and structure) that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, normal morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, normal morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, normal morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, normal morphology","type":"exact"}],"termid":"FYPO:0001110"}


id: PBO:0039217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C8","termid":"PBO:0039217"}


id: GO:0042855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of eugenol, a colorless, aromatic, liquid hydrocarbon (C10H12O2) found in clove oil.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"eugenol metabolic process","termid":"GO:0042854"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"eugenol biosynthetic process","synonyms":[{"name":"4-allyl-2-methoxyphenol biosynthesis","type":"exact"},{"name":"4-allyl-2-methoxyphenol biosynthetic process","type":"exact"},{"name":"eugenic acid biosynthesis","type":"exact"},{"name":"eugenic acid biosynthetic process","type":"exact"},{"name":"eugenol anabolism","type":"exact"},{"name":"eugenol biosynthesis","type":"exact"},{"name":"eugenol formation","type":"exact"},{"name":"eugenol synthesis","type":"exact"}],"termid":"GO:0042855"}


id: GO:0060220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a photoreceptor cell in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell fate commitment","termid":"GO:0042706"},{"relation_name":"part_of","term_name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"}


id: GO:0004470
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"malic enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyruvic-malic carboxylase activity","type":"related"}],"termid":"GO:0004470","terms_by_termid":{"GO:0004471":null}}


id: FYPO:0001718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malonic acid into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal malonic acid import","termid":"FYPO:0001717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased malonic acid import","synonyms":[{"name":"decreased malonate import","type":"related"},{"name":"decreased malonic acid import across plasma membrane","type":"exact"},{"name":"decreased malonic acid import during mitotic cell cycle","type":"related"},{"name":"decreased malonic acid import during vegetative growth","type":"exact"},{"name":"decreased malonic acid import into cell","type":"exact"},{"name":"decreased malonic acid uptake","type":"exact"},{"name":"reduced malonic acid import","type":"exact"}],"termid":"FYPO:0001718"}


id: GO:0099126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex acting as ligand of the transforming growth factor beta receptor complex, typically a homodimer of any of the TFGbeta isoforms. The precursor of TGFbeta proteins is cleaved into mature TGFbeta and the latency-associated peptide (LAP), which remains non-covalently linked to mature TGFbeta rendering it inactive. TGFbeta is activated by dimerization and dissociation of the LAP.","definition_xrefs":["GOC:bhm","PMID:22943793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transforming growth factor beta complex","synonyms":[{"name":"TGF-beta complex","type":"exact"},{"name":"TGF-beta dimer","type":"exact"},{"name":"TGFB complex","type":"exact"},{"name":"TGFB dimer","type":"exact"},{"name":"TGFbeta complex","type":"exact"},{"name":"TGFbeta dimer","type":"exact"}],"termid":"GO:0099126"}


id: PBO:0028184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_copper","termid":"PBO:0028184"}


id: PBO:0040295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3","termid":"PBO:0040295"}


id: PBO:0069080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 327, pseudogene","termid":"PBO:0069080"}


id: PBO:0060672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nedd4 family interacting protein 1 pseudogene 1","termid":"PBO:0060672"}


id: PBO:0039226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT serine/threonine kinase 1","termid":"PBO:0039226"}


id: PBO:0070184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 102 pseudogene","termid":"PBO:0070184"}


id: GO:0015143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of urate from one side of a membrane to the other. Urate is the anion of uric acid, 2,6,8-trioxypurine, the end product of purine metabolism in certain mammals and the main excretory product in uricotelic animals.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salt transmembrane transporter activity","termid":"GO:1901702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"urate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-2872497","Reactome:R-HSA-561253","Reactome:R-HSA-5625210"],"synonyms":[{"name":"uric acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0015143"}


id: GO:0030123
data:
  {"annotated_genes":["SJAG_02453","SJAG_00108","SJAG_03726","SJAG_04931"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85068,90322,92270,107618],"is_not":false,"summary":null,"term":"GO:0030123"}]},"cv_name":"cellular_component","definition":"A heterotetrameric AP-type membrane coat adaptor complex that consists of beta3, delta, mu3 and sigma3 subunits and is found associated with endosomal membranes. AP-3 does not appear to associate with clathrin in all organisms. In at least humans, the AP-3 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (beta3A and beta3B, mu3A and mu3B, and sigma3A and sigma3B).","definition_xrefs":["PMID:21097499","GOC:mah","PMID:10611976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_02453":null,"SJAG_03726":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"AP-3 adaptor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030123","terms_by_termid":{"GO:0030123":null}}


id: GO:0047533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopentanoate + NADP+ + H2O = 2-oxoglutarate + NADPH + H+.","definition_xrefs":["MetaCyc:25-DIOXOVALERATE-DEHYDROGENASE-RXN","EC:1.2.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,5-dioxovalerate dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:11296"],"synonyms":[{"name":"2,5-dioxopentanoate:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047533"}


id: GO:0050125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzyloxycarbonylglycine + H2O + H+ = benzyl alcohol + CO2 + glycine.","definition_xrefs":["RHEA:20900","EC:3.5.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"N-benzyloxycarbonylglycine hydrolase activity","secondary_identifiers":["MetaCyc:N-BENZYLOXYCARBONYLGLYCINE-HYDROLASE-RXN","KEGG_REACTION:R02551"],"synonyms":[{"name":"N-benzyloxycarbonylglycine urethanehydrolase activity","type":"related"},{"name":"benzyloxycarbonylglycine hydrolase activity","type":"related"},{"name":"nalpha-benzyloxycarbonyl amino acid urethane hydrolase I","type":"related"},{"name":"nalpha-benzyloxycarbonyl amino acid urethane hydrolase activity","type":"related"},{"name":"nalpha-carbobenzoxyamino acid amidohydrolase activity","type":"related"}],"termid":"GO:0050125"}


id: PBO:0050261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 39","termid":"PBO:0050261"}


id: PBO:0048688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIPR1 antisense RNA 1","termid":"PBO:0048688"}


id: PBO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAP receptor, synaptobrevin family","termid":"PBO:0001976"}


id: GO:0042276
data:
  {"annotated_genes":["SJAG_16460","SJAG_04791","SJAG_00611","SJAG_02667","SJAG_04089","SJAG_00573","SJAG_04190","SJAG_03906","SJAG_00153"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92017,95440,99015,99035,100121,100361,109701,113441],"is_not":false,"summary":null,"term":"GO:0042276"},{"annotations":[107890],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across the lesion. This process does not remove the replication-blocking lesions and causes an increase in the endogenous mutation level. For example, in E. coli, a low fidelity DNA polymerase, pol V, copies lesions that block replication fork progress. This produces mutations specifically targeted to DNA template damage sites, but it can also produce mutations at undamaged sites.","definition_xrefs":["GOC:jl","PMID:11485998","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translesion synthesis","termid":"GO:0019985"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_02667":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"error-prone translesion synthesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"error-prone postreplication DNA repair","type":"related"},{"name":"mutagenic PRR","type":"exact"},{"name":"mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:0042276","terms_by_termid":{"GO:0042276":null,"GO:1904332":null}}


id: GO:0060299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of sarcomere organization","termid":"GO:0060297"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"sarcomere organization","termid":"GO:0045214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of sarcomere organization","synonyms":[{"name":"negative regulation of sarcomere organisation","type":"exact"}],"termid":"GO:0060299"}


id: PBO:0055323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2751","termid":"PBO:0055323"}


id: GO:0051004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of the enzyme lipoprotein lipase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipase activity","termid":"GO:0060191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipoprotein lipase activity","termid":"GO:0051004"}


id: PBO:0029341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nickel","termid":"PBO:0029341"}


id: GO:0035539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-7,8-dihydrodeoxyguanosine-triphosphate (8-oxo-dGTP) + H2O = 8-oxo-7,8-dihydrodeoxyguanosine phosphate (8-oxo-dGMP) + diphosphate. 8-oxo-dGTP is the oxidised form of the free guanine nucleotide and can act as a potent mutagenic substrate for DNA synthesis causing transversion mutations. 8-oxo-dGTPase hydrolyses 8-oxo-dGTP to its monophosphate form to prevent the misincorporation of 8-oxo-dGTP into cellular DNA.","definition_xrefs":["PMID:7859359","PMID:17804481","PMID:7782328","RHEA:31575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0047429"],"is_obsolete":false,"name":"8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity","secondary_identifiers":["Reactome:R-HSA-2395849","EC:3.6.1.55","Reactome:R-HSA-9750555","Reactome:R-HSA-2395869"],"synonyms":[{"name":"8-oxo-7,8-dihydro-2'-deoxyguanosine 5'-triphosphate pyrophosphohydrolase activity","type":"exact"},{"name":"8-oxo-7,8-dihydro-deoxyguanosine triphosphate pyrophosphatase activity","type":"exact"},{"name":"8-oxo-7,8-dihydrodeoxyguanosine triphosphatase activity","type":"exact"},{"name":"8-oxo-dGTP pyrophosphohydrolase activity","type":"exact"},{"name":"8-oxo-dGTPase activity","type":"exact"}],"termid":"GO:0035539"}


id: PBO:0064393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase","termid":"PBO:0064393"}


id: GO:1904412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac ventricle development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19590510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac ventricle development","termid":"GO:1904412"}


id: PBO:0053481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 456","termid":"PBO:0053481"}


id: GO:0032085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a type II restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of type II site-specific deoxyribonuclease activity","synonyms":[{"name":"regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type II restriction endodeoxyribonuclease regulator","type":"related"},{"name":"type II restriction enzyme regulator","type":"related"}],"termid":"GO:0032085"}


id: PBO:0038634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitase 2","termid":"PBO:0038634"}


id: SO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for plastid LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_rRNA_gene","termid":"SO:0002366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_LSU_rRNA_gene","synonyms":[{"name":"plastid large subunit rRNA gene","type":"exact"}],"termid":"SO:0002367"}


id: PBO:0048398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 5","termid":"PBO:0048398"}


id: PBO:0080263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 26 pseudogene","termid":"PBO:0080263"}


id: MOD:01799
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to a methylated serine, such as N-methylserine, N,N-dimethylserine, or N,N,N-trimethylserine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated serine","synonyms":[{"name":"MeSer","type":"exact"}],"termid":"MOD:01799"}


id: GO:1900721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of uterine smooth muscle relaxation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of uterine smooth muscle relaxation","termid":"GO:1900719"},{"relation_name":"is_a","term_name":"positive regulation of relaxation of smooth muscle","termid":"GO:1901082"},{"relation_name":"positively_regulates","term_name":"uterine smooth muscle relaxation","termid":"GO:0044558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of uterine smooth muscle relaxation","synonyms":[{"name":"activation of smooth muscle relaxation of the uterus","type":"exact"},{"name":"activation of uterine smooth muscle relaxation","type":"narrow"},{"name":"positive regulation of smooth muscle relaxation of the uterus","type":"exact"},{"name":"up regulation of smooth muscle relaxation of the uterus","type":"exact"},{"name":"up regulation of uterine smooth muscle relaxation","type":"exact"},{"name":"up-regulation of smooth muscle relaxation of the uterus","type":"exact"},{"name":"up-regulation of uterine smooth muscle relaxation","type":"exact"},{"name":"upregulation of smooth muscle relaxation of the uterus","type":"exact"},{"name":"upregulation of uterine smooth muscle relaxation","type":"exact"}],"termid":"GO:1900721"}


id: PBO:0044044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and serine rich nuclear protein 1","termid":"PBO:0044044"}


id: FYECO:0000217
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown for more than 24 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth >24 hrs","synonyms":[{"name":"growth >24 hours","type":"exact"}],"termid":"FYECO:0000217"}


id: PBO:0086067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that interacts with Ulp1p; a Ubl (ubiquitin-like protein)-specific protease for Smt3p protein conjugates","termid":"PBO:0086067"}


id: PBO:0110236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex/ Las1 complex endonuclease Las1","termid":"PBO:0110236"}


id: PBO:0042310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 4","termid":"PBO:0042310"}


id: _global:derives_from
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"'Entity A' derives_from 'Entity B' implies that 'Entity A' is chemically derived from 'Entity B'.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derives_from","termid":"_global:derives_from"}


id: GO:0050806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"positively_regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of synaptic transmission","synonyms":[{"name":"activation of synaptic transmission","type":"narrow"},{"name":"stimulation of synaptic transmission","type":"narrow"},{"name":"up regulation of synaptic transmission","type":"exact"},{"name":"up-regulation of synaptic transmission","type":"exact"},{"name":"upregulation of synaptic transmission","type":"exact"}],"termid":"GO:0050806"}


id: GO:0030397
data:
  {"annotated_genes":["SJAG_02100","SJAG_04578","SJAG_00840","SJAG_00680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007077"},{"annotations":[99805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[90055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034496"},{"annotations":[89973,99808],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905557"}]},"cv_name":"biological_process","definition":"The controlled breakdown of any cell membrane in the context of a normal process such as autophagy.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_00840":null,"SJAG_02100":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane breakdown","type":"exact"},{"name":"membrane catabolism","type":"exact"},{"name":"membrane degradation","type":"exact"}],"termid":"GO:0030397","terms_by_termid":{"GO:0007077":null,"GO:0034496":null,"GO:0140516":null,"GO:1905557":null}}


id: GO:1901332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lateral root development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of lateral root development","termid":"GO:2000023"},{"relation_name":"negatively_regulates","term_name":"lateral root development","termid":"GO:0048527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lateral root development","synonyms":[{"name":"down regulation of lateral root development","type":"exact"},{"name":"down-regulation of lateral root development","type":"exact"},{"name":"downregulation of lateral root development","type":"exact"},{"name":"inhibition of lateral root development","type":"narrow"}],"termid":"GO:1901332"}


id: GO:0150158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-34 production.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-34 production","termid":"GO:0150157"},{"relation_name":"positively_regulates","term_name":"interleukin-34 production","termid":"GO:0150155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-34 production","secondary_identifiers":["GO:0150161"],"synonyms":[{"name":"positive regulation of interleukin-34 biosynthetic process","type":"narrow"}],"termid":"GO:0150158"}


id: PR:Q10483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UBX domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17C9.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.11c","secondary_identifiers":["UniProtKB:Q10483"],"synonyms":[{"name":"Spom972h-UBXN1","type":"exact"}],"termid":"PR:Q10483"}


id: GO:0097287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.","definition_xrefs":["PMID:364423","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine metabolic process","synonyms":[{"name":"7-cyano-7-deazaguanine metabolism","type":"exact"}],"termid":"GO:0097287"}


id: GO:0052118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis in host environment (obsolete GO:0052118)","synonyms":[{"name":"positive energy taxis in response to host environment","type":"exact"}],"termid":"GO:0052118"}


id: PBO:0016057
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human C9orf64","termid":"PBO:0016057"}


id: PATO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000421 nutritional value (obsolete PATO:0000421)","termid":"PATO:0000421"}


id: GO:0000979
data:
  {"annotated_genes":["SJAG_02458","SJAG_00421","SJAG_00741","SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85438,90285,91726,108017],"is_not":false,"summary":null,"term":"GO:0000979"}]},"cv_name":"molecular_function","definition":"Binding to a DNA sequence that is part of the core promoter of a RNA polymerase II-transcribed gene.","definition_xrefs":["GOC:pg","GOC:txnOH","PMID:12381658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding","termid":"GO:0000977"},{"relation_name":"is_a","term_name":"core promoter sequence-specific DNA binding","termid":"GO:0001046"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00698":null,"SJAG_00741":null,"SJAG_02458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488","GO:0000976"],"is_obsolete":false,"name":"RNA polymerase II core promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000979","terms_by_termid":{"GO:0000979":null}}


id: GO:0106339
data:
  {"annotated_genes":["SJAG_01269"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93995],"is_not":false,"summary":null,"term":"GO:0106339"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cytosine32 in tRNA= S-adenosyl-L-homocysteine + 2'-O-methylcytidine32 in tRNA.","definition_xrefs":["PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (cytidine) methyltransferase activity","termid":"GO:0016427"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01269":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0016740","GO:0003824","GO:0016741","GO:0140098"],"is_obsolete":false,"name":"tRNA (cytidine(32)-2'-O)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-11866","EC:2.1.1.205","RHEA:42396"],"synonyms":[{"name":"tRNA (cytidine 32-2'-O)-methyltransferase activity","type":"exact"}],"termid":"GO:0106339","terms_by_termid":{"GO:0106339":null}}


id: PBO:0041666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK2 associated cullin domain 1","termid":"PBO:0041666"}


id: SO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif comprising two helices separated by a turn.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"has_part","term_name":"peptide_helix","termid":"SO:0001114"},{"relation_name":"has_part","term_name":"polypeptide_turn_motif","termid":"SO:0001128"},{"relation_name":"is_a","term_name":"polypeptide_structural_motif","termid":"SO:0001079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"helix_turn_helix","secondary_identifiers":["BS:00147"],"synonyms":[{"name":"HTH","type":"related"},{"name":"helix turn helix","type":"exact"},{"name":"helix-turn-helix","type":"exact"}],"termid":"SO:0001081"}


id: PBO:0065848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11B antisense RNA 1","termid":"PBO:0065848"}


id: GO:0060870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of the cell wall that contributes to the process of floral organ abscission.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall modification involved in abscission","termid":"GO:0009830"},{"relation_name":"part_of","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall disassembly involved in floral organ abscission","termid":"GO:0060870"}


id: PBO:0053697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 898","termid":"PBO:0053697"}


id: PBO:0065292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired related homeobox 2","termid":"PBO:0065292"}


id: SO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons AAT and AAC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine","synonyms":[{"name":"Asn","type":"exact"},{"name":"N","type":"exact"}],"termid":"SO:0001449"}


id: FYPO:0000863
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000862"},{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere inner repeat during vegetative growth","termid":"FYPO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3 K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 dimethylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal histone H3K9me2 at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000863"}


id: GO:0035191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise asymmetric spreading out of nuclei internally along the anterior-posterior axis of the developing insect embryo during mitotic cycles 4 to 6. This movement leads to the distribution of nuclei in a hollow ellipsoid underlying the cortex.","definition_xrefs":["PMID:8314839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytial nuclear migration","termid":"GO:0035190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nuclear axial expansion","synonyms":[{"name":"nuclear distribution along anterior-posterior axis","type":"exact"},{"name":"nucleus distribution along anterior-posterior axis","type":"exact"}],"termid":"GO:0035191"}


id: FYPO:0003365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pyridoxine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal pyridoxine import","synonyms":[{"name":"abnormal pyridoxine import across plasma membrane","type":"exact"},{"name":"abnormal pyridoxine import during mitotic cell cycle","type":"related"},{"name":"abnormal pyridoxine import during vegetative growth","type":"exact"},{"name":"abnormal pyridoxine import into cell","type":"exact"},{"name":"abnormal pyridoxine uptake","type":"exact"}],"termid":"FYPO:0003365"}


id: GO:1903824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomere single strand break repair.","definition_xrefs":["PMID:24374808","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of single strand break repair","termid":"GO:1903517"},{"relation_name":"negatively_regulates","term_name":"telomere single strand break repair","termid":"GO:1903823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomere single strand break repair","synonyms":[{"name":"down regulation of single strand break repair in telomere","type":"exact"},{"name":"down regulation of telomere SSBR","type":"related"},{"name":"down regulation of telomere single strand break repair","type":"exact"},{"name":"down regulation of telomere single-strand break repair","type":"exact"},{"name":"down regulation of telomeric single strand break repair","type":"exact"},{"name":"down-regulation of single strand break repair in telomere","type":"exact"},{"name":"down-regulation of telomere SSBR","type":"related"},{"name":"down-regulation of telomere single strand break repair","type":"exact"},{"name":"down-regulation of telomere single-strand break repair","type":"exact"},{"name":"down-regulation of telomeric single strand break repair","type":"exact"},{"name":"downregulation of single strand break repair in telomere","type":"exact"},{"name":"downregulation of telomere SSBR","type":"related"},{"name":"downregulation of telomere single strand break repair","type":"exact"},{"name":"downregulation of telomere single-strand break repair","type":"exact"},{"name":"downregulation of telomeric single strand break repair","type":"exact"},{"name":"inhibition of single strand break repair in telomere","type":"narrow"},{"name":"inhibition of telomere SSBR","type":"related"},{"name":"inhibition of telomere single strand break repair","type":"narrow"},{"name":"inhibition of telomere single-strand break repair","type":"narrow"},{"name":"inhibition of telomeric single strand break repair","type":"narrow"},{"name":"negative regulation of single strand break repair in telomere","type":"exact"},{"name":"negative regulation of telomere SSBR","type":"related"},{"name":"negative regulation of telomere single-strand break repair","type":"exact"},{"name":"negative regulation of telomeric single strand break repair","type":"exact"}],"termid":"GO:1903824"}


id: GO:0004805
data:
  {"annotated_genes":["SJAG_01646","SJAG_00129","SJAG_01427","SJAG_00182","SJAG_01531","SJAG_01862"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73475,87987,89474,92668,93290,97195],"is_not":false,"summary":null,"term":"GO:0004805"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha,alpha-trehalose 6-phosphate + H2O = alpha,alpha-trehalose + phosphate.","definition_xrefs":["EC:3.1.3.12","RHEA:23420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trehalose-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TREHALOSEPHOSPHA-RXN"],"synonyms":[{"name":"trehalose 6-phosphatase activity","type":"related"},{"name":"trehalose 6-phosphate phosphatase activity","type":"related"},{"name":"trehalose phosphatase activity","type":"exact"},{"name":"trehalose-6-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0004805","terms_by_termid":{"GO:0004805":null}}


id: GO:0010678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cellular process that decreases the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates carried out by repression of transcription.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-templated (obsolete GO:0010678)","synonyms":[{"name":"negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-dependent","type":"exact"},{"name":"negative regulation of cellular carbohydrate metabolic process by repression of transcription","type":"exact"},{"name":"negative regulation of cellular carbohydrate metabolic process by transcriptional repression","type":"exact"}],"termid":"GO:0010678"}


id: FYPO:0007781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the transition from yeast-form to hyphal growth begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0007773","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of hyphal transition","synonyms":[{"name":"delayed hyphal transition","type":"exact"},{"name":"delayed onset of transition to hyphal growth","type":"exact"}],"termid":"FYPO:0007781"}


id: PATO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having or existing in many phases.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyphasic","termid":"PATO:0001774"}


id: GO:0032378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"regulation of intracellular lipid transport","termid":"GO:0032377"},{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"negatively_regulates","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular lipid transport","synonyms":[{"name":"down regulation of intracellular lipid transport","type":"exact"},{"name":"down-regulation of intracellular lipid transport","type":"exact"},{"name":"downregulation of intracellular lipid transport","type":"exact"},{"name":"inhibition of intracellular lipid transport","type":"narrow"}],"termid":"GO:0032378"}


id: PBO:0035771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035771"}


id: PBO:0040320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit delta","termid":"PBO:0040320"}


id: PBO:0064573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porcupine O-acyltransferase","termid":"PBO:0064573"}


id: SO:1000044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal mutation. Rearrangements that alter the pairing of telomeres are classified as translocations.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation","termid":"SO:0000199"},{"relation_name":"is_a","term_name":"interchromosomal_mutation","termid":"SO:1000031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_translocation","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_translocation"],"synonyms":[{"name":"(Drosophila)T","type":"related"},{"name":"(fungi)T","type":"related"},{"name":"chromosomal translocation","type":"exact"}],"termid":"SO:1000044"}


id: GO:0070122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of an isopeptide bond. An isopeptide bond is an amide linkage between a carboxyl group of one amino acid and an amino group of another amino acid in which at least one of these groups is not on the a-carbon of one of the amino acids (for example, the link between an epsilon-amino group of a lysine molecule to a carboxyl group on a second amino acid is an isopeptide bond).","definition_xrefs":["GOC:mah","Wikipedia:Isopeptidase"],"gene_count":0,"genotype_count":0,"name":"obsolete isopeptidase activity (obsolete GO:0070122)","termid":"GO:0070122"}


id: PBO:0039210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C1","termid":"PBO:0039210"}


id: SO:0000985
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a nucleotide polymer has two strands that are reverse-complement to one another and pair together.","direct_ancestors":[{"relation_name":"is_a","term_name":"strand_attribute","termid":"SO:0000983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double","termid":"SO:0000985"}


id: GO:0004928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a member of the Wnt-family of signaling molecules to initiate a change in cell activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete frizzled receptor activity (obsolete GO:0004928)","synonyms":[{"name":"frizzled receptor activity","type":"exact"}],"termid":"GO:0004928"}


id: PBO:0047982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member J, pseudogene","termid":"PBO:0047982"}


id: GO:1902859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionyl-CoA.","definition_xrefs":["PMID:15514053","GOC:TermGenie","GOC:mengo_curators","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"propionyl-CoA metabolic process","termid":"GO:1902858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0008150","GO:0055086","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"propionyl-CoA catabolic process","synonyms":[{"name":"propionyl-CoA breakdown","type":"exact"},{"name":"propionyl-CoA catabolism","type":"exact"},{"name":"propionyl-CoA degradation","type":"exact"}],"termid":"GO:1902859"}


id: PATO:0000929
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000929 light intensivity sensitivity (obsolete PATO:0000929)","termid":"PATO:0000929"}


id: PBO:0048861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 6","termid":"PBO:0048861"}


id: GO:0006223
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88104],"is_not":false,"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates uracil, 2,4-dioxopyrimidine, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase salvage","termid":"GO:0043100"},{"relation_name":"is_a","term_name":"uracil biosynthetic process","termid":"GO:0046107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"uracil salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006223","terms_by_termid":{"GO:0006223":null}}


id: GO:0045270
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the plasma membrane-associated Fo proteins; rotates within the catalytic core during catalysis. Examples of this component are found in Bacterial species.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase, central stalk","termid":"GO:0045269"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane proton-transporting ATP synthase complex, catalytic core F(1)","termid":"GO:0045262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane proton-transporting ATP synthase, central stalk","synonyms":[{"name":"hydrogen-transporting ATP synthase, central stalk","type":"broad"},{"name":"proton-transporting ATP synthase, central stalk","type":"broad"}],"termid":"GO:0045270"}


id: PBO:0078033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 23","termid":"PBO:0078033"}


id: PBO:0086232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with glycerol 3-phosphatase; plays a role in anaerobic glycerol production; localizes to the nucleus and cytosol","termid":"PBO:0086232"}


id: GO:0000422
data:
  {"annotated_genes":["SJAG_05017","SJAG_00645","SJAG_04655","SJAG_00059","SJAG_01274","SJAG_01382","SJAG_00115","SJAG_04219","SJAG_05261","SJAG_02414","SJAG_01251","SJAG_06309","SJAG_01783","SJAG_02699","SJAG_03435","SJAG_03100","SJAG_03851","SJAG_04759","SJAG_01561","SJAG_01135","SJAG_01876","SJAG_01283","SJAG_04963","SJAG_04232","SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71658,86235,91584,93747,94741,96416,99727,104776,105900,107819,109783],"is_not":false,"summary":null,"term":"GO:0000422"},{"annotations":[113927,85209,88752,89035,94020,95830,90769,96113,100948,111351,84008,91108,87752,106796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[67926],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903599"}]},"cv_name":"biological_process","definition":"The autophagic process in which mitochondria are delivered to a type of vacuole and degraded in response to changing cellular conditions.","definition_xrefs":["GOC:autophagy","PMID:15798367","PMID:19289147","PMID:23065344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"},{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00115":null,"SJAG_00645":null,"SJAG_01135":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02414":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_03435":null,"SJAG_03851":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04759":null,"SJAG_04963":null,"SJAG_05017":null,"SJAG_05261":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0007005","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"autophagy of mitochondrion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrion degradation","type":"broad"},{"name":"mitochondrion disassembly","type":"broad"},{"name":"mitophagy","type":"narrow"}],"termid":"GO:0000422","terms_by_termid":{"GO:0000422":null,"GO:0000423":null,"GO:1903599":null}}


id: PBO:0042865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 97","termid":"PBO:0042865"}


id: PBO:0029097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cysteine_synthase_activity","termid":"PBO:0029097"}


id: PBO:0067334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 426, pseudogene","termid":"PBO:0067334"}


id: PBO:0039930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 35","termid":"PBO:0039930"}


id: PBO:0077851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1 pseudogene 2","termid":"PBO:0077851"}


id: PBO:0027917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_growth_on_myriocin","termid":"PBO:0027917"}


id: GO:0048635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"muscle organ development","termid":"GO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle organ development","synonyms":[{"name":"down regulation of muscle development","type":"exact"},{"name":"down-regulation of muscle development","type":"exact"},{"name":"downregulation of muscle development","type":"exact"},{"name":"inhibition of muscle development","type":"narrow"}],"termid":"GO:0048635"}


id: GO:0044078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont organism activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport, in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host receptor-mediated endocytosis (obsolete GO:0044078)","synonyms":[{"name":"positive regulation of host receptor-mediated endocytosis by symbiont","type":"exact"}],"termid":"GO:0044078"}


id: GO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-alanine, 3-aminopropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"beta-alanine transport","termid":"GO:0001762"}


id: PBO:0052623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 2","termid":"PBO:0052623"}


id: PBO:0070008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1305, pseudogene","termid":"PBO:0070008"}


id: PBO:0072365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 51","termid":"PBO:0072365"}


id: GO:0009167
data:
  {"annotated_genes":["SJAG_02850","SJAG_04123","SJAG_02038","SJAG_04681","SJAG_02364","SJAG_01859","SJAG_03355","SJAG_01070","SJAG_01081","SJAG_00964","SJAG_01298","SJAG_03140","SJAG_04849","SJAG_01814","SJAG_06634","SJAG_04634","SJAG_00044","SJAG_01661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99561,85044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[93949,95702,106378,113473,99562,115078,110633,106489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[94273,97946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046033"},{"annotations":[89669,112972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[97324,59022,104398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[63715,98374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046037"},{"annotations":[89889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[115079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[85047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046040"},{"annotations":[97947,89891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[89893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine ribonucleoside monophosphate, a compound consisting of a purine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate metabolic process","termid":"GO:0009161"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02038":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04849":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009167","terms_by_termid":{"GO:0006177":null,"GO:0006188":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null,"GO:0046033":null,"GO:0046037":null,"GO:0046040":null}}


id: FYPO:0001595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of serine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal serine import","termid":"FYPO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased serine import","synonyms":[{"name":"decreased L-serine import","type":"exact"},{"name":"decreased L-serine import across plasma membrane","type":"exact"},{"name":"decreased serine import during mitotic cell cycle","type":"related"},{"name":"decreased serine import during vegetative growth","type":"exact"},{"name":"decreased serine import into cell","type":"exact"},{"name":"decreased serine uptake","type":"exact"},{"name":"reduced serine import","type":"exact"}],"termid":"FYPO:0001595"}


id: PBO:0029670
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_division,_large_and_small_daughter_cells","termid":"PBO:0029670"}


id: GO:0044575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a cellulosome, a macromolecular multi-enzyme complex in bacteria that facilitates the breakdown of cellulase, hemicellulase and pectin in the plant cell wall.","definition_xrefs":["GOC:mengo_curators","PMID:20373916","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cellulosome assembly","termid":"GO:0044575"}


id: PR:O94238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11127:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.13","secondary_identifiers":["UniProtKB:O94238"],"synonyms":[{"name":"SPAC1805.13","type":"related"},{"name":"Spom972h-RPL14","type":"exact"}],"termid":"PR:O94238"}


id: PBO:0079491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNDC11 antisense RNA 1","termid":"PBO:0079491"}


id: PBO:0053839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1104","termid":"PBO:0053839"}


id: PBO:0003231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-8 family","termid":"PBO:0003231"}


id: GO:1901958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cutin biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23243127","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of cutin biosynthetic process","termid":"GO:1901957"},{"relation_name":"negatively_regulates","term_name":"cutin biosynthetic process","termid":"GO:0010143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cutin biosynthetic process","synonyms":[{"name":"down regulation of cutin anabolism","type":"exact"},{"name":"down regulation of cutin biosynthesis","type":"exact"},{"name":"down regulation of cutin biosynthetic process","type":"exact"},{"name":"down regulation of cutin formation","type":"exact"},{"name":"down regulation of cutin synthesis","type":"exact"},{"name":"down-regulation of cutin anabolism","type":"exact"},{"name":"down-regulation of cutin biosynthesis","type":"exact"},{"name":"down-regulation of cutin biosynthetic process","type":"exact"},{"name":"down-regulation of cutin formation","type":"exact"},{"name":"down-regulation of cutin synthesis","type":"exact"},{"name":"downregulation of cutin anabolism","type":"exact"},{"name":"downregulation of cutin biosynthesis","type":"exact"},{"name":"downregulation of cutin biosynthetic process","type":"exact"},{"name":"downregulation of cutin formation","type":"exact"},{"name":"downregulation of cutin synthesis","type":"exact"},{"name":"inhibition of cutin anabolism","type":"exact"},{"name":"inhibition of cutin biosynthesis","type":"exact"},{"name":"inhibition of cutin biosynthetic process","type":"narrow"},{"name":"inhibition of cutin formation","type":"exact"},{"name":"inhibition of cutin synthesis","type":"exact"},{"name":"negative regulation of cutin anabolism","type":"exact"},{"name":"negative regulation of cutin biosynthesis","type":"exact"},{"name":"negative regulation of cutin formation","type":"exact"},{"name":"negative regulation of cutin synthesis","type":"exact"}],"termid":"GO:1901958"}


id: GO:0047718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indan-1-ol + NAD(P)+ = indanone + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.112","MetaCyc:INDANOL-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indanol dehydrogenase activity","synonyms":[{"name":"indan-1-ol:NAD(P)+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047718"}


id: PBO:0027646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_BE49385A","termid":"PBO:0027646"}


id: GO:1990184
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heteromeric protein complex consisting of a multi-transmembrane spanning subunit (the light chain) and a type II glycoprotein subunit (the heavy chain) that functions to transport amino acids across a plasma membrane.","definition_xrefs":["GOC:kmv","PMID:14668347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"amino acid transport complex","termid":"GO:1990184"}


id: PBO:0064030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 64","termid":"PBO:0064030"}


id: PR:O13940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A low specificity L-threonine aldolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low-specificity L-threonine aldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.09c","secondary_identifiers":["UniProtKB:O13940"],"synonyms":[{"name":"Spom972h-ltaE","type":"exact"}],"termid":"PR:O13940"}


id: PBO:0110980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 2 (H blood group)","termid":"PBO:0110980"}


id: GO:0061459
data:
  {"annotated_genes":["SJAG_03256","SJAG_03400","SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93508,96497,99979],"is_not":false,"summary":null,"term":"GO:0061459"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-arginine from one side of a membrane to the other.","definition_xrefs":["GOC:dph","RHEA:32143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-arginine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN66-448","GO:0005288","GO:0015598","GO:0015181","GO:0102022"],"synonyms":[{"name":"ATP-dependent L-arginine transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled L-arginine transmembrane transporter activity","type":"narrow"},{"name":"L-arginine transporter activity","type":"exact"},{"name":"L-arginine-importing ATPase activity","type":"narrow"},{"name":"arginine permease activity","type":"broad"},{"name":"arginine porter activity","type":"narrow"},{"name":"arginine transmembrane transporter activity","type":"exact"},{"name":"arginine-importing ATPase activity","type":"narrow"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"}],"termid":"GO:0061459","terms_by_termid":{"GO:0061459":null}}


id: GO:0042762
data:
  {"annotated_genes":["SJAG_02380","SJAG_02406","SJAG_03538","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111601,107499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[109818,85199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving sulfur, the nonmetallic element sulfur or compounds that contain sulfur.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_02380":null,"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of sulfur metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of sulfur metabolism","type":"exact"},{"name":"regulation of sulphur metabolic process","type":"exact"},{"name":"regulation of sulphur metabolism","type":"exact"}],"termid":"GO:0042762","terms_by_termid":{"GO:0090180":null,"GO:2001211":null}}


id: GO:0034568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isoproturon + H2O = formaldehyde + monodemethylisoproturon + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"isoproturon dimethylaminedehydrogenase activity","secondary_identifiers":["EC:1.5.99.-"],"termid":"GO:0034568"}


id: PATO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000135 relative_angle (obsolete PATO:0000135)","termid":"PATO:0000135"}


id: PBO:0056088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ly1 antibody reactive","termid":"PBO:0056088"}


id: PBO:0056327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 9","termid":"PBO:0056327"}


id: PBO:0078119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-1","termid":"PBO:0078119"}


id: GO:0007569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An aging process that has as participant a cell after a cell has stopped dividing. Cell aging may occur when a cell has temporarily stopped dividing through cell cycle arrest (GO:0007050) or when a cell has permanently stopped dividing, in which case it is undergoing cellular senescence (GO:0090398). May precede cell death (GO:0008219) and succeed cell maturation (GO:0048469).","definition_xrefs":["GOC:PO_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell aging (obsolete GO:0007569)","synonyms":[{"name":"cell ageing","type":"exact"}],"termid":"GO:0007569"}


id: GO:0009385
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-mannosamine-6-phosphate = N-acetyl-D-glucosamine-6-phosphate.","definition_xrefs":["MetaCyc:NANE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acylmannosamine-6-phosphate 2-epimerase activity","secondary_identifiers":["RHEA:25257","EC:5.1.3.9"],"synonyms":[{"name":"N-acylmannosamine-6-P epimerase activity","type":"exact"}],"termid":"GO:0009385"}


id: GO:0034151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"regulation of TLR6 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034151"}


id: PBO:0048885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 4","termid":"PBO:0048885"}


id: PBO:0072248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 23","termid":"PBO:0072248"}


id: GO:0102649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + malonyl-CoA + H+ + a holo-[acyl-carrier protein] = acetoacetyl-ACP + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"acetoacetyl-ACP synthase activity","secondary_identifiers":["MetaCyc:RXN-15810"],"termid":"GO:0102649"}


id: GO:0080053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylalanine stimulus.","definition_xrefs":["PMID:15889294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phenylalanine","termid":"GO:0080053"}


id: GO:0004817
data:
  {"annotated_genes":["SJAG_00420"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91717],"is_not":false,"summary":null,"term":"GO:0004817"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys).","definition_xrefs":["EC:6.1.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00420":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0140101","GO:0016874"],"is_obsolete":false,"name":"cysteine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-379887","RHEA:17773","Reactome:R-HSA-380158","MetaCyc:CYSTEINE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"L-cysteine:tRNACys ligase (AMP-forming)","type":"related"},{"name":"cysteine translase activity","type":"related"},{"name":"cysteinyl-tRNA synthetase activity","type":"exact"},{"name":"cysteinyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"cysteinyl-transferRNA synthetase activity","type":"related"}],"termid":"GO:0004817","terms_by_termid":{"GO:0004817":null}}


id: PBO:0081986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 12 pseudogene 1","termid":"PBO:0081986"}


id: PBO:0049060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 68","termid":"PBO:0049060"}


id: PR:O59747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase fusion 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.12c","synonyms":[{"name":"Spom972h-pdf1","type":"exact"}],"termid":"PR:O59747"}


id: PBO:0063092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAQR9 antisense RNA 1","termid":"PBO:0063092"}


id: PBO:0050409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D","termid":"PBO:0050409"}


id: PBO:0062609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily S member 1","termid":"PBO:0062609"}


id: PBO:0043920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary rootlet coiled-coil, rootletin","termid":"PBO:0043920"}


id: PBO:0063561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PELO antisense RNA 1","termid":"PBO:0063561"}


id: GO:0021988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the olfactory lobe over time from its initial formation until its mature state. The olfactory lobe is the area of the brain that process the neural inputs for the sense of smell.","definition_xrefs":["GOC:dgh","GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory lobe development","termid":"GO:0021988"}


id: PBO:0051421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-28 (pseudogene)","termid":"PBO:0051421"}


id: PBO:0061183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 13-1","termid":"PBO:0061183"}


id: PBO:0111336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp7","termid":"PBO:0111336"}


id: PBO:0062578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 2","termid":"PBO:0062578"}


id: PBO:0080184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDAC2 pseudogene 5","termid":"PBO:0080184"}


id: PBO:0058874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9986","termid":"PBO:0058874"}


id: PBO:0075632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2B","termid":"PBO:0075632"}


id: PBO:0041606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA15 pseudogene 3","termid":"PBO:0041606"}


id: PBO:0048261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose mutarotase","termid":"PBO:0048261"}


id: GO:0097014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All of the contents of a cilium, excluding the plasma membrane surrounding the cilium.","definition_xrefs":["GOC:cilia","GOC:dos","PMID:17895364","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection cytoplasm","termid":"GO:0032838"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"ciliary plasm","synonyms":[{"name":"cilial cytoplasm","type":"related"},{"name":"ciliary cytoplasm","type":"related"},{"name":"cilium cytoplasm","type":"related"},{"name":"cilium plasm","type":"exact"},{"name":"microtubule-based flagellar cytoplasm","type":"related"},{"name":"microtubule-based flagellar matrix","type":"narrow"},{"name":"microtubule-based flagellum cytoplasm","type":"related"},{"name":"microtubule-based flagellum matrix","type":"narrow"}],"termid":"GO:0097014"}


id: PBO:0070609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 77","termid":"PBO:0070609"}


id: PBO:0070188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 106 pseudogene","termid":"PBO:0070188"}


id: GO:0032550
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905108"}]},"cv_name":"molecular_function","definition":"Binding to a purine ribonucleoside, a compound consisting of a purine base linked to ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside binding","termid":"GO:0001883"},{"relation_name":"is_a","term_name":"ribonucleoside binding","termid":"GO:0032549"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"purine ribonucleoside binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032550","terms_by_termid":{"GO:1905108":null}}


id: PBO:0064146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKNOX2 antisense RNA 1","termid":"PBO:0064146"}


id: SO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is acylated.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001721 H3K27_acylation_site (obsolete SO:0001721)","synonyms":[{"name":"H3K27 acylation site","type":"exact"},{"name":"H3K27Ac","type":"related"}],"termid":"SO:0001721"}


id: GO:0050149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 2-aminophenol + 3 O2 = 2 isophenoxazine + 6 H2O.","definition_xrefs":["MetaCyc:O-AMINOPHENOL-OXIDASE-RXN","EC:1.10.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"o-aminophenol oxidase activity","secondary_identifiers":["RHEA:40963"],"synonyms":[{"name":"2-aminophenol:O2 oxidoreductase activity","type":"related"},{"name":"2-aminophenol:oxygen oxidoreductase activity","type":"related"},{"name":"GriF","type":"related"},{"name":"isophenoxazine synthase activity","type":"related"},{"name":"o-aminophenol:O2 oxidoreductase activity","type":"related"}],"termid":"GO:0050149"}


id: GO:0030313
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An envelope that surrounds a bacterial cell and includes the cytoplasmic membrane and everything external, encompassing the periplasmic space, cell wall, and outer membrane if present.","definition_xrefs":["GOC:ds","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell envelope","secondary_identifiers":["Wikipedia:Cell_envelope"],"termid":"GO:0030313"}


id: PBO:0027690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_enlarged_around_nucleus","termid":"PBO:0027690"}


id: GO:2001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-arabinofuranose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"L-arabinofuranose binding","termid":"GO:2001084"}


id: GO:1900046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemostasis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"regulates","term_name":"hemostasis","termid":"GO:0007599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemostasis","termid":"GO:1900046"}


id: GO:0018660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-hydroxyphenylacetate + NADH + H+ + O2 = 3,4-dihydroxyphenylacetate + NAD+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxyphenylacetate,NADH:oxygen oxidoreductase (3-hydroxylating) activity (obsolete GO:0018660)","secondary_identifiers":["KEGG_REACTION:R02698"],"synonyms":[{"name":"4 HPA 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxyphenylacetate 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxyphenylacetate 3-monooxygenase activity","type":"broad"},{"name":"p-hydroxyphenylacetate 3-hydroxylase activity","type":"broad"},{"name":"p-hydroxyphenylacetate hydroxylase activity","type":"broad"}],"termid":"GO:0018660"}


id: PBO:0053187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptin","termid":"PBO:0053187"}


id: PR:000050481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2-specific protein kinase fin1 (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Ser-377, Ser-526, and Ser-698 of the amino acid sequence represented by UniProtKB:O13839. Example: UniProtKB:O13839, Ser-377/Ser-526/Ser-698, MOD:00046.","definition_xrefs":["PomBase:VW","PMID:22684255","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2-specific protein kinase fin1 (Schizosaccharomyces pombe)","termid":"PR:000050480"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fin1/Phos(S377,S526,S698)","pombase_gene_id":"SPAC19E9.02","synonyms":[{"name":"PomBase_original_PRO_term_name: G2-specific protein kinase fin1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-fin1/Phos:1","type":"exact"},{"name":"UniProtKB:O13839, Ser-377/Ser-526/Ser-698, MOD:00046","type":"narrow"},{"name":"fin1/Phos(S377,S526,S698)","type":"exact"}],"termid":"PR:000050481"}


id: PBO:0079033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 2-1","termid":"PBO:0079033"}


id: PBO:0076313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNJ2BP-COX16 readthrough","termid":"PBO:0076313"}


id: PBO:0112846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 6-2","termid":"PBO:0112846"}


id: PBO:0040792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BFSP2 antisense RNA 1","termid":"PBO:0040792"}


id: GO:0090354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of auxin metabolic process","synonyms":[{"name":"regulation of auxin metabolism","type":"exact"}],"termid":"GO:0090354"}


id: GO:0051865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein autoubiquitination","synonyms":[{"name":"protein auto-ubiquitination","type":"exact"},{"name":"protein auto-ubiquitinylation","type":"exact"},{"name":"protein autoubiquitinylation","type":"exact"},{"name":"protein self-ubiquitination","type":"exact"},{"name":"protein self-ubiquitinylation","type":"exact"}],"termid":"GO:0051865"}


id: SO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An internal RNA loop where the extent of the loop on both stands is the same size.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_internal_loop","termid":"SO:0000020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetric_RNA_internal_loop","synonyms":[{"name":"A-minor RNA motif","type":"exact"}],"termid":"SO:0000025"}


id: PBO:0071056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 58","termid":"PBO:0071056"}


id: PBO:0050131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 41","termid":"PBO:0050131"}


id: GO:0048631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle growth.","definition_xrefs":["GOC:lm","PMID:15726494","PMID:15907921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"skeletal muscle tissue growth","termid":"GO:0048630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue growth","termid":"GO:0048631"}


id: GO:0022606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the polarity of a cell along its proximal/distal axis.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of monopolar cell polarity","termid":"GO:0061162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of proximal/distal cell polarity","termid":"GO:0022606"}


id: PBO:0085706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in septin-ER tethering; interacts with ER membrane protein, Scs2p, and Shs1p, a septin ring component, at bud neck to create ER diffusion barrier; GFP-fusion protein localizes to the cell periphery, cytoplasm, bud, and bud neck; interacts with Crm1p in two-hybrid assay; YMR124W has a paralog, YLR031W, that arose from the whole genome duplication","termid":"PBO:0085706"}


id: GO:0110014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of aggregation involved in sorocarp development. Aggregation involved in sorocarp development is the process whose specific outcome is the progression of the aggregate over time, from its formation to the point when a slug is formed. Aggregate development begins in response to starvation and continues by the chemoattractant-mediated movement of cells toward each other. The aggregate is a multicellular structure that gives rise to the slug.","definition_xrefs":["GOC:rjd","PMID:28257811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of aggregation involved in sorocarp development","termid":"GO:0060176"},{"relation_name":"negatively_regulates","term_name":"aggregation involved in sorocarp development","termid":"GO:0031152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aggregation involved in sorocarp development","termid":"GO:0110014"}


id: GO:0075293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the pH conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host pH environment","synonyms":[{"name":"response of symbiont to host pH environment","type":"exact"}],"termid":"GO:0075293"}


id: GO:1901892
data:
  {"annotated_genes":["SJAG_01790","SJAG_02514","SJAG_00526","SJAG_04455","SJAG_04943","SJAG_00883","SJAG_06270","SJAG_03681","SJAG_03353","SJAG_03592","SJAG_03508","SJAG_01386","SJAG_03048","SJAG_02169","SJAG_00229"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010974"},{"annotations":[98512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[87864,97407,86872,89051,89591,95800,103360,91785,103669,106302,112031,101152,95720,88969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell septum assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of cell septum assembly","termid":"GO:1901891"},{"relation_name":"negatively_regulates","term_name":"cell septum assembly","termid":"GO:0090529"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell septum assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell septum assembly","type":"exact"},{"name":"down-regulation of cell septum assembly","type":"exact"},{"name":"downregulation of cell septum assembly","type":"exact"},{"name":"inhibition of cell septum assembly","type":"narrow"}],"termid":"GO:1901892","terms_by_termid":{"GO:0010974":null,"GO:0031030":null,"GO:1905757":null}}


id: GO:0001784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phosphorylated tyrosine residue within a protein.","definition_xrefs":["PMID:14636584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"phosphotyrosine residue binding","synonyms":[{"name":"phosphotyrosine binding","type":"related"}],"termid":"GO:0001784"}


id: GO:0102564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aurachin C epoxide + H+ + NAD(P)H = aurachin B + H2O + NAD(P).","definition_xrefs":["EC:3.3.2.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aurachin C epoxide hydrolase/isomerase activity","secondary_identifiers":["MetaCyc:RXN-15030","RHEA:48728"],"termid":"GO:0102564"}


id: PBO:0086596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression induced in cells treated with mycotoxins patulin or citrinin; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086596"}


id: GO:0006977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the stopping or reduction in rate of the cell cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response, signal transduction by p53 class mediator","termid":"GO:0030330"},{"relation_name":"is_a","term_name":"mitotic G1 DNA damage checkpoint signaling","termid":"GO:0031571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150","GO:0044772"],"is_obsolete":false,"name":"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest","synonyms":[{"name":"positive regulation of cell cycle arrest by p53-mediated DNA damage response","type":"exact"}],"termid":"GO:0006977"}


id: GO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic gene regulation mechanism that positively regulates gene expression by demethylation of cytosine residues in chromosomal CpG islands. CpG islands are genomic regions that contain a high frequency of the CG dinucleotide and are often associated with the transcription start site of genes.","definition_xrefs":["Wikipedia:Cpg_island","PMID:36150101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription initiation-coupled chromatin remodeling","termid":"GO:0045815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"positive regulation of gene expression via chromosomal CpG island demethylation","synonyms":[{"name":"DNA demethylation","type":"broad"},{"name":"DNA hypomethylation of CpG island","type":"exact"},{"name":"hypomethylation of CpG island","type":"exact"},{"name":"positive regulation of gene expression via chromosomal CpG dinucleotide demethylation","type":"exact"}],"termid":"GO:0044029"}


id: PBO:0074272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 13","termid":"PBO:0074272"}


id: PBO:0083508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CDC7/YDL153C, the catalytic subunit of a complex that regulates DNA replication","termid":"PBO:0083508"}


id: PBO:0003302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn3","termid":"PBO:0003302"}


id: PBO:0036502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin Cdc31","termid":"PBO:0036502"}


id: GO:1904551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arachidonic acid stimulus.","definition_xrefs":["PMID:16382163","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"response to arachidonic acid","termid":"GO:1904550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to arachidonic acid","termid":"GO:1904551"}


id: PBO:0054126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1492","termid":"PBO:0054126"}


id: PBO:0074452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothened, frizzled class receptor","termid":"PBO:0074452"}


id: PBO:0049254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich WD repeat containing 1","termid":"PBO:0049254"}


id: GO:0002688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte chemotaxis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte chemotaxis","synonyms":[{"name":"regulation of immune cell chemotaxis","type":"exact"},{"name":"regulation of leucocyte chemotaxis","type":"exact"}],"termid":"GO:0002688"}


id: PBO:0112849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 9-2","termid":"PBO:0112849"}


id: FYPO:0006417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the cleavage and rejoining of intermediates formed during meiotic recombination is longer than normal. All intermediates or a subset (such as a specific type or configuration of intermediate) may remain present for longer than normal.","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of resolution of meiotic recombination intermediates","synonyms":[{"name":"increased duration of joint molecule resolution","type":"exact"},{"name":"persistent meiotic joint molecules","type":"related"},{"name":"prolonged resolution of meiotic recombination intermediates","type":"exact"}],"termid":"FYPO:0006417"}


id: PBO:0047548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 7","termid":"PBO:0047548"}


id: PBO:0030807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_cortex","termid":"PBO:0030807"}


id: PBO:0027643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_alpha-galactosidase_activity","termid":"PBO:0027643"}


id: FYPO:0004773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-lysine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased vacuolar lysine level","synonyms":[{"name":"increased level of lysine in vacuole","type":"exact"},{"name":"increased vacuolar L-lysine level","type":"exact"},{"name":"increased vacuolar lysine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar lysine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004773"}


id: GO:0005243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from one cell to an adjacent cell. The gap junction can pass large solutes as well as electrical signals between cells. Gap junctions consist of two gap junction hemi-channels, or connexons, one contributed by each membrane through which the gap junction passes.","definition_xrefs":["ISBN:0815340729","GOC:dgh","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wide pore channel activity","termid":"GO:0022829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"gap junction channel activity","secondary_identifiers":["GO:0015286","GO:0015285","Reactome:R-HSA-375342","Reactome:R-HSA-375339","Reactome:R-HSA-190681","Reactome:R-HSA-375340","Reactome:R-HSA-375330"],"synonyms":[{"name":"connexin","type":"related"},{"name":"innexin","type":"narrow"},{"name":"innexin channel activity","type":"exact"},{"name":"intercellular channel","type":"broad"}],"termid":"GO:0005243"}


id: GO:0031155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reproductive fruiting body development.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of reproductive fruiting body development","synonyms":[{"name":"regulation of fruiting body formation","type":"exact"}],"termid":"GO:0031155"}


id: PBO:0090208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Msl1","termid":"PBO:0090208"}


id: GO:0008259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta ligand binding to type I receptor (obsolete GO:0008259)","synonyms":[{"name":"TGF-beta ligand binding to type I receptor","type":"exact"},{"name":"TGFbeta ligand binding to type I receptor","type":"exact"},{"name":"transforming growth factor beta ligand binding to type I receptor","type":"exact"}],"termid":"GO:0008259"}


id: FYPO:0003293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UDP-galactose transmembrane transport occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal UDP-galactose transmembrane transport","termid":"FYPO:0003292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased UDP-galactose transmembrane transport","synonyms":[{"name":"increased UDP-galactose transmembrane transport during mitotic cell cycle","type":"related"},{"name":"increased UDP-galactose transmembrane transport during vegetative growth","type":"exact"}],"termid":"FYPO:0003293"}


id: PBO:0054426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1822","termid":"PBO:0054426"}


id: PBO:0082193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldose reductase; involved in methylglyoxal, d-xylose, arabinose, and galactose metabolism; stress induced (osmotic, ionic, oxidative, heat shock, starvation and heavy metals); regulated by HOG pathway; overexpression allows xylose fermentation in strains expressing heterologous xylitol dehydrogenase and xylulokinase; protein abundance increases in response to DNA replication stress","termid":"PBO:0082193"}


id: PBO:0084633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2634 methylation of the 25S rRNA; S-adenosylmethionine-dependent; associates with precursors of the 60S ribosomal subunit; predicted to be involved in ribosome biogenesis","termid":"PBO:0084633"}


id: GO:0046835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"carbohydrate phosphorylation","termid":"GO:0046835"}


id: GO:0046336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanolamine metabolic process","termid":"GO:0006580"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"cellular biogenic amine catabolic process","termid":"GO:0042402"},{"relation_name":"is_a","term_name":"primary amino compound catabolic process","termid":"GO:1901161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ethanolamine catabolic process","synonyms":[{"name":"ethanolamine breakdown","type":"exact"},{"name":"ethanolamine catabolism","type":"exact"},{"name":"ethanolamine degradation","type":"exact"}],"termid":"GO:0046336"}


id: PBO:0067103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 145, pseudogene","termid":"PBO:0067103"}


id: GO:0009533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Unstacked thylakoids that connect the grana stacks through the stroma.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid","termid":"GO:0009534"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast stromal thylakoid","termid":"GO:0009533"}


id: GO:0071748
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["PMID:16362985","ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgA immunoglobulin complex, circulating","termid":"GO:0071746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"monomeric IgA immunoglobulin complex","synonyms":[{"name":"monomeric IgA antibody","type":"exact"},{"name":"monomeric IgA1 antibody","type":"narrow"},{"name":"monomeric IgA2 antibody","type":"narrow"}],"termid":"GO:0071748"}


id: FYPO:0007759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids lasts longer than normal in centromeric regions, continuing into anaphase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:33888556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of meiotic sister chromatid cohesion at centromere during meiosis I","synonyms":[{"name":"ectopic meiotic sister chromatid cohesion at centromere during meiosis I","type":"related"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase I","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase of meiosis I","type":"narrow"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion, centromeric, during meiosis I","type":"exact"},{"name":"increased duration of sister chromatid cohesion at centromere during meiosis I","type":"exact"},{"name":"prolonged meiotic sister chromatid cohesion at centromere during meiosis I","type":"exact"}],"termid":"FYPO:0007759"}


id: PBO:0078047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 37","termid":"PBO:0078047"}


id: PBO:0056773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 23","termid":"PBO:0056773"}


id: GO:0060902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that modulates the rate, frequency or extent of the hair cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hair cycle by BMP signaling pathway (obsolete GO:0060902)","synonyms":[{"name":"regulation of hair cycle by BMP signalling pathway","type":"exact"}],"termid":"GO:0060902"}


id: FYPO:0000445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in G1 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"cell cycle arrest in mitotic G1 phase","synonyms":[{"name":"cell cycle arrest in G1 phase during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest in mitotic G1 phase during vegetative growth","type":"exact"},{"name":"mitotic G1 phase arrest","type":"exact"},{"name":"mitotic cell cycle arrest in G1 phase","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: arrested","type":"related"}],"termid":"FYPO:0000445"}


id: SO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A retrotransposon without long terminal repeat sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon","termid":"SO:0000180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_LTR_retrotransposon","synonyms":[{"name":"non LTR retrotransposon","type":"exact"}],"termid":"SO:0000189"}


id: GO:0035976
data:
  {"annotated_genes":["SJAG_00266","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88872,104090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990243"}]},"cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex composed of proteins from the c-Fos, c-Jun, activating transcription factor (ATF) or JDP families. The subunits contain a basic leucine zipper (bZIP) domain that is essential for dimerization and DNA binding. Jun-Fos heterodimers bind preferentially to a heptamer consensus sequence (TPA responsive element (TRE)), whereas Jun-ATF dimers bind the cyclic AMP responsive element (CRE) to regulate transcription of target genes.","definition_xrefs":["PMID:9069263","GOC:rl","GOC:BHF","GOC:bf","PMID:20060892","Wikipedia:AP-1_transcription_factor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"transcription factor AP-1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AP-1 complex","type":"exact"},{"name":"AP1 complex","type":"exact"},{"name":"Activating protein 1 complex","type":"exact"},{"name":"transcription factor AP1 complex","type":"exact"}],"termid":"GO:0035976","terms_by_termid":{"GO:1990243":null}}


id: PBO:0038591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACAD9 divergent transcript","termid":"PBO:0038591"}


id: PBO:0044179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin beta like 1","termid":"PBO:0044179"}


id: PBO:0040368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 5","termid":"PBO:0040368"}


id: GO:0060860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of floral organ abscission, the controlled shedding of floral organs.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of floral organ abscission","termid":"GO:0060860"}


id: PBO:0003291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric-chelate reductase Frp2 (predicted)","termid":"PBO:0003291"}


id: PBO:0053330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 161","termid":"PBO:0053330"}


id: GO:0008695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phenylpropionate + NADH + H+ + O2 = NAD+ + cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol.","definition_xrefs":["UM-BBD_enzymeID:e0307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-phenylpropionate dioxygenase activity","secondary_identifiers":["MetaCyc:HCAMULTI-RXN","RHEA:20357","EC:1.14.12.19"],"synonyms":[{"name":"3-phenylpropanoate dioxygenase activity","type":"related"},{"name":"3-phenylpropanoate,NADH:oxygen oxidoreductase (2,3-hydroxylating) activity","type":"related"},{"name":"Hca dioxygenase activity","type":"related"},{"name":"HcaA1A2CD","type":"related"}],"termid":"GO:0008695"}


id: PBO:0081890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 840, pseudogene","termid":"PBO:0081890"}


id: GO:0007572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete age dependent decreased translational activity (obsolete GO:0007572)","synonyms":[{"name":"age dependent decreased translational activity","type":"exact"}],"termid":"GO:0007572"}


id: FYPO:0003452
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is observed in a particular location where it is not normally found.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"},{"relation_name":"output_of","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized protein","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"mislocalised protein","type":"exact"}],"termid":"FYPO:0003452","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0039109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AHNAK nucleoprotein 2","termid":"PBO:0039109"}


id: SO:0000371
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon that encodes function required for conjugation.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugative_transposon","synonyms":[{"name":"conjugative transposon","type":"exact"}],"termid":"SO:0000371"}


id: PBO:0089870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit, ubiquitin-specific protease subunit Rpn11","termid":"PBO:0089870"}


id: GO:0015755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fructose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"fructose transmembrane transport","synonyms":[{"name":"fructose transport","type":"related"}],"termid":"GO:0015755"}


id: PBO:0029244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_caffeine","termid":"PBO:0029244"}


id: SO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL9 RNA leader sequence to the 5' end of an mRNA. SL9 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL9_acceptor_site","synonyms":[{"name":"SL9 acceptor site","type":"exact"}],"termid":"SO:0001754"}


id: GO:0010849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate of ATP hydrolysis by an ATPase. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of proton-transporting ATPase activity, rotational mechanism","synonyms":[{"name":"regulation of V-type ATPase activity","type":"broad"},{"name":"regulation of hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"}],"termid":"GO:0010849"}


id: PBO:0111645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone/ATP-dependent chromatin remodeller, SMARCAD1 family Fft3","termid":"PBO:0111645"}


id: PBO:0081225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMYM4 antisense RNA 1","termid":"PBO:0081225"}


id: PBO:0090126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter regulator","termid":"PBO:0090126"}


id: PBO:0112752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 2, Agm2","termid":"PBO:0112752"}


id: GO:0051713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the cytolysis of cells in another organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytolysis in another organism (obsolete GO:0051713)","synonyms":[{"name":"down regulation of cytolysis of cells of another organism","type":"exact"},{"name":"down-regulation of cytolysis of cells of another organism","type":"exact"},{"name":"downregulation of cytolysis of cells of another organism","type":"exact"},{"name":"inhibition of cytolysis of cells of another organism","type":"narrow"},{"name":"negative regulation of cytolysis in other organism","type":"exact"},{"name":"negative regulation of cytolysis of cells of another organism","type":"exact"}],"termid":"GO:0051713"}


id: GO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way, Once recruited to an RNA polymerase III promoter by one or more other transcription factors, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete TFIIIB-type transcription factor activity (obsolete GO:0001026)","synonyms":[{"name":"RNA polymerase III recruiting transcription factor activity","type":"exact"}],"termid":"GO:0001026"}


id: PBO:0072777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC3 domain containing 1","termid":"PBO:0072777"}


id: PBO:0051140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-16 (non-functional)","termid":"PBO:0051140"}


id: GO:0106282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta,7beta-dihydroxy-5beta-cholan-24-oate + NAD+ = 3beta-hydroxy-7-oxo-5beta-cholan-24-oate + H+ + NADH.","definition_xrefs":["PMID:12917011","RHEA:42024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"isoursodeoxycholate 7-beta-dehydrogenase (NAD+) activity","termid":"GO:0106282"}


id: GO:0072037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephron. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"}


id: PBO:0091997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, LTR-associated","termid":"PBO:0091997"}


id: GO:0075040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process modulates the frequency, rate or extent of turgor formation in the symbiont appressorium.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of establishment of turgor in appressorium (obsolete GO:0075040)","synonyms":[{"name":"regulation of turgor formation in appressorium","type":"related"}],"termid":"GO:0075040"}


id: PBO:0063971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 5","termid":"PBO:0063971"}


id: GO:0004089
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109639],"is_not":false,"summary":null,"term":"GO:0004089"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogencarbonate + H+ = CO2 + H2O.","definition_xrefs":["EC:4.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"carbonate dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1237059","Reactome:R-HSA-1475435","Reactome:R-HSA-1475025","RHEA:10748","Reactome:R-HSA-1475026","Reactome:R-HSA-1237047","Reactome:R-HSA-1237081","Reactome:R-HSA-1475436","Reactome:R-HSA-1475032","Reactome:R-HSA-1237045","MetaCyc:RXN0-5224","Reactome:R-HSA-1475017","Reactome:R-HSA-1475022","Reactome:R-HSA-1475028"],"synonyms":[{"name":"anhydrase activity","type":"related"},{"name":"carbonate anhydrase activity","type":"related"},{"name":"carbonate hydro-lyase (carbon-dioxide-forming)","type":"related"},{"name":"carbonate hydro-lyase activity","type":"related"},{"name":"carbonic acid anhydrase activity","type":"related"},{"name":"carbonic anhydrase A","type":"related"},{"name":"carbonic anhydrase activity","type":"exact"},{"name":"carbonic dehydratase activity","type":"related"},{"name":"carboxyanhydrase activity","type":"related"}],"termid":"GO:0004089","terms_by_termid":{"GO:0004089":null}}


id: PBO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-11-1 (pseudogene)","termid":"PBO:0051251"}


id: PBO:0081717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 646","termid":"PBO:0081717"}


id: PBO:0052476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 2","termid":"PBO:0052476"}


id: PBO:0046160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 2","termid":"PBO:0046160"}


id: GO:0006836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter transport","synonyms":[{"name":"sodium:neurotransmitter transport","type":"narrow"}],"termid":"GO:0006836"}


id: SO:1000050
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"No effect on the state of the RNA.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000050 sequence_variant_causing_no_change_in_transcript (obsolete SO:1000050)","synonyms":[{"name":"mutation causing no change in transcript","type":"related"},{"name":"sequence variant causing no change in transcript","type":"exact"}],"termid":"SO:1000050"}


id: PBO:0086824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL033W has a paralog, YNL019C, that arose from a segmental duplication","termid":"PBO:0086824"}


id: GO:2000095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"regulates","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway, planar cell polarity pathway","synonyms":[{"name":"regulation of PCP pathway","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of Wnt-JNK signaling pathway","type":"related"},{"name":"regulation of Wnt-PCP signaling pathway","type":"related"},{"name":"regulation of Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of non-canonical Wnt signaling pathway","type":"related"}],"termid":"GO:2000095"}


id: PBO:0077915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 6","termid":"PBO:0077915"}


id: GO:0061667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of URM1 to a substrate protein via the reaction X-URM1 + S = X + S-URM1, where X is either an E2 or E3 enzyme, the X-URM1 linkage is a thioester bond, and the S-URM1 linkage is an isopeptide bond between the C-terminal amino acid of URM1 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"URM1 transferase activity","termid":"GO:0042294"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0019787","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"URM1 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061667"}


id: PBO:0054570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1972","termid":"PBO:0054570"}


id: PBO:0046624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 5","termid":"PBO:0046624"}


id: PBO:0002837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Rgf2","termid":"PBO:0002837"}


id: FYPO:0002314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-geranylgeranyl diphosphate (GGPP) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular GGPP level","termid":"FYPO:0002323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"GGPP absent from cell","synonyms":[{"name":"2-trans,6-trans,10-trans-geranylgeranyl diphosphate absent from cell","type":"exact"},{"name":"GGPP absent from cell during mitotic cell cycle","type":"related"},{"name":"GGPP absent from cell during vegetative growth","type":"exact"},{"name":"all-trans-geranylgeranyl diphosphate absent from cell","type":"exact"},{"name":"all-trans-geranylgeranyl pyrophosphate absent from cell","type":"exact"}],"termid":"FYPO:0002314"}


id: GO:0004161
data:
  {"annotated_genes":["SJAG_00580","SJAG_03352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95728,95729,105614],"is_not":false,"summary":null,"term":"GO:0004161"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate.","definition_xrefs":["EC:2.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"dimethylallyltranstransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GPPSYN-RXN","RHEA:22408","Reactome:R-HSA-191322","Reactome:R-HSA-9717834"],"synonyms":[{"name":"(2E,6E)-farnesyl diphosphate synthetase activity","type":"related"},{"name":"DMAPP:IPP-dimethylallyltransferase activity","type":"related"},{"name":"dimethylallyl-diphosphate:isopentenyl-diphosphate dimethylallyltranstransferase activity","type":"related"},{"name":"dimethylallyltransferase activity","type":"exact"},{"name":"diprenyltransferase activity","type":"related"},{"name":"geranyl diphosphate synthase","type":"exact"},{"name":"geranyl pyrophosphate synthase activity","type":"related"},{"name":"geranyl pyrophosphate synthetase activity","type":"related"},{"name":"geranyl-diphosphate synthase activity","type":"related"},{"name":"trans-farnesyl pyrophosphate synthetase activity","type":"related"}],"termid":"GO:0004161","terms_by_termid":{"GO:0004161":null}}


id: SO:0001271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A bacterial RNA with both tRNA and mRNA like properties.","direct_ancestors":[{"relation_name":"has_quality","term_name":"tmRNA_encoding","termid":"SO:0000659"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_gene","synonyms":[{"name":"tmRNA gene","type":"exact"}],"termid":"SO:0001271"}


id: PBO:0075953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAM divergent transcript","termid":"PBO:0075953"}


id: PBO:0017621
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ataxia","termid":"PBO:0017621"}


id: PBO:0057554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 670","termid":"PBO:0057554"}


id: PBO:0074633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 27","termid":"PBO:0074633"}


id: PBO:0083394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF GEM1/YAL048C","termid":"PBO:0083394"}


id: PBO:0029646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_population_at_high_temperature_(obsolete_FYPO:0002074)","termid":"PBO:0029646"}


id: GO:0006113
data:
  {"annotated_genes":["SJAG_03370","SJAG_00240","SJAG_04495","SJAG_01414","SJAG_03743","SJAG_03822","SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019660"},{"annotations":[84676,110741,94861,110742,94860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[92717],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"The anaerobic enzymatic conversion of organic compounds, especially carbohydrates, coupling the oxidation and reduction of NAD/H and the generation of adenosine triphosphate (ATP).","definition_xrefs":["ISBN:0201090910","GOC:curators","MetaCyc:Fermentation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy derivation by oxidation of organic compounds","termid":"GO:0015980"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_04495":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"fermentation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fermentation_(biochemistry)","MetaCyc:FERMENTATION-PWY"],"termid":"GO:0006113","terms_by_termid":{"GO:0019655":null,"GO:0019660":null,"GO:2001172":null}}


id: GO:0160188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a sterol from one side of a membrane to the other according to the reaction: H+(out) + sterol(in) = H+(in) + sterol(out).","definition_xrefs":["PMID:31543266"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol:proton antiporter activity (obsolete GO:0160188)","secondary_identifiers":["TC:2.A.6.6.1"],"termid":"GO:0160188"}


id: PATO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of an object that has a value that is decreased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased object quality","termid":"PATO:0002303"}


id: GO:0034693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that is formed by the association of the U11 and U12 small nuclear ribonucleoproteins.","definition_xrefs":["PMID:15146077","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U11/U12 snRNP","synonyms":[{"name":"18S U11/U12 snRNP","type":"narrow"},{"name":"snRNP U11/U12","type":"exact"}],"termid":"GO:0034693"}


id: GO:0044675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of four polypeptides which also contains tungsten, a molybdopterin guanine dinucleotide, and iron-sulfur clusters. This protein complex catalyzes the reversible conversion of CO2 and methanofuran to formylmethanofuran during methanogenesis.","definition_xrefs":["GOC:mengo_curators","PMID:8575452","PMID:8125106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"formyl-methanofuran dehydrogenase (tungsten enzyme) complex","termid":"GO:0044675"}


id: PBO:0085799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains an N-terminal epsin-like domain; proposed to be involved in the trafficking of Arn1p in the absence of ferrichrome","termid":"PBO:0085799"}


id: GO:0004208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage at the terminal bond of the motif: Asp-Xaa-Xaa-Asp-Xaa. Enzymes with this function are members of the peptidase family C14 and they appear to function in the inactivation of proteins involved in cellular repair and homeostasis during the effector stage of apoptosis.","definition_xrefs":["ISBN:0120793709"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-3 activity (obsolete GO:0004208)","synonyms":[{"name":"caspase-3 activity","type":"exact"}],"termid":"GO:0004208"}


id: GO:0009323
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the transfer of an acetyl group to ribosomal-protein alanine, forming ribosomal-protein acetylalanine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ribosomal-protein-alanine N-acetyltransferase complex (obsolete GO:0009323)","termid":"GO:0009323"}


id: PBO:0045073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 5","termid":"PBO:0045073"}


id: GO:0140679
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108479],"is_not":false,"summary":null,"term":"GO:0140679"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na(in) = ADP + phosphate + Na(out).","definition_xrefs":["PMID:9106203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type sodium transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.2.2.4","TC:3.A.1.115.1","MetaCyc:RXN-17739","RHEA:14633"],"termid":"GO:0140679","terms_by_termid":{"GO:0140679":null}}


id: GO:0071390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ecdysone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ecdysone","termid":"GO:0035075"},{"relation_name":"is_a","term_name":"cellular response to sterol","termid":"GO:0036315"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ecdysone","termid":"GO:0071390"}


id: PBO:0077583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomodulin 2","termid":"PBO:0077583"}


id: PBO:0036538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricase Uro1","termid":"PBO:0036538"}


id: GO:0004160
data:
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id: PBO:0042602
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id: PBO:0057308
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id: MOD:00079
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id: PBO:0030711
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id: GO:0031467
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id: GO:1903046
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id: GO:0010884
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id: PBO:0060051
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id: PBO:0026821
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id: GO:0097363
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id: PBO:0069242
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id: GO:2001026
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id: PBO:0011165
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id: PBO:0071741
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id: PBO:0036275
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id: GO:0070743
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id: GO:0051273
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id: GO:0140142
data:
  {"annotated_genes":["SJAG_01083","SJAG_02425","SJAG_02661","SJAG_00586","SJAG_04411","SJAG_01789","SJAG_03662","SJAG_03470","SJAG_01909","SJAG_04366","SJAG_03959","SJAG_02998","SJAG_00968","SJAG_03693","SJAG_01534","SJAG_00840","SJAG_01358"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113384,87220,92651,104598,109668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005049"},{"annotations":[99521,89530,91905,92652,89587,85584,99810,103057,110589,98693,111956,113385,88061,114805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061608"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a cargo between the nucleus and the cytoplasm by moving along with the cargo. The cargo can be either a RNA or a protein.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00586":null,"SJAG_00840":null,"SJAG_00968":null,"SJAG_01083":null,"SJAG_01358":null,"SJAG_01534":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_02425":null,"SJAG_02661":null,"SJAG_02998":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04366":null,"SJAG_04411":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"nucleocytoplasmic carrier activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090631","GO:0061717"],"synonyms":[{"name":"miRNA transporter activity","type":"narrow"},{"name":"nucleocytoplasmic importin/exportin activity","type":"exact"},{"name":"pre-miRNA transporter activity","type":"narrow"}],"termid":"GO:0140142","terms_by_termid":{"GO:0005049":null,"GO:0061608":null}}


id: FYECO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which manumycin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ manumycin A","synonyms":[{"name":"+ manu-A","type":"exact"}],"termid":"FYECO:0000372"}


id: PBO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.289","termid":"PBO:0002021"}


id: GO:0052914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine(1207) in 16S rRNA = N(2)-methylguanosine(1207) in 16S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N2-)-methyltransferase activity","termid":"GO:0008990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"16S rRNA (guanine(1207)-N(2))-methyltransferase activity","secondary_identifiers":["RHEA:42736","MetaCyc:RXN-11576"],"synonyms":[{"name":"M(2)G1207 methyltransferase activity","type":"related"}],"termid":"GO:0052914"}


id: PBO:0028837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_homologous_chromosome_pairing","termid":"PBO:0028837"}


id: PBO:0046407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of polycomb homolog 2","termid":"PBO:0046407"}


id: PBO:0080938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc activated ion channel","termid":"PBO:0080938"}


id: GO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Low molecular weight (10-45 kDa) proteins that associate with intermediate filaments by lateral binding of the filaments and have the effect of creating tight macrofilament aggregates.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete type I intermediate filament associated protein (obsolete GO:0001722)","synonyms":[{"name":"type I intermediate filament associated protein","type":"exact"}],"termid":"GO:0001722"}


id: PBO:0081327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 121","termid":"PBO:0081327"}


id: MOD:00801
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-histidine residue, homocitric acid and an eight-iron nine-sulfur cluster to L-cysteinyl-L-histidino-homocitryl octairon nonasulfide.","definition_xrefs":["PubMed:8392330","RESID:AA0394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl-L-histidino-homocitryl octairon nonasulfide","synonyms":[{"name":"CysHis-[8Fe9S]","type":"exact"},{"name":"L-cysteinyl-L-histidino-homocitryl octairon nonasulfide carbide","type":"exact"},{"name":"nitrogenase iron-iron cofactor","type":"exact"}],"termid":"MOD:00801"}


id: PBO:0003415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp103 (predicted)","termid":"PBO:0003415"}


id: PBO:0039528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 9","termid":"PBO:0039528"}


id: PBO:0043302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 19A","termid":"PBO:0043302"}


id: PR:Q9C0U6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A xylulose kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10196:SF10","PRO:DNx","OMA:SCHPO04422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylulose kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPJ732.02c","secondary_identifiers":["UniProtKB:Q9C0U6"],"synonyms":[{"name":"Spom972h-XYLB","type":"exact"},{"name":"Xylulokinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C0U6"}


id: PBO:0088827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex NOT box subunit 2","termid":"PBO:0088827"}


id: PBO:0084827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for iron-sulfur protein synthesis; performs scaffolding function during Fe/S cluster assembly; involved in Fe-S cluster assembly for both mitochondrial and cytosolic proteins; protein abundance increases under DNA replication stress; ISU2 has a paralog, ISU1, that arose from the whole genome duplication; isu1 isu2 double mutant is inviable; human homolog ISCU implicated in mitochondrial myopathy, can complement isu1 isu2 double mutant","termid":"PBO:0084827"}


id: GO:0140376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving a signal and transmitting it in a cell to initiate an innate immune response.","definition_xrefs":["PMID:31415752","PMID:28921463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"innate immune receptor activity","termid":"GO:0140376"}


id: FYPO:0001387
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115349,115350,115351,115538],"is_not":false,"summary":null,"term":"FYPO:0001387"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells are grown at a temperature higher than standard.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability at high temperature","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_03351","SJAG_04464","SJAG_01956"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased viability at high temperature","type":"exact"},{"name":"loss of cell population viability at high temperature","type":"exact"},{"name":"loss of viability at restrictive temperature","type":"related"},{"name":"reduced viability at high temperature","type":"exact"}],"termid":"FYPO:0001387","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0001387":null}}


id: PBO:0041173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B and T lymphocyte associated","termid":"PBO:0041173"}


id: PBO:0074706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 72","termid":"PBO:0074706"}


id: PBO:0063333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2","termid":"PBO:0063333"}


id: FYPO:0007707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a GTPase activator is decreased.","definition_xrefs":["PomBase:mah","PMID:30279276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased GTPase activator activity","synonyms":[{"name":"decreased GAP activity","type":"exact"},{"name":"reduced GTPase activator activity","type":"exact"}],"termid":"FYPO:0007707"}


id: GO:0031393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostaglandin biosynthetic process","termid":"GO:0031392"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"negatively_regulates","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of prostaglandin biosynthetic process","synonyms":[{"name":"down regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"down-regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"downregulation of prostaglandin biosynthetic process","type":"exact"},{"name":"inhibition of prostaglandin biosynthetic process","type":"narrow"},{"name":"negative regulation of prostaglandin anabolism","type":"exact"},{"name":"negative regulation of prostaglandin biosynthesis","type":"exact"},{"name":"negative regulation of prostaglandin formation","type":"exact"},{"name":"negative regulation of prostaglandin synthesis","type":"exact"}],"termid":"GO:0031393"}


id: PBO:0109122
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoside Hydrolase family Sixteen","termid":"PBO:0109122"}


id: FYPO:0001768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C38 residue in a tRNA-Asp molecule is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abolished tRNA-Asp C38 methylation","synonyms":[{"name":"abolished tRNA-Asp C38 methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA-Asp C38 methylation during vegetative growth","type":"exact"},{"name":"abolished tRNA-Asp methylation on C38","type":"exact"},{"name":"tRNA-Asp C38 methylation abolished","type":"exact"}],"termid":"FYPO:0001768"}


id: PR:Q9P7S8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23G3.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rax1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.05c","synonyms":[{"name":"Spom972h-SPAC23G3.05c","type":"exact"}],"termid":"PR:Q9P7S8"}


id: FYECO:0000420
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ferrichrome was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ferrichrome","termid":"FYECO:0000420"}


id: PBO:0087589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; has mRNA binding activity","termid":"PBO:0087589"}


id: PBO:0003281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (predicted)","termid":"PBO:0003281"}


id: PBO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid adenoma","termid":"PBO:0005836"}


id: PBO:0048801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 1","termid":"PBO:0048801"}


id: PBO:0036395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human MAPK organizer 1 (MORG1) family Wdr83 (predicted)","termid":"PBO:0036395"}


id: PBO:0002915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-tyrosine phosphatase Pyp3","termid":"PBO:0002915"}


id: PBO:0054102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1461","termid":"PBO:0054102"}


id: GO:0070668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of mast cell proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte proliferation","termid":"GO:0070665"},{"relation_name":"is_a","term_name":"regulation of mast cell proliferation","termid":"GO:0070666"},{"relation_name":"positively_regulates","term_name":"mast cell proliferation","termid":"GO:0070662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell proliferation","synonyms":[{"name":"activation of mast cell proliferation","type":"narrow"},{"name":"stimulation of mast cell proliferation","type":"narrow"},{"name":"up regulation of mast cell proliferation","type":"exact"},{"name":"up-regulation of mast cell proliferation","type":"exact"},{"name":"upregulation of mast cell proliferation","type":"exact"}],"termid":"GO:0070668"}


id: PBO:0077320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 59","termid":"PBO:0077320"}


id: PBO:0091723
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDK1","termid":"PBO:0091723"}


id: PBO:0058177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4472-1","termid":"PBO:0058177"}


id: PBO:0082802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of the arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1 70K protein; protein abundance increases in response to DNA replication stress","termid":"PBO:0082802"}


id: PBO:0051004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 pseudogene 1","termid":"PBO:0051004"}


id: GO:0097183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and coagulation factor XI (F11); formation of the complex inhibits the serine protease activity of coagulation factor XI.","definition_xrefs":["PMID:2844223","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein C inhibitor-coagulation factor XI complex","synonyms":[{"name":"PCI-coagulation factor XI complex","type":"exact"},{"name":"SERPINA5-coagulation factor XI complex","type":"exact"},{"name":"plasma serine protease inhibitor-coagulation factor XI complex","type":"exact"},{"name":"protein C inhibitor-F11 complex","type":"exact"},{"name":"serpin A5-coagulation factor XI complex","type":"exact"}],"termid":"GO:0097183"}


id: PBO:0035996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_mononucleate_aseptate_vegetative_cell","termid":"PBO:0035996"}


id: PBO:0056937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-2","termid":"PBO:0056937"}


id: PBO:0091812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP citrate synthase subunit 1","termid":"PBO:0091812"}


id: PBO:0085524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S25, no bacterial homolog; RPS25B has a paralog, RPS25A, that arose from the whole genome duplication","termid":"PBO:0085524"}


id: FYPO:0003642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of urease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal urease activity","termid":"FYPO:0003642"}


id: PR:P87054
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 15 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.06","synonyms":[{"name":"Spom972h-mug15","type":"exact"}],"termid":"PR:P87054"}


id: FYPO:0006816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K9 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006816"}


id: GO:0061810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose without proceeding through a cyclic ADP-ribose intermediate.","definition_xrefs":["PMID:11866528","GOC:pad","GOC:dph","GOC:PARL","GOC:pde"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD glycohydrolase activity (obsolete GO:0061810)","termid":"GO:0061810"}


id: GO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A generic term for parts of cells prepared by disruptive biochemical techniques.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete cell fraction (obsolete GO:0000267)","synonyms":[{"name":"cell fraction","type":"exact"}],"termid":"GO:0000267"}


id: GO:0005452
data:
  {"annotated_genes":["SJAG_00612","SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107096],"is_not":false,"summary":null,"term":"GO:0005452"},{"annotations":[98993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: inorganic anion(out) + solute(in) = inorganic anion (in) + solute(out).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"solute:inorganic anion antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-427666","Reactome:R-HSA-5656248","Reactome:R-HSA-1247665","Reactome:R-HSA-425482","Reactome:R-HSA-425577","Reactome:R-HSA-1237038","Reactome:R-HSA-5627737"],"synonyms":[{"name":"inorganic anion exchanger activity","type":"exact"}],"termid":"GO:0005452","terms_by_termid":{"GO:0005452":null,"GO:0140987":null}}


id: PBO:0041772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 11","termid":"PBO:0041772"}


id: PBO:0045850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 40","termid":"PBO:0045850"}


id: GO:0031900
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the chromoplast envelope.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid outer membrane","termid":"GO:0009527"},{"relation_name":"is_a","term_name":"chromoplast membrane","termid":"GO:0046862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromoplast outer membrane","termid":"GO:0031900"}


id: PBO:0018153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Nts1","termid":"PBO:0018153"}


id: PBO:0067802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 104","termid":"PBO:0067802"}


id: GO:0000745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The net movement of nuclei towards one another, leading to the bilateral transfer of genetic material in organisms undergoing conjugation without cellular fusion.","definition_xrefs":["GOC:mah","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"karyogamy involved in conjugation with mutual genetic exchange","termid":"GO:0000744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"nuclear migration involved in conjugation with mutual genetic exchange","synonyms":[{"name":"nuclear exchange during conjugation without cellular fusion","type":"related"},{"name":"nuclear migration involved in conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000745"}


id: GO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class I PI3K activated via heterotrimeric G-proteins.","definition_xrefs":["PMID:11050418"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-4-phosphate kinase, class IB (obsolete GO:0004433)","synonyms":[{"name":"1-phosphatidylinositol-4-phosphate kinase, class IB","type":"exact"}],"termid":"GO:0004433"}


id: PBO:0004869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator Bag101 (predicted)","termid":"PBO:0004869"}


id: PBO:0080348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 112 pseudogene","termid":"PBO:0080348"}


id: GO:0099638
data:
  {"annotated_genes":["SJAG_03756","SJAG_02282","SJAG_01809","SJAG_03915","SJAG_04565","SJAG_02177","SJAG_00379","SJAG_02912","SJAG_04609"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87427,88415,91034,97264,103495,108917,109140,114605,114982],"is_not":false,"summary":null,"term":"GO:0099638"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the endosome to the plasma membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"endocytic recycling","termid":"GO:0032456"},{"relation_name":"is_a","term_name":"establishment of protein localization to plasma membrane","termid":"GO:0061951"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02912":null,"SJAG_03756":null,"SJAG_03915":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"endosome to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099638","terms_by_termid":{"GO:0099638":null}}


id: PBO:0068204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 511","termid":"PBO:0068204"}


id: PBO:0065237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 5","termid":"PBO:0065237"}


id: PBO:0078612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64C","termid":"PBO:0078612"}


id: GO:1901171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of naphthalene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00082"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene biosynthetic process (obsolete GO:1901171)","synonyms":[{"name":"naphthalene anabolism","type":"exact"},{"name":"naphthalene biosynthesis","type":"exact"},{"name":"naphthalene formation","type":"exact"},{"name":"naphthalene synthesis","type":"exact"}],"termid":"GO:1901171"}


id: GO:0050351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + trimetaphosphate = 2 H+ + triphosphate.","definition_xrefs":["RHEA:11088","EC:3.6.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"trimetaphosphatase activity","secondary_identifiers":["MetaCyc:TRIMETAPHOSPHATASE-RXN","KEGG_REACTION:R02504"],"synonyms":[{"name":"inorganic trimetaphosphatase activity","type":"related"},{"name":"trimetaphosphate hydrolase activity","type":"related"}],"termid":"GO:0050351"}


id: PBO:0049300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 3","termid":"PBO:0049300"}


id: PBO:0080739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing transcription regulator 1","termid":"PBO:0080739"}


id: PBO:0045770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 1 pseudogene 1","termid":"PBO:0045770"}


id: PBO:0002533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA30 protein (predicted)","termid":"PBO:0002533"}


id: FYPO:0007176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abolished during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane at cell division site during mitosis","synonyms":[{"name":"abolished protein localisation to plasma membrane at cell division site during mitosis","type":"exact"},{"name":"abolished protein localization in plasma membrane at cell division site during mitosis","type":"exact"},{"name":"abolished protein localization to cell membrane at cell division site during mitosis","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during mitotic M phase","type":"related"},{"name":"abolished protein localization to plasma membrane at cell division site during mitotic nuclear division","type":"exact"},{"name":"protein localization to plasma membrane at cell division site abolished during mitosis","type":"exact"}],"termid":"FYPO:0007176"}


id: FYECO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiamine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiamine","termid":"FYECO:0000106"}


id: PBO:0069117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 366, pseudogene","termid":"PBO:0069117"}


id: GO:0044840
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lysosome-related organelle contained within the intestinal cells of the nematode C. elegans. Gut granules are acidified, birefringent, autofluorescent, and contain the vacuolar H+-ATPase. They also serve as sites of cellular zinc storage.","definition_xrefs":["GOC:kmv","PMID:24204312","PMID:22916203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"gut granule","termid":"GO:0044840"}


id: GO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the smaller branches of an axon that emanate from the main axon cylinder.","definition_xrefs":["NIF_Subcellular:sao1470140754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon collateral","termid":"GO:0044303"}


id: GO:0043036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Plant storage body for amylose and amylopectin, 1-100um in diameter. Also contains small amounts of enzymes, amino acids, lipids and nucleic acids. The shape of the grain varies widely amongst species, but is often spherical or disk-shaped.","definition_xrefs":["GOC:jl","PMID:11217978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"starch grain","synonyms":[{"name":"starch granule","type":"exact"}],"termid":"GO:0043036"}


id: GO:0050006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose = 6-O-alpha-D-glucopyranosyl-D-fructofuranose.","definition_xrefs":["MetaCyc:ISOMALTULOSE-SYNTHASE-RXN","EC:5.4.99.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isomaltulose synthase activity","secondary_identifiers":["RHEA:24032"],"synonyms":[{"name":"isomaltulose synthetase activity","type":"related"},{"name":"sucrose alpha-glucosyltransferase activity","type":"related"},{"name":"sucrose glucosylmutase activity","type":"related"},{"name":"trehalulose synthase activity","type":"related"}],"termid":"GO:0050006"}


id: PBO:0085671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in outer spore wall assembly; likely involved directly in dityrosine layer assembly; putative GPI-anchored protein; overexpression causes growth arrest;; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; SHE10 has a paralog, OSW7/YFR039C, that arose from the whole genome duplication; paralogs are redundant for spore wall dityrosine assembly","termid":"PBO:0085671"}


id: PR:O74561
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC970.08 gene.","definition_xrefs":["UniProtKB:O74561","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized inositol polyphosphate kinase C970.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.08","synonyms":[{"name":"Spom972h-SPCC970.08","type":"exact"}],"termid":"PR:O74561"}


id: PBO:0053907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1201","termid":"PBO:0053907"}


id: PBO:0080677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHAMM pseudogene 4","termid":"PBO:0080677"}


id: FYPO:0000591
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000595"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transposition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal transposition","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"abnormal transposable element transposition","type":"exact"},{"name":"abnormal transposition during mitotic cell cycle","type":"related"},{"name":"abnormal transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: abnormal","type":"related"}],"termid":"FYPO:0000591","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0000595":null,"FYPO_EXT:0000001":null}}


id: GO:1900580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (17Z)-protosta-17(20),24-dien-3beta-ol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"(17Z)-protosta-17(20),24-dien-3beta-ol metabolic process","termid":"GO:1900579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0019748","GO:0044248","GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"(17Z)-protosta-17(20),24-dien-3beta-ol catabolic process","synonyms":[{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol breakdown","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol catabolism","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol degradation","type":"exact"}],"termid":"GO:1900580"}


id: GO:0030874
data:
  {"annotated_genes":["SJAG_05180","SJAG_01005","SJAG_05237","SJAG_03923","SJAG_03603","SJAG_02723","SJAG_03905","SJAG_01509","SJAG_04210","SJAG_02879"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88492,91454,94693,99040,102766,103919],"is_not":false,"summary":null,"term":"GO:0030874"},{"annotations":[97300,95412,111402,115376],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030875"}]},"cv_name":"cellular_component","definition":"The portion of nuclear chromatin associated with the nucleolus; includes the DNA encoding the ribosomal RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01005":null,"SJAG_01509":null,"SJAG_02723":null,"SJAG_02879":null,"SJAG_03603":null,"SJAG_03905":null,"SJAG_03923":null,"SJAG_04210":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005730","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"nucleolar chromatin","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"termid":"GO:0030874","terms_by_termid":{"GO:0030874":null,"GO:0030875":null}}


id: GO:1902027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cartilage condensation.","definition_xrefs":["GOC:TermGenie","PMID:17202865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cartilage condensation","termid":"GO:1902026"},{"relation_name":"positively_regulates","term_name":"cartilage condensation","termid":"GO:0001502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cartilage condensation","synonyms":[{"name":"activation of cartilage condensation","type":"narrow"},{"name":"up regulation of cartilage condensation","type":"exact"},{"name":"up-regulation of cartilage condensation","type":"exact"},{"name":"upregulation of cartilage condensation","type":"exact"}],"termid":"GO:1902027"}


id: PBO:0070509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 8","termid":"PBO:0070509"}


id: PBO:0028556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_import_into_nucleus","termid":"PBO:0028556"}


id: FYPO:0001224
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two nuclei and one septum.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete binucleate monoseptate cell (obsolete FYPO:0001224)","synonyms":[{"name":"binucleate monoseptate cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001224"}


id: PBO:0054608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2013","termid":"PBO:0054608"}


id: GO:0010462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of light-activated voltage-gated calcium channel activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of light-activated channel activity","termid":"GO:0016061"},{"relation_name":"is_a","term_name":"regulation of voltage-gated calcium channel activity","termid":"GO:1901385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of light-activated voltage-gated calcium channel activity","termid":"GO:0010462"}


id: PR:O13839
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fin1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2-specific protein kinase fin1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19E9.02","synonyms":[{"name":"Spom972h-fin1","type":"exact"}],"termid":"PR:O13839"}


id: GO:0002944
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin Kand cyclin-dependent kinase 12 (CDK12). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:22012619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin K-CDK12 complex","synonyms":[{"name":"CycK/Cdk12 complex","type":"related"}],"termid":"GO:0002944"}


id: PBO:0084970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(+)-dependent glutamate dehydrogenase; degrades glutamate to ammonia and alpha-ketoglutarate; expression sensitive to nitrogen catabolite repression and intracellular ammonia levels; genetically interacts with GDH3 by suppressing stress-induced apoptosis","termid":"PBO:0084970"}


id: GO:0062102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of a female germline stem cell to produce two germline stem cells of the same type as the parent.","definition_xrefs":["GOC:ha","PMID:30248087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell symmetric division","termid":"GO:0098729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germline stem cell symmetric division","termid":"GO:0062102"}


id: PBO:0044200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin K","termid":"PBO:0044200"}


id: PBO:0047270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member B","termid":"PBO:0047270"}


id: PBO:0046820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA core complex associated protein 24","termid":"PBO:0046820"}


id: FYPO:0006984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript synthesized on a DNA template by RNA polymerase III is longer than normal due to transcription beyond the normal termination site.","definition_xrefs":["PMID:31294478","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcriptional readthrough","termid":"FYPO:0003049"},{"relation_name":"output_of","term_name":"abnormal termination of RNA polymerase III transcription","termid":"FYPO:0006983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000294"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003048"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0003048","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"increased transcriptional readthrough at RNA polymerase III-transcribed genes","synonyms":[{"name":"3'-extended transcript at RNA polymerase III-transcribed genes","type":"related"},{"name":"increased transcript length by 3' extension of RNA polymerase III-transcribed genes","type":"related"},{"name":"increased transcript length due to transcriptional readthrough at RNA polymerase III-transcribed genes","type":"exact"},{"name":"poly(A) readthrough at RNA polymerase III-transcribed genes","type":"related"}],"termid":"FYPO:0006984"}


id: FYPO:0008038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitosis in which trimethylation of lysine at position 4 of histone H3 does not occur.","direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 trimethylation during vegetative growth","termid":"FYPO:0004126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone H3-K4 trimethylation during mitosis","termid":"FYPO:0008038"}


id: PBO:0057897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3199-2","termid":"PBO:0057897"}


id: PBO:0040056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 4","termid":"PBO:0040056"}


id: FYPO:0004784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"},{"relation_name":"is_a","term_name":"decreased protein methyltransferase activity","termid":"FYPO:0005725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased histone methyltransferase activity","synonyms":[{"name":"reduced histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0004784"}


id: GO:0035439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate = halima-5(6),13-dien-15-yl diphosphate.","definition_xrefs":["EC:5.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003824","GO:0009975","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"halimadienyl-diphosphate synthase activity","secondary_identifiers":["RHEA:25621"],"synonyms":[{"name":"halima-5(6),13-dien-15-yl-diphosphate lyase (cyclizing)","type":"related"},{"name":"halimadienyl diphosphate synthase activity","type":"related"}],"termid":"GO:0035439"}


id: PBO:0040585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-secretase 1","termid":"PBO:0040585"}


id: PBO:0082246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of succinyl-CoA ligase; succinyl-CoA ligase is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate; phosphorylated","termid":"PBO:0082246"}


id: PBO:0049595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 13","termid":"PBO:0049595"}


id: PR:O94512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC646.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.08c","synonyms":[{"name":"Spom972h-SPBC646.08c","type":"exact"}],"termid":"PR:O94512"}


id: PBO:0041362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 3","termid":"PBO:0041362"}


id: PBO:0051058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3-10","termid":"PBO:0051058"}


id: GO:0018172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of protein tyrosine to peptidyl-L-3',4',5'-dihydroxyphenylalanine.","definition_xrefs":["RESID:AA0263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine hydroxylation","termid":"GO:0018336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine biosynthetic process from peptidyl-tyrosine","synonyms":[{"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018172"}


